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annotate OrthancServer/Sources/ServerContext.h @ 4375:208029732d51 varian

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New config option "DeidentifyDimseQueryLogs"
author Mark Poscablo <Mark.Poscablo@varian.com>
date Tue, 15 Dec 2020 13:59:01 -0500
parents d962a2996637
children b002f9abe802
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License as
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9 * published by the Free Software Foundation, either version 3 of the
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10 * License, or (at your option) any later version.
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11 *
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12 * In addition, as a special exception, the copyright holders of this
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13 * program give permission to link the code of its release with the
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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15 * that use the same license as the "OpenSSL" library), and distribute
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16 * the linked executables. You must obey the GNU General Public License
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17 * in all respects for all of the code used other than "OpenSSL". If you
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18 * modify file(s) with this exception, you may extend this exception to
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19 * your version of the file(s), but you are not obligated to do so. If
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20 * you do not wish to do so, delete this exception statement from your
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21 * version. If you delete this exception statement from all source files
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22 * in the program, then also delete it here.
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23 *
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24 * This program is distributed in the hope that it will be useful, but
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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27 * General Public License for more details.
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28 *
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29 * You should have received a copy of the GNU General Public License
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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31 **/
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32
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33
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34 #pragma once
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35
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36 #include "IServerListener.h"
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37 #include "LuaScripting.h"
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38 #include "OrthancHttpHandler.h"
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39 #include "ServerIndex.h"
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40 #include "ServerJobs/IStorageCommitmentFactory.h"
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41
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42 #include "../../OrthancFramework/Sources/Cache/MemoryCache.h"
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43 #include "../../OrthancFramework/Sources/DicomFormat/DicomElement.h"
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44 #include "../../OrthancFramework/Sources/DicomParsing/DicomModification.h"
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45 #include "../../OrthancFramework/Sources/DicomParsing/IDicomTranscoder.h"
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46
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47
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48 namespace Orthanc
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49 {
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50 class DicomInstanceToStore;
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51 class IStorageArea;
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52 class JobsEngine;
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53 class MetricsRegistry;
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54 class OrthancPlugins;
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55 class ParsedDicomFile;
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56 class RestApiOutput;
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57 class SetOfInstancesJob;
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58 class SharedArchive;
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59 class SharedMessageQueue;
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60 class StorageCommitmentReports;
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61
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62
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63 /**
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64 * This class is responsible for maintaining the storage area on the
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65 * filesystem (including compression), as well as the index of the
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66 * DICOM store. It implements the required locking mechanisms.
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67 **/
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68 class ServerContext :
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69 public IStorageCommitmentFactory,
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70 public IDicomTranscoder,
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71 private JobsRegistry::IObserver
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72 {
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73 public:
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74 class ILookupVisitor : public boost::noncopyable
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75 {
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76 public:
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77 virtual ~ILookupVisitor()
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78 {
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79 }
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80
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81 virtual bool IsDicomAsJsonNeeded() const = 0;
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82
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83 virtual void MarkAsComplete() = 0;
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84
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85 // NB: "dicomAsJson" must *not* be deleted, and can be NULL if
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86 // "!IsDicomAsJsonNeeded()"
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87 virtual void Visit(const std::string& publicId,
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88 const std::string& instanceId,
