orthanc: Core/DicomParsing/FromDcmtkBridge.cpp annotate

annotate Core/DicomParsing/FromDcmtkBridge.cpp @ 2573:3372c5255333 jobs

StoreScuJob, Orthanc Explorer for jobs

author	Sebastien Jodogne <s.jodogne@gmail.com>
date	Wed, 09 May 2018 17:56:14 +0200
parents	ea63d9f90377
children	47d812308d63

rev	line source
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1 /**
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	2 * Orthanc - A Lightweight, RESTful DICOM Store
1900 b1291df2f780 2016 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1876 diff changeset	3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288 6e7e5ed91c2d upgrade to year 2015 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1147 diff changeset	4 * Department, University Hospital of Liege, Belgium
2447 878b59270859 upgrade to year 2018 Sebastien Jodogne <s.jodogne@gmail.com> parents: 2431 diff changeset	5 * Copyright (C) 2017-2018 Osimis S.A., Belgium
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	6 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	7 * This program is free software: you can redistribute it and/or
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	8 * modify it under the terms of the GNU General Public License as
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	9 * published by the Free Software Foundation, either version 3 of the
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	10 * License, or (at your option) any later version.
136 fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	11 *
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	12 * In addition, as a special exception, the copyright holders of this
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	13 * program give permission to link the code of its release with the
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	15 * that use the same license as the "OpenSSL" library), and distribute
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	16 * the linked executables. You must obey the GNU General Public License
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	17 * in all respects for all of the code used other than "OpenSSL". If you
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	18 * modify file(s) with this exception, you may extend this exception to
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	19 * your version of the file(s), but you are not obligated to do so. If
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	20 * you do not wish to do so, delete this exception statement from your
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	21 * version. If you delete this exception statement from all source files
fe180eae201d openssl exception Sebastien Jodogne <s.jodogne@gmail.com> parents: 122 diff changeset	22 * in the program, then also delete it here.
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	23 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	24 * This program is distributed in the hope that it will be useful, but
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	25 * WITHOUT ANY WARRANTY; without even the implied warranty of
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	27 * General Public License for more details.
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	28 *
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	29 * You should have received a copy of the GNU General Public License
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	31 **/
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	32
448 9d830dcc7730 missing copyright information Sebastien Jodogne <s.jodogne@gmail.com> parents: 419 diff changeset	33
2382 7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	34 #include "../PrecompiledHeaders.h"
824 a811bdf8b8eb precompiled headers Sebastien Jodogne <s.jodogne@gmail.com> parents: 799 diff changeset	35
71 aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	36 #ifndef NOMINMAX
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	37 #define NOMINMAX
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	38 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	39
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	40 #if !defined(ORTHANC_SANDBOXED)
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	41 # error The macro ORTHANC_SANDBOXED must be defined
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	42 #endif
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	43
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	44 #include "FromDcmtkBridge.h"
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	45 #include "ToDcmtkBridge.h"
2382 7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	46 #include "../Logging.h"
7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	47 #include "../Toolbox.h"
7284093111b0 big reorganization to cleanly separate framework vs. server Sebastien Jodogne <s.jodogne@gmail.com> parents: 2381 diff changeset	48 #include "../OrthancException.h"
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	49
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	50 #if ORTHANC_SANDBOXED == 0
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	51 # include "../TemporaryFile.h"
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	52 #endif
4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	53
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	54 #include <list>
71 aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	55 #include <limits>
aa65ced5f0f0 fix for visual studio jodogne parents: 62 diff changeset	56
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	57 #include <boost/lexical_cast.hpp>
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	58 #include <boost/filesystem.hpp>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	59 #include <boost/algorithm/string/predicate.hpp>
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	60 #include <boost/algorithm/string/join.hpp>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	61
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	62 #include <dcmtk/dcmdata/dcdeftag.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	63 #include <dcmtk/dcmdata/dcdicent.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	64 #include <dcmtk/dcmdata/dcdict.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	65 #include <dcmtk/dcmdata/dcfilefo.h>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	66 #include <dcmtk/dcmdata/dcostrmb.h>
b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	67 #include <dcmtk/dcmdata/dcpixel.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	68 #include <dcmtk/dcmdata/dcuid.h>
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	69 #include <dcmtk/dcmdata/dcistrmb.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	70
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	71 #include <dcmtk/dcmdata/dcvrae.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	72 #include <dcmtk/dcmdata/dcvras.h>
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	73 #include <dcmtk/dcmdata/dcvrat.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	74 #include <dcmtk/dcmdata/dcvrcs.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	75 #include <dcmtk/dcmdata/dcvrda.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	76 #include <dcmtk/dcmdata/dcvrds.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	77 #include <dcmtk/dcmdata/dcvrdt.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	78 #include <dcmtk/dcmdata/dcvrfd.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	79 #include <dcmtk/dcmdata/dcvrfl.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	80 #include <dcmtk/dcmdata/dcvris.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	81 #include <dcmtk/dcmdata/dcvrlo.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	82 #include <dcmtk/dcmdata/dcvrlt.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	83 #include <dcmtk/dcmdata/dcvrpn.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	84 #include <dcmtk/dcmdata/dcvrsh.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	85 #include <dcmtk/dcmdata/dcvrsl.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	86 #include <dcmtk/dcmdata/dcvrss.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	87 #include <dcmtk/dcmdata/dcvrst.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	88 #include <dcmtk/dcmdata/dcvrtm.h>
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	89 #include <dcmtk/dcmdata/dcvrui.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	90 #include <dcmtk/dcmdata/dcvrul.h>
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	91 #include <dcmtk/dcmdata/dcvrus.h>
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	92 #include <dcmtk/dcmdata/dcvrut.h>
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	93
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	94 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	95 # include <EmbeddedResources.h>
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	96 #endif
682 efc4928be6fb Recover pixel data for more transfer syntaxes (notably JPEG) Sebastien Jodogne <s.jodogne@gmail.com> parents: 677 diff changeset	97
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	98 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	99 # include <dcmtk/dcmjpeg/djdecode.h>
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	100 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	101
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	102 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	103 # include <dcmtk/dcmjpls/djdecode.h>
1930 1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	104 #endif
1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	105
1c147c3c3121 fix static builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 1929 diff changeset	106
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	107 namespace Orthanc
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	108 {
285 4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	109 static inline uint16_t GetCharValue(char c)
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	110 {
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	111 if (c >= '0' && c <= '9')
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	112 return c - '0';
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	113 else if (c >= 'a' && c <= 'f')
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	114 return c - 'a' + 10;
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	115 else if (c >= 'A' && c <= 'F')
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	116 return c - 'A' + 10;
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	117 else
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	118 return 0;
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	119 }
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	120
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	121 static inline uint16_t GetTagValue(const char* c)
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	122 {
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	123 return ((GetCharValue(c[0]) << 12) +
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	124 (GetCharValue(c[1]) << 8) +
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	125 (GetCharValue(c[2]) << 4) +
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	126 GetCharValue(c[3]));
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	127 }
4031f73fe0e4 access to the raw dicom tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 176 diff changeset	128
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	129
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	130 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	131 static void LoadEmbeddedDictionary(DcmDataDictionary& dictionary,
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	132 EmbeddedResources::FileResourceId resource)
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	133 {
2017 08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	134 std::string content;
08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	135 EmbeddedResources::GetFileResource(content, resource);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	136
2513 97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	137 #if ORTHANC_SANDBOXED == 0
2143 fd5875662670 creation of namespace SystemToolbox Sebastien Jodogne <s.jodogne@gmail.com> parents: 2142 diff changeset	138 TemporaryFile tmp;
2017 08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	139 tmp.Write(content);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	140
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	141 if (!dictionary.loadDictionary(tmp.GetPath().c_str()))
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	142 {
2017 08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	143 LOG(ERROR) << "Cannot read embedded dictionary. Under Windows, make sure that "
08ce34cfacad refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 2007 diff changeset	144 << "your TEMP directory does not contain special characters.";
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	145 throw OrthancException(ErrorCode_InternalError);
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	146 }
2513 97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	147 #else
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	148 if (!dictionary.loadFromMemory(content))
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	149 {
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	150 LOG(ERROR) << "Cannot read embedded dictionary. Under Windows, make sure that "
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	151 << "your TEMP directory does not contain special characters.";
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	152 throw OrthancException(ErrorCode_InternalError);
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	153 }
97a74f0eac7a loading DICOM dictionaries in sandboxed environments Sebastien Jodogne <s.jodogne@gmail.com> parents: 2512 diff changeset	154 #endif
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	155 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	156
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	157 #else
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	158 static void LoadExternalDictionary(DcmDataDictionary& dictionary,
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	159 const std::string& directory,
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	160 const std::string& filename)
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	161 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	162 boost::filesystem::path p = directory;
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	163 p = p / filename;
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	164
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	165 LOG(WARNING) << "Loading the external DICOM dictionary " << p;
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	166
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	167 if (!dictionary.loadDictionary(p.string().c_str()))
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	168 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	169 throw OrthancException(ErrorCode_InternalError);
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	170 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	171 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	172 #endif
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	173
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	174
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	175 namespace
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	176 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	177 class DictionaryLocker
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	178 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	179 private:
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	180 DcmDataDictionary& dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	181
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	182 public:
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	183 DictionaryLocker() : dictionary_(dcmDataDict.wrlock())
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	184 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	185 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	186
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	187 ~DictionaryLocker()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	188 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	189 dcmDataDict.unlock();
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	190 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	191
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	192 DcmDataDictionary& operator*()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	193 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	194 return dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	195 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	196
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	197 DcmDataDictionary* operator->()
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	198 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	199 return &dictionary_;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	200 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	201 };
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	202
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	203
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	204 #define DCMTK_TO_CTYPE_CONVERTER(converter, cType, dcmtkType, getter) \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	205 \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	206 struct converter \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	207 { \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	208 typedef cType CType; \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	209 \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	210 static bool Apply(CType& result, \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	211 DcmElement& element, \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	212 size_t i) \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	213 { \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	214 return dynamic_cast<dcmtkType&>(element).getter(result, i).good(); \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	215 } \
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	216 };
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	217
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	218 DCMTK_TO_CTYPE_CONVERTER(DcmtkToSint32Converter, Sint32, DcmSignedLong, getSint32)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	219 DCMTK_TO_CTYPE_CONVERTER(DcmtkToSint16Converter, Sint16, DcmSignedShort, getSint16)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	220 DCMTK_TO_CTYPE_CONVERTER(DcmtkToUint32Converter, Uint32, DcmUnsignedLong, getUint32)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	221 DCMTK_TO_CTYPE_CONVERTER(DcmtkToUint16Converter, Uint16, DcmUnsignedShort, getUint16)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	222 DCMTK_TO_CTYPE_CONVERTER(DcmtkToFloat32Converter, Float32, DcmFloatingPointSingle, getFloat32)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	223 DCMTK_TO_CTYPE_CONVERTER(DcmtkToFloat64Converter, Float64, DcmFloatingPointDouble, getFloat64)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	224
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	225
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	226 template <typename F>
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	227 static DicomValue* ApplyDcmtkToCTypeConverter(DcmElement& element)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	228 {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	229 F f;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	230 typename F::CType value;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	231
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	232 if (element.getLength() > sizeof(typename F::CType)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	233 && (element.getLength() % sizeof(typename F::CType)) == 0)
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	234 {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	235 size_t count = element.getLength() / sizeof(typename F::CType);
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	236 std::vector<std::string> strings;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	237 for (size_t i = 0; i < count; i++) {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	238 if (f.Apply(value, element, i)) {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	239 strings.push_back(boost::lexical_cast<std::string>(value));
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	240 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	241 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	242 return new DicomValue(boost::algorithm::join(strings, "\\"), false);
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	243 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	244 else if (f.Apply(value, element, 0)) {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	245 return new DicomValue(boost::lexical_cast<std::string>(value), false);
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	246 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	247 else {
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	248 return new DicomValue;
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	249 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	250 }
ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	251
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	252 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	253
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	254
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	255 void FromDcmtkBridge::InitializeDictionary(bool loadPrivateDictionary)
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	256 {
2296 17e8e8e1ff3d log dcmtk version Sebastien Jodogne <s.jodogne@gmail.com> parents: 2287 diff changeset	257 LOG(INFO) << "Using DCTMK version: " << DCMTK_VERSION_NUMBER;
17e8e8e1ff3d log dcmtk version Sebastien Jodogne <s.jodogne@gmail.com> parents: 2287 diff changeset	258
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	259 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	260 DictionaryLocker locker;
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	261
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	262 locker->clear();
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	263
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	264 #if DCMTK_USE_EMBEDDED_DICTIONARIES == 1
2528 832217e4e872 old warnings turned into info Sebastien Jodogne <s.jodogne@gmail.com> parents: 2522 diff changeset	265 LOG(INFO) << "Loading the embedded dictionaries";
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	266 /**
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	267 * Do not load DICONDE dictionary, it breaks the other tags. The
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	268 * command "strace storescu 2>&1 \|grep dic" shows that DICONDE
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	269 * dictionary is not loaded by storescu.
