Mercurial > hg > orthanc
annotate OrthancServer/Sources/ServerContext.h @ 4645:1f90fe0fa13f
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author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Wed, 28 Apr 2021 16:40:36 +0200 |
parents | 66109d24d26e |
children | da1edb7d6332 |
rev | line source |
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224 | 1 /** |
2 * Orthanc - A Lightweight, RESTful DICOM Store | |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
224 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
8 * modify it under the terms of the GNU General Public License as | |
9 * published by the Free Software Foundation, either version 3 of the | |
10 * License, or (at your option) any later version. | |
11 * | |
12 * In addition, as a special exception, the copyright holders of this | |
13 * program give permission to link the code of its release with the | |
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
15 * that use the same license as the "OpenSSL" library), and distribute | |
16 * the linked executables. You must obey the GNU General Public License | |
17 * in all respects for all of the code used other than "OpenSSL". If you | |
18 * modify file(s) with this exception, you may extend this exception to | |
19 * your version of the file(s), but you are not obligated to do so. If | |
20 * you do not wish to do so, delete this exception statement from your | |
21 * version. If you delete this exception statement from all source files | |
22 * in the program, then also delete it here. | |
23 * | |
24 * This program is distributed in the hope that it will be useful, but | |
25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
27 * General Public License for more details. | |
28 * | |
29 * You should have received a copy of the GNU General Public License | |
30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
31 **/ | |
32 | |
33 | |
34 #pragma once | |
35 | |
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36 #include "IServerListener.h" |
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37 #include "LuaScripting.h" |
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38 #include "OrthancHttpHandler.h" |
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39 #include "ServerIndex.h" |
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40 #include "ServerJobs/IStorageCommitmentFactory.h" |
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41 |
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42 #include "../../OrthancFramework/Sources/DicomFormat/DicomElement.h" |
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43 #include "../../OrthancFramework/Sources/DicomParsing/DicomModification.h" |
4045 | 44 #include "../../OrthancFramework/Sources/DicomParsing/IDicomTranscoder.h" |
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45 #include "../../OrthancFramework/Sources/DicomParsing/ParsedDicomCache.h" |
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46 #include "../../OrthancFramework/Sources/MultiThreading/Semaphore.h" |
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47 |
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48 |
224 | 49 namespace Orthanc |
50 { | |
3097 | 51 class DicomInstanceToStore; |
52 class IStorageArea; | |
53 class JobsEngine; | |
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54 class MetricsRegistry; |
3085 | 55 class OrthancPlugins; |
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56 class ParsedDicomFile; |
3097 | 57 class RestApiOutput; |
58 class SetOfInstancesJob; | |
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59 class SharedArchive; |
3097 | 60 class SharedMessageQueue; |
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61 class StorageCommitmentReports; |
3097 | 62 |
3085 | 63 |
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64 /** |
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65 * This class is responsible for maintaining the storage area on the |
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66 * filesystem (including compression), as well as the index of the |
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67 * DICOM store. It implements the required locking mechanisms. |
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68 **/ |
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69 class ServerContext : |
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70 public IStorageCommitmentFactory, |
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71 public IDicomTranscoder, |
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72 private JobsRegistry::IObserver |
224 | 73 { |
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74 friend class ServerIndex; // To access "RemoveFile()" |
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75 |
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76 public: |
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77 class ILookupVisitor : public boost::noncopyable |
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78 { |
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79 public: |
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80 virtual ~ILookupVisitor() |
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81 { |
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82 } |
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83 |
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84 virtual bool IsDicomAsJsonNeeded() const = 0; |
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85 |
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86 virtual void MarkAsComplete() = 0; |
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87 |
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88 // NB: "dicomAsJson" must *not* be deleted, and can be NULL if |
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89 // "!IsDicomAsJsonNeeded()" |
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90 virtual void Visit(const std::string& publicId, |
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91 const std::string& instanceId, |
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92 const DicomMap& mainDicomTags, |
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93 const Json::Value* dicomAsJson) = 0; |
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94 }; |
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95 |
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96 |
224 | 97 private: |
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98 class LuaServerListener : public IServerListener |
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99 { |
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100 private: |
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101 ServerContext& context_; |
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102 |
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103 public: |
4204 | 104 explicit LuaServerListener(ServerContext& context) : |
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105 context_(context) |
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106 { |
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107 } |
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108 |
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109 virtual void SignalStoredInstance(const std::string& publicId, |
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110 const DicomInstanceToStore& instance, |
4205 | 111 const Json::Value& simplifiedTags) ORTHANC_OVERRIDE |
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112 { |
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113 context_.mainLua_.SignalStoredInstance(publicId, instance, simplifiedTags); |
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114 } |