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89 const DicomMap& mainDicomTags,
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90 const Json::Value* dicomAsJson) = 0;
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91 };
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92
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93
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94 private:
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95 class LuaServerListener : public IServerListener
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96 {
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97 private:
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98 ServerContext& context_;
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99
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100 public:
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101 explicit LuaServerListener(ServerContext& context) :
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102 context_(context)
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103 {
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104 }
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105
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106 virtual void SignalStoredInstance(const std::string& publicId,
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107 const DicomInstanceToStore& instance,
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108 const Json::Value& simplifiedTags) ORTHANC_OVERRIDE
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109 {
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110 context_.mainLua_.SignalStoredInstance(publicId, instance, simplifiedTags);
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111 }
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112
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113 virtual void SignalChange(const ServerIndexChange& change) ORTHANC_OVERRIDE
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114 {
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115 context_.mainLua_.SignalChange(change);
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116 }
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117
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118 virtual bool FilterIncomingInstance(const DicomInstanceToStore& instance,
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119 const Json::Value& simplified) ORTHANC_OVERRIDE
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120 {
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121 return context_.filterLua_.FilterIncomingInstance(instance, simplified);
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122 }
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123 };
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124
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125 class DicomCacheProvider : public Deprecated::ICachePageProvider // TODO
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126 {
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127 private:
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128 ServerContext& context_;
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129
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130 public:
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131 explicit DicomCacheProvider(ServerContext& context) : context_(context)
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132 {
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133 }
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134
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135 virtual IDynamicObject* Provide(const std::string& id) ORTHANC_OVERRIDE;
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136 };
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137
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138 class ServerListener
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139 {
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140 private:
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141 IServerListener *listener_;
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142 std::string description_;
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143
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144 public:
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145 ServerListener(IServerListener& listener,
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146 const std::string& description) :
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147 listener_(&listener),
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148 description_(description)
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149 {
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150 }
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151
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152 IServerListener& GetListener()
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153 {
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154 return *listener_;
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155 }
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156
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157 const std::string& GetDescription()
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158 {
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159 return description_;
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160 }
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161 };
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162
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163 typedef std::list<ServerListener> ServerListeners;
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164
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165
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166 static void ChangeThread(ServerContext* that,
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167 unsigned int sleepDelay);
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168
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169 static void SaveJobsThread(ServerContext* that,
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170 unsigned int sleepDelay);
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171
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172 void ReadDicomAsJsonInternal(std::string& result,
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173 const std::string& instancePublicId);
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174
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175 void SaveJobsEngine();
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176
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177 virtual void SignalJobSubmitted(const std::string& jobId) ORTHANC_OVERRIDE;
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178
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179 virtual void SignalJobSuccess(const std::string& jobId) ORTHANC_OVERRIDE;
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180
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181 virtual void SignalJobFailure(const std::string& jobId) ORTHANC_OVERRIDE;
