Mercurial > hg > orthanc
annotate OrthancServer/Sources/ServerIndex.cpp @ 4569:19ea4ecd6d9a db-changes
cppcheck
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Mon, 08 Mar 2021 15:13:25 +0100 |
parents | a3e6aa2b07b0 |
children | 648defffc8cc |
rev | line source |
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0 | 1 /** |
62 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
0 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
8 * modify it under the terms of the GNU General Public License as | |
9 * published by the Free Software Foundation, either version 3 of the | |
10 * License, or (at your option) any later version. | |
136 | 11 * |
12 * In addition, as a special exception, the copyright holders of this | |
13 * program give permission to link the code of its release with the | |
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
15 * that use the same license as the "OpenSSL" library), and distribute | |
16 * the linked executables. You must obey the GNU General Public License | |
17 * in all respects for all of the code used other than "OpenSSL". If you | |
18 * modify file(s) with this exception, you may extend this exception to | |
19 * your version of the file(s), but you are not obligated to do so. If | |
20 * you do not wish to do so, delete this exception statement from your | |
21 * version. If you delete this exception statement from all source files | |
22 * in the program, then also delete it here. | |
0 | 23 * |
24 * This program is distributed in the hope that it will be useful, but | |
25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
27 * General Public License for more details. | |
28 * | |
29 * You should have received a copy of the GNU General Public License | |
30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
31 **/ | |
32 | |
33 | |
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34 #include "PrecompiledHeadersServer.h" |
0 | 35 #include "ServerIndex.h" |
36 | |
6 | 37 #ifndef NOMINMAX |
2 | 38 #define NOMINMAX |
6 | 39 #endif |
40 | |
4045 | 41 #include "../../OrthancFramework/Sources/DicomFormat/DicomArray.h" |
42 #include "../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" | |
43 #include "../../OrthancFramework/Sources/DicomParsing/ParsedDicomFile.h" | |
44 #include "../../OrthancFramework/Sources/Logging.h" | |
45 #include "../../OrthancFramework/Sources/Toolbox.h" | |
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46 |
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47 #include "Database/ResourcesContent.h" |
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48 #include "OrthancConfiguration.h" |
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49 #include "Search/DatabaseLookup.h" |
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50 #include "Search/DicomTagConstraint.h" |
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51 #include "ServerContext.h" |
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52 #include "ServerIndexChange.h" |
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53 #include "ServerToolbox.h" |
0 | 54 |
55 #include <boost/lexical_cast.hpp> | |
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56 #include <boost/tuple/tuple.hpp> |
0 | 57 #include <stdio.h> |
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58 #include <stack> |
0 | 59 |
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60 static const uint64_t MEGA_BYTES = 1024 * 1024; |
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61 |
62 | 62 namespace Orthanc |
0 | 63 { |
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64 static void CopyListToVector(std::vector<std::string>& target, |
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65 const std::list<std::string>& source) |
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66 { |
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67 target.resize(source.size()); |
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68 |
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69 size_t pos = 0; |
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70 |
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71 for (std::list<std::string>::const_iterator |
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72 it = source.begin(); it != source.end(); ++it) |
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73 { |
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74 target[pos] = *it; |
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75 pos ++; |
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76 } |
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77 } |
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78 |
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79 |
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80 class ServerIndex::Listener : public IDatabaseListener |
0 | 81 { |
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82 private: |
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83 struct FileToRemove |
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84 { |
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85 private: |
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86 std::string uuid_; |
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87 FileContentType type_; |
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88 |
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89 public: |
4205 | 90 explicit FileToRemove(const FileInfo& info) : |
91 uuid_(info.GetUuid()), | |
92 type_(info.GetContentType()) | |
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93 { |
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94 } |
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95 |
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96 const std::string& GetUuid() const |
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97 { |
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98 return uuid_; |
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99 } |
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100 |
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101 FileContentType GetContentType() const |
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102 { |
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103 return type_; |
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104 } |
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105 }; |
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106 |
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107 ServerContext& context_; |
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108 bool hasRemainingLevel_; |
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109 ResourceType remainingType_; |
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110 std::string remainingPublicId_; |
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111 std::list<FileToRemove> pendingFilesToRemove_; |
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112 std::list<ServerIndexChange> pendingChanges_; |
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113 uint64_t sizeOfFilesToRemove_; |
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114 bool insideTransaction_; |
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115 |
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116 void Reset() |
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117 { |
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118 sizeOfFilesToRemove_ = 0; |
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119 hasRemainingLevel_ = false; |
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120 pendingFilesToRemove_.clear(); |
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121 pendingChanges_.clear(); |
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122 } |
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123 |
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124 public: |
4205 | 125 explicit Listener(ServerContext& context) : |
126 context_(context), | |
127 insideTransaction_(false) | |
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128 { |
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129 Reset(); |
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130 assert(ResourceType_Patient < ResourceType_Study && |
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131 ResourceType_Study < ResourceType_Series && |
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132 ResourceType_Series < ResourceType_Instance); |
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133 } |
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134 |
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135 void StartTransaction() |
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136 { |
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137 Reset(); |
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138 insideTransaction_ = true; |
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139 } |
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140 |
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141 void EndTransaction() |
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142 { |
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143 insideTransaction_ = false; |
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144 } |
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145 |
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146 uint64_t GetSizeOfFilesToRemove() |
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147 { |
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148 return sizeOfFilesToRemove_; |
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149 } |
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150 |
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151 void CommitFilesToRemove() |
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152 { |
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153 for (std::list<FileToRemove>::const_iterator |
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154 it = pendingFilesToRemove_.begin(); |
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155 it != pendingFilesToRemove_.end(); ++it) |
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156 { |
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157 try |
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158 { |
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159 context_.RemoveFile(it->GetUuid(), it->GetContentType()); |
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160 } |
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161 catch (OrthancException& e) |
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162 { |
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163 LOG(ERROR) << "Unable to remove an attachment from the storage area: " |
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164 << it->GetUuid() << " (type: " << EnumerationToString(it->GetContentType()) << ")"; |
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165 } |
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166 } |
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167 } |
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168 |
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169 void CommitChanges() |
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170 { |
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171 for (std::list<ServerIndexChange>::const_iterator |
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172 it = pendingChanges_.begin(); |
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173 it != pendingChanges_.end(); ++it) |
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174 { |
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175 context_.SignalChange(*it); |
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176 } |
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177 } |
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178 |
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179 virtual void SignalRemainingAncestor(ResourceType parentType, |
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180 const std::string& publicId) |
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181 { |
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182 LOG(TRACE) << "Remaining ancestor \"" << publicId << "\" (" << parentType << ")"; |
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183 |
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184 if (hasRemainingLevel_) |
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185 { |
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186 if (parentType < remainingType_) |
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187 { |
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188 remainingType_ = parentType; |
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189 remainingPublicId_ = publicId; |
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190 } |
1158 | 191 } |
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192 else |
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193 { |
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194 hasRemainingLevel_ = true; |
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195 remainingType_ = parentType; |
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196 remainingPublicId_ = publicId; |
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197 } |
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198 } |
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199 |
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200 virtual void SignalFileDeleted(const FileInfo& info) |
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201 { |
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202 assert(Toolbox::IsUuid(info.GetUuid())); |
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203 pendingFilesToRemove_.push_back(FileToRemove(info)); |
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204 sizeOfFilesToRemove_ += info.GetCompressedSize(); |
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205 } |
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206 |
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207 virtual void SignalChange(const ServerIndexChange& change) |
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208 { |
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209 LOG(TRACE) << "Change related to resource " << change.GetPublicId() << " of type " |
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210 << EnumerationToString(change.GetResourceType()) << ": " |
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211 << EnumerationToString(change.GetChangeType()); |
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212 |
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213 if (insideTransaction_) |
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214 { |
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215 pendingChanges_.push_back(change); |
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216 } |
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217 else |
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218 { |
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219 context_.SignalChange(change); |
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220 } |
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221 } |
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222 |
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223 bool HasRemainingLevel() const |
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224 { |
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225 return hasRemainingLevel_; |
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226 } |
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227 |
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228 ResourceType GetRemainingType() const |
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229 { |
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230 assert(HasRemainingLevel()); |
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231 return remainingType_; |
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232 } |
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233 |
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234 const std::string& GetRemainingPublicId() const |
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235 { |
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236 assert(HasRemainingLevel()); |
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237 return remainingPublicId_; |
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238 } |
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239 }; |
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241 | |
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242 class ServerIndex::Transaction |
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243 { |
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244 private: |
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245 ServerIndex& index_; |
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246 std::unique_ptr<IDatabaseWrapper::ITransaction> transaction_; |
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247 bool isCommitted_; |
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249 public: |
4205 | 250 explicit Transaction(ServerIndex& index) : |
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251 index_(index), |
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252 isCommitted_(false) |
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253 { |
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255 index_.listener_->StartTransaction(); |
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256 } |
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257 |
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258 ~Transaction() |
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259 { |
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260 index_.listener_->EndTransaction(); |
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261 |
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262 if (!isCommitted_) |
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263 { |
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264 transaction_->Rollback(); |
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265 } |
278
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266 } |
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267 |
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268 void Commit(uint64_t sizeOfAddedFiles) |
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269 { |
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270 if (!isCommitted_) |
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271 { |
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272 int64_t delta = (static_cast<int64_t>(sizeOfAddedFiles) - |
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273 static_cast<int64_t>(index_.listener_->GetSizeOfFilesToRemove())); |
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274 |
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275 transaction_->Commit(delta); |
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276 |
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277 // We can remove the files once the SQLite transaction has |
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278 // been successfully committed. Some files might have to be |
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279 // deleted because of recycling. |
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280 index_.listener_->CommitFilesToRemove(); |
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281 |
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282 // Send all the pending changes to the Orthanc plugins |
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283 index_.listener_->CommitChanges(); |
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284 |
278
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285 isCommitted_ = true; |
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286 } |
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287 } |
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288 }; |
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289 |
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290 |
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291 class ServerIndex::UnstableResourcePayload |
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292 { |
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293 private: |
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294 ResourceType type_; |
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295 std::string publicId_; |
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296 boost::posix_time::ptime time_; |
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297 |
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298 public: |
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299 UnstableResourcePayload() : type_(ResourceType_Instance) |
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300 { |
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301 } |
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302 |
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303 UnstableResourcePayload(Orthanc::ResourceType type, |
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304 const std::string& publicId) : |
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305 type_(type), |
4205 | 306 publicId_(publicId), |
307 time_(boost::posix_time::second_clock::local_time()) | |
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308 { |
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309 } |
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310 |
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311 unsigned int GetAge() const |
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312 { |
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313 return (boost::posix_time::second_clock::local_time() - time_).total_seconds(); |
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314 } |
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315 |
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316 ResourceType GetResourceType() const |
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317 { |
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318 return type_; |
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319 } |
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320 |
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321 const std::string& GetPublicId() const |
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322 { |
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323 return publicId_; |
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324 } |
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325 }; |
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326 |
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327 |
3027 | 328 class ServerIndex::MainDicomTagsRegistry : public boost::noncopyable |
329 { | |
330 private: | |
331 class TagInfo | |
332 { | |
333 private: | |
334 ResourceType level_; | |
335 DicomTagType type_; | |
336 | |
337 public: | |
338 TagInfo() | |
339 { | |
340 } | |
341 | |
342 TagInfo(ResourceType level, | |
343 DicomTagType type) : | |
344 level_(level), | |
345 type_(type) | |
346 { | |
347 } | |
348 | |
349 ResourceType GetLevel() const | |
350 { | |
351 return level_; | |
352 } | |
353 | |
354 DicomTagType GetType() const | |
355 { | |
356 return type_; | |
357 } | |
358 }; | |
359 | |
360 typedef std::map<DicomTag, TagInfo> Registry; | |
361 | |
362 | |
363 Registry registry_; | |
364 | |
365 void LoadTags(ResourceType level) | |
366 { | |
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367 { |
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368 const DicomTag* tags = NULL; |
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369 size_t size; |
3027 | 370 |
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371 ServerToolbox::LoadIdentifiers(tags, size, level); |
3027 | 372 |
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373 for (size_t i = 0; i < size; i++) |
3027 | 374 { |
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375 if (registry_.find(tags[i]) == registry_.end()) |
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376 { |
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377 registry_[tags[i]] = TagInfo(level, DicomTagType_Identifier); |
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378 } |
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379 else |
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380 { |
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381 // These patient-level tags are copied in the study level |
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382 assert(level == ResourceType_Study && |
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383 (tags[i] == DICOM_TAG_PATIENT_ID || |
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384 tags[i] == DICOM_TAG_PATIENT_NAME || |
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385 tags[i] == DICOM_TAG_PATIENT_BIRTH_DATE)); |
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386 } |
3027 | 387 } |
388 } | |
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389 |
3027 | 390 { |
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391 std::set<DicomTag> tags; |
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392 DicomMap::GetMainDicomTags(tags, level); |
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393 |
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394 for (std::set<DicomTag>::const_iterator |
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395 tag = tags.begin(); tag != tags.end(); ++tag) |
3027 | 396 { |
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397 if (registry_.find(*tag) == registry_.end()) |
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398 { |
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399 registry_[*tag] = TagInfo(level, DicomTagType_Main); |
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400 } |
3027 | 401 } |
402 } | |
403 } | |
404 | |
405 public: | |
406 MainDicomTagsRegistry() | |
407 { | |
408 LoadTags(ResourceType_Patient); | |
409 LoadTags(ResourceType_Study); | |
410 LoadTags(ResourceType_Series); | |
411 LoadTags(ResourceType_Instance); | |
412 } | |
413 | |
414 void LookupTag(ResourceType& level, | |
415 DicomTagType& type, | |
416 const DicomTag& tag) const | |
417 { | |
418 Registry::const_iterator it = registry_.find(tag); | |
419 | |
420 if (it == registry_.end()) | |
421 { | |
422 // Default values | |
423 level = ResourceType_Instance; | |
424 type = DicomTagType_Generic; | |
425 } | |
426 else | |
427 { | |
428 level = it->second.GetLevel(); | |
429 type = it->second.GetType(); | |
430 } | |
431 } | |
432 }; | |
433 | |
434 | |
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435 void ServerIndex::FlushThread(ServerIndex* that, |
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436 unsigned int threadSleep) |
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437 { |
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438 // By default, wait for 10 seconds before flushing |
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439 unsigned int sleep = 10; |
511
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440 |
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441 try |
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442 { |
744 | 443 boost::mutex::scoped_lock lock(that->mutex_); |
1239 | 444 std::string sleepString; |
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445 |
1247 | 446 if (that->db_.LookupGlobalProperty(sleepString, GlobalProperty_FlushSleep) && |
1239 | 447 Toolbox::IsInteger(sleepString)) |
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448 { |
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449 sleep = boost::lexical_cast<unsigned int>(sleepString); |
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450 } |
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451 } |
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452 catch (boost::bad_lexical_cast&) |
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453 { |
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454 } |
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455 |
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456 LOG(INFO) << "Starting the database flushing thread (sleep = " << sleep << ")"; |
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457 |
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458 unsigned int count = 0; |
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459 |
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460 while (!that->done_) |
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461 { |
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462 boost::this_thread::sleep(boost::posix_time::milliseconds(threadSleep)); |
511
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463 count++; |
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464 if (count < sleep) |
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465 { |
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466 continue; |
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467 } |
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468 |
2217 | 469 Logging::Flush(); |
470 | |
511
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471 boost::mutex::scoped_lock lock(that->mutex_); |
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472 |
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473 try |
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474 { |
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475 that->db_.FlushToDisk(); |
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476 } |
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477 catch (OrthancException&) |
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478 { |
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479 LOG(ERROR) << "Cannot flush the SQLite database to the disk (is your filesystem full?)"; |
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480 } |
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481 |
511
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482 count = 0; |
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483 } |
511
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484 |
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485 LOG(INFO) << "Stopping the database flushing thread"; |
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486 } |
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487 |
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488 |
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489 static bool ComputeExpectedNumberOfInstances(int64_t& target, |
433 | 490 const DicomMap& dicomSummary) |
491 { | |
492 try | |
493 { | |
656 | 494 const DicomValue* value; |
495 const DicomValue* value2; | |
496 | |
433 | 497 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGES_IN_ACQUISITION)) != NULL && |
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498 !value->IsNull() && |
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499 !value->IsBinary() && |
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500 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS)) != NULL && |
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501 !value2->IsNull() && |
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502 !value2->IsBinary()) |
433 | 503 { |
504 // Patch for series with temporal positions thanks to Will Ryder | |
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505 int64_t imagesInAcquisition = boost::lexical_cast<int64_t>(value->GetContent()); |
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506 int64_t countTemporalPositions = boost::lexical_cast<int64_t>(value2->GetContent()); |
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507 target = imagesInAcquisition * countTemporalPositions; |
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508 return (target > 0); |
433 | 509 } |
510 | |
511 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_SLICES)) != NULL && | |
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512 !value->IsNull() && |
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513 !value->IsBinary() && |
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514 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TIME_SLICES)) != NULL && |
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515 !value2->IsBinary() && |
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516 !value2->IsNull()) |
433 | 517 { |
518 // Support of Cardio-PET images | |
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519 int64_t numberOfSlices = boost::lexical_cast<int64_t>(value->GetContent()); |
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520 int64_t numberOfTimeSlices = boost::lexical_cast<int64_t>(value2->GetContent()); |
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521 target = numberOfSlices * numberOfTimeSlices; |
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522 return (target > 0); |
433 | 523 } |
524 | |
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525 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)) != NULL && |
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526 !value->IsNull() && |
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527 !value->IsBinary()) |
433 | 528 { |
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529 target = boost::lexical_cast<int64_t>(value->GetContent()); |
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530 return (target > 0); |
433 | 531 } |
532 } | |
1737
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533 catch (OrthancException&) |
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534 { |
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535 } |
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536 catch (boost::bad_lexical_cast&) |
433 | 537 { |
538 } | |
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539 |
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540 return false; |
433 | 541 } |
542 | |
543 | |
1237 | 544 |
545 | |
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546 static bool LookupStringMetadata(std::string& result, |
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547 const std::map<MetadataType, std::string>& metadata, |
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548 MetadataType type) |
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549 { |
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550 std::map<MetadataType, std::string>::const_iterator found = metadata.find(type); |
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551 |
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552 if (found == metadata.end()) |
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553 { |
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554 return false; |