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	270 **/
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	271 //LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_DICONDE);
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	272
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	273 LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_DICOM);
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	274
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	275 if (loadPrivateDictionary)
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	276 {
2152 cbebc5d072b0 Use of DCMTK 3.6.1 dictionary of private tags in standalone builds Sebastien Jodogne <s.jodogne@gmail.com> parents: 2151 diff changeset	277 LOG(INFO) << "Loading the embedded dictionary of private tags";
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	278 LoadEmbeddedDictionary(*locker, EmbeddedResources::DICTIONARY_PRIVATE);
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	279 }
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	280 else
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	281 {
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	282 LOG(INFO) << "The dictionary of private tags has not been loaded";
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	283 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	284
2364 ae50eccd41b7 compilation succeeds on OpenBSD jodogne parents: 2296 diff changeset	285 #elif defined(__linux__) \|\| defined(__FreeBSD_kernel__) \|\| defined(__FreeBSD__) \|\| defined(__OpenBSD__)
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	286 std::string path = DCMTK_DICTIONARY_DIR;
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	287
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	288 const char* env = std::getenv(DCM_DICT_ENVIRONMENT_VARIABLE);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	289 if (env != NULL)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	290 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	291 path = std::string(env);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	292 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	293
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	294 LoadExternalDictionary(*locker, path, "dicom.dic");
2151 8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	295
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	296 if (loadPrivateDictionary)
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	297 {
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	298 LoadExternalDictionary(*locker, path, "private.dic");
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	299 }
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	300 else
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	301 {
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	302 LOG(INFO) << "The dictionary of private tags has not been loaded";
8cbb55089a1d New configuration option: "LoadPrivateDictionary" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2143 diff changeset	303 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	304
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	305 #else
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	306 #error Support your platform here
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	307 #endif
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	308 }
1656 d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	309
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	310 /* make sure data dictionary is loaded */
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	311 if (!dcmDataDict.isDictionaryLoaded())
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	312 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	313 LOG(ERROR) << "No DICOM dictionary loaded, check environment variable: " << DCM_DICT_ENVIRONMENT_VARIABLE;
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	314 throw OrthancException(ErrorCode_InternalError);
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	315 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	316
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	317 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	318 // Test the dictionary with a simple DICOM tag
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	319 DcmTag key(0x0010, 0x1030); // This is PatientWeight
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	320 if (key.getEVR() != EVR_DS)
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	321 {
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	322 LOG(ERROR) << "The DICOM dictionary has not been correctly read";
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	323 throw OrthancException(ErrorCode_InternalError);
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	324 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	325 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	326 }
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	327
d3ba98d6b6e9 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1655 diff changeset	328
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	329 void FromDcmtkBridge::RegisterDictionaryTag(const DicomTag& tag,
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	330 ValueRepresentation vr,
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	331 const std::string& name,
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	332 unsigned int minMultiplicity,
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	333 unsigned int maxMultiplicity,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	334 const std::string& privateCreator)
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	335 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	336 if (minMultiplicity < 1)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	337 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	338 throw OrthancException(ErrorCode_ParameterOutOfRange);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	339 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	340
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	341 bool arbitrary = false;
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	342 if (maxMultiplicity == 0)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	343 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	344 maxMultiplicity = DcmVariableVM;
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	345 arbitrary = true;
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	346 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	347 else if (maxMultiplicity < minMultiplicity)
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	348 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	349 throw OrthancException(ErrorCode_ParameterOutOfRange);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	350 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	351
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	352 DcmEVR evr = ToDcmtkBridge::Convert(vr);
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	353
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	354 LOG(INFO) << "Registering tag in dictionary: " << tag << " " << (DcmVR(evr).getValidVRName()) << " "
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	355 << name << " (multiplicity: " << minMultiplicity << "-"
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	356 << (arbitrary ? "n" : boost::lexical_cast<std::string>(maxMultiplicity)) << ")";
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	357
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	358 std::auto_ptr<DcmDictEntry> entry;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	359 if (privateCreator.empty())
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	360 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	361 if (tag.GetGroup() % 2 == 1)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	362 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	363 char buf[128];
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	364 sprintf(buf, "Warning: You are registering a private tag (%04x,%04x), "
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	365 "but no private creator was associated with it",
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	366 tag.GetGroup(), tag.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	367 LOG(WARNING) << buf;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	368 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	369
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	370 entry.reset(new DcmDictEntry(tag.GetGroup(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	371 tag.GetElement(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	372 evr, name.c_str(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	373 static_cast<int>(minMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	374 static_cast<int>(maxMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	375 NULL /* version */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	376 OFTrue /* doCopyString */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	377 NULL /* private creator */));
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	378 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	379 else
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	380 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	381 // "Private Data Elements have an odd Group Number that is not
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	382 // (0001,eeee), (0003,eeee), (0005,eeee), (0007,eeee), or
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	383 // (FFFF,eeee)."
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	384 if (tag.GetGroup() % 2 == 0 /* even */ \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	385 tag.GetGroup() == 0x0001 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	386 tag.GetGroup() == 0x0003 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	387 tag.GetGroup() == 0x0005 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	388 tag.GetGroup() == 0x0007 \|\|
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	389 tag.GetGroup() == 0xffff)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	390 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	391 char buf[128];
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	392 sprintf(buf, "Trying to register private tag (%04x,%04x), but it must have an odd group >= 0x0009",
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	393 tag.GetGroup(), tag.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	394 LOG(ERROR) << buf;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	395 throw OrthancException(ErrorCode_ParameterOutOfRange);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	396 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	397
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	398 entry.reset(new DcmDictEntry(tag.GetGroup(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	399 tag.GetElement(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	400 evr, name.c_str(),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	401 static_cast<int>(minMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	402 static_cast<int>(maxMultiplicity),
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	403 "private" /* version */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	404 OFTrue /* doCopyString */,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	405 privateCreator.c_str()));
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	406 }
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	407
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	408 entry->setGroupRangeRestriction(DcmDictRange_Unspecified);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	409 entry->setElementRangeRestriction(DcmDictRange_Unspecified);
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	410
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	411 {
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	412 DictionaryLocker locker;
2116 2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	413
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	414 if (locker->findEntry(name.c_str()))
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	415 {
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	416 LOG(ERROR) << "Cannot register two tags with the same symbolic name \"" << name << "\"";
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	417 throw OrthancException(ErrorCode_AlreadyExistingTag);
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	418 }
2fabd1073728 prevent registering two tags with the same symbolic name Sebastien Jodogne <s.jodogne@gmail.com> parents: 2115 diff changeset	419
1657 5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	420 locker->addEntry(entry.release());
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	421 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	422 }
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	423
5360cdba70d8 New function "OrthancPluginRegisterDictionaryTag()" to declare DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1656 diff changeset	424
1936 dba0db0a94b4 generalization Sebastien Jodogne <s.jodogne@gmail.com> parents: 1935 diff changeset	425 Encoding FromDcmtkBridge::DetectEncoding(DcmItem& dataset,
1928 84c7eaeb5244 Configuration::GetDefaultEncoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 1927 diff changeset	426 Encoding defaultEncoding)
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	427 {
1928 84c7eaeb5244 Configuration::GetDefaultEncoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 1927 diff changeset	428 Encoding encoding = defaultEncoding;
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	429
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	430 OFString tmp;
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	431 if (dataset.findAndGetOFString(DCM_SpecificCharacterSet, tmp).good())
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	432 {
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	433 std::string characterSet = Toolbox::StripSpaces(std::string(tmp.c_str()));
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	434
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	435 if (characterSet.empty())
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	436 {
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	437 // Empty specific character set tag: Use the default encoding
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	438 }
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	439 else if (GetDicomEncoding(encoding, characterSet.c_str()))
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	440 {
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	441 // The specific character set is supported by the Orthanc core
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	442 }
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	443 else
1087 e07b90fb00eb more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1086 diff changeset	444 {
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	445 LOG(WARNING) << "Value of Specific Character Set (0008,0005) is not supported: " << characterSet
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	446 << ", fallback to ASCII (remove all special characters)";
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	447 encoding = Encoding_Ascii;
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	448 }
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	449 }
1090 e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	450 else
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	451 {
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	452 // No specific character set tag: Use the default encoding
e494ceb8d763 support more encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1087 diff changeset	453 }
957 63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	454
63973b76a51f detection of encoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 956 diff changeset	455 return encoding;
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	456 }
2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	457
2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	458
2125 b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	459 void FromDcmtkBridge::ExtractDicomSummary(DicomMap& target,
b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	460 DcmItem& dataset,
b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	461 unsigned int maxStringLength,
b9bd52c72ba2 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2116 diff changeset	462 Encoding defaultEncoding)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	463 {
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	464 std::set<DicomTag> ignoreTagLength;
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	465
1928 84c7eaeb5244 Configuration::GetDefaultEncoding Sebastien Jodogne <s.jodogne@gmail.com> parents: 1927 diff changeset	466 Encoding encoding = DetectEncoding(dataset, defaultEncoding);
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	467
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	468 target.Clear();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	469 for (unsigned long i = 0; i < dataset.card(); i++)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	470 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	471 DcmElement* element = dataset.getElement(i);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	472 if (element && element->isLeaf())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	473 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	474 target.SetValue(element->getTag().getGTag(),
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	475 element->getTag().getETag(),
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	476 ConvertLeafElement(*element, DicomToJsonFlags_Default,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	477 maxStringLength, encoding, ignoreTagLength));
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	478 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	479 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	480 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	481
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	482
991 2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	483 DicomTag FromDcmtkBridge::Convert(const DcmTag& tag)
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	484 {
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	485 return DicomTag(tag.getGTag(), tag.getETag());
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	486 }
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	487
2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	488
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	489 DicomTag FromDcmtkBridge::GetTag(const DcmElement& element)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	490 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	491 return DicomTag(element.getGTag(), element.getETag());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	492 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	493
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	494
956 2fd5a163776d primitives for proper encoding handling Sebastien Jodogne <s.jodogne@gmail.com> parents: 949 diff changeset	495 DicomValue* FromDcmtkBridge::ConvertLeafElement(DcmElement& element,
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	496 DicomToJsonFlags flags,
1929 cda5b0ab4ce5 ORTHANC_MAXIMUM_TAG_LENGTH made explicit Sebastien Jodogne <s.jodogne@gmail.com> parents: 1928 diff changeset	497 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	498 Encoding encoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	499 const std::set<DicomTag>& ignoreTagLength)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	500 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	501 if (!element.isLeaf())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	502 {
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	503 // This function is only applicable to leaf elements
bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	504 throw OrthancException(ErrorCode_BadParameterType);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	505 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	506
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	507 char *c = NULL;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	508 if (element.isaString() &&
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	509 element.getString(c).good())
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	510 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	511 if (c == NULL) // This case corresponds to the empty string
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	512 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	513 return new DicomValue("", false);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	514 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	515 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	516 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	517 std::string s(c);
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	518 std::string utf8 = Toolbox::ConvertToUtf8(s, encoding);
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	519
1929 cda5b0ab4ce5 ORTHANC_MAXIMUM_TAG_LENGTH made explicit Sebastien Jodogne <s.jodogne@gmail.com> parents: 1928 diff changeset	520 if (maxStringLength != 0 &&
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	521 utf8.size() > maxStringLength &&
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	522 ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	523 {
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	524 return new DicomValue; // Too long, create a NULL value
1854 e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	525 }
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	526 else
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	527 {
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	528 return new DicomValue(utf8, false);
e2c3d752ee1a prevent too long tags to be inserted Sebastien Jodogne <s.jodogne@gmail.com> parents: 1831 diff changeset	529 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	530 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	531 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	532
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	533
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	534 if (element.getVR() == EVR_UN)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	535 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	536 // Unknown value representation: Lookup in the dictionary. This
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	537 // is notably the case for private tags registered with the
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	538 // "Dictionary" configuration option.
