orthanc-stl: Sources/Plugin.cpp annotate

annotate Sources/Plugin.cpp @ 46:9b2a2fcc9878 nexus

added option to disable Nexus support

author	Sebastien Jodogne <s.jodogne@gmail.com>
date	Wed, 10 Apr 2024 07:49:45 +0200
parents	967f947014ac
children	a70fc4846be1

rev	line source
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	1 /**
24 dd0cd39e6259 update year to 2024 Sebastien Jodogne <s.jodogne@gmail.com> parents: 8 diff changeset	2 * SPDX-FileCopyrightText: 2023-2024 Sebastien Jodogne, UCLouvain, Belgium
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	3 * SPDX-License-Identifier: GPL-3.0-or-later
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	4 */
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	5
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	6 /**
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	7 * STL plugin for Orthanc
24 dd0cd39e6259 update year to 2024 Sebastien Jodogne <s.jodogne@gmail.com> parents: 8 diff changeset	8 * Copyright (C) 2023-2024 Sebastien Jodogne, UCLouvain, Belgium
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	9 *
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	10 * This program is free software: you can redistribute it and/or
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	11 * modify it under the terms of the GNU General Public License as
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	12 * published by the Free Software Foundation, either version 3 of the
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	13 * License, or (at your option) any later version.
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	14 *
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	15 * This program is distributed in the hope that it will be useful, but
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	16 * WITHOUT ANY WARRANTY; without even the implied warranty of
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	17 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	18 * General Public License for more details.
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	19 *
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	20 * You should have received a copy of the GNU General Public License
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	21 * along with this program. If not, see <http://www.gnu.org/licenses/>.
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	22 **/
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	23
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	24
46 9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	25 #if !defined(ORTHANC_ENABLE_NEXUS)
9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	26 # error Macro ORTHANC_ENABLE_NEXUS must be defined
9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	27 #endif
9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	28
35 ee3bc8f7df5b reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 34 diff changeset	29 #include "StructureSetGeometry.h"
34 bee2017f3088 fix Sebastien Jodogne <s.jodogne@gmail.com> parents: 33 diff changeset	30 #include "STLToolbox.h"
32 976da5476810 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 31 diff changeset	31 #include "VTKToolbox.h"
40 8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	32
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	33 #include <EmbeddedResources.h>
32 976da5476810 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 31 diff changeset	34
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	35 #include "../Resources/Orthanc/Plugins/OrthancPluginCppWrapper.h"
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	36
4 5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	37 #include <DicomParsing/FromDcmtkBridge.h>
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	38 #include <Images/ImageProcessing.h>
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	39 #include <Logging.h>
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	40 #include <SerializationToolbox.h>
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	41 #include <SystemToolbox.h>
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	42
33 2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	43 #include <vtkNew.h>
2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	44
36 13698d34e059 preparing to include O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 35 diff changeset	45 #include <boost/algorithm/string.hpp>
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	46 #include <boost/thread/shared_mutex.hpp>
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	47
46 9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	48
9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	49 #if ORTHANC_ENABLE_NEXUS == 1
9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	50 # include <Cache/MemoryStringCache.h>
9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	51 #endif
9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	52
25 5fc3ea6acbd5 fix deprecated calls Sebastien Jodogne <s.jodogne@gmail.com> parents: 24 diff changeset	53 #define ORTHANC_PLUGIN_NAME "stl"
5fc3ea6acbd5 fix deprecated calls Sebastien Jodogne <s.jodogne@gmail.com> parents: 24 diff changeset	54
6 c02d12eb34d4 added LoadNifti() Sebastien Jodogne <s.jodogne@gmail.com> parents: 4 diff changeset	55
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	56 // Forward declaration
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	57 void ReadStaticAsset(std::string& target,
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	58 const std::string& path);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	59
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	60
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	61 /**
38 970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	62 * As the static assets are gzipped by the "EmbedStaticAssets.py"
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	63 * script, we use a cache to maintain the uncompressed assets in order
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	64 * to avoid multiple gzip decodings.