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555 } |
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556 else |
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557 { |
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558 result = found->second; |
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559 return true; |
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560 } |
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561 } |
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562 |
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563 |
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564 static bool LookupIntegerMetadata(int64_t& result, |
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565 const std::map<MetadataType, std::string>& metadata, |
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566 MetadataType type) |
1237 | 567 { |
1238 | 568 std::string s; |
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569 if (!LookupStringMetadata(s, metadata, type)) |
1237 | 570 { |
571 return false; | |
572 } | |
573 | |
574 try | |
575 { | |
1238 | 576 result = boost::lexical_cast<int64_t>(s); |
1237 | 577 return true; |
578 } | |
579 catch (boost::bad_lexical_cast&) | |
580 { | |
581 return false; | |
582 } | |
583 } | |
584 | |
585 | |
1297 | 586 void ServerIndex::LogChange(int64_t internalId, |
587 ChangeType changeType, | |
588 ResourceType resourceType, | |
589 const std::string& publicId) | |
590 { | |
591 ServerIndexChange change(changeType, resourceType, publicId); | |
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592 |
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593 if (changeType <= ChangeType_INTERNAL_LastLogged) |
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594 { |
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595 db_.LogChange(internalId, change); |
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596 } |
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597 |
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598 assert(listener_.get() != NULL); |
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599 listener_->SignalChange(change); |
1297 | 600 } |
601 | |
1237 | 602 |
4554 | 603 bool ServerIndex::IsUnstableResource(int64_t id) |
604 { | |
605 return unstableResources_.Contains(id); | |
606 } | |
607 | |
1237 | 608 |
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609 ServerIndex::ServerIndex(ServerContext& context, |
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610 IDatabaseWrapper& db, |
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611 unsigned int threadSleep) : |
511
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612 done_(false), |
1247 | 613 db_(db), |
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614 maximumStorageSize_(0), |
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615 maximumPatients_(0), |
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616 mainDicomTagsRegistry_(new MainDicomTagsRegistry), |
4554 | 617 maxRetries_(10) |
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618 { |
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619 listener_.reset(new Listener(context)); |
1247 | 620 db_.SetListener(*listener_); |
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621 |
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622 // Initial recycling if the parameters have changed since the last |
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623 // execution of Orthanc |
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624 StandaloneRecycling(); |
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625 |
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626 if (db.HasFlushToDisk()) |
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627 { |
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628 flushThread_ = boost::thread(FlushThread, this, threadSleep); |
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629 } |
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630 |
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631 unstableResourcesMonitorThread_ = boost::thread |
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632 (UnstableResourcesMonitorThread, this, threadSleep); |
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633 } |
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634 |
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635 |
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636 |
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637 ServerIndex::~ServerIndex() |
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638 { |
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639 if (!done_) |
511
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640 { |
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641 LOG(ERROR) << "INTERNAL ERROR: ServerIndex::Stop() should be invoked manually to avoid mess in the destruction order!"; |
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642 Stop(); |
511
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643 } |
0 | 644 } |
645 | |
646 | |
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647 |
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648 void ServerIndex::Stop() |
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649 { |
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650 if (!done_) |
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651 { |
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652 done_ = true; |
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653 |
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654 if (db_.HasFlushToDisk() && |
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655 flushThread_.joinable()) |
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656 { |
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657 flushThread_.join(); |
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658 } |
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659 |
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660 if (unstableResourcesMonitorThread_.joinable()) |
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661 { |
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662 unstableResourcesMonitorThread_.join(); |
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663 } |
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664 } |
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665 } |
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666 |
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667 |
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668 static void SetInstanceMetadata(ResourcesContent& content, |
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669 std::map<MetadataType, std::string>& instanceMetadata, |
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670 int64_t instance, |
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671 MetadataType metadata, |
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672 const std::string& value) |
2188 | 673 { |
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674 content.AddMetadata(instance, metadata, value); |
2188 | 675 instanceMetadata[metadata] = value; |
676 } | |
677 | |
678 | |
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679 void ServerIndex::SignalNewResource(ChangeType changeType, |
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680 ResourceType level, |
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681 const std::string& publicId, |
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682 int64_t internalId) |
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683 { |
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684 ServerIndexChange change(changeType, level, publicId); |
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685 db_.LogChange(internalId, change); |
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686 |
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687 assert(listener_.get() != NULL); |
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688 listener_->SignalChange(change); |
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689 } |
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690 |
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691 |
1006
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692 StoreStatus ServerIndex::Store(std::map<MetadataType, std::string>& instanceMetadata, |
4505
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|
693 const DicomMap& dicomSummary, |
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694 const Attachments& attachments, |
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695 const MetadataMap& metadata, |
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696 const DicomInstanceOrigin& origin, |
4499 | 697 bool overwrite, |
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698 bool hasTransferSyntax, |
4507
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699 DicomTransferSyntax transferSyntax, |
4499 | 700 bool hasPixelDataOffset, |
701 uint64_t pixelDataOffset) | |
0 | 702 { |
206
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flush to disk thread
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703 boost::mutex::scoped_lock lock(mutex_); |
0 | 704 |
3090
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705 int64_t expectedInstances; |
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706 const bool hasExpectedInstances = |
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707 ComputeExpectedNumberOfInstances(expectedInstances, dicomSummary); |
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|
708 |
1006
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|
709 instanceMetadata.clear(); |
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|
710 |
4506
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711 DicomInstanceHasher hasher(dicomSummary); |
4505
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diff
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712 const std::string hashPatient = hasher.HashPatient(); |
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713 const std::string hashStudy = hasher.HashStudy(); |
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|
714 const std::string hashSeries = hasher.HashSeries(); |
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|
715 const std::string hashInstance = hasher.HashInstance(); |
3080
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716 |
0 | 717 try |
718 { | |
278
771f12042be9
more efficient determination of storage size for recycling
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diff
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|
719 Transaction t(*this); |
0 | 720 |
3080
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started refactoring of ServerIndex::Store()
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|
721 IDatabaseWrapper::CreateInstanceResult status; |
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|
722 int64_t instanceId; |
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|
723 |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
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2726
diff
changeset
|
724 // Check whether this instance is already stored |
3080
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started refactoring of ServerIndex::Store()
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|
725 if (!db_.CreateInstance(status, instanceId, hashPatient, |
3082
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new extension for database plugin SDK: createInstance
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|
726 hashStudy, hashSeries, hashInstance)) |
0 | 727 { |
3082
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|
728 // The instance already exists |
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|
729 |
3813
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
730 if (overwrite) |
3082
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|
731 { |
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732 // Overwrite the old instance |
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|
733 LOG(INFO) << "Overwriting instance: " << hashInstance; |
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734 db_.DeleteResource(instanceId); |
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|
735 |
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|
736 // Re-create the instance, now that the old one is removed |
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737 if (!db_.CreateInstance(status, instanceId, hashPatient, |
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|
738 hashStudy, hashSeries, hashInstance)) |
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739 { |
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|
740 throw OrthancException(ErrorCode_InternalError); |
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|
741 } |
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742 } |
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743 else |
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744 { |
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|
745 // Do nothing if the instance already exists and overwriting is disabled |
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|
746 db_.GetAllMetadata(instanceMetadata, instanceId); |
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747 return StoreStatus_AlreadyStored; |
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|
748 } |
3080
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|
749 } |
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diff
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|
750 |
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started refactoring of ServerIndex::Store()
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|
751 |
3090
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|
752 // Warn about the creation of new resources. The order must be |
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
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|
753 // from instance to patient. |
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starting optimization of SeriesIndex::GetSeriesStatus()
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diff
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|
754 |
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changeset
|
755 // NB: In theory, could be sped up by grouping the underlying |
31244604f617
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diff
changeset
|
756 // calls to "db_.LogChange()". However, this would only have an |
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diff
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|
757 // impact when new patient/study/series get created, which |
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
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diff
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|
758 // occurs far less often that creating new instances. The |
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starting optimization of SeriesIndex::GetSeriesStatus()
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diff
changeset
|
759 // positive impact looks marginal in practice. |
3080
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changeset
|
760 SignalNewResource(ChangeType_NewInstance, ResourceType_Instance, hashInstance, instanceId); |
1a75595d8e44
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|
761 |
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started refactoring of ServerIndex::Store()
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|
762 if (status.isNewSeries_) |
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|
763 { |
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|
764 SignalNewResource(ChangeType_NewSeries, ResourceType_Series, hashSeries, status.seriesId_); |
0 | 765 } |
3080
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changeset
|
766 |
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started refactoring of ServerIndex::Store()
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|
767 if (status.isNewStudy_) |
1a75595d8e44
started refactoring of ServerIndex::Store()
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parents:
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diff
changeset
|
768 { |
1a75595d8e44
started refactoring of ServerIndex::Store()
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parents:
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diff
changeset
|
769 SignalNewResource(ChangeType_NewStudy, ResourceType_Study, hashStudy, status.studyId_); |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
770 } |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
771 |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
772 if (status.isNewPatient_) |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
773 { |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
774 SignalNewResource(ChangeType_NewPatient, ResourceType_Patient, hashPatient, status.patientId_); |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
775 } |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
776 |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
777 |
268
4bc02e2254ec
preparing ServerIndex for recycling
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parents:
264
diff
changeset
|
778 // Ensure there is enough room in the storage for the new instance |
4bc02e2254ec
preparing ServerIndex for recycling
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parents:
264
diff
changeset
|
779 uint64_t instanceSize = 0; |
4bc02e2254ec
preparing ServerIndex for recycling
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parents:
264
diff
changeset
|
780 for (Attachments::const_iterator it = attachments.begin(); |
656 | 781 it != attachments.end(); ++it) |
268
4bc02e2254ec
preparing ServerIndex for recycling
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parents:
264
diff
changeset
|
782 { |
4bc02e2254ec
preparing ServerIndex for recycling
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parents:
264
diff
changeset
|
783 instanceSize += it->GetCompressedSize(); |
4bc02e2254ec
preparing ServerIndex for recycling
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parents:
264
diff
changeset
|
784 } |
4bc02e2254ec
preparing ServerIndex for recycling
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parents:
264
diff
changeset
|
785 |
3080
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
786 Recycle(instanceSize, hashPatient /* don't consider the current patient for recycling */); |
3086
74e3e48aa9bd
grouping the setting of metadata
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diff
changeset
|
787 |
74e3e48aa9bd
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diff
changeset
|
788 |
74e3e48aa9bd
grouping the setting of metadata
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parents:
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diff
changeset
|
789 // Attach the files to the newly created instance |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
790 for (Attachments::const_iterator it = attachments.begin(); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
791 it != attachments.end(); ++it) |
74e3e48aa9bd
grouping the setting of metadata
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parents:
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diff
changeset
|
792 { |
74e3e48aa9bd
grouping the setting of metadata
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parents:
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diff
changeset
|
793 db_.AddAttachment(instanceId, *it); |
74e3e48aa9bd
grouping the setting of metadata
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parents:
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diff
changeset
|
794 } |
3080
1a75595d8e44
started refactoring of ServerIndex::Store()
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parents:
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diff
changeset
|
795 |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
796 |
0 | 797 { |
3083
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
798 ResourcesContent content; |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
799 |
3086
74e3e48aa9bd
grouping the setting of metadata
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parents:
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diff
changeset
|
800 // Populate the tags of the newly-created resources |
74e3e48aa9bd
grouping the setting of metadata
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parents:
3083
diff
changeset
|
801 |
3083
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
802 content.AddResource(instanceId, ResourceType_Instance, dicomSummary); |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
803 |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
804 if (status.isNewSeries_) |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
805 { |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
806 content.AddResource(status.seriesId_, ResourceType_Series, dicomSummary); |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
807 } |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
808 |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
809 if (status.isNewStudy_) |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
810 { |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
811 content.AddResource(status.studyId_, ResourceType_Study, dicomSummary); |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
812 } |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
813 |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
814 if (status.isNewPatient_) |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
815 { |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
816 content.AddResource(status.patientId_, ResourceType_Patient, dicomSummary); |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
817 } |
683d572424b6
IDatabaseWrapper::SetResourcesContent
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3082
diff
changeset
|
818 |
3086
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diff
changeset
|
819 |
74e3e48aa9bd
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diff
changeset
|
820 // Attach the user-specified metadata |
74e3e48aa9bd
grouping the setting of metadata
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diff
changeset
|
821 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
822 for (MetadataMap::const_iterator |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
823 it = metadata.begin(); it != metadata.end(); ++it) |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
824 { |
74e3e48aa9bd
grouping the setting of metadata
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parents:
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diff
changeset
|
825 switch (it->first.first) |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
826 { |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
827 case ResourceType_Patient: |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
828 content.AddMetadata(status.patientId_, it->first.second, it->second); |
74e3e48aa9bd
grouping the setting of metadata
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parents:
3083
diff
changeset
|
829 break; |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
830 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
831 case ResourceType_Study: |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
832 content.AddMetadata(status.studyId_, it->first.second, it->second); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
833 break; |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
834 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
835 case ResourceType_Series: |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
836 content.AddMetadata(status.seriesId_, it->first.second, it->second); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
837 break; |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
838 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
839 case ResourceType_Instance: |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
840 SetInstanceMetadata(content, instanceMetadata, instanceId, |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
841 it->first.second, it->second); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
842 break; |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
843 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
844 default: |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
845 throw OrthancException(ErrorCode_ParameterOutOfRange); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
846 } |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
847 } |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
848 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
849 |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
850 // Attach the auto-computed metadata for the patient/study/series levels |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
851 std::string now = SystemToolbox::GetNowIsoString(true /* use UTC time (not local time) */); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
852 content.AddMetadata(status.seriesId_, MetadataType_LastUpdate, now); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
853 content.AddMetadata(status.studyId_, MetadataType_LastUpdate, now); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
854 content.AddMetadata(status.patientId_, MetadataType_LastUpdate, now); |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
855 |
4460
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
856 if (status.isNewSeries_) |
3090
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3087
diff
changeset
|
857 { |
4460
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
858 if (hasExpectedInstances) |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
859 { |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
860 content.AddMetadata(status.seriesId_, MetadataType_Series_ExpectedNumberOfInstances, |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
861 boost::lexical_cast<std::string>(expectedInstances)); |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
862 } |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
863 |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
864 // New in Orthanc 1.9.0 |
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
865 content.AddMetadata(status.seriesId_, MetadataType_RemoteAet, |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
866 origin.GetRemoteAetC()); |
3090
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3087
diff
changeset
|
867 } |
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3087
diff
changeset
|
868 |
31244604f617
starting optimization of SeriesIndex::GetSeriesStatus()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3087
diff
changeset
|
869 |
3086
74e3e48aa9bd
grouping the setting of metadata
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parents:
3083
diff
changeset
|
870 // Attach the auto-computed metadata for the instance level, |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
871 // reflecting these additions into the input metadata map |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
872 SetInstanceMetadata(content, instanceMetadata, instanceId, |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
873 MetadataType_Instance_ReceptionDate, now); |
4460
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
874 SetInstanceMetadata(content, instanceMetadata, instanceId, MetadataType_RemoteAet, |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
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parents:
4505
diff
changeset
|
875 origin.GetRemoteAetC()); |
3086
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grouping the setting of metadata
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parents:
3083
diff
changeset
|
876 SetInstanceMetadata(content, instanceMetadata, instanceId, MetadataType_Instance_Origin, |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
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parents:
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diff
changeset
|
877 EnumerationToString(origin.GetRequestOrigin())); |
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
878 |
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
879 |
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
880 if (hasTransferSyntax) |
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
881 { |
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
882 // New in Orthanc 1.2.0 |
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
883 SetInstanceMetadata(content, instanceMetadata, instanceId, |
4507
b4c58795f3a8
widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4506
diff
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|
884 MetadataType_Instance_TransferSyntax, |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
885 GetTransferSyntaxUid(transferSyntax)); |
4506
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refactoring ServerIndex::Store()
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diff
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|
886 } |
3086
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diff
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|
887 |
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diff
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|
888 { |
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|
889 std::string s; |
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parents:
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diff
changeset
|
890 |
4506
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
891 if (origin.LookupRemoteIp(s)) |
3086
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
892 { |
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changeset
|
893 // New in Orthanc 1.4.0 |
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changeset
|
894 SetInstanceMetadata(content, instanceMetadata, instanceId, |
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parents:
3083
diff
changeset
|
895 MetadataType_Instance_RemoteIp, s); |
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diff
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|
896 } |
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diff
changeset
|
897 |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
898 if (origin.LookupCalledAet(s)) |
3086
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
899 { |
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parents:
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diff
changeset
|
900 // New in Orthanc 1.4.0 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
901 SetInstanceMetadata(content, instanceMetadata, instanceId, |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
902 MetadataType_Instance_CalledAet, s); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
903 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
904 |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
905 if (origin.LookupHttpUsername(s)) |
3086
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
906 { |
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grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
907 // New in Orthanc 1.4.0 |
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grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
908 SetInstanceMetadata(content, instanceMetadata, instanceId, |
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grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
909 MetadataType_Instance_HttpUsername, s); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
910 } |
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diff
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|
911 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
912 |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
913 if (hasPixelDataOffset) |
5b929e6b3c36
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
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|
914 { |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
915 // New in Orthanc 1.9.1 |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
916 SetInstanceMetadata(content, instanceMetadata, instanceId, |
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removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
917 MetadataType_Instance_PixelDataOffset, |
5b929e6b3c36
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
918 boost::lexical_cast<std::string>(pixelDataOffset)); |
5b929e6b3c36
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
919 } |
3086
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diff
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|
920 |
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parents:
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diff
changeset
|
921 const DicomValue* value; |
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parents:
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diff
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|
922 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_SOP_CLASS_UID)) != NULL && |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
923 !value->IsNull() && |
74e3e48aa9bd
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
924 !value->IsBinary()) |
74e3e48aa9bd
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parents:
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diff
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|
925 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
926 SetInstanceMetadata(content, instanceMetadata, instanceId, |
74e3e48aa9bd
grouping the setting of metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3083
diff
changeset
|
927 MetadataType_Instance_SopClassUid, value->GetContent()); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
928 } |
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diff
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|
929 |
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|
930 |
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diff
changeset
|
931 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_INSTANCE_NUMBER)) != NULL || |
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parents:
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diff
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|
932 (value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGE_INDEX)) != NULL) |
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|
933 { |
74e3e48aa9bd
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|
934 if (!value->IsNull() && |
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diff
changeset
|
935 !value->IsBinary()) |
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|
936 { |
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parents:
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diff
changeset
|
937 SetInstanceMetadata(content, instanceMetadata, instanceId, |
4263
61a2bedbae80
sanitize IndexInSeries (we've seen spaces there !)