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115 |
4205 | 116 virtual void SignalChange(const ServerIndexChange& change) ORTHANC_OVERRIDE |
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117 { |
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118 context_.mainLua_.SignalChange(change); |
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119 } |
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120 |
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121 virtual bool FilterIncomingInstance(const DicomInstanceToStore& instance, |
4205 | 122 const Json::Value& simplified) ORTHANC_OVERRIDE |
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123 { |
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124 return context_.filterLua_.FilterIncomingInstance(instance, simplified); |
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125 } |
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126 }; |
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127 |
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128 class ServerListener |
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129 { |
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130 private: |
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131 IServerListener *listener_; |
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132 std::string description_; |
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133 |
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134 public: |
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135 ServerListener(IServerListener& listener, |
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136 const std::string& description) : |
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137 listener_(&listener), |
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138 description_(description) |
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139 { |
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140 } |
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141 |
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142 IServerListener& GetListener() |
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143 { |
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144 return *listener_; |
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145 } |
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146 |
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147 const std::string& GetDescription() |
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148 { |
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149 return description_; |
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150 } |
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151 }; |
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152 |
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153 typedef std::list<ServerListener> ServerListeners; |
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154 |
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155 |
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156 static void ChangeThread(ServerContext* that, |
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157 unsigned int sleepDelay); |
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158 |
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159 static void SaveJobsThread(ServerContext* that, |
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160 unsigned int sleepDelay); |
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161 |
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162 void SaveJobsEngine(); |
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163 |
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164 virtual void SignalJobSubmitted(const std::string& jobId) ORTHANC_OVERRIDE; |
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165 |
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166 virtual void SignalJobSuccess(const std::string& jobId) ORTHANC_OVERRIDE; |
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167 |
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168 virtual void SignalJobFailure(const std::string& jobId) ORTHANC_OVERRIDE; |
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169 |
224 | 170 ServerIndex index_; |
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171 IStorageArea& area_; |
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172 |
236 | 173 bool compressionEnabled_; |
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174 bool storeMD5_; |
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175 |
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176 Semaphore largeDicomThrottler_; // New in Orthanc 1.9.0 (notably for very large DICOM files in WSI) |
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177 ParsedDicomCache dicomCache_; |
224 | 178 |
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179 LuaScripting mainLua_; |
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180 LuaScripting filterLua_; |
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181 LuaServerListener luaListener_; |
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182 std::unique_ptr<SharedArchive> mediaArchive_; |
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183 |
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184 // The "JobsEngine" must be *after* "LuaScripting", as |
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185 // "LuaScripting" embeds "LuaJobManager" that registers as an |
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186 // observer to "SequenceOfOperationsJob", whose lifetime |
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187 // corresponds to that of "JobsEngine". It must also be after |
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188 // "mediaArchive_", as jobs might access this archive. |
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189 JobsEngine jobsEngine_; |
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190 |
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191 #if ORTHANC_ENABLE_PLUGINS == 1 |
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192 OrthancPlugins* plugins_; |
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193 #endif |
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194 |
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195 ServerListeners listeners_; |
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196 boost::shared_mutex listenersMutex_; |
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197 |
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198 bool done_; |
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199 bool haveJobsChanged_; |
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200 bool isJobsEngineUnserialized_; |
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201 SharedMessageQueue pendingChanges_; |
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202 boost::thread changeThread_; |
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203 boost::thread saveJobsThread_; |
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204 |
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205 std::unique_ptr<SharedArchive> queryRetrieveArchive_; |
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206 std::string defaultLocalAet_; |
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207 OrthancHttpHandler httpHandler_; |
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208 bool saveJobs_; |
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209 FindStorageAccessMode findStorageAccessMode_; |
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210 unsigned int limitFindInstances_; |
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211 unsigned int limitFindResults_; |
