Mercurial > hg > orthanc-stone
annotate Applications/Samples/SingleVolumeApplication.h @ 232:7d3b2c4f9ba1 am
don't cache hasUpdate_ since its not updated when we update the underlying hierarchy (i.e: when the child of a layout is a layout without child when it is added but childs are added later ...)
| author | am@osimis.io |
|---|---|
| date | Fri, 15 Jun 2018 11:23:04 +0200 |
| parents | 5412adf19980 |
| children | ce4405d98b92 ce48c3b3b0e9 |
| rev | line source |
|---|---|
| 0 | 1 /** |
| 2 * Stone of Orthanc | |
| 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
| 4 * Department, University Hospital of Liege, Belgium | |
|
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5 * Copyright (C) 2017-2018 Osimis S.A., Belgium |
| 0 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
| 47 | 8 * modify it under the terms of the GNU Affero General Public License |
| 9 * as published by the Free Software Foundation, either version 3 of | |
| 10 * the License, or (at your option) any later version. | |
| 0 | 11 * |
| 12 * This program is distributed in the hope that it will be useful, but | |
| 13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 47 | 14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
| 15 * Affero General Public License for more details. | |
| 16 * | |
| 17 * You should have received a copy of the GNU Affero General Public License | |
| 0 | 18 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
| 19 **/ | |
| 20 | |
| 21 | |
| 22 #pragma once | |
| 23 | |
| 102 | 24 #include "SampleApplicationBase.h" |
| 25 #include "../../Framework/dev.h" | |
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26 #include "../../Framework/Layers/ILayerSource.h" |
| 51 | 27 #include "../../Framework/Layers/LineMeasureTracker.h" |
| 28 #include "../../Framework/Layers/CircleMeasureTracker.h" | |
| 116 | 29 |
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30 #include <Core/Toolbox.h> |
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31 #include <Core/Logging.h> |
| 0 | 32 |
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33 #include <Plugins/Samples/Common/OrthancHttpConnection.h> // TODO REMOVE |
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34 #include "../../Framework/Layers/DicomStructureSetRendererFactory.h" // TODO REMOVE |
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35 #include "../../Framework/Toolbox/MessagingToolbox.h" // TODO REMOVE |
| 0 | 36 |
| 37 namespace OrthancStone | |
| 38 { | |
| 39 namespace Samples | |
| 40 { | |
| 41 class SingleVolumeApplication : public SampleApplicationBase | |
| 42 { | |
| 43 private: | |
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44 class Interactor : public VolumeImageInteractor |
| 0 | 45 { |
| 46 private: | |
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47 LayerWidget& widget_; |
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48 size_t layer_; |
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49 |
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50 protected: |
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51 virtual void NotifySliceChange(const ISlicedVolume& volume, |
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52 const size_t& sliceIndex, |
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53 const Slice& slice) |
| 0 | 54 { |
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55 const OrthancVolumeImage& image = dynamic_cast<const OrthancVolumeImage&>(volume); |
| 0 | 56 |
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57 RenderStyle s = widget_.GetLayerStyle(layer_); |
| 0 | 58 |
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59 if (image.FitWindowingToRange(s, slice.GetConverter())) |
| 0 | 60 { |
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61 //printf("Windowing: %f => %f\n", s.customWindowCenter_, s.customWindowWidth_); |
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62 widget_.SetLayerStyle(layer_, s); |
| 0 | 63 } |
| 64 } | |
| 65 | |
| 66 virtual void MouseOver(CairoContext& context, | |
| 67 WorldSceneWidget& widget, | |
| 68 const ViewportGeometry& view, | |
| 69 double x, | |
| 70 double y, | |
| 71 IStatusBar* statusBar) | |
| 72 { | |
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73 const LayerWidget& w = dynamic_cast<const LayerWidget&>(widget); |
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74 Vector p = w.GetSlice().MapSliceToWorldCoordinates(x, y); |
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75 printf("%f %f %f\n", p[0], p[1], p[2]); |
| 0 | 76 } |
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77 |
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78 public: |
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79 Interactor(OrthancVolumeImage& volume, |
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80 LayerWidget& widget, |
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81 VolumeProjection projection, |
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82 size_t layer) : |
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83 VolumeImageInteractor(volume, widget, projection), |
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84 widget_(widget), |
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85 layer_(layer) |
| 0 | 86 { |
| 87 } | |
| 88 }; | |
| 89 | |
| 90 | |
| 91 public: | |
| 92 virtual void DeclareCommandLineOptions(boost::program_options::options_description& options) | |
| 93 { | |
| 94 boost::program_options::options_description generic("Sample options"); | |
| 95 generic.add_options() | |
| 96 ("series", boost::program_options::value<std::string>(), | |
| 97 "Orthanc ID of the series") | |