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	65 **/
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	66 class ResourcesCache : public boost::noncopyable
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	67 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	68 private:
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	69 typedef std::map<std::string, std::string*> Content;
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	70
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	71 boost::shared_mutex mutex_;
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	72 Content content_;
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	73
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	74 public:
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	75 ~ResourcesCache()
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	76 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	77 for (Content::iterator it = content_.begin(); it != content_.end(); ++it)
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	78 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	79 assert(it->second != NULL);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	80 delete it->second;
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	81 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	82 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	83
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	84 void Answer(OrthancPluginRestOutput* output,
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	85 const std::string& path)
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	86 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	87 const std::string mime = Orthanc::EnumerationToString(Orthanc::SystemToolbox::AutodetectMimeType(path));
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	88
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	89 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	90 // Check whether the cache already contains the resource
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	91 boost::shared_lock<boost::shared_mutex> lock(mutex_);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	92
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	93 Content::const_iterator found = content_.find(path);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	94
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	95 if (found != content_.end())
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	96 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	97 assert(found->second != NULL);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	98 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, found->second->c_str(), found->second->size(), mime.c_str());
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	99 return;
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	100 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	101 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	102
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	103 // This resource has not been cached yet
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	104
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	105 std::unique_ptr<std::string> item(new std::string);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	106 ReadStaticAsset(*item, path);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	107 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, item->c_str(), item->size(), mime.c_str());
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	108
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	109 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	110 // Store the resource into the cache
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	111 boost::unique_lock<boost::shared_mutex> lock(mutex_);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	112
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	113 if (content_.find(path) == content_.end())
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	114 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	115 content_[path] = item.release();
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	116 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	117 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	118 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	119 };
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	120
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	121
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	122 static ResourcesCache cache_;
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	123 static bool hasCreateDicomStl_;
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	124
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	125 void ServeFile(OrthancPluginRestOutput* output,
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	126 const char* url,
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	127 const OrthancPluginHttpRequest* request)
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	128 {
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	129 if (request->method != OrthancPluginHttpMethod_Get)
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	130 {
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	131 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "GET");
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	132 return;
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	133 }
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	134
45 967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	135 const std::string file = request->groups[0];
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	136
38 970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	137 if (boost::starts_with(file, "libs/"))
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	138 {
36 13698d34e059 preparing to include O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 35 diff changeset	139 cache_.Answer(output, file.substr(5));
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	140 }
38 970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	141 else
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	142 {
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	143 Orthanc::EmbeddedResources::FileResourceId resourceId;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	144 Orthanc::MimeType mimeType;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	145
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	146 if (file == "three.html")
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	147 {
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	148 resourceId = Orthanc::EmbeddedResources::THREE_HTML;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	149 mimeType = Orthanc::MimeType_Html;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	150 }
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	151 else if (file == "three.js")
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	152 {
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	153 resourceId = Orthanc::EmbeddedResources::THREE_JS;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	154 mimeType = Orthanc::MimeType_JavaScript;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	155 }
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	156 else if (file == "o3dv.html")
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	157 {
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	158 resourceId = Orthanc::EmbeddedResources::O3DV_HTML;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	159 mimeType = Orthanc::MimeType_Html;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	160 }
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	161 else if (file == "o3dv.js")
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	162 {
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	163 resourceId = Orthanc::EmbeddedResources::O3DV_JS;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	164 mimeType = Orthanc::MimeType_JavaScript;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	165 }
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	166 else
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	167 {
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	168 OrthancPluginSendHttpStatusCode(OrthancPlugins::GetGlobalContext(), output, 404);
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	169 return;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	170 }
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	171
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	172 std::string s;
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	173 Orthanc::EmbeddedResources::GetFileResource(s, resourceId);
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	174 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), Orthanc::EnumerationToString(mimeType));