1368 | 212 |
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213 std::unique_ptr<MetricsRegistry> metricsRegistry_; |
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214 bool isHttpServerSecure_; |
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215 bool isExecuteLuaEnabled_; |
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216 bool overwriteInstances_; |
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217 |
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218 std::unique_ptr<StorageCommitmentReports> storageCommitmentReports_; |
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219 |
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220 bool transcodeDicomProtocol_; |
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221 std::unique_ptr<IDicomTranscoder> dcmtkTranscoder_; |
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222 BuiltinDecoderTranscoderOrder builtinDecoderTranscoderOrder_; |
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223 bool isIngestTranscoding_; |
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224 DicomTransferSyntax ingestTransferSyntax_; |
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225 bool ingestTranscodingOfUncompressed_; |
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226 bool ingestTranscodingOfCompressed_; |
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227 |
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228 // New in Orthanc 1.9.0 |
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229 DicomTransferSyntax preferredTransferSyntax_; |
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230 boost::mutex dynamicOptionsMutex_; |
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231 bool isUnknownSopClassAccepted_; |
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232 std::set<DicomTransferSyntax> acceptedTransferSyntaxes_; |
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233 |
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234 StoreStatus StoreAfterTranscoding(std::string& resultPublicId, |
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235 DicomInstanceToStore& dicom, |
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236 StoreInstanceMode mode); |
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237 |
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238 void ApplyInternal(ILookupVisitor& visitor, |
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239 const DatabaseLookup& lookup, |
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240 ResourceType queryLevel, |
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241 size_t since, |
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242 size_t limit); |
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243 |
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244 void PublishDicomCacheMetrics(); |
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245 |
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246 // This method must only be called from "ServerIndex"! |
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247 void RemoveFile(const std::string& fileUuid, |
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248 FileContentType type); |
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249 |
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250 // This DicomModification object is intended to be used as a |
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251 // "rules engine" when de-identifying logs for C-Find, C-Get, and |
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252 // C-Move queries (new in Orthanc 1.8.2) |
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253 DicomModification logsDeidentifierRules_; |
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254 bool deidentifyLogs_; |
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255 |
224 | 256 public: |
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257 class DicomCacheLocker : public boost::noncopyable |
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258 { |
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259 private: |
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260 ServerContext& context_; |
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261 std::string instancePublicId_; |
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262 std::unique_ptr<ParsedDicomCache::Accessor> accessor_; |
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263 std::unique_ptr<ParsedDicomFile> dicom_; |
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264 size_t dicomSize_; |
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265 std::unique_ptr<Semaphore::Locker> largeDicomLocker_; |
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266 |
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267 public: |
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268 DicomCacheLocker(ServerContext& context, |
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269 const std::string& instancePublicId); |
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270 |
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271 ~DicomCacheLocker(); |
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272 |
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273 ParsedDicomFile& GetDicom() const; |
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274 }; |
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275 |
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276 ServerContext(IDatabaseWrapper& database, |
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277 IStorageArea& area, |
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278 bool unitTesting, |
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279 size_t maxCompletedJobs); |
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280 |
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281 ~ServerContext(); |
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282 |
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283 void SetupJobsEngine(bool unitTesting, |
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284 bool loadJobsFromDatabase); |
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285 |
224 | 286 ServerIndex& GetIndex() |
287 { | |
288 return index_; | |
289 } | |
290 | |
236 | 291 void SetCompressionEnabled(bool enabled); |
292 | |
293 bool IsCompressionEnabled() const | |
294 { | |
295 return compressionEnabled_; | |
296 } | |
297 | |
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298 bool AddAttachment(int64_t& newRevision, |
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299 const std::string& resourceId, |
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300 FileContentType attachmentType, |
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301 const void* data, |
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302 size_t size, |
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303 bool hasOldRevision, |
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304 int64_t oldRevision, |
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305 const std::string& oldMD5); |
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306 |
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307 StoreStatus Store(std::string& resultPublicId, |
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308 DicomInstanceToStore& dicom, |
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309 StoreInstanceMode mode); |
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310 |
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311 void AnswerAttachment(RestApiOutput& output, |
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312 const std::string& resourceId, |