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	539 DictionaryLocker locker;
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	540
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	541 const DcmDictEntry* entry = locker->findEntry(element.getTag().getXTag(),
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	542 element.getTag().getPrivateCreator());
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	543 if (entry != NULL &&
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	544 entry->getVR().isaString())
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	545 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	546 Uint8* data = NULL;
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	547
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	548 // At (*), we do not try and convert to UTF-8, as nothing says
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	549 // the encoding of the private tag is the same as that of the
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	550 // remaining of the DICOM dataset. Only go for ASCII strings.
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	551
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	552 if (element.getUint8Array(data) == EC_Normal &&
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	553 Toolbox::IsAsciiString(data, element.getLength())) // (*)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	554 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	555 if (data == NULL)
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	556 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	557 return new DicomValue("", false); // Empty string
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	558 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	559 else if (maxStringLength != 0 &&
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	560 element.getLength() > maxStringLength &&
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	561 ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	562 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	563 return new DicomValue; // Too long, create a NULL value
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	564 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	565 else
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	566 {
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	567 std::string s(reinterpret_cast<const char*>(data), element.getLength());
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	568 return new DicomValue(s, false);
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	569 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	570 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	571 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	572 }
0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	573
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	574
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	575 try
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	576 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	577 // http://support.dcmtk.org/docs/dcvr_8h-source.html
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	578 switch (element.getVR())
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	579 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	580
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	581 /**
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	582 * Deal with binary data (including PixelData).
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	583 **/
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	584
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	585 case EVR_OB: // other byte
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	586 case EVR_OF: // other float
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	587 case EVR_OW: // other word
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	588 case EVR_UN: // unknown value representation
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	589 case EVR_ox: // OB or OW depending on context
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	590 case EVR_DS: // decimal string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	591 case EVR_IS: // integer string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	592 case EVR_AS: // age string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	593 case EVR_DA: // date string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	594 case EVR_DT: // date time string
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	595 case EVR_TM: // time string
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	596 case EVR_AE: // application entity title
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	597 case EVR_CS: // code string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	598 case EVR_SH: // short string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	599 case EVR_LO: // long string
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	600 case EVR_ST: // short text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	601 case EVR_LT: // long text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	602 case EVR_UT: // unlimited text
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	603 case EVR_PN: // person name
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	604 case EVR_UI: // unique identifier
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	605 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	606 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	607 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	608 if (!(flags & DicomToJsonFlags_ConvertBinaryToNull))
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	609 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	610 Uint8* data = NULL;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	611 if (element.getUint8Array(data) == EC_Normal)
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	612 {
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	613 return new DicomValue(reinterpret_cast<const char*>(data), element.getLength(), true);
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	614 }
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	615 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	616
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	617 return new DicomValue;
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	618 }
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	619
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	620 /**
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	621 * Numeric types
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	622 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	623
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	624 case EVR_SL: // signed long
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	625 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	626 return ApplyDcmtkToCTypeConverter<DcmtkToSint32Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	627 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	628
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	629 case EVR_SS: // signed short
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	630 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	631 return ApplyDcmtkToCTypeConverter<DcmtkToSint16Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	632 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	633
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	634 case EVR_UL: // unsigned long
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	635 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	636 return ApplyDcmtkToCTypeConverter<DcmtkToUint32Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	637 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	638
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	639 case EVR_US: // unsigned short
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	640 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	641 return ApplyDcmtkToCTypeConverter<DcmtkToUint16Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	642 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	643
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	644 case EVR_FL: // float single-precision
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	645 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	646 return ApplyDcmtkToCTypeConverter<DcmtkToFloat32Converter>(element);
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	647 }
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	648
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	649 case EVR_FD: // float double-precision
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	650 {
2554 ea63d9f90377 /tags now returns multiple numerical values in a \ separated string am@osimis.io parents: 2528 diff changeset	651 return ApplyDcmtkToCTypeConverter<DcmtkToFloat64Converter>(element);
1131 ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	652 }
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	653
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	654
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	655 /**
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	656 * Attribute tag.
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	657 **/
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	658
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	659 case EVR_AT:
ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	660 {
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	661 DcmTagKey tag;
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	662 if (dynamic_cast<DcmAttributeTag&>(element).getTagVal(tag, 0).good())
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	663 {
ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	664 DicomTag t(tag.getGroup(), tag.getElement());
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	665 return new DicomValue(t.Format(), false);
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	666 }
1131 ac6bd50a8c83 fix issue 16 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1093 diff changeset	667 else
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	668 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	669 return new DicomValue;
1147 ae9a83a6fa47 simplification Sebastien Jodogne <s.jodogne@gmail.com> parents: 1131 diff changeset	670 }
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	671 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	672
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	673
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	674 /**
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	675 * Sequence types, should never occur at this point because of
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	676 * "element.isLeaf()".
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	677 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	678
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	679 case EVR_SQ: // sequence of items
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	680 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	681
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	682
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	683 /**
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	684 * Internal to DCMTK.
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	685 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	686
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	687 case EVR_xs: // SS or US depending on context
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	688 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	689 case EVR_na: // na="not applicable", for data which has no VR
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	690 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	691 case EVR_item: // used internally for items
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	692 case EVR_metainfo: // used internally for meta info datasets
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	693 case EVR_dataset: // used internally for datasets
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	694 case EVR_fileFormat: // used internally for DICOM files
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	695 case EVR_dicomDir: // used internally for DICOMDIR objects
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	696 case EVR_dirRecord: // used internally for DICOMDIR records
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	697 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	698 case EVR_pixelItem: // used internally for pixel items in a compressed image
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	699 case EVR_PixelData: // used internally for uncompressed pixeld data
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	700 case EVR_OverlayData: // used internally for overlay data
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	701 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	702
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	703
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	704 /**
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	705 * Default case.
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	706 **/
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	707
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	708 default:
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	709 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	710 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	711 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	712 catch (boost::bad_lexical_cast&)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	713 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	714 return new DicomValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	715 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	716 catch (std::bad_cast&)
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	717 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	718 return new DicomValue;
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	719 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	720 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	721
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	722
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	723 static Json::Value& PrepareNode(Json::Value& parent,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	724 DcmElement& element,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	725 DicomToJsonFormat format)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	726 {
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	727 assert(parent.type() == Json::objectValue);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	728
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	729 DicomTag tag(FromDcmtkBridge::GetTag(element));
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	730 const std::string formattedTag = tag.Format();
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	731
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	732 if (format == DicomToJsonFormat_Short)
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	733 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	734 parent[formattedTag] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	735 return parent[formattedTag];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	736 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	737
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	738 // This code gives access to the name of the private tags
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	739 std::string tagName = FromDcmtkBridge::GetTagName(element);
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	740
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	741 switch (format)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	742 {
1860 c7d70f659190 DicomToJsonFormat_Simple -> DicomToJsonFormat_Human Sebastien Jodogne <s.jodogne@gmail.com> parents: 1854 diff changeset	743 case DicomToJsonFormat_Human:
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	744 parent[tagName] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	745 return parent[tagName];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	746
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	747 case DicomToJsonFormat_Full:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	748 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	749 parent[formattedTag] = Json::objectValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	750 Json::Value& node = parent[formattedTag];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	751
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	752 if (element.isLeaf())
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	753 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	754 node["Name"] = tagName;
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	755
2076 ec2ad6ac741e fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2074 diff changeset	756 if (element.getTag().getPrivateCreator() != NULL)
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	757 {
2076 ec2ad6ac741e fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 2074 diff changeset	758 node["PrivateCreator"] = element.getTag().getPrivateCreator();
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	759 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	760
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	761 return node;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	762 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	763 else
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	764 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	765 node["Name"] = tagName;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	766 node["Type"] = "Sequence";
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	767 node["Value"] = Json::nullValue;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	768 return node["Value"];
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	769 }
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	770 }
326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	771
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	772 default:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	773 throw OrthancException(ErrorCode_ParameterOutOfRange);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	774 }
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	775 }
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	776
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	777
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	778 static void LeafValueToJson(Json::Value& target,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	779 const DicomValue& value,
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	780 DicomToJsonFormat format,
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	781 DicomToJsonFlags flags,
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	782 unsigned int maxStringLength)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	783 {
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	784 Json::Value* targetValue = NULL;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	785 Json::Value* targetType = NULL;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	786
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	787 switch (format)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	788 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	789 case DicomToJsonFormat_Short:
1860 c7d70f659190 DicomToJsonFormat_Simple -> DicomToJsonFormat_Human Sebastien Jodogne <s.jodogne@gmail.com> parents: 1854 diff changeset	790 case DicomToJsonFormat_Human:
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	791 {
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	792 assert(target.type() == Json::nullValue);
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	793 targetValue = &target;
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	794 break;
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	795 }
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	796
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	797 case DicomToJsonFormat_Full:
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	798 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	799 assert(target.type() == Json::objectValue);
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	800 target["Value"] = Json::nullValue;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	801 target["Type"] = Json::nullValue;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	802 targetType = &target["Type"];
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	803 targetValue = &target["Value"];
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	804 break;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	805 }
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	806
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	807 default:
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	808 throw OrthancException(ErrorCode_ParameterOutOfRange);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	809 }
1738 15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	810
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	811 assert(targetValue != NULL);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	812 assert(targetValue->type() == Json::nullValue);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	813 assert(targetType == NULL \|\| targetType->type() == Json::nullValue);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	814
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	815 if (value.IsNull())
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	816 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	817 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	818 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	819 *targetType = "Null";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	820 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	821 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	822 else if (value.IsBinary())
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	823 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	824 if (flags & DicomToJsonFlags_ConvertBinaryToAscii)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	825 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	826 *targetValue = Toolbox::ConvertToAscii(value.GetContent());
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	827 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	828 else
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	829 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	830 std::string s;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	831 value.FormatDataUriScheme(s);
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	832 *targetValue = s;
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	833 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	834
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	835 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	836 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	837 *targetType = "Binary";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	838 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	839 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	840 else if (maxStringLength == 0 \|\|
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	841 value.GetContent().size() <= maxStringLength)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	842 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	843 *targetValue = value.GetContent();
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	844
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	845 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	846 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	847 *targetType = "String";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	848 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	849 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	850 else
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	851 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	852 if (targetType != NULL)
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	853 {
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	854 *targetType = "TooLong";
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	855 }
15a788a63846 DicomToJsonFlags_IncludeBinary Sebastien Jodogne <s.jodogne@gmail.com> parents: 1737 diff changeset	856 }
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	857 }
35 f6d12037f886 full json vs. simplified json Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	858
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	859
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	860 void FromDcmtkBridge::ElementToJson(Json::Value& parent,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	861 DcmElement& element,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	862 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	863 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	864 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	865 Encoding encoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	866 const std::set<DicomTag>& ignoreTagLength)
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	867 {
1691 e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	868 if (parent.type() == Json::nullValue)
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	869 {
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	870 parent = Json::objectValue;
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	871 }
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	872
e447f3cb8b30 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 1690 diff changeset	873 assert(parent.type() == Json::objectValue);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	874 Json::Value& target = PrepareNode(parent, element, format);
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	875
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	876 if (element.isLeaf())
4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	877 {
2129 0c09d1af22f3 "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 2126 diff changeset	878 // The "0" below lets "LeafValueToJson()" take care of "TooLong" values
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	879 std::auto_ptr<DicomValue> v(FromDcmtkBridge::ConvertLeafElement
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	880 (element, flags, 0, encoding, ignoreTagLength));
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	881
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	882 if (ignoreTagLength.find(GetTag(element)) == ignoreTagLength.end())
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	883 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	884 LeafValueToJson(target, *v, format, flags, maxStringLength);
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	885 }
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	886 else
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	887 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	888 LeafValueToJson(target, *v, format, flags, 0);
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	889 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	890 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	891 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	892 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	893 assert(target.type() == Json::nullValue);
27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	894 target = Json::arrayValue;
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	895
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	896 // "All subclasses of DcmElement except for DcmSequenceOfItems
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	897 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	898 // etc. are not." The following dynamic_cast is thus OK.