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98 ("instance", boost::program_options::value<std::string>(), |
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99 "Orthanc ID of a multi-frame instance that describes a 3D volume") |
| 0 | 100 ("threads", boost::program_options::value<unsigned int>()->default_value(3), |
| 101 "Number of download threads") | |
| 102 ("projection", boost::program_options::value<std::string>()->default_value("axial"), | |
| 103 "Projection of interest (can be axial, sagittal or coronal)") | |
| 104 ("reverse", boost::program_options::value<bool>()->default_value(false), | |
| 105 "Reverse the normal direction of the volume") | |
| 106 ; | |
| 107 | |
| 108 options.add(generic); | |
| 109 } | |
| 110 | |
| 111 virtual void Initialize(BasicApplicationContext& context, | |
| 112 IStatusBar& statusBar, | |
| 113 const boost::program_options::variables_map& parameters) | |
| 114 { | |
| 115 using namespace OrthancStone; | |
| 116 | |
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117 if (parameters.count("series") > 1 || |
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118 parameters.count("instance") > 1) |
| 0 | 119 { |
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120 LOG(ERROR) << "Only one series or instance is allowed"; |
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121 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); |
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122 } |
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123 |
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124 if (parameters.count("series") == 1 && |
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125 parameters.count("instance") == 1) |
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126 { |
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127 LOG(ERROR) << "Cannot specify both a series and an instance"; |
| 0 | 128 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); |
| 129 } | |
| 130 | |
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131 std::string series; |
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132 if (parameters.count("series") == 1) |
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133 { |
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134 series = parameters["series"].as<std::string>(); |
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135 } |
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136 |
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137 std::string instance; |
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138 if (parameters.count("instance") == 1) |
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139 { |
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140 instance = parameters["instance"].as<std::string>(); |
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141 } |
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142 |
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143 if (series.empty() && |
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144 instance.empty()) |
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145 { |
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146 LOG(ERROR) << "The series ID or instance ID is missing"; |
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147 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); |
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148 } |
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149 |
| 0 | 150 unsigned int threads = parameters["threads"].as<unsigned int>(); |
| 151 bool reverse = parameters["reverse"].as<bool>(); | |
| 152 | |
| 153 std::string tmp = parameters["projection"].as<std::string>(); | |
| 154 Orthanc::Toolbox::ToLowerCase(tmp); | |
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155 |
| 0 | 156 VolumeProjection projection; |
| 157 if (tmp == "axial") | |
| 158 { | |
| 159 projection = VolumeProjection_Axial; | |
| 160 } | |
| 161 else if (tmp == "sagittal") | |
| 162 { | |
| 163 projection = VolumeProjection_Sagittal; | |
| 164 } | |
| 165 else if (tmp == "coronal") | |
| 166 { | |
| 167 projection = VolumeProjection_Coronal; | |
| 168 } | |
| 169 else | |
| 170 { | |
| 171 LOG(ERROR) << "Unknown projection: " << tmp; | |
| 172 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); | |
| 173 } | |
| 174 | |
| 102 | 175 std::auto_ptr<LayerWidget> widget(new LayerWidget); |
| 0 | 176 |
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177 #if 0 |
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178 std::auto_ptr<OrthancVolumeImage> volume(new OrthancVolumeImage(context.GetWebService(), true)); |
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179 if (series.empty()) |
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180 { |
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181 volume->ScheduleLoadInstance(instance); |
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182 } |
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183 else |
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184 { |
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185 volume->ScheduleLoadSeries(series); |
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186 } |
| 0 | 187 |
| 105 | 188 widget->AddLayer(new VolumeImageSource(*volume)); |
| 102 | 189 |
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190 context.AddInteractor(new Interactor(*volume, *widget, projection, 0)); |
| 130 | 191 context.AddSlicedVolume(volume.release()); |
| 0 | 192 |
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193 { |
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194 RenderStyle s; |
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195 s.alpha_ = 1; |