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313 FileContentType content); |
226
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314 |
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315 void ChangeAttachmentCompression(const std::string& resourceId, |
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316 FileContentType attachmentType, |
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317 CompressionType compression); |
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318 |
2124 | 319 void ReadDicomAsJson(Json::Value& result, |
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320 const std::string& instancePublicId, |
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321 const std::set<DicomTag>& ignoreTagLength); |
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322 |
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323 void ReadDicomAsJson(Json::Value& result, |
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324 const std::string& instancePublicId); |
227
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325 |
2124 | 326 void ReadDicom(std::string& dicom, |
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327 const std::string& instancePublicId); |
2124 | 328 |
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329 bool ReadDicomUntilPixelData(std::string& dicom, |
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330 const std::string& instancePublicId); |
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331 |
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332 // This method is for low-level operations on "/instances/.../attachments/..." |
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333 void ReadAttachment(std::string& result, |
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334 int64_t& revision, |
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335 const std::string& instancePublicId, |
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336 FileContentType content, |
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337 bool uncompressIfNeeded); |
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338 |
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339 void SetStoreMD5ForAttachments(bool storeMD5); |
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340 |
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341 bool IsStoreMD5ForAttachments() const |
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342 { |
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343 return storeMD5_; |
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344 } |
771 | 345 |
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346 JobsEngine& GetJobsEngine() |
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347 { |
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348 return jobsEngine_; |
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349 } |
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350 |
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351 bool DeleteResource(Json::Value& target, |
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352 const std::string& uuid, |
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353 ResourceType expectedType); |
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354 |
1198 | 355 void SignalChange(const ServerIndexChange& change); |
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356 |
1368 | 357 SharedArchive& GetQueryRetrieveArchive() |
358 { | |
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359 return *queryRetrieveArchive_; |
1368 | 360 } |
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361 |
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MediaArchiveSize configuration option
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362 SharedArchive& GetMediaArchive() |
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363 { |
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364 return *mediaArchive_; |
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365 } |
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366 |
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367 const std::string& GetDefaultLocalApplicationEntityTitle() const |
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368 { |
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369 return defaultLocalAet_; |
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370 } |
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371 |
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372 LuaScripting& GetLuaScripting() |
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373 { |
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374 return mainLua_; |
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375 } |
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376 |
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377 OrthancHttpHandler& GetHttpHandler() |
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378 { |
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379 return httpHandler_; |
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380 } |
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381 |
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382 void Stop(); |
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383 |
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384 void Apply(ILookupVisitor& visitor, |
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385 const DatabaseLookup& lookup, |
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386 ResourceType queryLevel, |
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387 size_t since, |
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388 size_t limit); |
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389 |
3015
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390 bool LookupOrReconstructMetadata(std::string& target, |
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391 const std::string& publicId, |
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392 ResourceType level, |
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393 MetadataType type); |
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394 |
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395 |
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396 /** |
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397 * Management of the plugins |
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398 **/ |
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399 |
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400 #if ORTHANC_ENABLE_PLUGINS == 1 |
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401 void SetPlugins(OrthancPlugins& plugins); |
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402 |
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403 void ResetPlugins(); |
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404 |
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|
405 const OrthancPlugins& GetPlugins() const; |
1741
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406 |
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|
407 OrthancPlugins& GetPlugins(); |
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408 #endif |
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409 |
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410 bool HasPlugins() const; |
2626 | 411 |
412 void AddChildInstances(SetOfInstancesJob& job, | |
413 const std::string& publicId); | |
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414 |
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415 void SignalUpdatedModalities(); |
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416 |
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|