970994058acd building O3DV Sebastien Jodogne <s.jodogne@gmail.com> parents: 36 diff changeset	175 }
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	176 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	177
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	178
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	179
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	180
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	181 #include <dcmtk/dcmdata/dcfilefo.h>
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	182 #include <dcmtk/dcmdata/dcsequen.h>
29 62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	183 #include <dcmtk/dcmdata/dcuid.h>
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	184
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	185
40 8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	186 namespace
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	187 {
40 8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	188 class XorFiller : public Orthanc::ImageProcessing::IPolygonFiller
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	189 {
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	190 private:
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	191 Orthanc::ImageAccessor& target_;
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	192
40 8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	193 public:
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	194 explicit XorFiller(Orthanc::ImageAccessor& target) :
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	195 target_(target)
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	196 {
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	197 }
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	198
40 8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	199 virtual void Fill(int y,
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	200 int x1,
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	201 int x2) ORTHANC_OVERRIDE
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	202 {
40 8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	203 assert(x1 <= x2);
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	204
40 8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	205 if (y >= 0 &&
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	206 y < static_cast<int>(target_.GetHeight()))
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	207 {
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	208 x1 = std::max(x1, 0);
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	209 x2 = std::min(x2, static_cast<int>(target_.GetWidth()) - 1);
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	210
40 8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	211 uint8_t* p = reinterpret_cast<uint8_t*>(target_.GetRow(y)) + x1;
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	212
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	213 for (int i = x1; i <= x2; i++, p++)
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	214 {
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	215 p = (p ^ 0xff);
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	216 }
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	217 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	218 }
40 8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	219 };
8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	220 }
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	221
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	222
29 62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	223 static Orthanc::ParsedDicomFile* LoadInstance(const std::string& instanceId)
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	224 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	225 std::string dicom;
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	226
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	227 if (!OrthancPlugins::RestApiGetString(dicom, "/instances/" + instanceId + "/file", false))
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	228 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	229 throw Orthanc::OrthancException(Orthanc::ErrorCode_UnknownResource);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	230 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	231 else
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	232 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	233 return new Orthanc::ParsedDicomFile(dicom);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	234 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	235 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	236
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	237
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	238 static void GetReferencedVolumeAxes(Vector3D& axisX,
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	239 Vector3D& axisY,
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	240 const StructureSet& structureSet)
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	241 {
29 62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	242 // This is a rough guess for the X/Y axes
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	243 axisX = Vector3D(1, 0, 0);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	244 axisY = Vector3D(0, 1, 0);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	245
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	246 // Look for one instance from the referenced volume
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	247 const std::string& sopInstanceUid = structureSet.GetPolygon(0).GetReferencedSopInstanceUid();
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	248
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	249 Json::Value response;
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	250 if (OrthancPlugins::RestApiPost(response, "/tools/lookup", sopInstanceUid, false))
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	251 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	252 if (response.type() != Json::arrayValue)
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	253 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	254 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	255 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	256
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	257 bool first = true;
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	258
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	259 for (Json::Value::ArrayIndex i = 0; i < response.size(); i++)
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	260 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	261 if (response[i].type() != Json::objectValue)
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	262 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	263 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	264 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	265
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	266 if (Orthanc::SerializationToolbox::ReadString(response[i], "Type") == "Instance")
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	267 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	268 if (first)
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	269 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	270 const std::string& instanceId = Orthanc::SerializationToolbox::ReadString(response[i], "ID");
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	271 std::unique_ptr<Orthanc::ParsedDicomFile> reference(LoadInstance(instanceId));
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	272
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	273 std::string imageOrientation;
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	274 if (reference->GetTagValue(imageOrientation, Orthanc::DICOM_TAG_IMAGE_ORIENTATION_PATIENT))
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	275 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	276 std::vector<std::string> items;
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	277 Orthanc::Toolbox::TokenizeString(items, imageOrientation, '\\');
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	278
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	279 double x1, x2, x3, y1, y2, y3;
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	280
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	281 if (items.size() == 6 &&
33 2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	282 STLToolbox::MyParseDouble(x1, items[0]) &&
2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	283 STLToolbox::MyParseDouble(x2, items[1]) &&
2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	284 STLToolbox::MyParseDouble(x3, items[2]) &&
2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	285 STLToolbox::MyParseDouble(y1, items[3]) &&