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	899 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	900
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	901 for (unsigned long i = 0; i < sequence.card(); i++)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	902 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	903 DcmItem* child = sequence.getItem(i);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	904 Json::Value& v = target.append(Json::objectValue);
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	905 DatasetToJson(v, *child, format, flags, maxStringLength, encoding, ignoreTagLength);
1687 4d80fc990dae refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1686 diff changeset	906 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	907 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	908 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	909
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	910
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	911 void FromDcmtkBridge::DatasetToJson(Json::Value& parent,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	912 DcmItem& item,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	913 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	914 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	915 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	916 Encoding encoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	917 const std::set<DicomTag>& ignoreTagLength)
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	918 {
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	919 assert(parent.type() == Json::objectValue);
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	920
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	921 for (unsigned long i = 0; i < item.card(); i++)
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	922 {
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	923 DcmElement* element = item.getElement(i);
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	924 if (element == NULL)
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	925 {
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	926 throw OrthancException(ErrorCode_InternalError);
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	927 }
a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	928
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	929 DicomTag tag(FromDcmtkBridge::Convert(element->getTag()));
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	930
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	931 /element->getTag().isPrivate()/
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	932 if (tag.IsPrivate() &&
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	933 !(flags & DicomToJsonFlags_IncludePrivateTags))
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	934 {
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	935 continue;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	936 }
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	937
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	938 if (!(flags & DicomToJsonFlags_IncludeUnknownTags))
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	939 {
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	940 DictionaryLocker locker;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	941 if (locker->findEntry(element->getTag(), NULL) == NULL)
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	942 {
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	943 continue;
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	944 }
1735 a001f6226c7c primitives for flags in dicom-to-json conversions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1695 diff changeset	945 }
1736 b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1735 diff changeset	946
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	947 DcmEVR evr = element->getTag().getEVR();
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	948 if (evr == EVR_OB \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	949 evr == EVR_OF \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	950 evr == EVR_OW \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	951 evr == EVR_UN \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	952 evr == EVR_ox)
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	953 {
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	954 // This is a binary tag
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	955 if ((tag == DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludePixelData)) \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	956 (tag != DICOM_TAG_PIXEL_DATA && !(flags & DicomToJsonFlags_IncludeBinary)))
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	957 {
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	958 continue;
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	959 }
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	960 }
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	961
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	962 FromDcmtkBridge::ElementToJson(parent, *element, format, flags,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	963 maxStringLength, encoding, ignoreTagLength);
1686 14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	964 }
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	965 }
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	966
14a32b2fa63e refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1657 diff changeset	967
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	968 void FromDcmtkBridge::ExtractDicomAsJson(Json::Value& target,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	969 DcmDataset& dataset,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	970 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	971 DicomToJsonFlags flags,
2131 bb199bccdc45 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 2129 diff changeset	972 unsigned int maxStringLength,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	973 Encoding defaultEncoding,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	974 const std::set<DicomTag>& ignoreTagLength)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	975 {
2131 bb199bccdc45 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 2129 diff changeset	976 Encoding encoding = DetectEncoding(dataset, defaultEncoding);
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	977
1688 27d70e9ee2e4 DicomToJsonFormat enumeration Sebastien Jodogne <s.jodogne@gmail.com> parents: 1687 diff changeset	978 target = Json::objectValue;
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	979 DatasetToJson(target, dataset, format, flags, maxStringLength, encoding, ignoreTagLength);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	980 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	981
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	982
2126 03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	983 void FromDcmtkBridge::ExtractHeaderAsJson(Json::Value& target,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	984 DcmMetaInfo& dataset,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	985 DicomToJsonFormat format,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	986 DicomToJsonFlags flags,
03b065778fc3 cleaning up Sebastien Jodogne <s.jodogne@gmail.com> parents: 2125 diff changeset	987 unsigned int maxStringLength)
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	988 {
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	989 std::set<DicomTag> ignoreTagLength;
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	990 target = Json::objectValue;
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	991 DatasetToJson(target, dataset, format, flags, maxStringLength, Encoding_Ascii, ignoreTagLength);
1831 3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	992 }
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	993
3ae2ff249675 "/instances/.../header" to get the meta information (header) of the DICOM instance Sebastien Jodogne <s.jodogne@gmail.com> parents: 1818 diff changeset	994
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	995
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	996 static std::string GetTagNameInternal(DcmTag& tag)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	997 {
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	998 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	999 // Some patches for important tags because of different DICOM
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1000 // dictionaries between DCMTK versions
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1001 DicomTag tmp(tag.getGroup(), tag.getElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1002 std::string n = tmp.GetMainTagsName();
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1003 if (n.size() != 0)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1004 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1005 return n;
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1006 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1007 // End of patches
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1008 }
106 332fec038d52 patch for dcmtk dictionaries jodogne parents: 80 diff changeset	1009
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1010 #if 0
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1011 // This version explicitly calls the dictionary
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1012 const DcmDataDictionary& dict = dcmDataDict.rdlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1013 const DcmDictEntry* entry = dict.findEntry(tag, NULL);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1014
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1015 std::string s(DcmTag_ERROR_TagName);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1016 if (entry != NULL)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1017 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1018 s = std::string(entry->getTagName());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1019 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1020
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1021 dcmDataDict.unlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1022 return s;
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1023 #else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1024 const char* name = tag.getTagName();
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1025 if (name == NULL)
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1026 {
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1027 return DcmTag_ERROR_TagName;
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1028 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1029 else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1030 {
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1031 return std::string(name);
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1032 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1033 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1034 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1035
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1036
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1037 std::string FromDcmtkBridge::GetTagName(const DicomTag& t,
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1038 const std::string& privateCreator)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1039 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1040 DcmTag tag(t.GetGroup(), t.GetElement());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1041
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1042 if (!privateCreator.empty())
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1043 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1044 tag.setPrivateCreator(privateCreator.c_str());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1045 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1046
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1047 return GetTagNameInternal(tag);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1048 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1049
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1050
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1051 std::string FromDcmtkBridge::GetTagName(const DcmElement& element)
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1052 {
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1053 // Copy the tag to ensure const-correctness of DcmElement. Note
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1054 // that the private creator information is also copied.
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1055 DcmTag tag(element.getTag());
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1056
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1057 return GetTagNameInternal(tag);
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1058 }
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1059
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1060
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1061
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1062 DicomTag FromDcmtkBridge::ParseTag(const char* name)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1063 {
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1064 if (strlen(name) == 9 &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1065 isxdigit(name[0]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1066 isxdigit(name[1]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1067 isxdigit(name[2]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1068 isxdigit(name[3]) &&
991 2f76b92addd4 keep private tags during anonymization Sebastien Jodogne <s.jodogne@gmail.com> parents: 957 diff changeset	1069 (name[4] == '-' \|\| name[4] == ',') &&
304 4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1070 isxdigit(name[5]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1071 isxdigit(name[6]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1072 isxdigit(name[7]) &&
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1073 isxdigit(name[8]))
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1074 {
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1075 uint16_t group = GetTagValue(name);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1076 uint16_t element = GetTagValue(name + 5);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1077 return DicomTag(group, element);
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1078 }
4eea080e6e7a refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 303 diff changeset	1079
1861 a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1080 if (strlen(name) == 8 &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1081 isxdigit(name[0]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1082 isxdigit(name[1]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1083 isxdigit(name[2]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1084 isxdigit(name[3]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1085 isxdigit(name[4]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1086 isxdigit(name[5]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1087 isxdigit(name[6]) &&
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1088 isxdigit(name[7]))
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1089 {
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1090 uint16_t group = GetTagValue(name);
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1091 uint16_t element = GetTagValue(name + 4);
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1092 return DicomTag(group, element);
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1093 }
a7bea843a7bc "OrthancPluginLookupDictionary()" to get information about some DICOM tag Sebastien Jodogne <s.jodogne@gmail.com> parents: 1860 diff changeset	1094
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1095 #if 0
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1096 const DcmDataDictionary& dict = dcmDataDict.rdlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1097 const DcmDictEntry* entry = dict.findEntry(name);
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1098
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1099 if (entry == NULL)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1100 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1101 dcmDataDict.unlock();
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	1102 throw OrthancException(ErrorCode_UnknownDicomTag);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1103 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1104 else
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1105 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1106 DcmTagKey key = entry->getKey();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1107 DicomTag tag(key.getGroup(), key.getElement());
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1108 dcmDataDict.unlock();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1109 return tag;
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1110 }
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1111 #else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1112 DcmTag tag;
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1113 if (DcmTag::findTagFromName(name, tag).good())
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1114 {
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1115 return DicomTag(tag.getGTag(), tag.getETag());
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1116 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1117 else
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1118 {
2470 45de30d4f362 log Sebastien Jodogne <s.jodogne@gmail.com> parents: 2447 diff changeset	1119 LOG(INFO) << "Unknown DICOM tag: \"" << name << "\"";
1582 bd1889029cbb encoding of exceptions Sebastien Jodogne <s.jodogne@gmail.com> parents: 1557 diff changeset	1120 throw OrthancException(ErrorCode_UnknownDicomTag);
305 86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1121 }
86bb79522f19 name of the private tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 304 diff changeset	1122 #endif
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1123 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1124
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1125
1655 e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1126 bool FromDcmtkBridge::IsUnknownTag(const DicomTag& tag)
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1127 {
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1128 DcmTag tmp(tag.GetGroup(), tag.GetElement());
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1129 return tmp.isUnknownVR();
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1130 }
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1131
e40fd0d925c5 /tools/create-dicom can create tags with unknown VR Sebastien Jodogne <s.jodogne@gmail.com> parents: 1612 diff changeset	1132
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1133 void FromDcmtkBridge::ToJson(Json::Value& result,
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1134 const DicomMap& values,
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1135 bool simplify)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1136 {
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1137 if (result.type() != Json::objectValue)
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1138 {
62 a70bb32802ae renaming Server Sebastien Jodogne <s.jodogne@gmail.com> parents: 57 diff changeset	1139 throw OrthancException(ErrorCode_BadParameterType);
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1140 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1141
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1142 result.clear();
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1143
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1144 for (DicomMap::Map::const_iterator
656 08eca5d86aad fixes to cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 465 diff changeset	1145 it = values.map_.begin(); it != values.map_.end(); ++it)
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1146 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1147 // TODO Inject PrivateCreator if some is available in the DicomMap?