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182
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183 ServerIndex index_;
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184 IStorageArea& area_;
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185
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186 bool compressionEnabled_;
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187 bool storeMD5_;
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188
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189 DicomCacheProvider provider_;
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190 boost::mutex dicomCacheMutex_;
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191 Deprecated::MemoryCache dicomCache_; // TODO
224
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192
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193 LuaScripting mainLua_;
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194 LuaScripting filterLua_;
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195 LuaServerListener luaListener_;
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196 std::unique_ptr<SharedArchive> mediaArchive_;
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197
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198 // The "JobsEngine" must be *after* "LuaScripting", as
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199 // "LuaScripting" embeds "LuaJobManager" that registers as an
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200 // observer to "SequenceOfOperationsJob", whose lifetime
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201 // corresponds to that of "JobsEngine". It must also be after
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202 // "mediaArchive_", as jobs might access this archive.
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203 JobsEngine jobsEngine_;
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204
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205 #if ORTHANC_ENABLE_PLUGINS == 1
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206 OrthancPlugins* plugins_;
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207 #endif
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208
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209 ServerListeners listeners_;
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210 boost::shared_mutex listenersMutex_;
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211
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212 bool done_;
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213 bool haveJobsChanged_;
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214 bool isJobsEngineUnserialized_;
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215 SharedMessageQueue pendingChanges_;
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216 boost::thread changeThread_;
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217 boost::thread saveJobsThread_;
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218
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219 std::unique_ptr<SharedArchive> queryRetrieveArchive_;
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220 std::string defaultLocalAet_;
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221 OrthancHttpHandler httpHandler_;
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222 bool saveJobs_;
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223 FindStorageAccessMode findStorageAccessMode_;
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224 unsigned int limitFindInstances_;
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225 unsigned int limitFindResults_;
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226
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227 std::unique_ptr<MetricsRegistry> metricsRegistry_;
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228 bool isHttpServerSecure_;
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229 bool isExecuteLuaEnabled_;
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230 bool overwriteInstances_;
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231
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232 std::unique_ptr<StorageCommitmentReports> storageCommitmentReports_;
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233
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234 bool transcodeDicomProtocol_;
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235 std::unique_ptr<IDicomTranscoder> dcmtkTranscoder_;
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236 BuiltinDecoderTranscoderOrder builtinDecoderTranscoderOrder_;
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237 bool isIngestTranscoding_;
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238 DicomTransferSyntax ingestTransferSyntax_;
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239
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240 StoreStatus StoreAfterTranscoding(std::string& resultPublicId,
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241 DicomInstanceToStore& dicom,
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242 StoreInstanceMode mode);
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243
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244 void ApplyInternal(ILookupVisitor& visitor,
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245 const DatabaseLookup& lookup,
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246 ResourceType queryLevel,
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247 size_t since,
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248 size_t limit);
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249
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250 // This DicomModification object is intended to be used as a "rules engine"
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251 // when de-identifying logs for C-Find, C-Get, and C-Move queries
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252 DicomModification logsDeidentifierRules_;
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253 bool deidentifyDimseQueryLogs_;
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254 DicomVersion deidentifyDimseQueryLogsDicomVersion_;
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255
224
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256 public:
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257 class DicomCacheLocker : public boost::noncopyable
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258 {
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259 private:
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260 ServerContext& that_;
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261 ParsedDicomFile *dicom_;
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parents: 1126
diff changeset
262 boost::mutex::scoped_lock lock_;
778
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diff changeset
263
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diff changeset
264 public:
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diff changeset
265 DicomCacheLocker(ServerContext& that,