2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	286 STLToolbox::MyParseDouble(y2, items[4]) &&
2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	287 STLToolbox::MyParseDouble(y3, items[5]))
29 62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	288 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	289 axisX = Vector3D(x1, x2, x3);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	290 axisY = Vector3D(y1, y2, y3);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	291 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	292 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	293 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	294 else
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	295 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	296 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError,
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	297 "Multiple instances with the same SOP Instance UID");
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	298 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	299 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	300 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	301 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	302 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	303
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	304
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	305 static bool EncodeStructureSetMesh(std::string& stl,
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	306 const StructureSet& structureSet,
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	307 const StructureSetGeometry& geometry,
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	308 const std::set<std::string>& roiNames,
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	309 unsigned int resolution,
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	310 bool smooth)
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	311 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	312 if (resolution < 1 \|\|
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	313 structureSet.GetPolygonsCount() < 1)
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	314 {
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	315 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	316 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	317
33 2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	318 if (!STLToolbox::IsNear(1, geometry.GetSlicesNormal().ComputeNorm()))
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	319 {
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	320 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	321 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	322
29 62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	323 Vector3D axisX, axisY;
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	324 GetReferencedVolumeAxes(axisX, axisY, structureSet);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	325
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	326 Vector3D axisZ = Vector3D::CrossProduct(axisX, axisY);
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	327
33 2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	328 if (!STLToolbox::IsNear(1, axisX.ComputeNorm()) \|\|
2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	329 !STLToolbox::IsNear(1, axisY.ComputeNorm()) \|\|
29 62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	330 !Vector3D::AreParallel(axisZ, geometry.GetSlicesNormal()))
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	331 {
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	332 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	333 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	334
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	335 Extent2D extent;
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	336 for (size_t i = 0; i < structureSet.GetPolygonsCount(); i++)
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	337 {
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	338 structureSet.GetPolygon(i).Add(extent, axisX, axisY);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	339 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	340
28 410003c50b17 improved computation of RT-STRUCT geometry Sebastien Jodogne <s.jodogne@gmail.com> parents: 25 diff changeset	341 const int depth = geometry.GetSlicesCount();
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	342
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	343 vtkNew<vtkImageData> volume;
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	344 volume->SetDimensions(resolution, resolution, depth);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	345 volume->AllocateScalars(VTK_UNSIGNED_CHAR, 1);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	346
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	347 assert(sizeof(unsigned char) == 1);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	348 memset(volume->GetScalarPointer(), 0, resolution * resolution * depth);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	349
30 3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	350 const double pixelSpacingX = extent.GetWidth() / static_cast<double>(resolution);
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	351 const double pixelSpacingY = extent.GetHeight() / static_cast<double>(resolution);
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	352 const double pixelSpacingZ = geometry.GetSlicesSpacing();
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	353
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	354 bool first = true;
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	355
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	356 for (size_t i = 0; i < structureSet.GetPolygonsCount(); i++)
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	357 {
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	358 const StructurePolygon& polygon = structureSet.GetPolygon(i);
29 62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	359 if (roiNames.find(polygon.GetRoiName()) != roiNames.end())
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	360 {
29 62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	361 // This polygon corresponds to a ROI of interest
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	362
29 62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	363 size_t z;
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	364 if (geometry.LookupSliceIndex(z, polygon))
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	365 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	366 std::vector<Orthanc::ImageProcessing::ImagePoint> points;
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	367 points.reserve(polygon.GetPointsCount());
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	368
29 62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	369 for (size_t j = 0; j < polygon.GetPointsCount(); j++)
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	370 {
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	371 const Vector3D& point = polygon.GetPoint(j);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	372 double x = (Vector3D::DotProduct(point, axisX) - extent.GetMinX()) / extent.GetWidth() * static_cast<double>(resolution);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	373 double y = (Vector3D::DotProduct(point, axisY) - extent.GetMinY()) / extent.GetHeight() * static_cast<double>(resolution);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	374 points.push_back(Orthanc::ImageProcessing::ImagePoint(static_cast<int32_t>(std::floor(x)),
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	375 static_cast<int32_t>(std::floor(y))));
30 3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	376
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	377 if (first)
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	378 {
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	379 first = false;
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	380 volume->SetOrigin(point.GetX() - x * pixelSpacingX,
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	381 point.GetY() - y * pixelSpacingY,
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	382 point.GetZ() - z * pixelSpacingZ);
3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	383 }
29 62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	384 }
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	385
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	386 Orthanc::ImageAccessor slice;
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	387 slice.AssignWritable(Orthanc::PixelFormat_Grayscale8, resolution, resolution, resolution /* pitch */,
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	388 reinterpret_cast<uint8_t>(volume->GetScalarPointer()) + z resolution * resolution);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	389