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1148 const std::string tagName = GetTagName(it->first, "");
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1149
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1150 if (simplify)
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1151 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1152 if (it->second->IsNull())
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1153 {
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1154 result[tagName] = Json::nullValue;
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1155 }
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1156 else
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1157 {
ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1158 // TODO IsBinary
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1159 result[tagName] = it->second->GetContent();
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1160 }
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1161 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1162 else
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1163 {
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1164 Json::Value value = Json::objectValue;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1165
2115 a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option Sebastien Jodogne <s.jodogne@gmail.com> parents: 2076 diff changeset	1166 value["Name"] = tagName;
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1167
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1168 if (it->second->IsNull())
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1169 {
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1170 value["Type"] = "Null";
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1171 value["Value"] = Json::nullValue;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1172 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1173 else
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1174 {
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1175 // TODO IsBinary
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1176 value["Type"] = "String";
1737 ec66a16aa398 removal of DicomStringValue and DicomNullValue Sebastien Jodogne <s.jodogne@gmail.com> parents: 1736 diff changeset	1177 value["Value"] = it->second->GetContent();
1368 b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1178 }
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1179
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1180 result[it->first.Format()] = value;
b22ba8c5edbe query retrieve Sebastien Jodogne <s.jodogne@gmail.com> parents: 1360 diff changeset	1181 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1182 }
3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1183 }
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1184
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1185
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1186 std::string FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType level)
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1187 {
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1188 char uid[100];
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1189
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1190 switch (level)
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1191 {
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1192 case ResourceType_Patient:
311 26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1193 // The "PatientID" field is of type LO (Long String), 64
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1194 // Bytes Maximum. An UUID is of length 36, thus it can be used
26efccdff583 anonymisation Sebastien Jodogne <s.jodogne@gmail.com> parents: 308 diff changeset	1195 // as a random PatientID.
2512 4dcafa8d6633 SystemToolbox::GenerateUuid moved to Toolbox::GenerateUuid Sebastien Jodogne <s.jodogne@gmail.com> parents: 2499 diff changeset	1196 return Toolbox::GenerateUuid();
306 326d5a4a5af3 modification of instances Sebastien Jodogne <s.jodogne@gmail.com> parents: 305 diff changeset	1197
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1198 case ResourceType_Instance:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1199 return dcmGenerateUniqueIdentifier(uid, SITE_INSTANCE_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1200
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1201 case ResourceType_Series:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1202 return dcmGenerateUniqueIdentifier(uid, SITE_SERIES_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1203
788 7ebe4bf87196 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 784 diff changeset	1204 case ResourceType_Study:
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1205 return dcmGenerateUniqueIdentifier(uid, SITE_STUDY_UID_ROOT);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1206
302 238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1207 default:
238134081136 modification of dicom files Sebastien Jodogne <s.jodogne@gmail.com> parents: 291 diff changeset	1208 throw OrthancException(ErrorCode_ParameterOutOfRange);
176 81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1209 }
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1210 }
81f11fb357f2 uid generation Sebastien Jodogne <s.jodogne@gmail.com> parents: 136 diff changeset	1211
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1212 bool FromDcmtkBridge::SaveToMemoryBuffer(std::string& buffer,
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1213 DcmDataset& dataSet)
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1214 {
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1215 // Determine the transfer syntax which shall be used to write the
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1216 // information to the file. We always switch to the Little Endian
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1217 // syntax, with explicit length.
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1218
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1219 // http://support.dcmtk.org/docs/dcxfer_8h-source.html
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1220
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1221
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1222 /**
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1223 * Note that up to Orthanc 0.7.1 (inclusive), the
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1224 * "EXS_LittleEndianExplicit" was always used to save the DICOM
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1225 * dataset into memory. We now keep the original transfer syntax
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1226 * (if available).
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1227 **/
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1228 E_TransferSyntax xfer = dataSet.getOriginalXfer();
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1229 if (xfer == EXS_Unknown)
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1230 {
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1231 // No information about the original transfer syntax: This is
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1232 // most probably a DICOM dataset that was read from memory.
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1233 xfer = EXS_LittleEndianExplicit;
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1234 }
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1235
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1236 E_EncodingType encodingType = /opt_sequenceType/ EET_ExplicitLength;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1237
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1238 // Create the meta-header information
1004 a226e0959d8b DicomInstanceToStore Sebastien Jodogne <s.jodogne@gmail.com> parents: 991 diff changeset	1239 DcmFileFormat ff(&dataSet);
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1240 ff.validateMetaInfo(xfer);
1316 1c8dfedefefe Fix anonymization generating non-portable DICOM files Sebastien Jodogne <s.jodogne@gmail.com> parents: 1307 diff changeset	1241 ff.removeInvalidGroups();
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1242
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1243 // Create a memory buffer with the proper size
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1244 {
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1245 const uint32_t estimatedSize = ff.calcElementLength(xfer, encodingType); // (*)
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1246 buffer.resize(estimatedSize);
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1247 }
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1248
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1249 DcmOutputBufferStream ob(&buffer[0], buffer.size());
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1250
661 d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1251 // Fill the memory buffer with the meta-header and the dataset
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1252 ff.transferInit();
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1253 OFCondition c = ff.write(ob, xfer, encodingType, NULL,
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1254 /opt_groupLength/ EGL_recalcGL,
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1255 /opt_paddingType/ EPD_withoutPadding);
d233b5090105 accept more transfer syntaxes for C-Store SCP, write meta-header when receiving files Sebastien Jodogne <s.jodogne@gmail.com> parents: 656 diff changeset	1256 ff.transferEnd();
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1257
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1258 if (c.good())
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1259 {
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1260 // The DICOM file is successfully written, truncate the target
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1261 // buffer if its size was overestimated by (*)
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1262 ob.flush();
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1263
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1264 size_t effectiveSize = static_cast<size_t>(ob.tell());
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1265 if (effectiveSize < buffer.size())
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1266 {
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1267 buffer.resize(effectiveSize);
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1268 }
9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1269
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1270 return true;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1271 }
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1272 else
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1273 {
1876 9b458e4484a1 truncation of serialized DICOM buffers if calcElementLength was overestimated Sebastien Jodogne <s.jodogne@gmail.com> parents: 1861 diff changeset	1274 // Error
291 4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1275 buffer.clear();
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1276 return false;
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1277 }
4d7469f72a0b embedding of dicom dictionaries Sebastien Jodogne <s.jodogne@gmail.com> parents: 285 diff changeset	1278 }
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1279
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1280
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1281 ValueRepresentation FromDcmtkBridge::LookupValueRepresentation(const DicomTag& tag)
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1282 {
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1283 DcmTag t(tag.GetGroup(), tag.GetElement());
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1284 return Convert(t.getEVR());
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1285 }
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1286
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1287 ValueRepresentation FromDcmtkBridge::Convert(const DcmEVR vr)
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1288 {
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1289 switch (vr)
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1290 {
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1291 case EVR_AE:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1292 return ValueRepresentation_ApplicationEntity;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1293
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1294 case EVR_AS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1295 return ValueRepresentation_AgeString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1296
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1297 case EVR_AT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1298 return ValueRepresentation_AttributeTag;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1299
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1300 case EVR_CS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1301 return ValueRepresentation_CodeString;
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1302
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1303 case EVR_DA:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1304 return ValueRepresentation_Date;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1305
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1306 case EVR_DS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1307 return ValueRepresentation_DecimalString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1308
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1309 case EVR_DT:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1310 return ValueRepresentation_DateTime;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1311
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1312 case EVR_FL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1313 return ValueRepresentation_FloatingPointSingle;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1314
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1315 case EVR_FD:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1316 return ValueRepresentation_FloatingPointDouble;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1317
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1318 case EVR_IS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1319 return ValueRepresentation_IntegerString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1320
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1321 case EVR_LO:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1322 return ValueRepresentation_LongString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1323
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1324 case EVR_LT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1325 return ValueRepresentation_LongText;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1326
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1327 case EVR_OB:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1328 return ValueRepresentation_OtherByte;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1329
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1330 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1331 /*case EVR_OD:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1332 return ValueRepresentation_OtherDouble;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1333
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1334 case EVR_OF:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1335 return ValueRepresentation_OtherFloat;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1336
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1337 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1338 /*case EVR_OL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1339 return ValueRepresentation_OtherLong;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1340
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1341 case EVR_OW:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1342 return ValueRepresentation_OtherWord;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1343
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1344 case EVR_PN:
2007 655489d9165d DicomMap::ParseDicomMetaInformation() Sebastien Jodogne <s.jodogne@gmail.com> parents: 2006 diff changeset	1345 return ValueRepresentation_PersonName;
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1346
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1347 case EVR_SH:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1348 return ValueRepresentation_ShortString;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1349
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1350 case EVR_SL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1351 return ValueRepresentation_SignedLong;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1352
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1353 case EVR_SQ:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1354 return ValueRepresentation_Sequence;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1355
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1356 case EVR_SS:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1357 return ValueRepresentation_SignedShort;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1358
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1359 case EVR_ST:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1360 return ValueRepresentation_ShortText;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1361
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1362 case EVR_TM:
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1363 return ValueRepresentation_Time;
8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1364
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1365 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1366 /*case EVR_UC:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1367 return ValueRepresentation_UnlimitedCharacters;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1368
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1369 case EVR_UI:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1370 return ValueRepresentation_UniqueIdentifier;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1371
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1372 case EVR_UL:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1373 return ValueRepresentation_UnsignedLong;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1374
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1375 case EVR_UN:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1376 return ValueRepresentation_Unknown;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1377
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1378 // Not supported as of DCMTK 3.6.0
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1379 /*case EVR_UR:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1380 return ValueRepresentation_UniversalResource;*/
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1381
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1382 case EVR_US:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1383 return ValueRepresentation_UnsignedShort;
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1384
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1385 case EVR_UT:
6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1386 return ValueRepresentation_UnlimitedText;
1792 b769623c806c safety check Sebastien Jodogne <s.jodogne@gmail.com> parents: 1765 diff changeset	1387
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1388 default:
2006 6301bbcbcaed more generic support of value representations Sebastien Jodogne <s.jodogne@gmail.com> parents: 1998 diff changeset	1389 return ValueRepresentation_NotSupported;
1417 8e23f16a198d fix issues 35 and 37 Sebastien Jodogne <s.jodogne@gmail.com> parents: 1368 diff changeset	1390 }
1360 0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1391 }
0649c5aef34a DicomFindQuery Sebastien Jodogne <s.jodogne@gmail.com> parents: 1316 diff changeset	1392
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1393
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1394 static bool IsBinaryTag(const DcmTag& key)
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1395 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1396 return (key.isUnknownVR() \|\|
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1397 key.getEVR() == EVR_OB \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1398 key.getEVR() == EVR_OF \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1399 key.getEVR() == EVR_OW \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1400 key.getEVR() == EVR_UN \|\|
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1401 key.getEVR() == EVR_ox);
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1402 }
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1403
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1404
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1405 DcmElement* FromDcmtkBridge::CreateElementForTag(const DicomTag& tag)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1406 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1407 DcmTag key(tag.GetGroup(), tag.GetElement());
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1408
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1409 if (tag.IsPrivate() \|\|
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1410 IsBinaryTag(key))
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1411 {
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1412 return new DcmOtherByteOtherWord(key);
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1413 }
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1414
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1415 switch (key.getEVR())
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1416 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1417 // http://support.dcmtk.org/docs/dcvr_8h-source.html
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1418
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1419 /**
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1420 * Binary types, handled above
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1421 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1422
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1423 case EVR_OB: // other byte
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1424 case EVR_OF: // other float
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1425 case EVR_OW: // other word
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1426 case EVR_UN: // unknown value representation
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1427 case EVR_ox: // OB or OW depending on context
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1428 throw OrthancException(ErrorCode_InternalError);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1429
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1430
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1431 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1432 * String types.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1433 * http://support.dcmtk.org/docs/classDcmByteString.html