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196 s.applyLut_ = true; |
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197 s.lut_ = Orthanc::EmbeddedResources::COLORMAP_JET; |
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198 s.interpolation_ = ImageInterpolation_Bilinear; |
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199 widget->SetLayerStyle(0, s); |
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200 } |
| 102 | 201 #else |
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202 std::auto_ptr<OrthancVolumeImage> ct(new OrthancVolumeImage(context.GetWebService(), false)); |
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203 //ct->ScheduleLoadSeries("15a6f44a-ac7b88fe-19c462d9-dddd918e-b01550d8"); // 0178023P |
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204 //ct->ScheduleLoadSeries("dd069910-4f090474-7d2bba07-e5c10783-f9e4fb1d"); |
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205 //ct->ScheduleLoadSeries("a04ecf01-79b2fc33-58239f7e-ad9db983-28e81afa"); // IBA |
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206 //ct->ScheduleLoadSeries("03677739-1d8bca40-db1daf59-d74ff548-7f6fc9c0"); // 0522c0001 TCIA |
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207 ct->ScheduleLoadSeries("295e8a13-dfed1320-ba6aebb2-9a13e20f-1b3eb953"); // Captain |
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208 |
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209 std::auto_ptr<OrthancVolumeImage> pet(new OrthancVolumeImage(context.GetWebService(), true)); |
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210 //pet->ScheduleLoadSeries("48d2997f-8e25cd81-dd715b64-bd79cdcc-e8fcee53"); // 0178023P |
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211 //pet->ScheduleLoadSeries("aabad2e7-80702b5d-e599d26c-4f13398e-38d58a9e"); |
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212 //pet->ScheduleLoadInstance("830a69ff-8e4b5ee3-b7f966c8-bccc20fb-d322dceb"); // IBA 1 |
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213 //pet->ScheduleLoadInstance("337876a1-a68a9718-f15abccd-38faafa1-b99b496a"); // IBA 2 |
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214 //pet->ScheduleLoadInstance("830a69ff-8e4b5ee3-b7f966c8-bccc20fb-d322dceb"); // IBA 3 |
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215 //pet->ScheduleLoadInstance("269f26f4-0c83eeeb-2e67abbd-5467a40f-f1bec90c"); // 0522c0001 TCIA |
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216 pet->ScheduleLoadInstance("f080888c-0ab7528a-f7d9c28c-84980eb1-ff3b0ae6"); // Captain 1 |
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217 //pet->ScheduleLoadInstance("4f78055b-6499a2c5-1e089290-394acc05-3ec781c1"); // Captain 2 |
| 0 | 218 |
| 130 | 219 std::auto_ptr<StructureSetLoader> rtStruct(new StructureSetLoader(context.GetWebService())); |
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220 //rtStruct->ScheduleLoadInstance("c2ebc17b-6b3548db-5e5da170-b8ecab71-ea03add3"); // 0178023P |
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221 //rtStruct->ScheduleLoadInstance("54460695-ba3885ee-ddf61ac0-f028e31d-a6e474d9"); // IBA |
| 128 | 222 //rtStruct->ScheduleLoadInstance("17cd032b-ad92a438-ca05f06a-f9e96668-7e3e9e20"); // 0522c0001 TCIA |
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223 rtStruct->ScheduleLoadInstance("96c889ab-29fe5c54-dda6e66c-3949e4da-58f90d75"); // Captain |
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224 |
| 105 | 225 widget->AddLayer(new VolumeImageSource(*ct)); |
| 226 widget->AddLayer(new VolumeImageSource(*pet)); | |
| 130 | 227 widget->AddLayer(new DicomStructureSetRendererFactory(*rtStruct)); |
| 105 | 228 |
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229 context.AddInteractor(new Interactor(*pet, *widget, projection, 1)); |
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230 //context.AddInteractor(new VolumeImageInteractor(*ct, *widget, projection)); |
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231 |
| 130 | 232 context.AddSlicedVolume(ct.release()); |
| 233 context.AddSlicedVolume(pet.release()); | |
| 234 context.AddVolumeLoader(rtStruct.release()); | |
| 0 | 235 |
| 102 | 236 { |
| 237 RenderStyle s; | |
| 238 //s.drawGrid_ = true; | |
| 239 s.alpha_ = 1; | |
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240 s.windowing_ = ImageWindowing_Bone; |
| 102 | 241 widget->SetLayerStyle(0, s); |
| 242 } | |
| 243 | |
| 244 { | |
| 245 RenderStyle s; | |
| 246 //s.drawGrid_ = true; | |
| 247 s.SetColor(255, 0, 0); // Draw missing PET layer in red | |
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248 s.alpha_ = 0.5; |
| 102 | 249 s.applyLut_ = true; |
| 250 s.lut_ = Orthanc::EmbeddedResources::COLORMAP_JET; | |
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251 s.interpolation_ = ImageInterpolation_Bilinear; |
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252 s.windowing_ = ImageWindowing_Custom; |
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253 s.customWindowCenter_ = 0; |
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254 s.customWindowWidth_ = 128; |
| 102 | 255 widget->SetLayerStyle(1, s); |
| 256 } | |
| 257 #endif | |
| 258 | |
| 0 | 259 |
| 260 statusBar.SetMessage("Use the keys \"b\", \"l\" and \"d\" to change Hounsfield windowing"); | |
| 261 statusBar.SetMessage("Use the keys \"t\" to track the (X,Y,Z) mouse coordinates"); | |
| 262 statusBar.SetMessage("Use the keys \"m\" to measure distances"); | |
| 263 statusBar.SetMessage("Use the keys \"c\" to draw circles"); | |
| 102 | 264 |
| 265 widget->SetTransmitMouseOver(true); | |
| 266 context.SetCentralWidget(widget.release()); | |
| 0 | 267 } |
| 268 }; | |
| 269 } | |
| 270 } |