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266 const std::string& instancePublicId);
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diff changeset
267
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diff changeset
268 ~DicomCacheLocker();
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diff changeset
269
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diff changeset
270 ParsedDicomFile& GetDicom()
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271 {
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272 return *dicom_;
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diff changeset
273 }
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diff changeset
274 };
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diff changeset
275
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diff changeset
276 ServerContext(IDatabaseWrapper& database,
2665
389d050a2e66 fix deadlock, speed up unit tests
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parents: 2626
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277 IStorageArea& area,
2950
dc18d5804746 support of JobsHistorySize set to zero
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parents: 2940
diff changeset
278 bool unitTesting,
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parents: 2940
diff changeset
279 size_t maxCompletedJobs);
1134
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parents: 1133
diff changeset
280
1436
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parents: 1434
diff changeset
281 ~ServerContext();
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282
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283 void SetupJobsEngine(bool unitTesting,
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284 bool loadJobsFromDatabase);
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285
224
4eb0c7ce86c9 refactoring for store
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parents:
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286 ServerIndex& GetIndex()
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parents:
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287 {
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288 return index_;
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parents:
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289 }
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parents:
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290
236
6d9be2b470b4 compression
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diff changeset
291 void SetCompressionEnabled(bool enabled);
6d9be2b470b4 compression
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parents: 234
diff changeset
292
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diff changeset
293 bool IsCompressionEnabled() const
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parents: 234
diff changeset
294 {
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parents: 234
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295 return compressionEnabled_;
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parents: 234
diff changeset
296 }
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parents: 234
diff changeset
297
1126
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298 void RemoveFile(const std::string& fileUuid,
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diff changeset
299 FileContentType type);
226
8a26a8e85edf refactoring to read files
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parents: 224
diff changeset
300
699
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parents: 697
diff changeset
301 bool AddAttachment(const std::string& resourceId,
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parents: 697
diff changeset
302 FileContentType attachmentType,
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parents: 697
diff changeset
303 const void* data,
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parents: 697
diff changeset
304 size_t size);
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parents: 697
diff changeset
305
1004
a226e0959d8b DicomInstanceToStore
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parents: 1003
diff changeset
306 StoreStatus Store(std::string& resultPublicId,
3814
023b2a9f3aa1 new enum: StoreInstanceMode
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parents: 3813
diff changeset
307 DicomInstanceToStore& dicom,
023b2a9f3aa1 new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3813
diff changeset
308 StoreInstanceMode mode);
1004
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parents: 1003
diff changeset
309
1146
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diff changeset
310 void AnswerAttachment(RestApiOutput& output,
1700
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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parents: 1632
diff changeset
311 const std::string& resourceId,
1146
200fcac0deb4 optimization for access to attachments
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parents: 1145
diff changeset
312 FileContentType content);
226
8a26a8e85edf refactoring to read files
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parents: 224
diff changeset
313
1700
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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parents: 1632
diff changeset
314 void ChangeAttachmentCompression(const std::string& resourceId,
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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parents: 1632
diff changeset
315 FileContentType attachmentType,
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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parents: 1632
diff changeset
316 CompressionType compression);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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parents: 1632
diff changeset
317
2127
bfa92c9328d7 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2124
diff changeset
318 void ReadDicomAsJson(std::string& result,
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
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parents: 2382
diff changeset
319 const std::string& instancePublicId,
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parents: 2382
diff changeset
320 const std::set<DicomTag>& ignoreTagLength);
2127
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parents: 2124
diff changeset
321
2124
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parents: 2122
diff changeset
322 void ReadDicomAsJson(Json::Value& result,
2409
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parents: 2382
diff changeset
323 const std::string& instancePublicId,
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parents: 2382
diff changeset
324 const std::set<DicomTag>& ignoreTagLength);
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parents: 2382
diff changeset
325
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parents: 2382
diff changeset
326 void ReadDicomAsJson(std::string& result,
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parents: 2382
diff changeset
327 const std::string& instancePublicId)