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	390 XorFiller filler(slice);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	391 Orthanc::ImageProcessing::FillPolygon(filler, points);
62abf3c523f9 big endian support, retrieve axes from referenced volume Sebastien Jodogne <s.jodogne@gmail.com> parents: 28 diff changeset	392 }
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	393 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	394 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	395
30 3570c23764d4 set stl origin Sebastien Jodogne <s.jodogne@gmail.com> parents: 29 diff changeset	396 volume->SetSpacing(pixelSpacingX, pixelSpacingY, pixelSpacingZ);
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	397
32 976da5476810 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 31 diff changeset	398 return VTKToolbox::EncodeVolume(stl, volume.Get(), resolution, smooth);
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	399 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	400
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	401
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	402 void ListStructures(OrthancPluginRestOutput* output,
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	403 const char* url,
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	404 const OrthancPluginHttpRequest* request)
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	405 {
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	406 if (request->method != OrthancPluginHttpMethod_Get)
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	407 {
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	408 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "GET");
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	409 return;
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	410 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	411
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	412 const std::string instanceId(request->groups[0]);
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	413
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	414 std::unique_ptr<Orthanc::ParsedDicomFile> dicom(LoadInstance(instanceId));
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	415
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	416 std::set<std::string> names;
33 2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	417 StructureSet::ListStructuresNames(names, *dicom);
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	418
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	419 Json::Value answer = Json::arrayValue;
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	420
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	421 for (std::set<std::string>::const_iterator it = names.begin(); it != names.end(); ++it)
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	422 {
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	423 answer.append(*it);
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	424 }
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	425
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	426 std::string s = answer.toStyledString();
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	427 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), Orthanc::MIME_JSON);
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	428 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	429
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	430
4 5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	431 static void AddDefaultTagValue(Json::Value& target,
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	432 const Orthanc::DicomTag& tag,
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	433 const std::string& value)
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	434 {
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	435 if (!target.isMember(tag.Format()))
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	436 {
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	437 target[tag.Format()] = value;
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	438 }
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	439 }
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	440
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	441
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	442 static void AddDefaultTagValue(Json::Value& target,
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	443 const DcmTagKey& tag,
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	444 const std::string& value)
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	445 {
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	446 AddDefaultTagValue(target, Orthanc::DicomTag(tag.getGroup(), tag.getElement()), value);
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	447 }
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	448
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	449
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	450 static void CallCreateDicom(Json::Value& answer,
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	451 const std::string& stl,
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	452 const Json::Value& body,
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	453 const std::string& parentStudy,
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	454 const std::string& defaultSeriesDescription,
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	455 const std::string& defaultFrameOfReferenceUid,
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	456 const std::string& defaultTitle)
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	457 {
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	458 static const char* const KEY_TAGS = "Tags";
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	459
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	460 Json::Value normalized = Json::objectValue;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	461
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	462 if (body.isMember(KEY_TAGS))
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	463 {
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	464 const Json::Value& tags = body[KEY_TAGS];
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	465
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	466 if (tags.type() != Json::objectValue)
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	467 {
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	468 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest, "Tags must be provided as a JSON object");
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	469 }
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	470
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	471 std::vector<std::string> keys = tags.getMemberNames();
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	472 for (size_t i = 0; i < keys.size(); i++)
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	473 {
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	474 const Orthanc::DicomTag tag = Orthanc::FromDcmtkBridge::ParseTag(keys[i]);
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	475 normalized[tag.Format()] = tags[keys[i]];
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	476 }
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	477 }
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	478
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	479 if (!normalized.isMember(Orthanc::DICOM_TAG_SERIES_DESCRIPTION.Format()))
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	480 {
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	481 normalized[Orthanc::DICOM_TAG_SERIES_DESCRIPTION.Format()] = defaultSeriesDescription;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	482 }
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	483
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	484 AddDefaultTagValue(normalized, Orthanc::DICOM_TAG_SERIES_NUMBER, "1");
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	485 AddDefaultTagValue(normalized, Orthanc::DICOM_TAG_FRAME_OF_REFERENCE_UID, defaultFrameOfReferenceUid);
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	486 AddDefaultTagValue(normalized, Orthanc::DICOM_TAG_INSTANCE_NUMBER, "1");
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	487
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	488 AddDefaultTagValue(normalized, DCM_BurnedInAnnotation, "NO");
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	489 AddDefaultTagValue(normalized, DCM_DeviceSerialNumber, ORTHANC_STL_VERSION);
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	490 AddDefaultTagValue(normalized, DCM_DocumentTitle, defaultTitle);