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1434 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1435
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1436 case EVR_AS: // age string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1437 return new DcmAgeString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1438
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1439 case EVR_AE: // application entity title
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1440 return new DcmApplicationEntity(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1441
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1442 case EVR_CS: // code string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1443 return new DcmCodeString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1444
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1445 case EVR_DA: // date string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1446 return new DcmDate(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1447
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1448 case EVR_DT: // date time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1449 return new DcmDateTime(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1450
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1451 case EVR_DS: // decimal string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1452 return new DcmDecimalString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1453
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1454 case EVR_IS: // integer string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1455 return new DcmIntegerString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1456
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1457 case EVR_TM: // time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1458 return new DcmTime(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1459
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1460 case EVR_UI: // unique identifier
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1461 return new DcmUniqueIdentifier(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1462
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1463 case EVR_ST: // short text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1464 return new DcmShortText(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1465
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1466 case EVR_LO: // long string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1467 return new DcmLongString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1468
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1469 case EVR_LT: // long text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1470 return new DcmLongText(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1471
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1472 case EVR_UT: // unlimited text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1473 return new DcmUnlimitedText(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1474
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1475 case EVR_SH: // short string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1476 return new DcmShortString(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1477
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1478 case EVR_PN: // person name
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1479 return new DcmPersonName(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1480
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1481
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1482 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1483 * Numerical types
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1484 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1485
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1486 case EVR_SL: // signed long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1487 return new DcmSignedLong(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1488
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1489 case EVR_SS: // signed short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1490 return new DcmSignedShort(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1491
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1492 case EVR_UL: // unsigned long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1493 return new DcmUnsignedLong(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1494
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1495 case EVR_US: // unsigned short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1496 return new DcmUnsignedShort(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1497
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1498 case EVR_FL: // float single-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1499 return new DcmFloatingPointSingle(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1500
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1501 case EVR_FD: // float double-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1502 return new DcmFloatingPointDouble(key);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1503
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1504
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1505 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1506 * Sequence types, should never occur at this point.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1507 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1508
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1509 case EVR_SQ: // sequence of items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1510 throw OrthancException(ErrorCode_ParameterOutOfRange);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1511
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1512
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1513 /**
1739 df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1514 * TODO
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1515 **/
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1516
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1517 case EVR_AT: // attribute tag
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1518 throw OrthancException(ErrorCode_NotImplemented);
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1519
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1520
df331354cea2 include binary in ToJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1738 diff changeset	1521 /**
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1522 * Internal to DCMTK.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1523 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1524
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1525 case EVR_xs: // SS or US depending on context
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1526 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1527 case EVR_na: // na="not applicable", for data which has no VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1528 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1529 case EVR_item: // used internally for items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1530 case EVR_metainfo: // used internally for meta info datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1531 case EVR_dataset: // used internally for datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1532 case EVR_fileFormat: // used internally for DICOM files
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1533 case EVR_dicomDir: // used internally for DICOMDIR objects
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1534 case EVR_dirRecord: // used internally for DICOMDIR records
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1535 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1536 case EVR_pixelItem: // used internally for pixel items in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1537 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1538 case EVR_PixelData: // used internally for uncompressed pixeld data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1539 case EVR_OverlayData: // used internally for overlay data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1540 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1541 default:
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1542 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1543 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1544
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1545 throw OrthancException(ErrorCode_InternalError);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1546 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1547
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1548
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1549
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1550 void FromDcmtkBridge::FillElementWithString(DcmElement& element,
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1551 const DicomTag& tag,
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1552 const std::string& utf8Value,
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1553 bool decodeDataUriScheme,
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1554 Encoding dicomEncoding)
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1555 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1556 std::string binary;
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1557 const std::string* decoded = &utf8Value;
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1558
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1559 if (decodeDataUriScheme &&
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1560 boost::starts_with(utf8Value, "data:application/octet-stream;base64,"))
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1561 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1562 std::string mime;
1981 4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1563 if (!Toolbox::DecodeDataUriScheme(mime, binary, utf8Value))
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1564 {
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1565 throw OrthancException(ErrorCode_BadFileFormat);
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1566 }
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme Sebastien Jodogne <s.jodogne@gmail.com> parents: 1976 diff changeset	1567
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1568 decoded = &binary;
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1569 }
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1570 else if (dicomEncoding != Encoding_Utf8)
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1571 {
18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1572 binary = Toolbox::ConvertFromUtf8(utf8Value, dicomEncoding);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1573 decoded = &binary;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1574 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1575
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1576 DcmTag key(tag.GetGroup(), tag.GetElement());
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1577
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1578 if (tag.IsPrivate() \|\|
1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1579 IsBinaryTag(key))
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1580 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1581 if (element.putUint8Array((const Uint8*) decoded->c_str(), decoded->size()).good())
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1582 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1583 return;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1584 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1585 else
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1586 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1587 throw OrthancException(ErrorCode_InternalError);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1588 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1589 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1590
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1591 bool ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1592
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1593 try
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1594 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1595 switch (key.getEVR())
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1596 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1597 // http://support.dcmtk.org/docs/dcvr_8h-source.html
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1598
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1599 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1600 * TODO.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1601 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1602
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1603 case EVR_OB: // other byte
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1604 case EVR_OF: // other float
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1605 case EVR_OW: // other word
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1606 case EVR_AT: // attribute tag
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1607 throw OrthancException(ErrorCode_NotImplemented);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1608
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1609 case EVR_UN: // unknown value representation
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1610 throw OrthancException(ErrorCode_ParameterOutOfRange);
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1611
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1612
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1613 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1614 * String types.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1615 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1616
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1617 case EVR_DS: // decimal string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1618 case EVR_IS: // integer string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1619 case EVR_AS: // age string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1620 case EVR_DA: // date string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1621 case EVR_DT: // date time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1622 case EVR_TM: // time string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1623 case EVR_AE: // application entity title
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1624 case EVR_CS: // code string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1625 case EVR_SH: // short string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1626 case EVR_LO: // long string
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1627 case EVR_ST: // short text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1628 case EVR_LT: // long text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1629 case EVR_UT: // unlimited text
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1630 case EVR_PN: // person name
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1631 case EVR_UI: // unique identifier
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1632 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1633 ok = element.putString(decoded->c_str()).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1634 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1635 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1636
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1637
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1638 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1639 * Numerical types
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1640 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1641
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1642 case EVR_SL: // signed long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1643 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1644 ok = element.putSint32(boost::lexical_cast<Sint32>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1645 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1646 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1647
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1648 case EVR_SS: // signed short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1649 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1650 ok = element.putSint16(boost::lexical_cast<Sint16>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1651 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1652 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1653
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1654 case EVR_UL: // unsigned long
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1655 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1656 ok = element.putUint32(boost::lexical_cast<Uint32>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1657 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1658 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1659
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1660 case EVR_US: // unsigned short
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1661 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1662 ok = element.putUint16(boost::lexical_cast<Uint16>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1663 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1664 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1665
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1666 case EVR_FL: // float single-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1667 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1668 ok = element.putFloat32(boost::lexical_cast<float>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1669 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1670 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1671
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1672 case EVR_FD: // float double-precision
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1673 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1674 ok = element.putFloat64(boost::lexical_cast<double>(*decoded)).good();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1675 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1676 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1677
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1678
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1679 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1680 * Sequence types, should never occur at this point.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1681 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1682
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1683 case EVR_SQ: // sequence of items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1684 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1685 ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1686 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1687 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1688
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1689
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1690 /**
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1691 * Internal to DCMTK.
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1692 **/
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1693
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1694 case EVR_ox: // OB or OW depending on context
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1695 case EVR_xs: // SS or US depending on context
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1696 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1697 case EVR_na: // na="not applicable", for data which has no VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1698 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1699 case EVR_item: // used internally for items
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1700 case EVR_metainfo: // used internally for meta info datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1701 case EVR_dataset: // used internally for datasets
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1702 case EVR_fileFormat: // used internally for DICOM files
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1703 case EVR_dicomDir: // used internally for DICOMDIR objects
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1704 case EVR_dirRecord: // used internally for DICOMDIR records
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1705 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1706 case EVR_pixelItem: // used internally for pixel items in a compressed image
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1707 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1708 case EVR_PixelData: // used internally for uncompressed pixeld data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1709 case EVR_OverlayData: // used internally for overlay data
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1710 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1711 default:
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1712 break;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1713 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1714 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1715 catch (boost::bad_lexical_cast&)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1716 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1717 ok = false;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1718 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1719
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1720 if (!ok)
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1721 {
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1722 LOG(ERROR) << "While creating a DICOM instance, tag (" << tag.Format()
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1723 << ") has out-of-range value: \"" << *decoded << "\"";
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1724 throw OrthancException(ErrorCode_BadFileFormat);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1725 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1726 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1727
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1728
1693 558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1729 DcmElement* FromDcmtkBridge::FromJson(const DicomTag& tag,
558b25228a23 creation of tag hierarchy from json Sebastien Jodogne <s.jodogne@gmail.com> parents: 1691 diff changeset	1730 const Json::Value& value,
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1731 bool decodeDataUriScheme,
1695 18c02c6987d5 fix for encodings Sebastien Jodogne <s.jodogne@gmail.com> parents: 1694 diff changeset	1732 Encoding dicomEncoding)
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1733 {
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1734 std::auto_ptr<DcmElement> element;
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1735
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1736 switch (value.type())