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
328 {
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parents: 2382
diff changeset
329 std::set<DicomTag> ignoreTagLength;
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parents: 2382
diff changeset
330 ReadDicomAsJson(result, instancePublicId, ignoreTagLength);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
331 }
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parents: 2382
diff changeset
332
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
333 void ReadDicomAsJson(Json::Value& result,
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
334 const std::string& instancePublicId)
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
335 {
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parents: 2382
diff changeset
336 std::set<DicomTag> ignoreTagLength;
e4045b3c9772 ignore-length argument if retrieving DICOM tags
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parents: 2382
diff changeset
337 ReadDicomAsJson(result, instancePublicId, ignoreTagLength);
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
338 }
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
339
2124
2b1520efa282 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2122
diff changeset
340 void ReadDicom(std::string& dicom,
2b1520efa282 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2122
diff changeset
341 const std::string& instancePublicId)
2b1520efa282 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2122
diff changeset
342 {
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
343 ReadAttachment(dicom, instancePublicId, FileContentType_Dicom, true);
2124
2b1520efa282 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2122
diff changeset
344 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2122
diff changeset
345
227
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
346 // TODO CACHING MECHANISM AT THIS POINT
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
347 void ReadAttachment(std::string& result,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
348 const std::string& instancePublicId,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
349 FileContentType content,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents: 2127
diff changeset
350 bool uncompressIfNeeded);
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
351
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
352 void ReadAttachment(std::string& result,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
353 const FileInfo& attachment);
1778
776573e592da create media refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1758
diff changeset
354
695
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
355 void SetStoreMD5ForAttachments(bool storeMD5);
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
356
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
357 bool IsStoreMD5ForAttachments() const
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
358 {
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1456
diff changeset
359 return storeMD5_;
695
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
360 }
771
537837f50fbb refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 699
diff changeset
361
2570
2e879c796ec7 JobsRegistry::SubmitAndWait(), StoreScuJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
362 JobsEngine& GetJobsEngine()
2e879c796ec7 JobsRegistry::SubmitAndWait(), StoreScuJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
363 {
2e879c796ec7 JobsRegistry::SubmitAndWait(), StoreScuJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
364 return jobsEngine_;
2e879c796ec7 JobsRegistry::SubmitAndWait(), StoreScuJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
365 }
2e879c796ec7 JobsRegistry::SubmitAndWait(), StoreScuJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
366
1145
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
367 bool DeleteResource(Json::Value& target,
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
368 const std::string& uuid,
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
369 ResourceType expectedType);
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1146
diff changeset
370
1198
1169528a9a5f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
371 void SignalChange(const ServerIndexChange& change);
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1223
diff changeset
372
1368
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
373 SharedArchive& GetQueryRetrieveArchive()
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
374 {
2940
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2876
diff changeset
375 return *queryRetrieveArchive_;
1368
b22ba8c5edbe query retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
376 }
1427
d710ea64f0fd Custom setting of the local AET during C-Store SCU (both in Lua and in the REST API)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
377
2965
9c0b0a6d8b54 MediaArchiveSize configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2950
diff changeset
378 SharedArchive& GetMediaArchive()
9c0b0a6d8b54 MediaArchiveSize configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2950
diff changeset
379 {
9c0b0a6d8b54 MediaArchiveSize configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2950
diff changeset
380 return *mediaArchive_;
9c0b0a6d8b54 MediaArchiveSize configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2950
diff changeset
381 }
9c0b0a6d8b54 MediaArchiveSize configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2950
diff changeset
382
1427
d710ea64f0fd Custom setting of the local AET during C-Store SCU (both in Lua and in the REST API)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
383 const std::string& GetDefaultLocalApplicationEntityTitle() const
d710ea64f0fd Custom setting of the local AET during C-Store SCU (both in Lua and in the REST API)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
384 {
d710ea64f0fd Custom setting of the local AET during C-Store SCU (both in Lua and in the REST API)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
385 return defaultLocalAet_;
d710ea64f0fd Custom setting of the local AET during C-Store SCU (both in Lua and in the REST API)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
386 }
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
387
2617
912a767911b0 back to a single Lua context
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2616
diff changeset
388 LuaScripting& GetLuaScripting()
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
389 {
2738
3a55b77339ff fix deadlock in Lua scripts
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2673
diff changeset
390 return mainLua_;
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
391 }
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
392
1444
b2b09a3dbd8e refactoring: OrthancHttpHandler inside OrthancServer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1436
diff changeset
393 OrthancHttpHandler& GetHttpHandler()
b2b09a3dbd8e refactoring: OrthancHttpHandler inside OrthancServer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1436
diff changeset
394 {
b2b09a3dbd8e refactoring: OrthancHttpHandler inside OrthancServer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1436