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	491 AddDefaultTagValue(normalized, DCM_Manufacturer, "Orthanc STL plugin");
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	492 AddDefaultTagValue(normalized, DCM_ManufacturerModelName, "Orthanc STL plugin");
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	493 AddDefaultTagValue(normalized, DCM_PositionReferenceIndicator, "");
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	494 AddDefaultTagValue(normalized, DCM_SoftwareVersions, ORTHANC_STL_VERSION);
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	495 AddDefaultTagValue(normalized, DCM_ConceptNameCodeSequence, "");
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	496
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	497 std::string date, time;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	498 Orthanc::SystemToolbox::GetNowDicom(date, time, true /* use UTC time (not local time) */);
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	499 AddDefaultTagValue(normalized, DCM_AcquisitionDateTime, date + time);
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	500
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	501 const Orthanc::DicomTag MEASUREMENT_UNITS_CODE_SEQUENCE(DCM_MeasurementUnitsCodeSequence.getGroup(),
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	502 DCM_MeasurementUnitsCodeSequence.getElement());
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	503
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	504 if (!normalized.isMember(MEASUREMENT_UNITS_CODE_SEQUENCE.Format()))
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	505 {
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	506 Json::Value item;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	507 item["CodeValue"] = "mm";
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	508 item["CodingSchemeDesignator"] = "UCUM";
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	509 item["CodeMeaning"] = defaultTitle;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	510
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	511 normalized[MEASUREMENT_UNITS_CODE_SEQUENCE.Format()].append(item);
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	512 }
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	513
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	514 std::string content;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	515 Orthanc::Toolbox::EncodeDataUriScheme(content, Orthanc::MIME_STL, stl);
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	516
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	517 Json::Value create;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	518 create["Content"] = content;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	519 create["Parent"] = parentStudy;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	520 create["Tags"] = normalized;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	521
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	522 if (!OrthancPlugins::RestApiPost(answer, "/tools/create-dicom", create.toStyledString(), false))
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	523 {
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	524 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest, "Cannot create DICOM from STL");
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	525 }
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	526 }
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	527
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	528
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	529 void EncodeStructureSet(OrthancPluginRestOutput* output,
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	530 const char* url,
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	531 const OrthancPluginHttpRequest* request)
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	532 {
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	533 static const char* const KEY_INSTANCE = "Instance";
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	534 static const char* const KEY_RESOLUTION = "Resolution";
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	535 static const char* const KEY_ROI_NAMES = "RoiNames";
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	536 static const char* const KEY_SMOOTH = "Smooth";
28 410003c50b17 improved computation of RT-STRUCT geometry Sebastien Jodogne <s.jodogne@gmail.com> parents: 25 diff changeset	537 static const char* const KEY_STRICT = "Strict";
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	538
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	539 if (request->method != OrthancPluginHttpMethod_Post)
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	540 {
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	541 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "POST");
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	542 return;
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	543 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	544
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	545 Json::Value body;
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	546 if (!Orthanc::Toolbox::ReadJson(body, request->body, request->bodySize))
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	547 {
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	548 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	549 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	550
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	551 const std::string instanceId = Orthanc::SerializationToolbox::ReadString(body, KEY_INSTANCE);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	552 const bool smooth = (body.isMember(KEY_SMOOTH) ?
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	553 Orthanc::SerializationToolbox::ReadBoolean(body, KEY_SMOOTH) :
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	554 true /* smooth by default */);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	555 const unsigned int resolution = (body.isMember(KEY_RESOLUTION) ?
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	556 Orthanc::SerializationToolbox::ReadUnsignedInteger(body, KEY_RESOLUTION) :
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	557 256 /* default value */);
28 410003c50b17 improved computation of RT-STRUCT geometry Sebastien Jodogne <s.jodogne@gmail.com> parents: 25 diff changeset	558 const bool strict = (body.isMember(KEY_STRICT) ?
410003c50b17 improved computation of RT-STRUCT geometry Sebastien Jodogne <s.jodogne@gmail.com> parents: 25 diff changeset	559 Orthanc::SerializationToolbox::ReadBoolean(body, KEY_STRICT) :
410003c50b17 improved computation of RT-STRUCT geometry Sebastien Jodogne <s.jodogne@gmail.com> parents: 25 diff changeset	560 true /* strict by default */);
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	561
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	562 std::set<std::string> roiNames;
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	563 Orthanc::SerializationToolbox::ReadSetOfStrings(roiNames, body, KEY_ROI_NAMES);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	564
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	565 std::unique_ptr<Orthanc::ParsedDicomFile> dicom(LoadInstance(instanceId));
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	566
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	567 StructureSet structureSet(*dicom);
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	568
28 410003c50b17 improved computation of RT-STRUCT geometry Sebastien Jodogne <s.jodogne@gmail.com> parents: 25 diff changeset	569 StructureSetGeometry geometry(structureSet, strict);
410003c50b17 improved computation of RT-STRUCT geometry Sebastien Jodogne <s.jodogne@gmail.com> parents: 25 diff changeset	570
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	571 std::string stl;
28 410003c50b17 improved computation of RT-STRUCT geometry Sebastien Jodogne <s.jodogne@gmail.com> parents: 25 diff changeset	572 if (!EncodeStructureSetMesh(stl, structureSet, geometry, roiNames, resolution, smooth))
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	573 {
8 d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	574 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat, "Cannot encode STL from RT-STRUCT");
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	575 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	576 else
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	577 {
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	578 std::string seriesDescription;
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	579
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	580 if (dicom->GetTagValue(seriesDescription, Orthanc::DICOM_TAG_SERIES_DESCRIPTION))
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	581 {