Alain Mazy <alain@mazy.be>
parents:
4205
diff
changeset
|
938 MetadataType_Instance_IndexInSeries, Toolbox::StripSpaces(value->GetContent())); |
3086
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|
939 } |
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|
940 } |
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|
941 |
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changeset
|
942 |
3083
683d572424b6
IDatabaseWrapper::SetResourcesContent
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parents:
3082
diff
changeset
|
943 db_.SetResourcesContent(content); |
3080
1a75595d8e44
started refactoring of ServerIndex::Store()
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3075
diff
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|
944 } |
3086
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|
945 |
3090
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|
946 |
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diff
changeset
|
947 // Check whether the series of this new instance is now completed |
3187
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parents:
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diff
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|
948 int64_t expectedNumberOfInstances; |
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|
949 if (ComputeExpectedNumberOfInstances(expectedNumberOfInstances, dicomSummary)) |
205
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diff
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|
950 { |
4554 | 951 SeriesStatus seriesStatus = GetSeriesStatus(db_, status.seriesId_, expectedNumberOfInstances); |
3187
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|
952 if (seriesStatus == SeriesStatus_Complete) |
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|
953 { |
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changeset
|
954 LogChange(status.seriesId_, ChangeType_CompletedSeries, ResourceType_Series, hashSeries); |
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|
955 } |
205
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|
956 } |
3087 | 957 |
205
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logging of completed series
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|
958 |
511
3b735fdf320b
monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
959 // Mark the parent resources of this instance as unstable |
3080
1a75595d8e44
started refactoring of ServerIndex::Store()
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parents:
3075
diff
changeset
|
960 MarkAsUnstable(status.seriesId_, ResourceType_Series, hashSeries); |
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started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
961 MarkAsUnstable(status.studyId_, ResourceType_Study, hashStudy); |
1a75595d8e44
started refactoring of ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3075
diff
changeset
|
962 MarkAsUnstable(status.patientId_, ResourceType_Patient, hashPatient); |
511
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|
963 |
278
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more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
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273
diff
changeset
|
964 t.Commit(instanceSize); |
268
4bc02e2254ec
preparing ServerIndex for recycling
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264
diff
changeset
|
965 |
0 | 966 return StoreStatus_Success; |
967 } | |
62 | 968 catch (OrthancException& e) |
0 | 969 { |
1247 | 970 LOG(ERROR) << "EXCEPTION [" << e.What() << "]"; |
0 | 971 } |
972 | |
973 return StoreStatus_Failure; | |
974 } | |
975 | |
976 | |
4554 | 977 SeriesStatus ServerIndex::GetSeriesStatus(IDatabaseWrapper& db, |
978 int64_t id, | |
3090
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starting optimization of SeriesIndex::GetSeriesStatus()
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diff
changeset
|
979 int64_t expectedNumberOfInstances) |
199 | 980 { |
3091
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IDatabaseWrapper::GetChildrenMetadata()
Sebastien Jodogne <s.jodogne@gmail.com>
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3090
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changeset
|
981 std::list<std::string> values; |
4554 | 982 db.GetChildrenMetadata(values, id, MetadataType_Instance_IndexInSeries); |
199 | 983 |
1238 | 984 std::set<int64_t> instances; |
3091
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IDatabaseWrapper::GetChildrenMetadata()
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|
985 |
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IDatabaseWrapper::GetChildrenMetadata()
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parents:
3090
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changeset
|
986 for (std::list<std::string>::const_iterator |
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IDatabaseWrapper::GetChildrenMetadata()
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parents:
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diff
changeset
|
987 it = values.begin(); it != values.end(); ++it) |
199 | 988 { |
1238 | 989 int64_t index; |
3091
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IDatabaseWrapper::GetChildrenMetadata()
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|
990 |
476cba12c2b0
IDatabaseWrapper::GetChildrenMetadata()
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diff
changeset
|
991 try |
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IDatabaseWrapper::GetChildrenMetadata()
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parents:
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diff
changeset
|
992 { |
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IDatabaseWrapper::GetChildrenMetadata()
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|
993 index = boost::lexical_cast<int64_t>(*it); |
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|
994 } |
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IDatabaseWrapper::GetChildrenMetadata()
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|
995 catch (boost::bad_lexical_cast&) |
199 | 996 { |
997 return SeriesStatus_Unknown; | |
998 } | |
3091
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|
999 |
3090
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starting optimization of SeriesIndex::GetSeriesStatus()
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changeset
|
1000 if (!(index > 0 && index <= expectedNumberOfInstances)) |
199 | 1001 { |
1002 // Out-of-range instance index | |
1003 return SeriesStatus_Inconsistent; | |
1004 } | |
1005 | |
1006 if (instances.find(index) != instances.end()) | |
1007 { | |
1008 // Twice the same instance index | |
1009 return SeriesStatus_Inconsistent; | |
1010 } | |
1011 | |
1012 instances.insert(index); | |
1013 } | |
1014 | |
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starting optimization of SeriesIndex::GetSeriesStatus()
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|
1015 if (static_cast<int64_t>(instances.size()) == expectedNumberOfInstances) |
199 | 1016 { |
1017 return SeriesStatus_Complete; | |
1018 } | |
1019 else | |
1020 { | |
1021 return SeriesStatus_Missing; | |
1022 } | |
1023 } | |
1024 | |
1025 | |
202 | 1026 void ServerIndex::MainDicomTagsToJson(Json::Value& target, |
4554 | 1027 IDatabaseWrapper& db, |
1668
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diff
changeset
|
1028 int64_t resourceId, |
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|
1029 ResourceType resourceType) |
198
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1030 { |
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|
1031 DicomMap tags; |
4554 | 1032 db.GetMainDicomTags(tags, resourceId); |
1676
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diff
changeset
|
1033 |
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changeset
|
1034 if (resourceType == ResourceType_Study) |
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|
1035 { |
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changeset
|
1036 DicomMap t1, t2; |
f079f3efe33b
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changeset
|
1037 tags.ExtractStudyInformation(t1); |
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diff
changeset
|
1038 tags.ExtractPatientInformation(t2); |
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diff
changeset
|
1039 |
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diff
changeset
|
1040 target["MainDicomTags"] = Json::objectValue; |
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1041 FromDcmtkBridge::ToJson(target["MainDicomTags"], t1, true); |
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1042 |
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1043 target["PatientMainDicomTags"] = Json::objectValue; |
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1044 FromDcmtkBridge::ToJson(target["PatientMainDicomTags"], t2, true); |
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1045 } |
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1046 else |
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1047 { |
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1048 target["MainDicomTags"] = Json::objectValue; |
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1049 FromDcmtkBridge::ToJson(target["MainDicomTags"], tags, true); |
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1050 } |
198
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1051 } |
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1052 |
3090
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1053 |
1244 | 1054 template <typename T> |
1055 static void FormatLog(Json::Value& target, | |
1056 const std::list<T>& log, | |
1057 const std::string& name, | |
1058 bool done, | |
3105
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1059 int64_t since, |
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1060 bool hasLast, |
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1061 int64_t last) |
1240 | 1062 { |
1063 Json::Value items = Json::arrayValue; | |
1244 | 1064 for (typename std::list<T>::const_iterator |
1304 | 1065 it = log.begin(); it != log.end(); ++it) |
1240 | 1066 { |
1067 Json::Value item; | |
1068 it->Format(item); | |
1069 items.append(item); | |
1070 } | |
1071 | |
1072 target = Json::objectValue; | |
1244 | 1073 target[name] = items; |
1240 | 1074 target["Done"] = done; |
1075 | |
3105
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1076 if (!hasLast) |
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1077 { |
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1078 // Best-effort guess of the last index in the sequence |
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1079 if (log.empty()) |
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1080 { |
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1081 last = since; |
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1082 } |
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1083 else |
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1084 { |
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1085 last = log.back().GetSeq(); |
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1086 } |
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1087 } |
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1088 |
1240 | 1089 target["Last"] = static_cast<int>(last); |
1090 } | |
1091 | |
1092 | |
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1093 bool ServerIndex::IsRecyclingNeeded(uint64_t instanceSize) |
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1094 { |
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1095 if (maximumStorageSize_ != 0) |
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1096 { |
3020
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1097 assert(maximumStorageSize_ >= instanceSize); |
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1098 |
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1099 if (db_.IsDiskSizeAbove(maximumStorageSize_ - instanceSize)) |
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1100 { |
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1101 return true; |
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1102 } |
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1103 } |
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1104 |
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1105 if (maximumPatients_ != 0) |
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1106 { |
1247 | 1107 uint64_t patientCount = db_.GetResourceCount(ResourceType_Patient); |
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1108 if (patientCount > maximumPatients_) |
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1109 { |
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1110 return true; |
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1111 } |
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1112 } |
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1113 |
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1114 return false; |
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1115 } |
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1116 |
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1117 |
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1118 void ServerIndex::Recycle(uint64_t instanceSize, |
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1119 const std::string& newPatientId) |
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1120 { |
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1121 if (!IsRecyclingNeeded(instanceSize)) |
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1122 { |
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1123 return; |
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1124 } |
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1125 |
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1126 // Check whether other DICOM instances from this patient are |
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1127 // already stored |
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1128 int64_t patientToAvoid; |
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1129 ResourceType type; |
1294 | 1130 bool hasPatientToAvoid = db_.LookupResource(patientToAvoid, type, newPatientId); |
268
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1131 |
269
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1132 if (hasPatientToAvoid && type != ResourceType_Patient) |
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1133 { |
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1134 throw OrthancException(ErrorCode_InternalError); |
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1135 } |
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1136 |
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1137 // Iteratively select patient to remove until there is enough |
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1138 // space in the DICOM store |
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1139 int64_t patientToRecycle; |
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1140 while (true) |
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1141 { |
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1142 // If other instances of this patient are already in the store, |
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1143 // we must avoid to recycle them |
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1144 bool ok = hasPatientToAvoid ? |
1247 | 1145 db_.SelectPatientToRecycle(patientToRecycle, patientToAvoid) : |
1146 db_.SelectPatientToRecycle(patientToRecycle); | |
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1147 |
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1148 if (!ok) |
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1149 { |
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1150 throw OrthancException(ErrorCode_FullStorage); |
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1151 } |
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1152 |
4268
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1153 LOG(TRACE) << "Recycling one patient"; |
1247 | 1154 db_.DeleteResource(patientToRecycle); |
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1155 |
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1156 if (!IsRecyclingNeeded(instanceSize)) |
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1157 { |
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1158 // OK, we're done |
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1159 break; |
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1160 } |
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1161 } |
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1162 } |
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1163 |
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1164 void ServerIndex::SetMaximumPatientCount(unsigned int count) |
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1165 { |
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1166 boost::mutex::scoped_lock lock(mutex_); |
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1167 maximumPatients_ = count; |
270
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1168 |
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1169 if (count == 0) |
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1170 { |
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1171 LOG(WARNING) << "No limit on the number of stored patients"; |
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1172 } |
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1173 else |
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1174 { |
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1175 LOG(WARNING) << "At most " << count << " patients will be stored"; |
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1176 } |
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1177 |
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1178 StandaloneRecycling(); |
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1179 } |
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1180 |
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1181 void ServerIndex::SetMaximumStorageSize(uint64_t size) |
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1182 { |
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1183 boost::mutex::scoped_lock lock(mutex_); |
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1184 maximumStorageSize_ = size; |
270
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1185 |
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1186 if (size == 0) |
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1187 { |
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1188 LOG(WARNING) << "No limit on the size of the storage area"; |
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1189 } |
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1190 else |
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1191 { |
440
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1192 LOG(WARNING) << "At most " << (size / MEGA_BYTES) << "MB will be used for the storage area"; |
270
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1193 } |
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1194 |
269
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1195 StandaloneRecycling(); |
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1196 } |
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1197 |
2825
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1198 |
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1199 void ServerIndex::StandaloneRecycling() |
269
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1200 { |
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1201 // WARNING: No mutex here, do not include this as a public method |
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1202 Transaction t(*this); |
269
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1203 Recycle(0, ""); |
278
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1204 t.Commit(0); |
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1205 } |
272
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1206 |
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1207 |
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1208 void ServerIndex::UnstableResourcesMonitorThread(ServerIndex* that, |
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1209 unsigned int threadSleep) |
511
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1210 { |
2940
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1211 int stableAge; |
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1212 |
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1213 { |
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1214 OrthancConfiguration::ReaderLock lock; |
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1215 stableAge = lock.GetConfiguration().GetUnsignedIntegerParameter("StableAge", 60); |
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1216 } |
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1217 |
511
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1218 if (stableAge <= 0) |
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1219 { |
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1220 stableAge = 60; |
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1221 } |
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1222 |
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1223 LOG(INFO) << "Starting the monitor for stable resources (stable age = " << stableAge << ")"; |
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1224 |
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1225 while (!that->done_) |
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1226 { |
2665
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1227 // Check for stable resources each few seconds |
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1228 boost::this_thread::sleep(boost::posix_time::milliseconds(threadSleep)); |
511
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1229 |
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1230 boost::mutex::scoped_lock lock(that->mutex_); |
513 | 1231 |
511
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1232 while (!that->unstableResources_.IsEmpty() && |
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1233 that->unstableResources_.GetOldestPayload().GetAge() > static_cast<unsigned int>(stableAge)) |
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1234 { |
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1235 // This DICOM resource has not received any new instance for |
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1236 // some time. It can be considered as stable. |
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1237 |
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1238 UnstableResourcePayload payload; |
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1239 int64_t id = that->unstableResources_.RemoveOldest(payload); |
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1240 |
513 | 1241 // Ensure that the resource is still existing before logging the change |
1247 | 1242 if (that->db_.IsExistingResource(id)) |
511
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1243 { |
1177
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1244 switch (payload.GetResourceType()) |
513 | 1245 { |
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1246 case ResourceType_Patient: |
1237 | 1247 that->LogChange(id, ChangeType_StablePatient, ResourceType_Patient, payload.GetPublicId()); |
513 | 1248 break; |
511
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1249 |