417 void SignalUpdatedPeers(); |
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418 |
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|
419 MetricsRegistry& GetMetricsRegistry() |
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420 { |
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421 return *metricsRegistry_; |
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422 } |
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423 |
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|
424 void SetHttpServerSecure(bool isSecure) |
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425 { |
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|
426 isHttpServerSecure_ = isSecure; |
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427 } |
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428 |
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|
429 bool IsHttpServerSecure() const |
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430 { |
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431 return isHttpServerSecure_; |
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432 } |
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433 |
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|
434 void SetExecuteLuaEnabled(bool enabled) |
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435 { |
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436 isExecuteLuaEnabled_ = enabled; |
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437 } |
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438 |
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439 bool IsExecuteLuaEnabled() const |
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440 { |
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441 return isExecuteLuaEnabled_; |
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442 } |
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443 |
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444 void SetOverwriteInstances(bool overwrite) |
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445 { |
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446 overwriteInstances_ = overwrite; |
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447 } |
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448 |
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449 bool IsOverwriteInstances() const |
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450 { |
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451 return overwriteInstances_; |
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452 } |
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453 |
3660
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454 virtual IStorageCommitmentFactory::ILookupHandler* |
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455 CreateStorageCommitment(const std::string& jobId, |
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456 const std::string& transactionUid, |
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|
457 const std::vector<std::string>& sopClassUids, |
3662
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458 const std::vector<std::string>& sopInstanceUids, |
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|
459 const std::string& remoteAet, |
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|
460 const std::string& calledAet) ORTHANC_OVERRIDE; |
3736
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|
461 |
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462 StorageCommitmentReports& GetStorageCommitmentReports() |
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463 { |
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464 return *storageCommitmentReports_; |
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465 } |
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466 |
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467 ImageAccessor* DecodeDicomFrame(const std::string& publicId, |
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468 unsigned int frameIndex); |
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469 |
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470 ImageAccessor* DecodeDicomFrame(const DicomInstanceToStore& dicom, |
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471 unsigned int frameIndex); |
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|
472 |
3980
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Fix decoding of DICOM images for plugins
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|
473 ImageAccessor* DecodeDicomFrame(const void* dicom, |
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Fix decoding of DICOM images for plugins
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|
474 size_t size, |
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|
475 unsigned int frameIndex); |
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476 |
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|
477 void StoreWithTranscoding(std::string& sopClassUid, |
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478 std::string& sopInstanceUid, |
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479 DicomStoreUserConnection& connection, |
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480 const std::string& dicom, |
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|
481 bool hasMoveOriginator, |
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482 const std::string& moveOriginatorAet, |
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483 uint16_t moveOriginatorId); |
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|
484 |
3930
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3928
diff
changeset
|
485 // This method can be used even if the global option |
3911
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|
486 // "TranscodeDicomProtocol" is set to "false" |
3944
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487 virtual bool Transcode(DicomImage& target, |
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488 DicomImage& source /* in, "GetParsed()" possibly modified */, |
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489 const std::set<DicomTransferSyntax>& allowedSyntaxes, |
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|
490 bool allowNewSopInstanceUid) ORTHANC_OVERRIDE; |
3959
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|
491 |
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492 bool IsTranscodeDicomProtocol() const |
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493 { |
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494 return transcodeDicomProtocol_; |
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|
495 } |
4375
208029732d51
New config option "DeidentifyDimseQueryLogs"
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|
496 |
4376
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diff
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|
497 const std::string& GetDeidentifiedContent(const DicomElement& element) const; |
4473
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498 |
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|
499 void GetAcceptedTransferSyntaxes(std::set<DicomTransferSyntax>& syntaxes); |
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|
500 |
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|
501 void SetAcceptedTransferSyntaxes(const std::set<DicomTransferSyntax>& syntaxes); |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
502 |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
503 bool IsUnknownSopClassAccepted(); |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
504 |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
505 void SetUnknownSopClassAccepted(bool accepted); |
224 | 506 }; |
507 } |