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	582 seriesDescription += ": ";
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	583 }
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	584 else
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	585 {
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	586 seriesDescription.clear();
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	587 }
4 5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	588
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	589 bool first = true;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	590 for (std::set<std::string>::const_iterator it = roiNames.begin(); it != roiNames.end(); ++it)
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	591 {
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	592 if (first)
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	593 {
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	594 first = false;
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	595 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	596 else
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	597 {
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	598 seriesDescription += ", ";
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	599 }
2 2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	600
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	601 seriesDescription += *it;
4 5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	602 }
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	603
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	604 std::string frameOfReferenceUid;
4 5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	605 if (structureSet.HasFrameOfReferenceUid())
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	606 {
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	607 frameOfReferenceUid = structureSet.GetFrameOfReferenceUid();
4 5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	608 }
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	609 else
5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	610 {
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	611 frameOfReferenceUid = Orthanc::FromDcmtkBridge::GenerateUniqueIdentifier(Orthanc::ResourceType_Instance);
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	612 }
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	613
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	614 Json::Value answer;
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	615 CallCreateDicom(answer, stl, body, structureSet.HashStudy(), seriesDescription,
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	616 frameOfReferenceUid, "STL model generated from DICOM RT-STRUCT");
4 5ee4448a8ff8 generated STL pass dciodvfy Sebastien Jodogne <s.jodogne@gmail.com> parents: 3 diff changeset	617
7 e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	618 std::string s = answer.toStyledString();
e3e59de705f6 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 6 diff changeset	619 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), Orthanc::MIME_JSON);
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	620 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	621 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	622
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	623
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	624 void ExtractStl(OrthancPluginRestOutput* output,
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	625 const char* url,
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	626 const OrthancPluginHttpRequest* request)
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	627 {
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	628 if (request->method != OrthancPluginHttpMethod_Get)
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	629 {
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	630 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "GET");
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	631 return;
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	632 }
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	633
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	634 const std::string instanceId(request->groups[0]);
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	635
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	636 std::unique_ptr<Orthanc::ParsedDicomFile> dicom(LoadInstance(instanceId));
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	637 DcmDataset& dataset = *dicom->GetDcmtkObject().getDataset();
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	638
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	639 std::string stl;
33 2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	640 if (STLToolbox::GetStringValue(dataset, DCM_MIMETypeOfEncapsulatedDocument) != Orthanc::MIME_STL \|\|
2460b376d3f7 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 32 diff changeset	641 STLToolbox::GetStringValue(dataset, DCM_SOPClassUID) != UID_EncapsulatedSTLStorage \|\|
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	642 !dicom->GetTagValue(stl, Orthanc::DICOM_TAG_ENCAPSULATED_DOCUMENT))
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	643 {
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	644 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest, "DICOM instance not encapsulating a STL model: " + instanceId);
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	645 }
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	646 else
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	647 {
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	648 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output,
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	649 stl.empty() ? NULL : stl.c_str(), stl.size(), Orthanc::MIME_STL);
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	650 }
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	651 }
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	652
0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	653
6 c02d12eb34d4 added LoadNifti() Sebastien Jodogne <s.jodogne@gmail.com> parents: 4 diff changeset	654
8 d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	655 void EncodeNifti(OrthancPluginRestOutput* output,
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	656 const char* url,
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	657 const OrthancPluginHttpRequest* request)
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	658 {
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	659 static const char* const KEY_NIFTI = "Nifti";
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	660 static const char* const KEY_RESOLUTION = "Resolution";
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	661 static const char* const KEY_PARENT_STUDY = "ParentStudy";
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	662 static const char* const KEY_SMOOTH = "Smooth";
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	663
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	664 if (request->method != OrthancPluginHttpMethod_Post)
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	665 {
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	666 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "POST");
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	667 return;
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	668 }
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	669
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	670 Json::Value body;
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	671 if (!Orthanc::Toolbox::ReadJson(body, request->body, request->bodySize))
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	672 {
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	673 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest);
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	674 }
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	675
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	676 std::string mime, nifti;
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	677 if (!Orthanc::Toolbox::DecodeDataUriScheme(mime, nifti, Orthanc::SerializationToolbox::ReadString(body, KEY_NIFTI)))
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	678 {
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	679 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadRequest, "Missing the \"Nifti\" argument containing the NIfTI file");
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	680 }
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	681
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	682 const std::string parentStudy = Orthanc::SerializationToolbox::ReadString(body, KEY_PARENT_STUDY);
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	683 const bool smooth = (body.isMember(KEY_SMOOTH) ?