1177
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1250 case ResourceType_Study: |
1237 | 1251 that->LogChange(id, ChangeType_StableStudy, ResourceType_Study, payload.GetPublicId()); |
513 | 1252 break; |
511
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1253 |
1177
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1254 case ResourceType_Series: |
1237 | 1255 that->LogChange(id, ChangeType_StableSeries, ResourceType_Series, payload.GetPublicId()); |
513 | 1256 break; |
1257 | |
1258 default: | |
1259 throw OrthancException(ErrorCode_InternalError); | |
1260 } | |
1261 | |
1262 //LOG(INFO) << "Stable resource: " << EnumerationToString(payload.type_) << " " << id; | |
511
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1263 } |
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1264 } |
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1265 } |
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1266 |
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1267 LOG(INFO) << "Closing the monitor thread for stable resources"; |
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1268 } |
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1269 |
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1270 |
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1271 void ServerIndex::MarkAsUnstable(int64_t id, |
1177
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1272 Orthanc::ResourceType type, |
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1273 const std::string& publicId) |
511
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1274 { |
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1275 // WARNING: Before calling this method, "mutex_" must be locked. |
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1276 |
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1277 assert(type == Orthanc::ResourceType_Patient || |
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1278 type == Orthanc::ResourceType_Study || |
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1279 type == Orthanc::ResourceType_Series); |
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1280 |
1177
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1281 UnstableResourcePayload payload(type, publicId); |
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1282 unstableResources_.AddOrMakeMostRecent(id, payload); |
511
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1283 //LOG(INFO) << "Unstable resource: " << EnumerationToString(type) << " " << id; |
1189
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1284 |
1237 | 1285 LogChange(id, ChangeType_NewChildInstance, type, publicId); |
511
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1286 } |
521 | 1287 |
1288 | |
1289 | |
699
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1290 StoreStatus ServerIndex::AddAttachment(const FileInfo& attachment, |
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1291 const std::string& publicId) |
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1292 { |
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1293 boost::mutex::scoped_lock lock(mutex_); |
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1294 |
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|
1295 Transaction t(*this); |
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1296 |
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|
1297 ResourceType resourceType; |
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|
1298 int64_t resourceId; |
1294 | 1299 if (!db_.LookupResource(resourceId, resourceType, publicId)) |
699
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1300 { |
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1301 return StoreStatus_Failure; // Inexistent resource |
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1302 } |
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1303 |
704
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|
1304 // Remove possible previous attachment |
1247 | 1305 db_.DeleteAttachment(resourceId, attachment.GetContentType()); |
699
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1306 |
704
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1307 // Locate the patient of the target resource |
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1308 int64_t patientId = resourceId; |
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|
1309 for (;;) |
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1310 { |
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|
1311 int64_t parent; |
1247 | 1312 if (db_.LookupParent(parent, patientId)) |
704
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1313 { |
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1314 // We have not reached the patient level yet |
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1315 patientId = parent; |
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|
1316 } |
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|
1317 else |
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|
1318 { |
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|
1319 // We have reached the patient level |
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|
1320 break; |
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|
1321 } |
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|
1322 } |
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|
1323 |
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|
1324 // Possibly apply the recycling mechanism while preserving this patient |
1247 | 1325 assert(db_.GetResourceType(patientId) == ResourceType_Patient); |
1326 Recycle(attachment.GetCompressedSize(), db_.GetPublicId(patientId)); | |
704
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|
1327 |
1247 | 1328 db_.AddAttachment(resourceId, attachment); |
699
2929e17f8447
add attachments to resources
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1329 |
1773
613df4362575
New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1330 if (IsUserContentType(attachment.GetContentType())) |
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New UpdatedAttachment and UpdatedMetadata events in plugins
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diff
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|
1331 { |
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New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1332 LogChange(resourceId, ChangeType_UpdatedAttachment, resourceType, publicId); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1333 } |
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New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1334 |
699
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diff
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|
1335 t.Commit(attachment.GetCompressedSize()); |
2929e17f8447
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|
1336 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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1337 return StoreStatus_Success; |
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|
1338 } |
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|
1339 |
702
7592a48e97e4
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|
1340 |
4205 | 1341 void ServerIndex::ReconstructInstance(const ParsedDicomFile& dicom) |
2209
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1342 { |
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|
1343 DicomMap summary; |
4140
0ddc5297a8ab
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diff
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|
1344 OrthancConfiguration::DefaultExtractDicomSummary(summary, dicom); |
2209
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1345 |
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1346 DicomInstanceHasher hasher(summary); |
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1347 |
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1348 boost::mutex::scoped_lock lock(mutex_); |
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1349 |
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1350 try |
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1351 { |
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1352 Transaction t(*this); |
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1353 |
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1354 int64_t patient = -1, study = -1, series = -1, instance = -1; |
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1355 |
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1356 ResourceType dummy; |
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1357 if (!db_.LookupResource(patient, dummy, hasher.HashPatient()) || |
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1358 !db_.LookupResource(study, dummy, hasher.HashStudy()) || |
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1359 !db_.LookupResource(series, dummy, hasher.HashSeries()) || |
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1360 !db_.LookupResource(instance, dummy, hasher.HashInstance()) || |
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1361 patient == -1 || |
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1362 study == -1 || |
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1363 series == -1 || |
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1364 instance == -1) |
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1365 { |
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1366 throw OrthancException(ErrorCode_InternalError); |
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1367 } |
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1368 |
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1369 db_.ClearMainDicomTags(patient); |
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1370 db_.ClearMainDicomTags(study); |
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1371 db_.ClearMainDicomTags(series); |
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1372 db_.ClearMainDicomTags(instance); |
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1373 |
3083
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1374 { |
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1375 ResourcesContent content; |
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IDatabaseWrapper::SetResourcesContent
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1376 content.AddResource(patient, ResourceType_Patient, summary); |
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IDatabaseWrapper::SetResourcesContent
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1377 content.AddResource(study, ResourceType_Study, summary); |
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1378 content.AddResource(series, ResourceType_Series, summary); |
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1379 content.AddResource(instance, ResourceType_Instance, summary); |
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1380 db_.SetResourcesContent(content); |
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1381 } |
2209
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1382 |
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1383 { |
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1384 DicomTransferSyntax s; |
2209
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1385 if (dicom.LookupTransferSyntax(s)) |
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1386 { |
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1387 db_.SetMetadata(instance, MetadataType_Instance_TransferSyntax, GetTransferSyntaxUid(s)); |
2209
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1388 } |
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1389 } |
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1390 |
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1391 const DicomValue* value; |
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1392 if ((value = summary.TestAndGetValue(DICOM_TAG_SOP_CLASS_UID)) != NULL && |
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1393 !value->IsNull() && |
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1394 !value->IsBinary()) |
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1395 { |
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1396 db_.SetMetadata(instance, MetadataType_Instance_SopClassUid, value->GetContent()); |
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1397 } |
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1398 |
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1399 t.Commit(0); // No change in the DB size |
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1400 } |
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1401 catch (OrthancException& e) |
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1402 { |
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1403 LOG(ERROR) << "EXCEPTION [" << e.What() << "]"; |
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1404 } |
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1405 } |
3025
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1406 |
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1407 |
3029
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1408 void ServerIndex::NormalizeLookup(std::vector<DatabaseConstraint>& target, |
3027 | 1409 const DatabaseLookup& source, |
1410 ResourceType queryLevel) const | |
1411 { | |
1412 assert(mainDicomTagsRegistry_.get() != NULL); | |
3029
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1413 |
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1414 target.clear(); |
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1415 target.reserve(source.GetConstraintsCount()); |
3031 | 1416 |
3027 | 1417 for (size_t i = 0; i < source.GetConstraintsCount(); i++) |
1418 { | |
3031 | 1419 ResourceType level; |
1420 DicomTagType type; | |
3027 | 1421 |
3031 | 1422 mainDicomTagsRegistry_->LookupTag(level, type, source.GetConstraint(i).GetTag()); |
1423 | |
1424 if (type == DicomTagType_Identifier || | |
1425 type == DicomTagType_Main) | |
3027 | 1426 { |
3029
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1427 // Use the fact that patient-level tags are copied at the study level |
3031 | 1428 if (level == ResourceType_Patient && |
1429 queryLevel != ResourceType_Patient) | |
3027 | 1430 { |
3031 | 1431 level = ResourceType_Study; |
3027 | 1432 } |
3029
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1433 |
3073
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1434 target.push_back(source.GetConstraint(i).ConvertToDatabaseConstraint(level, type)); |
3027 | 1435 } |
1436 } | |
1437 } | |
1438 | |
1439 | |
4551
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1440 |
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1441 |
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1442 |
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1443 /*** |
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1444 ** PROTOTYPING FOR DB REFACTORING BELOW |
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1445 ***/ |
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1446 |
4557
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1447 namespace |
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1448 { |
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1449 /** |
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1450 * Some handy templates to reduce the verbosity in the definitions |
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1451 * of the internal classes. |
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1452 **/ |
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1453 |
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1454 template <typename Operations, |
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1455 typename Tuple> |
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1456 class TupleOperationsWrapper : public ServerIndex::IReadOnlyOperations |
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1457 { |
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1458 protected: |
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1459 Operations& operations_; |
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1460 const Tuple& tuple_; |
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1461 |
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1462 public: |
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1463 TupleOperationsWrapper(Operations& operations, |
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1464 const Tuple& tuple) : |
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1465 operations_(operations), |
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1466 tuple_(tuple) |
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1467 { |
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1468 } |
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1469 |
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1470 virtual void Apply(ServerIndex::ReadOnlyTransaction& transaction) ORTHANC_OVERRIDE |
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1471 { |
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1472 operations_.ApplyTuple(transaction, tuple_); |
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1473 } |
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1474 }; |
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1475 |
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1476 |
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1477 template <typename T1> |
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1478 class ReadOnlyOperationsT1 : public boost::noncopyable |
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1479 { |
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1480 public: |
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1481 typedef typename boost::tuple<T1> Tuple; |
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1482 |
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1483 virtual ~ReadOnlyOperationsT1() |
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1484 { |
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1485 } |
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1486 |
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1487 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, |
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1488 const Tuple& tuple) = 0; |
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1489 |
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1490 void Apply(ServerIndex& index, |
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1491 T1 t1) |
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1492 { |
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1493 const Tuple tuple(t1); |
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1494 TupleOperationsWrapper<ReadOnlyOperationsT1, Tuple> wrapper(*this, tuple); |
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1495 index.Apply(wrapper); |
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1496 } |
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1497 }; |
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1498 |
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1499 |
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1500 template <typename T1, |
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1501 typename T2> |
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1502 class ReadOnlyOperationsT2 : public boost::noncopyable |
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1503 { |
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1504 public: |
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1505 typedef typename boost::tuple<T1, T2> Tuple; |
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1506 |
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1507 virtual ~ReadOnlyOperationsT2() |
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1508 { |
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1509 } |
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1510 |
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1511 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, |
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1512 const Tuple& tuple) = 0; |
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1513 |
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1514 void Apply(ServerIndex& index, |
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1515 T1 t1, |
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1516 T2 t2) |
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1517 { |
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1518 const Tuple tuple(t1, t2); |
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1519 TupleOperationsWrapper<ReadOnlyOperationsT2, Tuple> wrapper(*this, tuple); |
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1520 index.Apply(wrapper); |
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1521 } |
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1522 }; |
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1523 |
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1524 |
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1525 template <typename T1, |
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1526 typename T2, |
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1527 typename T3> |
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1528 class ReadOnlyOperationsT3 : public boost::noncopyable |
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1529 { |
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1530 public: |
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1531 typedef typename boost::tuple<T1, T2, T3> Tuple; |
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1532 |
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1533 virtual ~ReadOnlyOperationsT3() |
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1534 { |
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1535 } |
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1536 |
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1537 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, |
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1538 const Tuple& tuple) = 0; |
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1539 |
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1540 void Apply(ServerIndex& index, |
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1541 T1 t1, |
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1542 T2 t2, |
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1543 T3 t3) |
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1544 { |
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1545 const Tuple tuple(t1, t2, t3); |
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1546 TupleOperationsWrapper<ReadOnlyOperationsT3, Tuple> wrapper(*this, tuple); |
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1547 index.Apply(wrapper); |
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1548 } |
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1549 }; |
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1550 |
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1551 |
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1552 template <typename T1, |
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1553 typename T2, |
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1554 typename T3, |
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1555 typename T4> |
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1556 class ReadOnlyOperationsT4 : public boost::noncopyable |
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1557 { |
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1558 public: |