diff changeset
395 return httpHandler_;
b2b09a3dbd8e refactoring: OrthancHttpHandler inside OrthancServer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1436
diff changeset
396 }
b2b09a3dbd8e refactoring: OrthancHttpHandler inside OrthancServer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1436
diff changeset
397
1447
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1444
diff changeset
398 void Stop();
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1444
diff changeset
399
3021
2cbafb5d5a62 renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3015
diff changeset
400 void Apply(ILookupVisitor& visitor,
3033
5da6d1063d8f effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
401 const DatabaseLookup& lookup,
5da6d1063d8f effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3025
diff changeset
402 ResourceType queryLevel,
2304
563bf878407a Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
403 size_t since,
563bf878407a Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
404 size_t limit);
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1753
diff changeset
405
3015
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
406 bool LookupOrReconstructMetadata(std::string& target,
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
407 const std::string& publicId,
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
408 MetadataType type);
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
409
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
410
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
411 /**
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
412 * Management of the plugins
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
413 **/
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
414
2136
dd609a99d39a uniformization of the macro naming
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2128
diff changeset
415 #if ORTHANC_ENABLE_PLUGINS == 1
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
416 void SetPlugins(OrthancPlugins& plugins);
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
417
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
418 void ResetPlugins();
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
419
1632
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
420 const OrthancPlugins& GetPlugins() const;
1741
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1700
diff changeset
421
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1700
diff changeset
422 OrthancPlugins& GetPlugins();
1632
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
423 #endif
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
424
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
425 bool HasPlugins() const;
2626
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
426
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
427 void AddChildInstances(SetOfInstancesJob& job,
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
428 const std::string& publicId);
2940
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2876
diff changeset
429
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2876
diff changeset
430 void SignalUpdatedModalities();
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2876
diff changeset
431
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2876
diff changeset
432 void SignalUpdatedPeers();
3174
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3165
diff changeset
433
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3165
diff changeset
434 MetricsRegistry& GetMetricsRegistry()
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3165
diff changeset
435 {
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3165
diff changeset
436 return *metricsRegistry_;
8ea7c4546c3a primitives to collect metrics in Orthanc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3165
diff changeset
437 }
3533
2090ec6a83a5 create a default user if none is provided, while issuing a warning in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
438
3534
cac8ffcb9cef forcing AuthenticationEnabled to false is considered as insecure if remote access is allowed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3533
diff changeset
439 void SetHttpServerSecure(bool isSecure)
3533
2090ec6a83a5 create a default user if none is provided, while issuing a warning in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
440 {
3534
cac8ffcb9cef forcing AuthenticationEnabled to false is considered as insecure if remote access is allowed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3533
diff changeset
441 isHttpServerSecure_ = isSecure;
3533
2090ec6a83a5 create a default user if none is provided, while issuing a warning in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
442 }
2090ec6a83a5 create a default user if none is provided, while issuing a warning in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
443
3534
cac8ffcb9cef forcing AuthenticationEnabled to false is considered as insecure if remote access is allowed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3533
diff changeset
444 bool IsHttpServerSecure() const
3533
2090ec6a83a5 create a default user if none is provided, while issuing a warning in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
445 {
3534
cac8ffcb9cef forcing AuthenticationEnabled to false is considered as insecure if remote access is allowed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3533
diff changeset
446 return isHttpServerSecure_;
3533
2090ec6a83a5 create a default user if none is provided, while issuing a warning in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3174
diff changeset
447 }
3535
41365091a41e display a security warning in the logs at startup when ExecuteLuaEnabled is true
Alain Mazy <alain@mazy.be>
parents: 3534
diff changeset
448
41365091a41e display a security warning in the logs at startup when ExecuteLuaEnabled is true
Alain Mazy <alain@mazy.be>
parents: 3534
diff changeset
449 void SetExecuteLuaEnabled(bool enabled)
41365091a41e display a security warning in the logs at startup when ExecuteLuaEnabled is true
Alain Mazy <alain@mazy.be>
parents: 3534
diff changeset
450 {
41365091a41e display a security warning in the logs at startup when ExecuteLuaEnabled is true
Alain Mazy <alain@mazy.be>
parents: 3534
diff changeset
451 isExecuteLuaEnabled_ = enabled;
41365091a41e display a security warning in the logs at startup when ExecuteLuaEnabled is true
Alain Mazy <alain@mazy.be>
parents: 3534
diff changeset
452 }
41365091a41e display a security warning in the logs at startup when ExecuteLuaEnabled is true
Alain Mazy <alain@mazy.be>
parents: 3534
diff changeset
453
41365091a41e display a security warning in the logs at startup when ExecuteLuaEnabled is true
Alain Mazy <alain@mazy.be>
parents: 3534
diff changeset
454 bool IsExecuteLuaEnabled() const
41365091a41e display a security warning in the logs at startup when ExecuteLuaEnabled is true
Alain Mazy <alain@mazy.be>
parents: 3534
diff changeset
455 {
41365091a41e display a security warning in the logs at startup when ExecuteLuaEnabled is true
Alain Mazy <alain@mazy.be>
parents: 3534
diff changeset