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1737 {
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1738 case Json::stringValue:
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1739 element.reset(CreateElementForTag(tag));
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1740 FillElementWithString(*element, tag, value.asString(), decodeDataUriScheme, dicomEncoding);
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1741 break;
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1742
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1743 case Json::nullValue:
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1744 element.reset(CreateElementForTag(tag));
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1745 FillElementWithString(*element, tag, "", decodeDataUriScheme, dicomEncoding);
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1746 break;
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1747
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1748 case Json::arrayValue:
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1749 {
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1750 DcmTag key(tag.GetGroup(), tag.GetElement());
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1751 if (key.getEVR() != EVR_SQ)
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1752 {
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1753 throw OrthancException(ErrorCode_BadParameterType);
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1754 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1755
2287 9f3414878c02 Fix Debian #865606 (orthanc FTBFS with libdcmtk-dev 3.6.1~20170228-2) Sebastien Jodogne <s.jodogne@gmail.com> parents: 2275 diff changeset	1756 DcmSequenceOfItems* sequence = new DcmSequenceOfItems(key);
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1757 element.reset(sequence);
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1758
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1759 for (Json::Value::ArrayIndex i = 0; i < value.size(); i++)
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1760 {
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1761 std::auto_ptr<DcmItem> item(new DcmItem);
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1762
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1763 Json::Value::Members members = value[i].getMemberNames();
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1764 for (Json::Value::ArrayIndex j = 0; j < members.size(); j++)
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1765 {
1818 1065401501fb ParsedDicomFile::CreateFromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1792 diff changeset	1766 item->insert(FromJson(ParseTag(members[j]), value[i][members[j]], decodeDataUriScheme, dicomEncoding));
1690 ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1767 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1768
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1769 sequence->append(item.release());
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1770 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1771
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1772 break;
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1773 }
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1774
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1775 default:
ae09132e4237 FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1689 diff changeset	1776 throw OrthancException(ErrorCode_BadParameterType);
1689 26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1777 }
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1778
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1779 return element.release();
26083d84d237 refactoring Sebastien Jodogne <s.jodogne@gmail.com> parents: 1688 diff changeset	1780 }
1765 57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	1781
57b9e6890482 New configuration option: "Dictionary" to declare custom DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 1739 diff changeset	1782
1924 6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1783 DcmPixelSequence* FromDcmtkBridge::GetPixelSequence(DcmDataset& dataset)
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1784 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1785 DcmElement *element = NULL;
1927 b60f27664b8f simplification in FromDcmtkBridge Sebastien Jodogne <s.jodogne@gmail.com> parents: 1924 diff changeset	1786 if (!dataset.findAndGetElement(DCM_PixelData, element).good())
1924 6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1787 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1788 throw OrthancException(ErrorCode_BadFileFormat);
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1789 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1790
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1791 DcmPixelData& pixelData = dynamic_cast<DcmPixelData&>(*element);
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1792 DcmPixelSequence* pixelSequence = NULL;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1793 if (!pixelData.getEncapsulatedRepresentation
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1794 (dataset.getOriginalXfer(), NULL, pixelSequence).good())
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1795 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1796 return NULL;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1797 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1798 else
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1799 {
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1800 return pixelSequence;
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1801 }
6c73df12ca51 New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) Sebastien Jodogne <s.jodogne@gmail.com> parents: 1900 diff changeset	1802 }
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1803
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1804
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1805 Encoding FromDcmtkBridge::ExtractEncoding(const Json::Value& json,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1806 Encoding defaultEncoding)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1807 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1808 if (json.type() != Json::objectValue)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1809 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1810 throw OrthancException(ErrorCode_BadParameterType);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1811 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1812
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1813 Encoding encoding = defaultEncoding;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1814
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1815 const Json::Value::Members tags = json.getMemberNames();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1816
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1817 // Look for SpecificCharacterSet (0008,0005) in the JSON file
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1818 for (size_t i = 0; i < tags.size(); i++)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1819 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1820 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1821 if (tag == DICOM_TAG_SPECIFIC_CHARACTER_SET)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1822 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1823 const Json::Value& value = json[tags[i]];
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1824 if (value.type() != Json::stringValue \|\|
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1825 (value.asString().length() != 0 &&
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1826 !GetDicomEncoding(encoding, value.asCString())))
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1827 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1828 LOG(ERROR) << "Unknown encoding while creating DICOM from JSON: " << value;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1829 throw OrthancException(ErrorCode_BadRequest);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1830 }
2216 9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1831
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1832 if (value.asString().length() == 0)
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1833 {
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1834 return defaultEncoding;
9a8fab016145 sample worklist plugin fine-tuning the C-Find query Sebastien Jodogne <s.jodogne@gmail.com> parents: 2209 diff changeset	1835 }
1934 72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1836 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1837 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1838
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1839 return encoding;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1840 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1841
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1842
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1843 static void SetString(DcmDataset& target,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1844 const DcmTag& tag,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1845 const std::string& value)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1846 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1847 if (!target.putAndInsertString(tag, value.c_str()).good())
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1848 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1849 throw OrthancException(ErrorCode_InternalError);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1850 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1851 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1852
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1853
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1854 DcmDataset* FromDcmtkBridge::FromJson(const Json::Value& json, // Encoded using UTF-8
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1855 bool generateIdentifiers,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1856 bool decodeDataUriScheme,
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1857 Encoding defaultEncoding)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1858 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1859 std::auto_ptr<DcmDataset> result(new DcmDataset);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1860 Encoding encoding = ExtractEncoding(json, defaultEncoding);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1861
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1862 SetString(*result, DCM_SpecificCharacterSet, GetDicomSpecificCharacterSet(encoding));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1863
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1864 const Json::Value::Members tags = json.getMemberNames();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1865
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1866 bool hasPatientId = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1867 bool hasStudyInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1868 bool hasSeriesInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1869 bool hasSopInstanceUid = false;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1870
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1871 for (size_t i = 0; i < tags.size(); i++)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1872 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1873 DicomTag tag = FromDcmtkBridge::ParseTag(tags[i]);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1874 const Json::Value& value = json[tags[i]];
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1875
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1876 if (tag == DICOM_TAG_PATIENT_ID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1877 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1878 hasPatientId = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1879 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1880 else if (tag == DICOM_TAG_STUDY_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1881 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1882 hasStudyInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1883 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1884 else if (tag == DICOM_TAG_SERIES_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1885 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1886 hasSeriesInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1887 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1888 else if (tag == DICOM_TAG_SOP_INSTANCE_UID)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1889 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1890 hasSopInstanceUid = true;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1891 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1892
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1893 if (tag != DICOM_TAG_SPECIFIC_CHARACTER_SET)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1894 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1895 std::auto_ptr<DcmElement> element(FromDcmtkBridge::FromJson(tag, value, decodeDataUriScheme, encoding));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1896 const DcmTagKey& tag = element->getTag();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1897
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1898 result->findAndDeleteElement(tag);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1899
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1900 DcmElement* tmp = element.release();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1901 if (!result->insert(tmp, false, false).good())
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1902 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1903 delete tmp;
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1904 throw OrthancException(ErrorCode_InternalError);
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1905 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1906 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1907 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1908
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1909 if (!hasPatientId &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1910 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1911 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1912 SetString(*result, DCM_PatientID, GenerateUniqueIdentifier(ResourceType_Patient));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1913 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1914
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1915 if (!hasStudyInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1916 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1917 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1918 SetString(*result, DCM_StudyInstanceUID, GenerateUniqueIdentifier(ResourceType_Study));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1919 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1920
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1921 if (!hasSeriesInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1922 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1923 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1924 SetString(*result, DCM_SeriesInstanceUID, GenerateUniqueIdentifier(ResourceType_Series));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1925 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1926
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1927 if (!hasSopInstanceUid &&
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1928 generateIdentifiers)
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1929 {
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1930 SetString(*result, DCM_SOPInstanceUID, GenerateUniqueIdentifier(ResourceType_Instance));
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1931 }
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1932
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1933 return result.release();
72a2fd7fed8b FromDcmtkBridge::FromJson Sebastien Jodogne <s.jodogne@gmail.com> parents: 1930 diff changeset	1934 }
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1935
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1936
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1937 DcmFileFormat* FromDcmtkBridge::LoadFromMemoryBuffer(const void* buffer,
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1938 size_t size)
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1939 {
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1940 DcmInputBufferStream is;
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1941 if (size > 0)
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1942 {
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1943 is.setBuffer(buffer, size);
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1944 }
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1945 is.setEos();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1946
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1947 std::auto_ptr<DcmFileFormat> result(new DcmFileFormat);
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1948
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1949 result->transferInit();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1950 if (!result->read(is).good())
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1951 {
2431 14537babc1e6 print error if unable to parse DICOM Sebastien Jodogne <s.jodogne@gmail.com> parents: 2409 diff changeset	1952 LOG(ERROR) << "Cannot parse an invalid DICOM file (size: " << size << " bytes)";
1935 e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1953 throw OrthancException(ErrorCode_BadFileFormat);
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1954 }
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1955
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1956 result->loadAllDataIntoMemory();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1957 result->transferEnd();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1958
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1959 return result.release();
e251606c1433 FromDcmtkBridge::LoadFromMemoryBuffer Sebastien Jodogne <s.jodogne@gmail.com> parents: 1934 diff changeset	1960 }
1998 9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1961
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1962
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1963 void FromDcmtkBridge::FromJson(DicomMap& target,
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1964 const Json::Value& source)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1965 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1966 if (source.type() != Json::objectValue)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1967 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1968 throw OrthancException(ErrorCode_BadFileFormat);
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1969 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1970
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1971 target.Clear();
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1972
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1973 Json::Value::Members members = source.getMemberNames();
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1974
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1975 for (size_t i = 0; i < members.size(); i++)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1976 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1977 const Json::Value& value = source[members[i]];
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1978
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1979 if (value.type() != Json::stringValue)
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1980 {
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1981 throw OrthancException(ErrorCode_BadFileFormat);
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1982 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1983
2007 655489d9165d DicomMap::ParseDicomMetaInformation() Sebastien Jodogne <s.jodogne@gmail.com> parents: 2006 diff changeset	1984 target.SetValue(ParseTag(members[i]), value.asString(), false);
1998 9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1985 }
9b61701c35f2 New URI "/modalities/.../move" to issue C-Move SCU requests Sebastien Jodogne <s.jodogne@gmail.com> parents: 1981 diff changeset	1986 }
2207 6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1987
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1988
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1989 void FromDcmtkBridge::ChangeStringEncoding(DcmItem& dataset,
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1990 Encoding source,
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1991 Encoding target)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1992 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1993 // Recursive exploration of a dataset to change the encoding of
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1994 // each string-like element
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1995
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1996 if (source == target)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1997 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1998 return;
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	1999 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2000
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2001 for (unsigned long i = 0; i < dataset.card(); i++)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2002 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2003 DcmElement* element = dataset.getElement(i);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2004 if (element)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2005 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2006 if (element->isLeaf())
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2007 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2008 char *c = NULL;
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2009 if (element->isaString() &&
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2010 element->getString(c).good() &&
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2011 c != NULL)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2012 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2013 std::string a = Toolbox::ConvertToUtf8(c, source);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2014 std::string b = Toolbox::ConvertFromUtf8(a, target);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2015 element->putString(b.c_str());
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2016 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2017 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2018 else
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2019 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2020 // "All subclasses of DcmElement except for DcmSequenceOfItems
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2021 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2022 // etc. are not." The following dynamic_cast is thus OK.