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1559 typedef typename boost::tuple<T1, T2, T3, T4> Tuple; |
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1560 |
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1561 virtual ~ReadOnlyOperationsT4() |
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1562 { |
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templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1563 } |
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templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1564 |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
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parents:
4556
diff
changeset
|
1565 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
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parents:
4556
diff
changeset
|
1566 const Tuple& tuple) = 0; |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1567 |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1568 void Apply(ServerIndex& index, |
4566
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1569 T1 t1, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1570 T2 t2, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1571 T3 t3, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1572 T4 t4) |
4557
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1573 { |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
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parents:
4556
diff
changeset
|
1574 const Tuple tuple(t1, t2, t3, t4); |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1575 TupleOperationsWrapper<ReadOnlyOperationsT4, Tuple> wrapper(*this, tuple); |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1576 index.Apply(wrapper); |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1577 } |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1578 }; |
4558 | 1579 |
1580 | |
1581 template <typename T1, | |
1582 typename T2, | |
1583 typename T3, | |
1584 typename T4, | |
1585 typename T5> | |
1586 class ReadOnlyOperationsT5 : public boost::noncopyable | |
1587 { | |
1588 public: | |
1589 typedef typename boost::tuple<T1, T2, T3, T4, T5> Tuple; | |
1590 | |
1591 virtual ~ReadOnlyOperationsT5() | |
1592 { | |
1593 } | |
1594 | |
1595 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, | |
1596 const Tuple& tuple) = 0; | |
1597 | |
1598 void Apply(ServerIndex& index, | |
4566
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
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4565
diff
changeset
|
1599 T1 t1, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1600 T2 t2, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1601 T3 t3, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1602 T4 t4, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1603 T5 t5) |
4558 | 1604 { |
1605 const Tuple tuple(t1, t2, t3, t4, t5); | |
1606 TupleOperationsWrapper<ReadOnlyOperationsT5, Tuple> wrapper(*this, tuple); | |
1607 index.Apply(wrapper); | |
1608 } | |
1609 }; | |
1610 | |
1611 | |
1612 template <typename T1, | |
1613 typename T2, | |
1614 typename T3, | |
1615 typename T4, | |
1616 typename T5, | |
1617 typename T6> | |
1618 class ReadOnlyOperationsT6 : public boost::noncopyable | |
1619 { | |
1620 public: | |
1621 typedef typename boost::tuple<T1, T2, T3, T4, T5, T6> Tuple; | |
1622 | |
1623 virtual ~ReadOnlyOperationsT6() | |
1624 { | |
1625 } | |
1626 | |
1627 virtual void ApplyTuple(ServerIndex::ReadOnlyTransaction& transaction, | |
1628 const Tuple& tuple) = 0; | |
1629 | |
1630 void Apply(ServerIndex& index, | |
4566
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1631 T1 t1, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1632 T2 t2, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1633 T3 t3, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1634 T4 t4, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1635 T5 t5, |
f52d0bc19e07
fix build for msvc2008
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4565
diff
changeset
|
1636 T6 t6) |
4558 | 1637 { |
1638 const Tuple tuple(t1, t2, t3, t4, t5, t6); | |
1639 TupleOperationsWrapper<ReadOnlyOperationsT6, Tuple> wrapper(*this, tuple); | |
1640 index.Apply(wrapper); | |
1641 } | |
1642 }; | |
4557
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
changeset
|
1643 } |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1644 |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4556
diff
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|
1645 |
4551
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4514
diff
changeset
|
1646 void ServerIndex::ApplyInternal(IReadOnlyOperations* readOperations, |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1647 IReadWriteOperations* writeOperations) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1648 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1649 if ((readOperations == NULL && writeOperations == NULL) || |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1650 (readOperations != NULL && writeOperations != NULL)) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1651 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1652 throw OrthancException(ErrorCode_InternalError); |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1653 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1654 |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4514
diff
changeset
|
1655 unsigned int count = 0; |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4514
diff
changeset
|
1656 |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1657 for (;;) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1658 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1659 try |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1660 { |
4554 | 1661 boost::mutex::scoped_lock lock(mutex_); // TODO - REMOVE |
1662 | |
4558 | 1663 Transaction transaction(*this); // TODO - Only if "TransactionType_SingleStatement" |
1664 | |
4551
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1665 if (readOperations != NULL) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1666 { |
4562 | 1667 ReadOnlyTransaction t(db_); |
1668 readOperations->Apply(t); | |
4551
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1669 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1670 else |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1671 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1672 assert(writeOperations != NULL); |
4567 | 1673 ReadWriteTransaction t(db_, *this); |
4565
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
1674 writeOperations->Apply(t, *listener_); |
4551
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1675 } |
4558 | 1676 |
1677 transaction.Commit(0); | |
4551
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1678 |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1679 return; // Success |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1680 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1681 catch (OrthancException& e) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1682 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1683 if (e.GetErrorCode() == ErrorCode_DatabaseCannotSerialize) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1684 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1685 if (count == maxRetries_) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1686 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1687 throw; |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1688 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1689 else |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1690 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1691 count++; |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1692 boost::this_thread::sleep(boost::posix_time::milliseconds(100 * count)); |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1693 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1694 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1695 else if (e.GetErrorCode() == ErrorCode_DatabaseUnavailable) |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1696 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1697 if (count == maxRetries_) |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1698 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1699 throw; |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1700 } |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1701 else |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1702 { |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1703 count++; |
350a22c094f2
testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4514
diff
changeset
|
1704 boost::this_thread::sleep(boost::posix_time::milliseconds(1000)); |
350a22c094f2
testing replay of transactions
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diff
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|
1705 } |
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diff
changeset
|
1706 } |
350a22c094f2
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4514
diff
changeset
|
1707 else |
350a22c094f2
testing replay of transactions
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4514
diff
changeset
|
1708 { |
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testing replay of transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4514
diff
changeset
|
1709 throw; |
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testing replay of transactions
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4514
diff
changeset
|
1710 } |
350a22c094f2
testing replay of transactions
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parents:
4514
diff
changeset
|
1711 } |
350a22c094f2
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parents:
4514
diff
changeset
|
1712 } |
350a22c094f2
testing replay of transactions
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4514
diff
changeset
|
1713 } |
4561
02510325d869
removed function wrappers for transactions in ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
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4560
diff
changeset
|
1714 |
4551
350a22c094f2
testing replay of transactions
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4514
diff
changeset
|
1715 |
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4514
diff
changeset
|
1716 void ServerIndex::Apply(IReadOnlyOperations& operations) |
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testing replay of transactions
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4514
diff
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|
1717 { |
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diff
changeset
|
1718 ApplyInternal(&operations, NULL); |
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testing replay of transactions
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4514
diff
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|
1719 } |
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4514
diff
changeset
|
1720 |
4561
02510325d869
removed function wrappers for transactions in ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
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4560
diff
changeset
|
1721 |
4551
350a22c094f2
testing replay of transactions
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4514
diff
changeset
|
1722 void ServerIndex::Apply(IReadWriteOperations& operations) |
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testing replay of transactions
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diff
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|
1723 { |
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diff
changeset
|
1724 ApplyInternal(NULL, &operations); |
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diff
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|
1725 } |
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diff
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|
1726 |
4554 | 1727 |
1728 bool ServerIndex::ExpandResource(Json::Value& target, | |
1729 const std::string& publicId, | |
1730 ResourceType level) | |
1731 { | |
4564
5a0adc1c19a9
avoid copy of objects in ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
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4563
diff
changeset
|
1732 class Operations : public ReadOnlyOperationsT4<bool&, Json::Value&, const std::string&, ResourceType> |
4554 | 1733 { |
1734 private: | |
4567 | 1735 ServerIndex& index_; // TODO - REMOVE |
4554 | 1736 |
1737 public: | |
4562 | 1738 explicit Operations(ServerIndex& index) : |
1739 index_(index) | |
4554 | 1740 { |
1741 } | |
1742 | |
4557
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
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diff
changeset
|
1743 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
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changeset
|
1744 const Tuple& tuple) ORTHANC_OVERRIDE |
b6d4b735eb4d
templates to reduce verbosity in ServerIndex implementation
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diff
changeset
|
1745 { |
4554 | 1746 // Lookup for the requested resource |
1747 int64_t internalId; // unused | |
1748 ResourceType type; | |
1749 std::string parent; | |
4562 | 1750 if (!transaction.LookupResourceAndParent(internalId, type, parent, tuple.get<2>()) || |
1751 type != tuple.get<3>()) | |
4554 | 1752 { |
4564
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1753 tuple.get<0>() = false; |
4554 | 1754 } |
1755 else | |
1756 { | |
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1757 Json::Value& target = tuple.get<1>(); |
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1758 target = Json::objectValue; |
4554 | 1759 |
1760 // Set information about the parent resource (if it exists) | |
1761 if (type == ResourceType_Patient) | |
1762 { | |
1763 if (!parent.empty()) | |
1764 { | |
1765 throw OrthancException(ErrorCode_DatabasePlugin); | |
1766 } | |
1767 } | |
1768 else | |
1769 { | |
1770 if (parent.empty()) | |
1771 { | |
1772 throw OrthancException(ErrorCode_DatabasePlugin); | |
1773 } | |
1774 | |
1775 switch (type) | |
1776 { | |
1777 case ResourceType_Study: | |
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1778 target["ParentPatient"] = parent; |
4554 | 1779 break; |
1780 | |
1781 case ResourceType_Series: | |
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1782 target["ParentStudy"] = parent; |
4554 | 1783 break; |
1784 | |
1785 case ResourceType_Instance: | |
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1786 target["ParentSeries"] = parent; |
4554 | 1787 break; |
1788 | |
1789 default: | |
1790 throw OrthancException(ErrorCode_InternalError); | |
1791 } | |
1792 } | |
1793 | |
1794 // List the children resources | |
1795 std::list<std::string> children; | |
1796 transaction.GetChildrenPublicId(children, internalId); | |
1797 | |
1798 if (type != ResourceType_Instance) | |
1799 { | |
1800 Json::Value c = Json::arrayValue; | |
1801 | |
1802 for (std::list<std::string>::const_iterator | |
1803 it = children.begin(); it != children.end(); ++it) | |
1804 { | |
1805 c.append(*it); | |
1806 } | |
1807 | |
1808 switch (type) | |
1809 { | |
1810 case ResourceType_Patient: | |
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1811 target["Studies"] = c; |
4554 | 1812 break; |
1813 | |
1814 case ResourceType_Study: | |
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1815 target["Series"] = c; |
4554 | 1816 break; |
1817 | |
1818 case ResourceType_Series: | |
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1819 target["Instances"] = c; |
4554 | 1820 break; |
1821 | |
1822 default: | |
1823 throw OrthancException(ErrorCode_InternalError); | |
1824 } | |
1825 } | |
1826 | |
1827 // Extract the metadata | |
1828 std::map<MetadataType, std::string> metadata; | |
1829 transaction.GetAllMetadata(metadata, internalId); | |
1830 | |
1831 // Set the resource type | |
1832 switch (type) | |
1833 { | |
1834 case ResourceType_Patient: | |
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1835 target["Type"] = "Patient"; |
4554 | 1836 break; |
1837 | |
1838 case ResourceType_Study: | |
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1839 target["Type"] = "Study"; |
4554 | 1840 break; |
1841 | |
1842 case ResourceType_Series: | |
1843 { | |
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1844 target["Type"] = "Series"; |
4554 | 1845 |
1846 int64_t i; | |
1847 if (LookupIntegerMetadata(i, metadata, MetadataType_Series_ExpectedNumberOfInstances)) | |
1848 { | |
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1849 target["ExpectedNumberOfInstances"] = static_cast<int>(i); |
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1850 target["Status"] = EnumerationToString(transaction.GetSeriesStatus(internalId, i)); |
4554 | 1851 } |
1852 else | |
1853 { | |
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1854 target["ExpectedNumberOfInstances"] = Json::nullValue; |
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1855 target["Status"] = EnumerationToString(SeriesStatus_Unknown); |
4554 | 1856 } |
1857 | |
1858 break; | |
1859 } | |
1860 | |
1861 case ResourceType_Instance: | |
1862 { | |
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1863 target["Type"] = "Instance"; |
4554 | 1864 |
1865 FileInfo attachment; | |
1866 if (!transaction.LookupAttachment(attachment, internalId, FileContentType_Dicom)) | |
1867 { | |
1868 throw OrthancException(ErrorCode_InternalError); | |
1869 } | |
1870 | |
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1871 target["FileSize"] = static_cast<unsigned int>(attachment.GetUncompressedSize()); |
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1872 target["FileUuid"] = attachment.GetUuid(); |
4554 | 1873 |
1874 int64_t i; | |
1875 if (LookupIntegerMetadata(i, metadata, MetadataType_Instance_IndexInSeries)) | |
1876 { | |
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1877 target["IndexInSeries"] = static_cast<int>(i); |
4554 | 1878 } |
1879 else | |
1880 { | |
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1881 target["IndexInSeries"] = Json::nullValue; |
4554 | 1882 } |
1883 | |
1884 break; | |
1885 } | |
1886 | |
1887 default: | |
1888 throw OrthancException(ErrorCode_InternalError); | |
1889 } | |
1890 | |
1891 // Record the remaining information | |
4562 | 1892 target["ID"] = tuple.get<2>(); |
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1893 transaction.MainDicomTagsToJson(target, internalId, type); |
4554 | 1894 |
1895 std::string tmp; | |
1896 | |
1897 if (LookupStringMetadata(tmp, metadata, MetadataType_AnonymizedFrom)) | |
1898 { | |
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1899 target["AnonymizedFrom"] = tmp; |
4554 | 1900 } |
1901 | |
1902 if (LookupStringMetadata(tmp, metadata, MetadataType_ModifiedFrom)) | |
1903 { | |
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1904 target["ModifiedFrom"] = tmp; |
4554 | 1905 } |
1906 | |
1907 if (type == ResourceType_Patient || | |
1908 type == ResourceType_Study || | |
1909 type == ResourceType_Series) | |
1910 { | |
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1911 target["IsStable"] = !index_.IsUnstableResource(internalId); |
4554 | 1912 |
1913 if (LookupStringMetadata(tmp, metadata, MetadataType_LastUpdate)) | |
1914 { | |
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1915 target["LastUpdate"] = tmp; |
4554 | 1916 } |
1917 } | |
1918 | |
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1919 tuple.get<0>() = true; |
4554 | 1920 } |
1921 } | |
1922 }; | |
1923 | |
4562 | 1924 bool found; |
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1925 Operations operations(*this); |
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1926 operations.Apply(*this, found, target, publicId, level); |
4562 | 1927 return found; |
4554 | 1928 } |
1929 | |
1930 | |
1931 void ServerIndex::GetAllMetadata(std::map<MetadataType, std::string>& target, | |
1932 const std::string& publicId, | |
1933 ResourceType level) | |
1934 { | |
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1935 class Operations : public ReadOnlyOperationsT3<std::map<MetadataType, std::string>&, const std::string&, ResourceType> |
4554 | 1936 { |
1937 public: | |
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1938 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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1939 const Tuple& tuple) ORTHANC_OVERRIDE |
4554 | 1940 { |
1941 ResourceType type; | |
1942 int64_t id; | |
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1943 if (!transaction.LookupResource(id, type, tuple.get<1>()) || |
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1944 tuple.get<2>() != type) |
4554 | 1945 { |
1946 throw OrthancException(ErrorCode_UnknownResource); | |
1947 } | |
1948 else | |
1949 { | |
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1950 transaction.GetAllMetadata(tuple.get<0>(), id); |
4554 | 1951 } |
1952 } | |
1953 }; | |
1954 | |
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1955 Operations operations; |
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1956 operations.Apply(*this, target, publicId, level); |
4554 | 1957 } |
4555 | 1958 |
1959 | |
1960 bool ServerIndex::LookupAttachment(FileInfo& attachment, | |
1961 const std::string& instancePublicId, | |
1962 FileContentType contentType) | |
1963 { | |
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1964 class Operations : public ReadOnlyOperationsT4<bool&, FileInfo&, const std::string&, FileContentType> |
4555 | 1965 { |
1966 public: | |
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1967 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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1968 const Tuple& tuple) ORTHANC_OVERRIDE |
4555 | 1969 { |
1970 int64_t internalId; | |
1971 ResourceType type; | |
4562 | 1972 if (!transaction.LookupResource(internalId, type, tuple.get<2>())) |
4555 | 1973 { |
1974 throw OrthancException(ErrorCode_UnknownResource); | |
1975 } | |
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1976 else if (transaction.LookupAttachment(tuple.get<1>(), internalId, tuple.get<3>())) |
4555 | 1977 { |
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1978 assert(tuple.get<1>().GetContentType() == tuple.get<3>()); |
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1979 tuple.get<0>() = true; |
4555 | 1980 } |
1981 else | |
1982 { | |
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1983 tuple.get<0>() = false; |
4555 | 1984 } |
1985 } | |
1986 }; | |
1987 | |
4562 | 1988 bool found; |
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1989 Operations operations; |
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1990 operations.Apply(*this, found, attachment, instancePublicId, contentType); |
4562 | 1991 return found; |
4555 | 1992 } |
1993 | |
1994 | |
1995 void ServerIndex::GetAllUuids(std::list<std::string>& target, | |
1996 ResourceType resourceType) | |
1997 { | |
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1998 class Operations : public ReadOnlyOperationsT2<std::list<std::string>&, ResourceType> |
4555 | 1999 { |
2000 public: | |
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2001 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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2002 const Tuple& tuple) ORTHANC_OVERRIDE |
4555 | 2003 { |
4558 | 2004 // TODO - CANDIDATE FOR "TransactionType_SingleStatement" |
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2005 transaction.GetAllPublicIds(tuple.get<0>(), tuple.get<1>()); |
4555 | 2006 } |
2007 }; | |
2008 | |
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2009 Operations operations; |
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2010 operations.Apply(*this, target, resourceType); |
4555 | 2011 } |
2012 | |
2013 | |