456 return isExecuteLuaEnabled_;
41365091a41e display a security warning in the logs at startup when ExecuteLuaEnabled is true
Alain Mazy <alain@mazy.be>
parents: 3534
diff changeset
457 }
3660
f159b731c47d IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
458
3813
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3762
diff changeset
459 void SetOverwriteInstances(bool overwrite)
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3762
diff changeset
460 {
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3762
diff changeset
461 overwriteInstances_ = overwrite;
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3762
diff changeset
462 }
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3762
diff changeset
463
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3762
diff changeset
464 bool IsOverwriteInstances() const
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3762
diff changeset
465 {
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3762
diff changeset
466 return overwriteInstances_;
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3762
diff changeset
467 }
aaaa442bfe39 moving SetOverwriteInstances from ServerIndex to ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3762
diff changeset
468
3660
f159b731c47d IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
469 virtual IStorageCommitmentFactory::ILookupHandler*
f159b731c47d IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
470 CreateStorageCommitment(const std::string& jobId,
f159b731c47d IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
471 const std::string& transactionUid,
f159b731c47d IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
472 const std::vector<std::string>& sopClassUids,
3662
d8371b4302ff OrthancPluginRegisterStorageCommitmentScpCallback()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3660
diff changeset
473 const std::vector<std::string>& sopInstanceUids,
d8371b4302ff OrthancPluginRegisterStorageCommitmentScpCallback()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3660
diff changeset
474 const std::string& remoteAet,
d8371b4302ff OrthancPluginRegisterStorageCommitmentScpCallback()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3660
diff changeset
475 const std::string& calledAet) ORTHANC_OVERRIDE;
3736
0540b54324f1 StorageCommitmentReports
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
476
0540b54324f1 StorageCommitmentReports
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
477 StorageCommitmentReports& GetStorageCommitmentReports()
0540b54324f1 StorageCommitmentReports
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
478 {
0540b54324f1 StorageCommitmentReports
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
479 return *storageCommitmentReports_;
0540b54324f1 StorageCommitmentReports
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
480 }
3894
8f7ad4989fec transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
481
3928
4cdc875510d1 ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3916
diff changeset
482 ImageAccessor* DecodeDicomFrame(const std::string& publicId,
4cdc875510d1 ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3916
diff changeset
483 unsigned int frameIndex);
4cdc875510d1 ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3916
diff changeset
484
4cdc875510d1 ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3916
diff changeset
485 ImageAccessor* DecodeDicomFrame(const DicomInstanceToStore& dicom,
4cdc875510d1 ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3916
diff changeset
486 unsigned int frameIndex);
4cdc875510d1 ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3916
diff changeset
487
3980
e42f5445d20d Fix decoding of DICOM images for plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3959
diff changeset
488 ImageAccessor* DecodeDicomFrame(const void* dicom,
e42f5445d20d Fix decoding of DICOM images for plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3959
diff changeset
489 size_t size,
e42f5445d20d Fix decoding of DICOM images for plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3959
diff changeset
490 unsigned int frameIndex);
e42f5445d20d Fix decoding of DICOM images for plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3959
diff changeset
491
3894
8f7ad4989fec transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
492 void StoreWithTranscoding(std::string& sopClassUid,
8f7ad4989fec transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
493 std::string& sopInstanceUid,
8f7ad4989fec transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
494 DicomStoreUserConnection& connection,
8f7ad4989fec transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
495 const std::string& dicom,
8f7ad4989fec transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
496 bool hasMoveOriginator,
8f7ad4989fec transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
497 const std::string& moveOriginatorAet,
8f7ad4989fec transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
498 uint16_t moveOriginatorId);
8f7ad4989fec transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
499
3930
b99acc213937 transcoder plugins and GDCM transcoding are working
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3928
diff changeset
500 // This method can be used even if the global option
3911
0ef7f4528be2 renamed option TranscodingEnabled to TranscodeDicomProtocol
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3910
diff changeset
501 // "TranscodeDicomProtocol" is set to "false"
3944
aae045f802f4 preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3939
diff changeset
502 virtual bool Transcode(DicomImage& target,
aae045f802f4 preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3939
diff changeset
503 DicomImage& source /* in, "GetParsed()" possibly modified */,
aae045f802f4 preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3939
diff changeset
504 const std::set<DicomTransferSyntax>& allowedSyntaxes,
aae045f802f4 preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3939
diff changeset
505 bool allowNewSopInstanceUid) ORTHANC_OVERRIDE;
3959
76a24be12912 c-get: support of transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3951
diff changeset
506
76a24be12912 c-get: support of transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3951
diff changeset
507 bool IsTranscodeDicomProtocol() const
76a24be12912 c-get: support of transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3951
diff changeset
508 {
76a24be12912 c-get: support of transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3951
diff changeset
509 return transcodeDicomProtocol_;
76a24be12912 c-get: support of transcoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3951
diff changeset
510 }
4375
208029732d51 New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents: 4205
diff changeset
511
208029732d51 New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents: 4205
diff changeset
512 const std::string& GetDeidentifiedQueryContent(const DicomElement& element) const;
224
4eb0c7ce86c9 refactoring for store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
513 };
4eb0c7ce86c9 refactoring for store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
514 }