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2023 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(*element);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2024
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2025 for (unsigned long j = 0; j < sequence.card(); j++)
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2026 {
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2027 ChangeStringEncoding(*sequence.getItem(j), source, target);
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2028 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2029 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2030 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2031 }
6dc3bdb4088b Fix handling of encodings in C-FIND for worklists Sebastien Jodogne <s.jodogne@gmail.com> parents: 2172 diff changeset	2032 }
2209 e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2033
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2034
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2035 bool FromDcmtkBridge::LookupTransferSyntax(std::string& result,
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2036 DcmFileFormat& dicom)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2037 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2038 const char* value = NULL;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2039
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2040 if (dicom.getMetaInfo() != NULL &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2041 dicom.getMetaInfo()->findAndGetString(DCM_TransferSyntaxUID, value).good() &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2042 value != NULL)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2043 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2044 result.assign(value);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2045 return true;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2046 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2047 else
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2048 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2049 return false;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2050 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata Sebastien Jodogne <s.jodogne@gmail.com> parents: 2207 diff changeset	2051 }
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2052
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2053
2232 3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi Sebastien Jodogne <s.jodogne@gmail.com> parents: 2218 diff changeset	2054 #if ORTHANC_ENABLE_LUA == 1
2218 3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2055 void FromDcmtkBridge::ExecuteToDicom(DicomMap& target,
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2056 LuaFunctionCall& call)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2057 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2058 Json::Value output;
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2059 call.ExecuteToJson(output, true /* keep strings */);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2060
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2061 target.Clear();
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2062
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2063 if (output.type() == Json::arrayValue &&
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2064 output.size() == 0)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2065 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2066 // This case happens for empty tables
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2067 return;
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2068 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2069
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2070 if (output.type() != Json::objectValue)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2071 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2072 LOG(ERROR) << "Lua: IncomingFindRequestFilter must return a table";
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2073 throw OrthancException(ErrorCode_LuaBadOutput);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2074 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2075
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2076 Json::Value::Members members = output.getMemberNames();
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2077
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2078 for (size_t i = 0; i < members.size(); i++)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2079 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2080 if (output[members[i]].type() != Json::stringValue)
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2081 {
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2082 LOG(ERROR) << "Lua: IncomingFindRequestFilter must return a table mapping names of DICOM tags to strings";
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2083 throw OrthancException(ErrorCode_LuaBadOutput);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2084 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2085
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2086 DicomTag tag(ParseTag(members[i]));
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2087 target.SetValue(tag, output[members[i]].asString(), false);
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2088 }
3eefb84ac0bd dynamically fix outgoing C-Find requests using "OutgoingFindRequestFilter()" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2216 diff changeset	2089 }
2232 3dd44baebc36 macro ORTHANC_ENABLE_LUA for orthanc-wsi Sebastien Jodogne <s.jodogne@gmail.com> parents: 2218 diff changeset	2090 #endif
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2091
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2092
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2093 void FromDcmtkBridge::ExtractDicomSummary(DicomMap& target,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2094 DcmItem& dataset)
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2095 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2096 ExtractDicomSummary(target, dataset,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2097 ORTHANC_MAXIMUM_TAG_LENGTH,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2098 GetDefaultDicomEncoding());
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2099 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2100
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2101
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2102 void FromDcmtkBridge::ExtractDicomAsJson(Json::Value& target,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2103 DcmDataset& dataset,
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2104 const std::set<DicomTag>& ignoreTagLength)
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2105 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2106 ExtractDicomAsJson(target, dataset,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2107 DicomToJsonFormat_Full,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2108 DicomToJsonFlags_Default,
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2109 ORTHANC_MAXIMUM_TAG_LENGTH,
2409 e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2110 GetDefaultDicomEncoding(),
e4045b3c9772 ignore-length argument if retrieving DICOM tags Sebastien Jodogne <s.jodogne@gmail.com> parents: 2382 diff changeset	2111 ignoreTagLength);
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2112 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2113
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2114
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2115 void FromDcmtkBridge::InitializeCodecs()
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2116 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2117 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
2528 832217e4e872 old warnings turned into info Sebastien Jodogne <s.jodogne@gmail.com> parents: 2522 diff changeset	2118 LOG(INFO) << "Registering JPEG Lossless codecs in DCMTK";
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2119 DJLSDecoderRegistration::registerCodecs();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2120 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2121
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2122 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
2528 832217e4e872 old warnings turned into info Sebastien Jodogne <s.jodogne@gmail.com> parents: 2522 diff changeset	2123 LOG(INFO) << "Registering JPEG codecs in DCMTK";
2381 b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2124 DJDecoderRegistration::registerCodecs();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2125 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2126 }
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2127
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2128
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2129 void FromDcmtkBridge::FinalizeCodecs()
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2130 {
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2131 #if ORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2132 // Unregister JPEG-LS codecs
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2133 DJLSDecoderRegistration::cleanup();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2134 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2135
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2136 #if ORTHANC_ENABLE_DCMTK_JPEG == 1
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2137 // Unregister JPEG codecs
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2138 DJDecoderRegistration::cleanup();
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2139 #endif
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration Sebastien Jodogne <s.jodogne@gmail.com> parents: 2364 diff changeset	2140 }
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2141
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2142
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2143
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2144 // Forward declaration
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2145 static void ApplyVisitorToElement(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2146 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2147 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2148 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2149 Encoding encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2150
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2151 static void ApplyVisitorToDataset(DcmItem& dataset,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2152 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2153 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2154 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2155 Encoding encoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2156 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2157 assert(parentTags.size() == parentIndexes.size());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2158
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2159 for (unsigned long i = 0; i < dataset.card(); i++)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2160 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2161 DcmElement* element = dataset.getElement(i);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2162 if (element == NULL)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2163 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2164 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2165 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2166 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2167 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2168 ApplyVisitorToElement(*element, visitor, parentTags, parentIndexes, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2169 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2170 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2171 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2172
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2173
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2174 static void ApplyVisitorToLeaf(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2175 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2176 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2177 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2178 const DicomTag& tag,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2179 Encoding encoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2180 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2181 // TODO - Merge this function with ConvertLeafElement()
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2182
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2183 assert(element.isLeaf());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2184
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2185 DcmEVR evr = element.getTag().getEVR();
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2186 ValueRepresentation vr = FromDcmtkBridge::Convert(evr);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2187
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2188 char *c = NULL;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2189 if (element.isaString() &&
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2190 element.getString(c).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2191 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2192 std::string utf8;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2193
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2194 if (c != NULL) // This case corresponds to the empty string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2195 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2196 std::string s(c);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2197 utf8 = Toolbox::ConvertToUtf8(s, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2198 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2199
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2200 std::string newValue;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2201 ITagVisitor::Action action = visitor.VisitString
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2202 (newValue, parentTags, parentIndexes, tag, vr, utf8);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2203
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2204 switch (action)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2205 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2206 case ITagVisitor::Action_None:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2207 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2208
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2209 case ITagVisitor::Action_Replace:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2210 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2211 std::string s = Toolbox::ConvertFromUtf8(newValue, encoding);
2522 ce2dfba9417c fix build with dcmtk 3.6.0 Sebastien Jodogne <s.jodogne@gmail.com> parents: 2513 diff changeset	2212 if (element.putString(s.c_str()) != EC_Normal)
2499 83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2213 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2214 LOG(ERROR) << "Cannot replace value of tag: " << tag.Format();
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2215 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2216 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2217
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2218 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2219 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2220
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2221 default:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2222 throw OrthancException(ErrorCode_InternalError);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2223 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2224
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2225 return; // We're done
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2226 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2227
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2228
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2229 try
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2230 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2231 // http://support.dcmtk.org/docs/dcvr_8h-source.html
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2232 switch (element.getVR())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2233 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2234
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2235 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2236 * Deal with binary data (including PixelData).
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2237 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2238
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2239 case EVR_OB: // other byte
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2240 case EVR_OF: // other float
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2241 case EVR_OW: // other word
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2242 case EVR_UN: // unknown value representation
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2243 case EVR_ox: // OB or OW depending on context
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2244 case EVR_DS: // decimal string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2245 case EVR_IS: // integer string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2246 case EVR_AS: // age string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2247 case EVR_DA: // date string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2248 case EVR_DT: // date time string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2249 case EVR_TM: // time string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2250 case EVR_AE: // application entity title
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2251 case EVR_CS: // code string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2252 case EVR_SH: // short string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2253 case EVR_LO: // long string
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2254 case EVR_ST: // short text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2255 case EVR_LT: // long text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2256 case EVR_UT: // unlimited text
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2257 case EVR_PN: // person name
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2258 case EVR_UI: // unique identifier
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2259 case EVR_UNKNOWN: // used internally for elements with unknown VR (encoded with 4-byte length field in explicit VR)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2260 case EVR_UNKNOWN2B: // used internally for elements with unknown VR with 2-byte length field in explicit VR
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2261 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2262 Uint8* data = NULL;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2263
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2264 if (element.getUint8Array(data) == EC_Normal)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2265 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2266 visitor.VisitBinary(parentTags, parentIndexes, tag, vr, data, element.getLength());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2267 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2268 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2269 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2270 visitor.VisitUnknown(parentTags, parentIndexes, tag, vr);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2271 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2272
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2273 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2274 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2275
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2276 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2277 * Numeric types
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2278 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2279
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2280 case EVR_SL: // signed long
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2281 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2282 Sint32 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2283 if (dynamic_cast<DcmSignedLong&>(element).getSint32(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2284 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2285 visitor.VisitInteger(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2286 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2287
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2288 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2289 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2290
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2291 case EVR_SS: // signed short
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2292 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2293 Sint16 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2294 if (dynamic_cast<DcmSignedShort&>(element).getSint16(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2295 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2296 visitor.VisitInteger(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2297 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2298
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2299 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2300 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2301
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2302 case EVR_UL: // unsigned long
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2303 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2304 Uint32 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2305 if (dynamic_cast<DcmUnsignedLong&>(element).getUint32(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2306 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2307 visitor.VisitInteger(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2308 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2309
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2310 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2311 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2312
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2313 case EVR_US: // unsigned short
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2314 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2315 Uint16 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2316 if (dynamic_cast<DcmUnsignedShort&>(element).getUint16(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2317 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2318 visitor.VisitInteger(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2319 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2320
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2321 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2322 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2323
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2324 case EVR_FL: // float single-precision
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2325 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2326 Float32 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2327 if (dynamic_cast<DcmFloatingPointSingle&>(element).getFloat32(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2328 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2329 visitor.VisitDouble(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2330 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2331
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2332 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2333 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2334
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2335 case EVR_FD: // float double-precision
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2336 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2337 Float64 f;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2338 if (dynamic_cast<DcmFloatingPointDouble&>(element).getFloat64(f).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2339 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2340 visitor.VisitDouble(parentTags, parentIndexes, tag, vr, f);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2341 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2342
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2343 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2344 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2345
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2346
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2347 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2348 * Attribute tag.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2349 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2350
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2351 case EVR_AT:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2352 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2353 DcmTagKey tagKey;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2354 if (dynamic_cast<DcmAttributeTag&>(element).getTagVal(tagKey, 0).good())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2355 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2356 DicomTag t(tagKey.getGroup(), tagKey.getElement());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2357 visitor.VisitAttribute(parentTags, parentIndexes, tag, vr, t);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2358 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2359
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2360 break;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2361 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2362
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2363
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2364 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2365 * Sequence types, should never occur at this point because of
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2366 * "element.isLeaf()".
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2367 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2368
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2369 case EVR_SQ: // sequence of items
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2370 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2371
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2372
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2373 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2374 * Internal to DCMTK.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2375 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2376
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2377 case EVR_xs: // SS or US depending on context
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2378 case EVR_lt: // US, SS or OW depending on context, used for LUT Data (thus the name)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2379 case EVR_na: // na="not applicable", for data which has no VR
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2380 case EVR_up: // up="unsigned pointer", used internally for DICOMDIR suppor
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2381 case EVR_item: // used internally for items
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2382 case EVR_metainfo: // used internally for meta info datasets
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2383 case EVR_dataset: // used internally for datasets
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2384 case EVR_fileFormat: // used internally for DICOM files
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2385 case EVR_dicomDir: // used internally for DICOMDIR objects
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2386 case EVR_dirRecord: // used internally for DICOMDIR records
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2387 case EVR_pixelSQ: // used internally for pixel sequences in a compressed image
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2388 case EVR_pixelItem: // used internally for pixel items in a compressed image
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2389 case EVR_PixelData: // used internally for uncompressed pixeld data
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2390 case EVR_OverlayData: // used internally for overlay data
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2391 visitor.VisitUnknown(parentTags, parentIndexes, tag, vr);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2392 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2393
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2394
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2395 /**
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2396 * Default case.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2397 **/
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2398
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2399 default:
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2400 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2401 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2402 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2403 catch (boost::bad_lexical_cast&)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2404 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2405 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2406 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2407 catch (std::bad_cast&)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2408 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2409 return;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2410 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2411 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2412
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2413
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2414 static void ApplyVisitorToElement(DcmElement& element,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2415 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2416 const std::vector<DicomTag>& parentTags,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2417 const std::vector<size_t>& parentIndexes,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2418 Encoding encoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2419 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2420 assert(parentTags.size() == parentIndexes.size());
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2421
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2422 DicomTag tag(FromDcmtkBridge::Convert(element.getTag()));
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2423
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2424 if (element.isLeaf())
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2425 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2426 ApplyVisitorToLeaf(element, visitor, parentTags, parentIndexes, tag, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2427 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2428 else
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2429 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2430 // "All subclasses of DcmElement except for DcmSequenceOfItems
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2431 // are leaf nodes, while DcmSequenceOfItems, DcmItem, DcmDataset
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2432 // etc. are not." The following dynamic_cast is thus OK.
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2433 DcmSequenceOfItems& sequence = dynamic_cast<DcmSequenceOfItems&>(element);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2434
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2435 std::vector<DicomTag> tags = parentTags;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2436 std::vector<size_t> indexes = parentIndexes;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2437 tags.push_back(tag);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2438 indexes.push_back(0);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2439
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2440 for (unsigned long i = 0; i < sequence.card(); i++)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2441 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2442 indexes.back() = static_cast<size_t>(i);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2443 DcmItem* child = sequence.getItem(i);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2444 ApplyVisitorToDataset(*child, visitor, tags, indexes, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2445 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2446 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2447 }
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2448
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2449
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2450 void FromDcmtkBridge::Apply(DcmItem& dataset,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2451 ITagVisitor& visitor,
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2452 Encoding defaultEncoding)
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2453 {
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2454 std::vector<DicomTag> parentTags;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2455 std::vector<size_t> parentIndexes;
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2456 Encoding encoding = DetectEncoding(dataset, defaultEncoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2457 ApplyVisitorToDataset(dataset, visitor, parentTags, parentIndexes, encoding);
83b8b6743531 ITagVisitor - for anonymization relationships Sebastien Jodogne <s.jodogne@gmail.com> parents: 2470 diff changeset	2458 }
0 3959d33612cc initial commit Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	2459 }

Mercurial > hg > orthanc

annotate Core/DicomParsing/FromDcmtkBridge.cpp @ 2573:3372c5255333 jobs