2014 void ServerIndex::GetAllUuids(std::list<std::string>& target, | |
2015 ResourceType resourceType, | |
2016 size_t since, | |
2017 size_t limit) | |
2018 { | |
2019 if (limit == 0) | |
2020 { | |
2021 target.clear(); | |
2022 } | |
2023 else | |
2024 { | |
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2025 class Operations : public ReadOnlyOperationsT4<std::list<std::string>&, ResourceType, size_t, size_t> |
4555 | 2026 { |
2027 public: | |
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2028 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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2029 const Tuple& tuple) ORTHANC_OVERRIDE |
4555 | 2030 { |
4558 | 2031 // TODO - CANDIDATE FOR "TransactionType_SingleStatement" |
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2032 transaction.GetAllPublicIds(tuple.get<0>(), tuple.get<1>(), tuple.get<2>(), tuple.get<3>()); |
4555 | 2033 } |
2034 }; | |
2035 | |
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2036 Operations operations; |
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2037 operations.Apply(*this, target, resourceType, since, limit); |
4555 | 2038 } |
2039 } | |
4558 | 2040 |
2041 | |
2042 void ServerIndex::GetGlobalStatistics(/* out */ uint64_t& diskSize, | |
2043 /* out */ uint64_t& uncompressedSize, | |
2044 /* out */ uint64_t& countPatients, | |
2045 /* out */ uint64_t& countStudies, | |
2046 /* out */ uint64_t& countSeries, | |
2047 /* out */ uint64_t& countInstances) | |
2048 { | |
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2049 class Operations : public ReadOnlyOperationsT6<uint64_t&, uint64_t&, uint64_t&, uint64_t&, uint64_t&, uint64_t&> |
4558 | 2050 { |
2051 public: | |
2052 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2053 const Tuple& tuple) ORTHANC_OVERRIDE | |
2054 { | |
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2055 tuple.get<0>() = transaction.GetTotalCompressedSize(); |
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2056 tuple.get<1>() = transaction.GetTotalUncompressedSize(); |
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2057 tuple.get<2>() = transaction.GetResourceCount(ResourceType_Patient); |
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2058 tuple.get<3>() = transaction.GetResourceCount(ResourceType_Study); |
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2059 tuple.get<4>() = transaction.GetResourceCount(ResourceType_Series); |
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2060 tuple.get<5>() = transaction.GetResourceCount(ResourceType_Instance); |
4558 | 2061 } |
2062 }; | |
2063 | |
2064 Operations operations; | |
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2065 operations.Apply(*this, diskSize, uncompressedSize, countPatients, |
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2066 countStudies, countSeries, countInstances); |
4558 | 2067 } |
2068 | |
2069 | |
2070 void ServerIndex::GetChanges(Json::Value& target, | |
2071 int64_t since, | |
2072 unsigned int maxResults) | |
2073 { | |
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2074 class Operations : public ReadOnlyOperationsT3<Json::Value&, int64_t, unsigned int> |
4558 | 2075 { |
2076 public: | |
2077 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2078 const Tuple& tuple) ORTHANC_OVERRIDE | |
2079 { | |
2080 // NB: In Orthanc <= 1.3.2, a transaction was missing, as | |
2081 // "GetLastChange()" involves calls to "GetPublicId()" | |
2082 | |
2083 std::list<ServerIndexChange> changes; | |
2084 bool done; | |
2085 bool hasLast = false; | |
2086 int64_t last = 0; | |
2087 | |
2088 transaction.GetChanges(changes, done, tuple.get<1>(), tuple.get<2>()); | |
2089 if (changes.empty()) | |
2090 { | |
2091 last = transaction.GetLastChangeIndex(); | |
2092 hasLast = true; | |
2093 } | |
2094 | |
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2095 FormatLog(tuple.get<0>(), changes, "Changes", done, tuple.get<1>(), hasLast, last); |
4558 | 2096 } |
2097 }; | |
2098 | |
2099 Operations operations; | |
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2100 operations.Apply(*this, target, since, maxResults); |
4558 | 2101 } |
2102 | |
2103 | |
2104 void ServerIndex::GetLastChange(Json::Value& target) | |
2105 { | |
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2106 class Operations : public ReadOnlyOperationsT1<Json::Value&> |
4558 | 2107 { |
2108 public: | |
2109 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2110 const Tuple& tuple) ORTHANC_OVERRIDE | |
2111 { | |
2112 // NB: In Orthanc <= 1.3.2, a transaction was missing, as | |
2113 // "GetLastChange()" involves calls to "GetPublicId()" | |
2114 | |
2115 std::list<ServerIndexChange> changes; | |
2116 bool hasLast = false; | |
2117 int64_t last = 0; | |
2118 | |
2119 transaction.GetLastChange(changes); | |
2120 if (changes.empty()) | |
2121 { | |
2122 last = transaction.GetLastChangeIndex(); | |
2123 hasLast = true; | |
2124 } | |
2125 | |
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2126 FormatLog(tuple.get<0>(), changes, "Changes", true, 0, hasLast, last); |
4558 | 2127 } |
2128 }; | |
2129 | |
2130 Operations operations; | |
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2131 operations.Apply(*this, target); |
4558 | 2132 } |
2133 | |
2134 | |
2135 void ServerIndex::GetExportedResources(Json::Value& target, | |
2136 int64_t since, | |
2137 unsigned int maxResults) | |
2138 { | |
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2139 class Operations : public ReadOnlyOperationsT3<Json::Value&, int64_t, unsigned int> |
4558 | 2140 { |
2141 public: | |
2142 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2143 const Tuple& tuple) ORTHANC_OVERRIDE | |
2144 { | |
2145 // TODO - CANDIDATE FOR "TransactionType_SingleStatement" | |
2146 | |
2147 std::list<ExportedResource> exported; | |
2148 bool done; | |
2149 transaction.GetExportedResources(exported, done, tuple.get<1>(), tuple.get<2>()); | |
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2150 FormatLog(tuple.get<0>(), exported, "Exports", done, tuple.get<1>(), false, -1); |
4558 | 2151 } |
2152 }; | |
2153 | |
2154 Operations operations; | |
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2155 operations.Apply(*this, target, since, maxResults); |
4558 | 2156 } |
2157 | |
2158 | |
2159 void ServerIndex::GetLastExportedResource(Json::Value& target) | |
2160 { | |
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2161 class Operations : public ReadOnlyOperationsT1<Json::Value&> |
4558 | 2162 { |
2163 public: | |
2164 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2165 const Tuple& tuple) ORTHANC_OVERRIDE | |
2166 { | |
2167 // TODO - CANDIDATE FOR "TransactionType_SingleStatement" | |
2168 | |
2169 std::list<ExportedResource> exported; | |
2170 transaction.GetLastExportedResource(exported); | |
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2171 FormatLog(tuple.get<0>(), exported, "Exports", true, 0, false, -1); |
4558 | 2172 } |
2173 }; | |
2174 | |
2175 Operations operations; | |
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2176 operations.Apply(*this, target); |
4558 | 2177 } |
4559 | 2178 |
2179 | |
2180 bool ServerIndex::IsProtectedPatient(const std::string& publicId) | |
2181 { | |
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2182 class Operations : public ReadOnlyOperationsT2<bool&, const std::string&> |
4559 | 2183 { |
2184 public: | |
2185 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2186 const Tuple& tuple) ORTHANC_OVERRIDE | |
2187 { | |
2188 // Lookup for the requested resource | |
2189 int64_t id; | |
2190 ResourceType type; | |
4562 | 2191 if (!transaction.LookupResource(id, type, tuple.get<1>()) || |
4559 | 2192 type != ResourceType_Patient) |
2193 { | |
2194 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
2195 } | |
2196 else | |
2197 { | |
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2198 tuple.get<0>() = transaction.IsProtectedPatient(id); |
4559 | 2199 } |
2200 } | |
2201 }; | |
4562 | 2202 |
2203 bool isProtected; | |
4559 | 2204 Operations operations; |
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2205 operations.Apply(*this, isProtected, publicId); |
4562 | 2206 return isProtected; |
4559 | 2207 } |
2208 | |
2209 | |
2210 void ServerIndex::GetChildren(std::list<std::string>& result, | |
2211 const std::string& publicId) | |
2212 { | |
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2213 class Operations : public ReadOnlyOperationsT2<std::list<std::string>&, const std::string&> |
4559 | 2214 { |
2215 public: | |
2216 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2217 const Tuple& tuple) ORTHANC_OVERRIDE | |
2218 { | |
2219 ResourceType type; | |
2220 int64_t resource; | |
2221 if (!transaction.LookupResource(resource, type, tuple.get<1>())) | |
2222 { | |
2223 throw OrthancException(ErrorCode_UnknownResource); | |
2224 } | |
2225 else if (type == ResourceType_Instance) | |
2226 { | |
2227 // An instance cannot have a child | |
2228 throw OrthancException(ErrorCode_BadParameterType); | |
2229 } | |
2230 else | |
2231 { | |
2232 std::list<int64_t> tmp; | |
2233 transaction.GetChildrenInternalId(tmp, resource); | |
2234 | |
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2235 tuple.get<0>().clear(); |
4559 | 2236 |
2237 for (std::list<int64_t>::const_iterator | |
2238 it = tmp.begin(); it != tmp.end(); ++it) | |
2239 { | |
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2240 tuple.get<0>().push_back(transaction.GetPublicId(*it)); |
4559 | 2241 } |
2242 } | |
2243 } | |
2244 }; | |
2245 | |
2246 Operations operations; | |
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2247 operations.Apply(*this, result, publicId); |
4559 | 2248 } |
2249 | |
2250 | |
2251 void ServerIndex::GetChildInstances(std::list<std::string>& result, | |
2252 const std::string& publicId) | |
2253 { | |
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2254 class Operations : public ReadOnlyOperationsT2<std::list<std::string>&, const std::string&> |
4559 | 2255 { |
2256 public: | |
2257 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2258 const Tuple& tuple) ORTHANC_OVERRIDE | |
2259 { | |
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2260 tuple.get<0>().clear(); |
4559 | 2261 |
2262 ResourceType type; | |
2263 int64_t top; | |
2264 if (!transaction.LookupResource(top, type, tuple.get<1>())) | |
2265 { | |
2266 throw OrthancException(ErrorCode_UnknownResource); | |
2267 } | |
2268 else if (type == ResourceType_Instance) | |
2269 { | |
2270 // The resource is already an instance: Do not go down the hierarchy | |
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2271 tuple.get<0>().push_back(tuple.get<1>()); |
4559 | 2272 } |
2273 else | |
2274 { | |
2275 std::stack<int64_t> toExplore; | |
2276 toExplore.push(top); | |
2277 | |
2278 std::list<int64_t> tmp; | |
2279 while (!toExplore.empty()) | |
2280 { | |
2281 // Get the internal ID of the current resource | |
2282 int64_t resource = toExplore.top(); | |
2283 toExplore.pop(); | |
2284 | |
2285 // TODO - This could be optimized by seeing how many | |
2286 // levels "type == transaction.GetResourceType(top)" is | |
2287 // above the "instances level" | |
2288 if (transaction.GetResourceType(resource) == ResourceType_Instance) | |
2289 { | |
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2290 tuple.get<0>().push_back(transaction.GetPublicId(resource)); |
4559 | 2291 } |
2292 else | |
2293 { | |
2294 // Tag all the children of this resource as to be explored | |
2295 transaction.GetChildrenInternalId(tmp, resource); | |
2296 for (std::list<int64_t>::const_iterator | |
2297 it = tmp.begin(); it != tmp.end(); ++it) | |
2298 { | |
2299 toExplore.push(*it); | |
2300 } | |
2301 } | |
2302 } | |
2303 } | |
2304 } | |
2305 }; | |
2306 | |
2307 Operations operations; | |
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2308 operations.Apply(*this, result, publicId); |
4559 | 2309 } |
4560 | 2310 |
2311 | |
2312 bool ServerIndex::LookupMetadata(std::string& target, | |
2313 const std::string& publicId, | |
2314 ResourceType expectedType, | |
2315 MetadataType type) | |
2316 { | |
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2317 class Operations : public ReadOnlyOperationsT5<bool&, std::string&, const std::string&, ResourceType, MetadataType> |
4560 | 2318 { |
2319 public: | |
2320 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2321 const Tuple& tuple) ORTHANC_OVERRIDE | |
2322 { | |
2323 ResourceType rtype; | |
2324 int64_t id; | |
4562 | 2325 if (!transaction.LookupResource(id, rtype, tuple.get<2>()) || |
2326 rtype != tuple.get<3>()) | |
4560 | 2327 { |
2328 throw OrthancException(ErrorCode_UnknownResource); | |
2329 } | |
2330 else | |
2331 { | |
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2332 tuple.get<0>() = transaction.LookupMetadata(tuple.get<1>(), id, tuple.get<4>()); |
4560 | 2333 } |
2334 } | |
2335 }; | |
4562 | 2336 |
2337 bool found; | |
4560 | 2338 Operations operations; |
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2339 operations.Apply(*this, found, target, publicId, expectedType, type); |
4562 | 2340 return found; |
4560 | 2341 } |
2342 | |
2343 | |
2344 void ServerIndex::ListAvailableAttachments(std::set<FileContentType>& target, | |
2345 const std::string& publicId, | |
2346 ResourceType expectedType) | |
2347 { | |
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2348 class Operations : public ReadOnlyOperationsT3<std::set<FileContentType>&, const std::string&, ResourceType> |
4560 | 2349 { |
2350 public: | |
2351 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2352 const Tuple& tuple) ORTHANC_OVERRIDE | |
2353 { | |
2354 ResourceType type; | |
2355 int64_t id; | |
2356 if (!transaction.LookupResource(id, type, tuple.get<1>()) || | |
2357 tuple.get<2>() != type) | |
2358 { | |
2359 throw OrthancException(ErrorCode_UnknownResource); | |
2360 } | |
2361 else | |
2362 { | |
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2363 transaction.ListAvailableAttachments(tuple.get<0>(), id); |
4560 | 2364 } |
2365 } | |
2366 }; | |
2367 | |
2368 Operations operations; | |
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2369 operations.Apply(*this, target, publicId, expectedType); |
4560 | 2370 } |
2371 | |
2372 | |
2373 bool ServerIndex::LookupParent(std::string& target, | |
2374 const std::string& publicId) | |
2375 { | |
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2376 class Operations : public ReadOnlyOperationsT3<bool&, std::string&, const std::string&> |
4560 | 2377 { |
2378 public: | |
2379 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2380 const Tuple& tuple) ORTHANC_OVERRIDE | |
2381 { | |
2382 ResourceType type; | |
2383 int64_t id; | |
4562 | 2384 if (!transaction.LookupResource(id, type, tuple.get<2>())) |
4560 | 2385 { |
2386 throw OrthancException(ErrorCode_UnknownResource); | |
2387 } | |
2388 else | |
2389 { | |
2390 int64_t parentId; | |
2391 if (transaction.LookupParent(parentId, id)) | |
2392 { | |
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2393 tuple.get<1>() = transaction.GetPublicId(parentId); |
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2394 tuple.get<0>() = true; |
4562 | 2395 } |
2396 else | |
2397 { | |
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2398 tuple.get<0>() = false; |
4562 | 2399 } |
2400 } | |
2401 } | |
2402 }; | |
2403 | |
2404 bool found; | |
2405 Operations operations; | |
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2406 operations.Apply(*this, found, target, publicId); |
4562 | 2407 return found; |
2408 } | |
2409 | |
2410 | |
2411 void ServerIndex::GetResourceStatistics(/* out */ ResourceType& type, | |
2412 /* out */ uint64_t& diskSize, | |
2413 /* out */ uint64_t& uncompressedSize, | |
2414 /* out */ unsigned int& countStudies, | |
2415 /* out */ unsigned int& countSeries, | |
2416 /* out */ unsigned int& countInstances, | |
2417 /* out */ uint64_t& dicomDiskSize, | |
2418 /* out */ uint64_t& dicomUncompressedSize, | |
2419 const std::string& publicId) | |
2420 { | |
2421 class Operations : public ServerIndex::IReadOnlyOperations | |
2422 { | |
2423 private: | |
2424 ResourceType& type_; | |
2425 uint64_t& diskSize_; | |
2426 uint64_t& uncompressedSize_; | |
2427 unsigned int& countStudies_; | |
2428 unsigned int& countSeries_; | |
2429 unsigned int& countInstances_; | |
2430 uint64_t& dicomDiskSize_; | |
2431 uint64_t& dicomUncompressedSize_; | |
2432 const std::string& publicId_; | |
2433 | |
2434 public: | |
2435 explicit Operations(ResourceType& type, | |
2436 uint64_t& diskSize, | |
2437 uint64_t& uncompressedSize, | |
2438 unsigned int& countStudies, | |
2439 unsigned int& countSeries, | |
2440 unsigned int& countInstances, | |
2441 uint64_t& dicomDiskSize, | |
2442 uint64_t& dicomUncompressedSize, | |
2443 const std::string& publicId) : | |
2444 type_(type), | |
2445 diskSize_(diskSize), | |
2446 uncompressedSize_(uncompressedSize), | |
2447 countStudies_(countStudies), | |
2448 countSeries_(countSeries), | |
2449 countInstances_(countInstances), | |
2450 dicomDiskSize_(dicomDiskSize), | |
2451 dicomUncompressedSize_(dicomUncompressedSize), | |
2452 publicId_(publicId) | |
2453 { | |
2454 } | |
2455 | |
2456 virtual void Apply(ServerIndex::ReadOnlyTransaction& transaction) ORTHANC_OVERRIDE | |
2457 { | |
2458 int64_t top; | |
2459 if (!transaction.LookupResource(top, type_, publicId_)) | |
2460 { | |
2461 throw OrthancException(ErrorCode_UnknownResource); | |
2462 } | |
2463 else | |
2464 { | |
2465 countInstances_ = 0; | |
2466 countSeries_ = 0; | |
2467 countStudies_ = 0; | |
2468 diskSize_ = 0; | |
2469 uncompressedSize_ = 0; | |
2470 dicomDiskSize_ = 0; | |
2471 dicomUncompressedSize_ = 0; | |
2472 | |
2473 std::stack<int64_t> toExplore; | |
2474 toExplore.push(top); | |
2475 | |
2476 while (!toExplore.empty()) | |
2477 { | |
2478 // Get the internal ID of the current resource | |
2479 int64_t resource = toExplore.top(); | |
2480 toExplore.pop(); | |
2481 | |
2482 ResourceType thisType = transaction.GetResourceType(resource); | |
2483 | |
2484 std::set<FileContentType> f; | |
2485 transaction.ListAvailableAttachments(f, resource); | |
2486 | |
2487 for (std::set<FileContentType>::const_iterator | |
2488 it = f.begin(); it != f.end(); ++it) | |
2489 { | |
2490 FileInfo attachment; | |
2491 if (transaction.LookupAttachment(attachment, resource, *it)) | |
2492 { | |
2493 if (attachment.GetContentType() == FileContentType_Dicom) | |
2494 { | |
2495 dicomDiskSize_ += attachment.GetCompressedSize(); | |
2496 dicomUncompressedSize_ += attachment.GetUncompressedSize(); | |
2497 } | |
2498 | |
2499 diskSize_ += attachment.GetCompressedSize(); | |
2500 uncompressedSize_ += attachment.GetUncompressedSize(); | |
2501 } | |
2502 } | |
2503 | |
2504 if (thisType == ResourceType_Instance) | |
2505 { | |
2506 countInstances_++; | |
2507 } | |
2508 else | |
2509 { | |
2510 switch (thisType) | |
2511 { | |
2512 case ResourceType_Study: | |
2513 countStudies_++; | |
2514 break; | |
2515 | |
2516 case ResourceType_Series: | |
2517 countSeries_++; | |
2518 break; | |
2519 | |
2520 default: | |
2521 break; | |
2522 } | |
2523 | |
2524 // Tag all the children of this resource as to be explored | |
2525 std::list<int64_t> tmp; | |
2526 transaction.GetChildrenInternalId(tmp, resource); | |
2527 for (std::list<int64_t>::const_iterator | |
2528 it = tmp.begin(); it != tmp.end(); ++it) | |
2529 { | |
2530 toExplore.push(*it); | |
2531 } | |
2532 } | |
2533 } | |
2534 | |
2535 if (countStudies_ == 0) | |
2536 { | |
2537 countStudies_ = 1; | |
2538 } | |
2539 | |
2540 if (countSeries_ == 0) | |
2541 { | |
2542 countSeries_ = 1; | |
4560 | 2543 } |
2544 } | |
2545 } | |
2546 }; | |
4562 | 2547 |
2548 Operations operations(type, diskSize, uncompressedSize, countStudies, countSeries, | |
2549 countInstances, dicomDiskSize, dicomUncompressedSize, publicId); | |
2550 Apply(operations); | |
2551 } | |
2552 | |
2553 | |
2554 void ServerIndex::LookupIdentifierExact(std::vector<std::string>& result, | |
2555 ResourceType level, | |
2556 const DicomTag& tag, | |
2557 const std::string& value) | |
2558 { | |
2559 assert((level == ResourceType_Patient && tag == DICOM_TAG_PATIENT_ID) || | |
2560 (level == ResourceType_Study && tag == DICOM_TAG_STUDY_INSTANCE_UID) || | |
2561 (level == ResourceType_Study && tag == DICOM_TAG_ACCESSION_NUMBER) || | |
2562 (level == ResourceType_Series && tag == DICOM_TAG_SERIES_INSTANCE_UID) || | |
2563 (level == ResourceType_Instance && tag == DICOM_TAG_SOP_INSTANCE_UID)); | |
4560 | 2564 |
4562 | 2565 result.clear(); |
2566 | |
2567 DicomTagConstraint c(tag, ConstraintType_Equal, value, true, true); | |
2568 | |
2569 std::vector<DatabaseConstraint> query; | |
2570 query.push_back(c.ConvertToDatabaseConstraint(level, DicomTagType_Identifier)); | |
2571 | |
2572 | |
2573 class Operations : public ServerIndex::IReadOnlyOperations | |
2574 { | |
2575 private: | |
2576 std::vector<std::string>& result_; | |
2577 const std::vector<DatabaseConstraint>& query_; | |
2578 ResourceType level_; | |
2579 | |
2580 public: | |
2581 Operations(std::vector<std::string>& result, | |
2582 const std::vector<DatabaseConstraint>& query, | |
2583 ResourceType level) : | |
2584 result_(result), | |
2585 query_(query), | |
2586 level_(level) | |
2587 { | |
2588 } | |
2589 | |
2590 virtual void Apply(ReadOnlyTransaction& transaction) ORTHANC_OVERRIDE | |
2591 { | |
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2592 // TODO - CANDIDATE FOR "TransactionType_SingleStatement" |
4562 | 2593 std::list<std::string> tmp; |
2594 transaction.ApplyLookupResources(tmp, NULL, query_, level_, 0); | |
2595 CopyListToVector(result_, tmp); | |
2596 } | |
2597 }; | |
2598 | |
2599 Operations operations(result, query, level); | |
2600 Apply(operations); | |
2601 } | |
2602 | |
2603 | |
2604 bool ServerIndex::LookupGlobalProperty(std::string& value, | |
2605 GlobalProperty property) | |
2606 { | |
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2607 class Operations : public ReadOnlyOperationsT3<bool&, std::string&, GlobalProperty> |
4562 | 2608 { |
2609 public: | |
2610 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2611 const Tuple& tuple) ORTHANC_OVERRIDE | |
2612 { | |
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2613 // TODO - CANDIDATE FOR "TransactionType_SingleStatement" |
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2614 tuple.get<0>() = transaction.LookupGlobalProperty(tuple.get<1>(), tuple.get<2>()); |
4562 | 2615 } |
2616 }; | |
2617 | |
2618 bool found; | |
4560 | 2619 Operations operations; |
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2620 operations.Apply(*this, found, value, property); |
4562 | 2621 return found; |
2622 } | |
2623 | |
2624 | |
2625 std::string ServerIndex::GetGlobalProperty(GlobalProperty property, | |
2626 const std::string& defaultValue) | |
2627 { | |
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2628 std::string s; |
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2629 if (LookupGlobalProperty(s, property)) |
4562 | 2630 { |
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2631 return s; |
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2632 } |
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2633 else |
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2634 { |
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2635 return defaultValue; |
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2636 } |
4562 | 2637 } |
2638 | |
2639 | |
2640 bool ServerIndex::GetMainDicomTags(DicomMap& result, | |
2641 const std::string& publicId, | |
2642 ResourceType expectedType, | |
2643 ResourceType levelOfInterest) | |
2644 { | |
2645 // Yes, the following test could be shortened, but we wish to make it as clear as possible | |
2646 if (!(expectedType == ResourceType_Patient && levelOfInterest == ResourceType_Patient) && | |
2647 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Patient) && | |
2648 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Study) && | |
2649 !(expectedType == ResourceType_Series && levelOfInterest == ResourceType_Series) && | |
2650 !(expectedType == ResourceType_Instance && levelOfInterest == ResourceType_Instance)) | |
2651 { | |
2652 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
2653 } | |
2654 | |
2655 | |
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2656 class Operations : public ReadOnlyOperationsT5<bool&, DicomMap&, const std::string&, ResourceType, ResourceType> |
4562 | 2657 { |
2658 public: | |
2659 virtual void ApplyTuple(ReadOnlyTransaction& transaction, | |
2660 const Tuple& tuple) ORTHANC_OVERRIDE | |
2661 { | |
2662 // Lookup for the requested resource | |
2663 int64_t id; | |
2664 ResourceType type; | |
2665 if (!transaction.LookupResource(id, type, tuple.get<2>()) || | |
2666 type != tuple.get<3>()) | |
2667 { | |
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2668 tuple.get<0>() = false; |
4562 | 2669 } |
2670 else if (type == ResourceType_Study) | |
2671 { | |
2672 DicomMap tmp; | |
2673 transaction.GetMainDicomTags(tmp, id); | |
2674 | |
2675 switch (tuple.get<4>()) | |
2676 { | |
2677 case ResourceType_Patient: | |
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2678 tmp.ExtractPatientInformation(tuple.get<1>()); |
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2679 tuple.get<0>() = true; |
4562 | 2680 break; |
2681 | |
2682 case ResourceType_Study: | |
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2683 tmp.ExtractStudyInformation(tuple.get<1>()); |
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2684 tuple.get<0>() = true; |
4562 | 2685 break; |
2686 | |
2687 default: | |
2688 throw OrthancException(ErrorCode_InternalError); | |
2689 } | |
2690 } | |
2691 else | |
2692 { | |
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2693 transaction.GetMainDicomTags(tuple.get<1>(), id); |
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2694 tuple.get<0>() = true; |
4562 | 2695 } |
2696 } | |
2697 }; | |
2698 | |
2699 result.Clear(); | |
2700 | |
2701 bool found; | |
2702 Operations operations; | |
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2703 operations.Apply(*this, found, result, publicId, expectedType, levelOfInterest); |
4562 | 2704 return found; |
4560 | 2705 } |
4563
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2706 |
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2707 |
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2708 bool ServerIndex::GetAllMainDicomTags(DicomMap& result, |
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2709 const std::string& instancePublicId) |
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2710 { |
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2711 class Operations : public ReadOnlyOperationsT3<bool&, DicomMap&, const std::string&> |
4563
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2712 { |
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2713 public: |
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2714 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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2715 const Tuple& tuple) ORTHANC_OVERRIDE |
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2716 { |
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2717 // Lookup for the requested resource |
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2718 int64_t instance; |
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2719 ResourceType type; |
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2720 if (!transaction.LookupResource(instance, type, tuple.get<2>()) || |
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2721 type != ResourceType_Instance) |
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2722 { |
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2723 tuple.get<0>() = false; |
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2724 } |
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2725 else |
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2726 { |
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2727 DicomMap tmp; |
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2728 |
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2729 transaction.GetMainDicomTags(tmp, instance); |
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2730 tuple.get<1>().Merge(tmp); |
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2731 |
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2732 int64_t series; |
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2733 if (!transaction.LookupParent(series, instance)) |
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2734 { |
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2735 throw OrthancException(ErrorCode_InternalError); |
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2736 } |
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2737 |
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2738 tmp.Clear(); |
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2739 transaction.GetMainDicomTags(tmp, series); |
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2740 tuple.get<1>().Merge(tmp); |
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2741 |
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2742 int64_t study; |
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2743 if (!transaction.LookupParent(study, series)) |
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2744 { |
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2745 throw OrthancException(ErrorCode_InternalError); |
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2746 } |
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2747 |
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2748 tmp.Clear(); |
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2749 transaction.GetMainDicomTags(tmp, study); |
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2750 tuple.get<1>().Merge(tmp); |
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2751 |
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2752 #ifndef NDEBUG |
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2753 { |
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2754 // Sanity test to check that all the main DICOM tags from the |
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2755 // patient level are copied at the study level |
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2756 |
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2757 int64_t patient; |
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2758 if (!transaction.LookupParent(patient, study)) |
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2759 { |
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2760 throw OrthancException(ErrorCode_InternalError); |
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2761 } |
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2762 |
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2763 tmp.Clear(); |
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2764 transaction.GetMainDicomTags(tmp, study); |
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2765 |
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2766 std::set<DicomTag> patientTags; |
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2767 tmp.GetTags(patientTags); |
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2768 |
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2769 for (std::set<DicomTag>::const_iterator |
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2770 it = patientTags.begin(); it != patientTags.end(); ++it) |
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2771 { |
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|
2772 assert(tuple.get<1>().HasTag(*it)); |
4563
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2773 } |
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|
2774 } |
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end of refactoring read-only transactions
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|
2775 #endif |
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end of refactoring read-only transactions
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|
2776 |
4564
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changeset
|
2777 tuple.get<0>() = true; |
4563
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changeset
|
2778 } |
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|
2779 } |
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|
2780 }; |
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|
2781 |
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changeset
|
2782 result.Clear(); |
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2783 |
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end of refactoring read-only transactions
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|
2784 bool found; |
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|
2785 Operations operations; |
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|
2786 operations.Apply(*this, found, result, instancePublicId); |
4563
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|
2787 return found; |
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|
2788 } |
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|
2789 |
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2790 |
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changeset
|
2791 bool ServerIndex::LookupResourceType(ResourceType& type, |
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|
2792 const std::string& publicId) |
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|
2793 { |
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|
2794 class Operations : public ReadOnlyOperationsT3<bool&, ResourceType&, const std::string&> |
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|
2795 { |
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2796 public: |
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2797 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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2798 const Tuple& tuple) ORTHANC_OVERRIDE |
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2799 { |
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|
2800 // TODO - CANDIDATE FOR "TransactionType_SingleStatement" |
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|
2801 int64_t id; |
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2802 tuple.get<0>() = transaction.LookupResource(id, tuple.get<1>(), tuple.get<2>()); |
4563
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2803 } |
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2804 }; |
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2805 |
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|
2806 bool found; |
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2807 Operations operations; |
4564
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|
2808 operations.Apply(*this, found, type, publicId); |
4563
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2809 return found; |
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|
2810 } |
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|
2811 |
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|
2812 |
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end of refactoring read-only transactions
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|
2813 unsigned int ServerIndex::GetDatabaseVersion() |
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changeset
|
2814 { |
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|
2815 class Operations : public ReadOnlyOperationsT1<unsigned int&> |
4563
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|
2816 { |
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|
2817 public: |
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|
2818 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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|
2819 const Tuple& tuple) ORTHANC_OVERRIDE |
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|
2820 { |
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2821 // TODO - CANDIDATE FOR "TransactionType_SingleStatement" |
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2822 tuple.get<0>() = transaction.GetDatabaseVersion(); |
4563
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2823 } |
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|
2824 }; |
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|
2825 |
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|
2826 unsigned int version; |
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|
2827 Operations operations; |
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|
2828 operations.Apply(*this, version); |
4563
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|
2829 return version; |
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|
2830 } |
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|
2831 |
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|
2832 |
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changeset
|
2833 bool ServerIndex::LookupParent(std::string& target, |
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|
2834 const std::string& publicId, |
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|
2835 ResourceType parentType) |
bb1c365f9e44
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|
2836 { |
4564
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changeset
|
2837 class Operations : public ReadOnlyOperationsT4<bool&, std::string&, const std::string&, ResourceType> |
4563
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|
2838 { |
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|
2839 public: |
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changeset
|
2840 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
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changeset
|
2841 const Tuple& tuple) ORTHANC_OVERRIDE |
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|
2842 { |
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changeset
|
2843 ResourceType type; |
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changeset
|
2844 int64_t id; |
bb1c365f9e44
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changeset
|
2845 if (!transaction.LookupResource(id, type, tuple.get<2>())) |
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|
2846 { |
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changeset
|
2847 throw OrthancException(ErrorCode_UnknownResource); |
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|
2848 } |
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|
2849 |
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end of refactoring read-only transactions
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|
2850 while (type != tuple.get<3>()) |
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|
2851 { |
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|
2852 int64_t parentId; |
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|
2853 |
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changeset
|
2854 if (type == ResourceType_Patient || // Cannot further go up in hierarchy |
bb1c365f9e44
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|
2855 !transaction.LookupParent(parentId, id)) |
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|
2856 { |
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|
2857 tuple.get<0>() = false; |
4563
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|
2858 return; |
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|
2859 } |
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|
2860 |
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|
2861 id = parentId; |
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changeset
|
2862 type = GetParentResourceType(type); |
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changeset
|
2863 } |
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|
2864 |
4564
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changeset
|
2865 tuple.get<0>() = true; |
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|
2866 tuple.get<1>() = transaction.GetPublicId(id); |
4563
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|
2867 } |
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|
2868 }; |
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|
2869 |
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|
2870 bool found; |
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changeset
|
2871 Operations operations; |
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|
2872 operations.Apply(*this, found, target, publicId, parentType); |
4563
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changeset
|
2873 return found; |
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|
2874 } |
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|
2875 |
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changeset
|
2876 |
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changeset
|
2877 void ServerIndex::ApplyLookupResources(std::vector<std::string>& resourcesId, |
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changeset
|
2878 std::vector<std::string>* instancesId, |
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|
2879 const DatabaseLookup& lookup, |
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changeset
|
2880 ResourceType queryLevel, |
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|
2881 size_t limit) |
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changeset
|
2882 { |
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changeset
|
2883 class Operations : public ReadOnlyOperationsT4<bool, const std::vector<DatabaseConstraint>&, ResourceType, size_t> |
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diff
changeset
|
2884 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2885 private: |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2886 std::list<std::string> resourcesList_; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2887 std::list<std::string> instancesList_; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4562
diff
changeset
|
2888 |
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end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2889 public: |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2890 const std::list<std::string>& GetResourcesList() const |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
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4562
diff
changeset
|
2891 { |
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end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2892 return resourcesList_; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2893 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2894 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2895 const std::list<std::string>& GetInstancesList() const |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2896 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2897 return instancesList_; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2898 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2899 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2900 virtual void ApplyTuple(ReadOnlyTransaction& transaction, |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2901 const Tuple& tuple) ORTHANC_OVERRIDE |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2902 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2903 // TODO - CANDIDATE FOR "TransactionType_SingleStatement" |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2904 if (tuple.get<0>()) |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2905 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2906 transaction.ApplyLookupResources(resourcesList_, &instancesList_, tuple.get<1>(), tuple.get<2>(), tuple.get<3>()); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2907 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2908 else |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2909 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2910 transaction.ApplyLookupResources(resourcesList_, NULL, tuple.get<1>(), tuple.get<2>(), tuple.get<3>()); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2911 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2912 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2913 }; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2914 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2915 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2916 std::vector<DatabaseConstraint> normalized; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2917 NormalizeLookup(normalized, lookup, queryLevel); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2918 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2919 Operations operations; |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2920 operations.Apply(*this, (instancesId != NULL), normalized, queryLevel, limit); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2921 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2922 CopyListToVector(resourcesId, operations.GetResourcesList()); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2923 |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2924 if (instancesId != NULL) |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2925 { |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2926 CopyListToVector(*instancesId, operations.GetInstancesList()); |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2927 } |
bb1c365f9e44
end of refactoring read-only transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4562
diff
changeset
|
2928 } |
4565
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2929 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2930 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2931 bool ServerIndex::DeleteResource(Json::Value& target, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2932 const std::string& uuid, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2933 ResourceType expectedType) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2934 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2935 class Operations : public IReadWriteOperations |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2936 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2937 private: |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2938 bool found_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2939 Json::Value& target_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2940 const std::string& uuid_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2941 ResourceType expectedType_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2942 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2943 public: |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2944 Operations(Json::Value& target, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2945 const std::string& uuid, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2946 ResourceType expectedType) : |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2947 found_(false), |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2948 target_(target), |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2949 uuid_(uuid), |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2950 expectedType_(expectedType) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2951 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2952 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2953 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2954 bool IsFound() const |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2955 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2956 return found_; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2957 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2958 |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2959 virtual void Apply(ReadWriteTransaction& transaction, |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2960 Listener& listener) ORTHANC_OVERRIDE |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2961 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2962 int64_t id; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2963 ResourceType type; |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2964 if (!transaction.LookupResource(id, type, uuid_) || |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2965 expectedType_ != type) |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2966 { |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2967 found_ = false; |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2968 } |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2969 else |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2970 { |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2971 found_ = true; |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
2972 transaction.DeleteResource(id); |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2973 |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2974 if (listener.HasRemainingLevel()) |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2975 { |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2976 ResourceType remainingType = listener.GetRemainingType(); |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2977 const std::string& remainingUuid = listener.GetRemainingPublicId(); |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2978 |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2979 target_["RemainingAncestor"] = Json::Value(Json::objectValue); |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2980 target_["RemainingAncestor"]["Path"] = GetBasePath(remainingType, remainingUuid); |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2981 target_["RemainingAncestor"]["Type"] = EnumerationToString(remainingType); |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2982 target_["RemainingAncestor"]["ID"] = remainingUuid; |
3495a3d97ab6
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diff
changeset
|
2983 } |
3495a3d97ab6
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4564
diff
changeset
|
2984 else |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2985 { |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2986 target_["RemainingAncestor"] = Json::nullValue; |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2987 } |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2988 } |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
2989 } |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2990 }; |
3495a3d97ab6
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4564
diff
changeset
|
2991 |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2992 Operations operations(target, uuid, expectedType); |
3495a3d97ab6
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4564
diff
changeset
|
2993 Apply(operations); |
3495a3d97ab6
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diff
changeset
|
2994 return operations.IsFound(); |
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4564
diff
changeset
|
2995 } |
3495a3d97ab6
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diff
changeset
|
2996 |
3495a3d97ab6
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4564
diff
changeset
|
2997 |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2998 void ServerIndex::LogExportedResource(const std::string& publicId, |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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4564
diff
changeset
|
2999 const std::string& remoteModality) |
3495a3d97ab6
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4564
diff
changeset
|
3000 { |
3495a3d97ab6
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4564
diff
changeset
|
3001 class Operations : public IReadWriteOperations |
3495a3d97ab6
start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
3002 { |
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start of read-write transactions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
3003 private: |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
3004 const std::string& publicId_; |
3495a3d97ab6
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parents:
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|
3005 const std::string& remoteModality_; |
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parents:
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|
3006 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3007 public: |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
3008 Operations(const std::string& publicId, |
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|
3009 const std::string& remoteModality) : |
3495a3d97ab6
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|
3010 publicId_(publicId), |
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|
3011 remoteModality_(remoteModality) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
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|
3012 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3013 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3014 |
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|
3015 virtual void Apply(ReadWriteTransaction& transaction, |
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|
3016 Listener& listener) ORTHANC_OVERRIDE |
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|
3017 { |
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parents:
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|
3018 int64_t id; |
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|
3019 ResourceType type; |
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|
3020 if (!transaction.LookupResource(id, type, publicId_)) |
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4564
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changeset
|
3021 { |
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parents:
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|
3022 throw OrthancException(ErrorCode_InexistentItem); |
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|
3023 } |
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changeset
|
3024 |
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changeset
|
3025 std::string patientId; |
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|
3026 std::string studyInstanceUid; |
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|
3027 std::string seriesInstanceUid; |
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changeset
|
3028 std::string sopInstanceUid; |
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changeset
|
3029 |
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changeset
|
3030 int64_t currentId = id; |
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|
3031 ResourceType currentType = type; |
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|
3032 |
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changeset
|
3033 // Iteratively go up inside the patient/study/series/instance hierarchy |
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changeset
|
3034 bool done = false; |
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|
3035 while (!done) |
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diff
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|
3036 { |
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parents:
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diff
changeset
|
3037 DicomMap map; |
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|
3038 transaction.GetMainDicomTags(map, currentId); |
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changeset
|
3039 |
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changeset
|
3040 switch (currentType) |
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diff
changeset
|
3041 { |
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changeset
|
3042 case ResourceType_Patient: |
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changeset
|
3043 if (map.HasTag(DICOM_TAG_PATIENT_ID)) |
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parents:
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diff
changeset
|
3044 { |
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parents:
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changeset
|
3045 patientId = map.GetValue(DICOM_TAG_PATIENT_ID).GetContent(); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3046 } |
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diff
changeset
|
3047 done = true; |
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changeset
|
3048 break; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3049 |
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parents:
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changeset
|
3050 case ResourceType_Study: |
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parents:
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changeset
|
3051 if (map.HasTag(DICOM_TAG_STUDY_INSTANCE_UID)) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3052 { |
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changeset
|
3053 studyInstanceUid = map.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).GetContent(); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3054 } |
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parents:
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diff
changeset
|
3055 currentType = ResourceType_Patient; |
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changeset
|
3056 break; |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3057 |
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changeset
|
3058 case ResourceType_Series: |
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changeset
|
3059 if (map.HasTag(DICOM_TAG_SERIES_INSTANCE_UID)) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
3060 { |
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changeset
|
3061 seriesInstanceUid = map.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).GetContent(); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3062 } |
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changeset
|
3063 currentType = ResourceType_Study; |
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|
3064 break; |
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diff
changeset
|
3065 |
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changeset
|
3066 case ResourceType_Instance: |
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changeset
|
3067 if (map.HasTag(DICOM_TAG_SOP_INSTANCE_UID)) |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
3068 { |
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diff
changeset
|
3069 sopInstanceUid = map.GetValue(DICOM_TAG_SOP_INSTANCE_UID).GetContent(); |
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diff
changeset
|
3070 } |
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changeset
|
3071 currentType = ResourceType_Series; |
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changeset
|
3072 break; |
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diff
changeset
|
3073 |
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diff
changeset
|
3074 default: |
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parents:
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changeset
|
3075 throw OrthancException(ErrorCode_InternalError); |
3495a3d97ab6
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diff
changeset
|
3076 } |
3495a3d97ab6
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diff
changeset
|
3077 |
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changeset
|
3078 // If we have not reached the Patient level, find the parent of |
3495a3d97ab6
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changeset
|
3079 // the current resource |
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|
3080 if (!done) |
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diff
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|
3081 { |
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changeset
|
3082 bool ok = transaction.LookupParent(currentId, currentId); |
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changeset
|
3083 (void) ok; // Remove warning about unused variable in release builds |
3495a3d97ab6
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diff
changeset
|
3084 assert(ok); |
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parents:
4564
diff
changeset
|
3085 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3086 } |
3495a3d97ab6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4564
diff
changeset
|
3087 |
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changeset
|
3088 ExportedResource resource(-1, |
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|
3089 type, |
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|
3090 publicId_, |
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changeset
|
3091 remoteModality_, |
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diff
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|
3092 SystemToolbox::GetNowIsoString(true /* use UTC time (not local time) */), |
3495a3d97ab6
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diff
changeset
|
3093 patientId, |
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|
3094 studyInstanceUid, |
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diff
changeset
|
3095 seriesInstanceUid, |
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|
3096 sopInstanceUid); |
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diff
changeset
|
3097 |
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changeset
|
3098 transaction.LogExportedResource(resource); |
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4564
diff
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|
3099 } |
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diff
changeset
|
3100 }; |
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diff
changeset
|
3101 |
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|
3102 Operations operations(publicId, remoteModality); |
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|
3103 Apply(operations); |
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|
3104 } |
4567 | 3105 |
3106 | |
3107 void ServerIndex::SetProtectedPatient(const std::string& publicId, | |
3108 bool isProtected) | |
3109 { | |
3110 class Operations : public IReadWriteOperations | |
3111 { | |
3112 private: | |
3113 const std::string& publicId_; | |
3114 bool isProtected_; | |
3115 | |
3116 public: | |
3117 Operations(const std::string& publicId, | |
3118 bool isProtected) : | |
3119 publicId_(publicId), | |
3120 isProtected_(isProtected) | |
3121 { | |
3122 } | |
3123 | |
3124 virtual void Apply(ReadWriteTransaction& transaction, | |
3125 Listener& listener) ORTHANC_OVERRIDE | |
3126 { | |
3127 // Lookup for the requested resource | |
3128 int64_t id; | |
3129 ResourceType type; | |
3130 if (!transaction.LookupResource(id, type, publicId_) || | |
3131 type != ResourceType_Patient) | |
3132 { | |
3133 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
3134 } | |
3135 else | |
3136 { | |
3137 transaction.SetProtectedPatient(id, isProtected_); | |
3138 } | |
3139 } | |
3140 }; | |
3141 | |
3142 Operations operations(publicId, isProtected); | |
3143 Apply(operations); | |
3144 | |
3145 if (isProtected) | |
3146 { | |
3147 LOG(INFO) << "Patient " << publicId << " has been protected"; | |
3148 } | |
3149 else | |
3150 { | |
3151 LOG(INFO) << "Patient " << publicId << " has been unprotected"; | |
3152 } | |
3153 } | |
3154 | |
3155 | |
3156 void ServerIndex::SetMetadata(const std::string& publicId, | |
3157 MetadataType type, | |
3158 const std::string& value) | |
3159 { | |
3160 class Operations : public IReadWriteOperations | |
3161 { | |
3162 private: | |
3163 const std::string& publicId_; | |
3164 MetadataType type_; | |
3165 const std::string& value_; | |
3166 | |
3167 public: | |
3168 Operations(const std::string& publicId, | |
3169 MetadataType type, | |
3170 const std::string& value) : | |
3171 publicId_(publicId), | |
3172 type_(type), | |
3173 value_(value) | |
3174 { | |
3175 } | |
3176 | |
3177 virtual void Apply(ReadWriteTransaction& transaction, | |
3178 Listener& listener) ORTHANC_OVERRIDE | |
3179 { | |
3180 ResourceType rtype; | |
3181 int64_t id; | |
3182 if (!transaction.LookupResource(id, rtype, publicId_)) | |
3183 { | |
3184 throw OrthancException(ErrorCode_UnknownResource); | |
3185 } | |
3186 else | |
3187 { | |
3188 transaction.SetMetadata(id, type_, value_); | |
3189 | |
3190 if (IsUserMetadata(type_)) | |
3191 { | |
3192 transaction.LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId_); | |
3193 } | |
3194 } | |
3195 } | |
3196 }; | |
3197 | |
3198 Operations operations(publicId, type, value); | |
3199 Apply(operations); | |
3200 } | |
3201 | |
3202 | |
3203 void ServerIndex::DeleteMetadata(const std::string& publicId, | |
3204 MetadataType type) | |
3205 { | |
3206 class Operations : public IReadWriteOperations | |
3207 { | |
3208 private: | |
3209 const std::string& publicId_; | |
3210 MetadataType type_; | |
3211 | |
3212 public: | |
3213 Operations(const std::string& publicId, | |
3214 MetadataType type) : | |
3215 publicId_(publicId), | |
3216 type_(type) | |
3217 { | |
3218 } | |
3219 | |
3220 virtual void Apply(ReadWriteTransaction& transaction, | |
3221 Listener& listener) ORTHANC_OVERRIDE | |
3222 { | |
3223 ResourceType rtype; | |
3224 int64_t id; | |
3225 if (!transaction.LookupResource(id, rtype, publicId_)) | |
3226 { | |
3227 throw OrthancException(ErrorCode_UnknownResource); | |
3228 } | |
3229 else | |
3230 { | |
3231 transaction.DeleteMetadata(id, type_); | |
3232 | |
3233 if (IsUserMetadata(type_)) | |
3234 { | |
3235 transaction.LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId_); | |
3236 } | |
3237 } | |
3238 } | |
3239 }; | |
3240 | |
3241 Operations operations(publicId, type); | |
3242 Apply(operations); | |
3243 } | |
3244 | |
3245 | |
3246 uint64_t ServerIndex::IncrementGlobalSequence(GlobalProperty sequence) | |
3247 { | |
3248 class Operations : public IReadWriteOperations | |
3249 { | |
3250 private: | |
3251 uint64_t newValue_; | |
3252 GlobalProperty sequence_; | |
3253 | |
3254 public: | |
4569 | 3255 explicit Operations(GlobalProperty sequence) : |
3256 newValue_(0), // Dummy initialization | |
4567 | 3257 sequence_(sequence) |
3258 { | |
3259 } | |
3260 | |
3261 uint64_t GetNewValue() const | |
3262 { | |
3263 return newValue_; | |
3264 } | |
3265 | |
3266 virtual void Apply(ReadWriteTransaction& transaction, | |
3267 Listener& listener) ORTHANC_OVERRIDE | |
3268 { | |
3269 std::string oldString; | |
3270 | |
3271 if (transaction.LookupGlobalProperty(oldString, sequence_)) | |
3272 { | |
3273 uint64_t oldValue; | |
3274 | |
3275 try | |
3276 { | |
3277 oldValue = boost::lexical_cast<uint64_t>(oldString); | |
3278 } | |
3279 catch (boost::bad_lexical_cast&) | |
3280 { | |
3281 LOG(ERROR) << "Cannot read the global sequence " | |
3282 << boost::lexical_cast<std::string>(sequence_) << ", resetting it"; | |
3283 oldValue = 0; | |
3284 } | |
3285 | |
3286 newValue_ = oldValue + 1; | |
3287 } | |
3288 else | |
3289 { | |
3290 // Initialize the sequence at "1" | |
3291 newValue_ = 1; | |
3292 } | |
3293 | |
3294 transaction.SetGlobalProperty(sequence_, boost::lexical_cast<std::string>(newValue_)); | |
3295 } | |
3296 }; | |
3297 | |
3298 Operations operations(sequence); | |
3299 Apply(operations); | |
4569 | 3300 assert(operations.GetNewValue() != 0); |
4567 | 3301 return operations.GetNewValue(); |
3302 } | |
3303 | |
3304 | |
3305 void ServerIndex::DeleteChanges() | |
3306 { | |
3307 class Operations : public IReadWriteOperations | |
3308 { | |
3309 public: | |
3310 virtual void Apply(ReadWriteTransaction& transaction, | |
3311 Listener& listener) ORTHANC_OVERRIDE | |
3312 { | |
3313 transaction.ClearChanges(); | |
3314 } | |
3315 }; | |
3316 | |
3317 Operations operations; | |
3318 Apply(operations); | |
3319 } | |
3320 | |
3321 | |
3322 void ServerIndex::DeleteExportedResources() | |
3323 { | |
3324 class Operations : public IReadWriteOperations | |
3325 { | |
3326 public: | |
3327 virtual void Apply(ReadWriteTransaction& transaction, | |
3328 Listener& listener) ORTHANC_OVERRIDE | |
3329 { | |
3330 transaction.ClearExportedResources(); | |
3331 } | |
3332 }; | |
3333 | |
3334 Operations operations; | |
3335 Apply(operations); | |
3336 } | |
3337 | |
3338 | |
3339 void ServerIndex::SetGlobalProperty(GlobalProperty property, | |
3340 const std::string& value) | |
3341 { | |
3342 class Operations : public IReadWriteOperations | |
3343 { | |
3344 private: | |
3345 GlobalProperty property_; | |
3346 const std::string& value_; | |
3347 | |
3348 public: | |
3349 Operations(GlobalProperty property, | |
3350 const std::string& value) : | |
3351 property_(property), | |
3352 value_(value) | |
3353 { | |
3354 } | |
3355 | |
3356 virtual void Apply(ReadWriteTransaction& transaction, | |
3357 Listener& listener) ORTHANC_OVERRIDE | |
3358 { | |
3359 transaction.SetGlobalProperty(property_, value_); | |
3360 } | |
3361 }; | |
3362 | |
3363 Operations operations(property, value); | |
3364 Apply(operations); | |
3365 } | |
4568 | 3366 |
3367 | |
3368 void ServerIndex::DeleteAttachment(const std::string& publicId, | |
3369 FileContentType type) | |
3370 { | |
3371 class Operations : public IReadWriteOperations | |
3372 { | |
3373 private: | |
3374 const std::string& publicId_; | |
3375 FileContentType type_; | |
3376 | |
3377 public: | |
3378 Operations(const std::string& publicId, | |
3379 FileContentType type) : | |
3380 publicId_(publicId), | |
3381 type_(type) | |
3382 { | |
3383 } | |
3384 | |
3385 virtual void Apply(ReadWriteTransaction& transaction, | |
3386 Listener& listener) ORTHANC_OVERRIDE | |
3387 { | |
3388 ResourceType rtype; | |
3389 int64_t id; | |
3390 if (!transaction.LookupResource(id, rtype, publicId_)) | |
3391 { | |
3392 throw OrthancException(ErrorCode_UnknownResource); | |
3393 } | |
3394 else | |
3395 { | |
3396 transaction.DeleteAttachment(id, type_); | |
3397 | |
3398 if (IsUserContentType(type_)) | |
3399 { | |
3400 transaction.LogChange(id, ChangeType_UpdatedAttachment, rtype, publicId_); | |
3401 } | |
3402 } | |
3403 } | |
3404 }; | |
3405 | |
3406 Operations operations(publicId, type); | |
3407 Apply(operations); | |
3408 } | |
3409 | |
3410 | |
3411 void ServerIndex::LogChange(ChangeType changeType, | |
3412 const std::string& publicId) | |
3413 { | |
3414 class Operations : public IReadWriteOperations | |
3415 { | |
3416 private: | |
3417 ChangeType changeType_; | |
3418 const std::string& publicId_; | |
3419 | |
3420 public: | |
3421 Operations(ChangeType changeType, | |
3422 const std::string& publicId) : | |
3423 changeType_(changeType), | |
3424 publicId_(publicId) | |
3425 { | |
3426 } | |
3427 | |
3428 virtual void Apply(ReadWriteTransaction& transaction, | |
3429 Listener& listener) ORTHANC_OVERRIDE | |
3430 { | |
3431 int64_t id; | |
3432 ResourceType type; | |
3433 if (!transaction.LookupResource(id, type, publicId_)) | |
3434 { | |
3435 throw OrthancException(ErrorCode_UnknownResource); | |
3436 } | |
3437 else | |
3438 { | |
3439 transaction.LogChange(id, changeType_, type, publicId_); | |
3440 } | |
3441 } | |
3442 }; | |
3443 | |
3444 Operations operations(changeType, publicId); | |
3445 Apply(operations); | |
3446 } | |
0 | 3447 } |