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	684 Orthanc::SerializationToolbox::ReadBoolean(body, KEY_SMOOTH) :
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	685 true /* smooth by default */);
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	686 const unsigned int resolution = (body.isMember(KEY_RESOLUTION) ?
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	687 Orthanc::SerializationToolbox::ReadUnsignedInteger(body, KEY_RESOLUTION) :
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	688 256 /* default value */);
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	689
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	690 vtkNew<vtkImageData> volume;
32 976da5476810 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 31 diff changeset	691 VTKToolbox::LoadNifti(volume.Get(), nifti);
8 d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	692
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	693 std::string stl;
32 976da5476810 reorganization Sebastien Jodogne <s.jodogne@gmail.com> parents: 31 diff changeset	694 if (!VTKToolbox::EncodeVolume(stl, volume.Get(), resolution, smooth))
8 d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	695 {
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	696 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat, "Cannot encode STL from NIfTI");
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	697 }
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	698 else
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	699 {
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	700 const std::string title = "STL model generated from NIfTI";
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	701
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	702 const std::string frameOfReferenceUid = Orthanc::FromDcmtkBridge::GenerateUniqueIdentifier(Orthanc::ResourceType_Instance);
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	703
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	704 Json::Value answer;
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	705 CallCreateDicom(answer, stl, body, parentStudy, title, frameOfReferenceUid, title);
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	706
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	707 std::string s = answer.toStyledString();
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	708 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), Orthanc::MIME_JSON);
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	709 }
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	710 }
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	711
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	712
46 9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	713 #if ORTHANC_ENABLE_NEXUS == 1
9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	714
45 967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	715 void ServeNexusAssets(OrthancPluginRestOutput* output,
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	716 const char* url,
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	717 const OrthancPluginHttpRequest* request)
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	718 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	719 if (request->method != OrthancPluginHttpMethod_Get)
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	720 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	721 OrthancPluginSendMethodNotAllowed(OrthancPlugins::GetGlobalContext(), output, "GET");
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	722 return;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	723 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	724
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	725 const std::string file = request->groups[0];
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	726
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	727 Orthanc::EmbeddedResources::FileResourceId resourceId;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	728 Orthanc::MimeType mimeType;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	729
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	730 if (file == "threejs.html")
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	731 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	732 resourceId = Orthanc::EmbeddedResources::NEXUS_HTML;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	733 mimeType = Orthanc::MimeType_Html;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	734 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	735 else if (file == "js/meco.js")
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	736 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	737 resourceId = Orthanc::EmbeddedResources::NEXUS_MECO_JS;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	738 mimeType = Orthanc::MimeType_JavaScript;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	739 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	740 else if (file == "js/nexus.js")
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	741 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	742 resourceId = Orthanc::EmbeddedResources::NEXUS_JS;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	743 mimeType = Orthanc::MimeType_JavaScript;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	744 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	745 else if (file == "js/nexus_three.js")
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	746 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	747 resourceId = Orthanc::EmbeddedResources::NEXUS_THREE_JS;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	748 mimeType = Orthanc::MimeType_JavaScript;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	749 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	750 else if (file == "js/TrackballControls.js")
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	751 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	752 resourceId = Orthanc::EmbeddedResources::NEXUS_TRACKBALL_JS;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	753 mimeType = Orthanc::MimeType_JavaScript;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	754 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	755 else
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	756 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	757 OrthancPluginSendHttpStatusCode(OrthancPlugins::GetGlobalContext(), output, 404);
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	758 return;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	759 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	760
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	761 std::string s;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	762 Orthanc::EmbeddedResources::GetFileResource(s, resourceId);
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	763 OrthancPluginAnswerBuffer(OrthancPlugins::GetGlobalContext(), output, s.c_str(), s.size(), Orthanc::EnumerationToString(mimeType));
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	764 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	765
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	766
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	767 static Orthanc::MemoryStringCache nexusCache_;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	768
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	769 void ExtractNexusModel(OrthancPluginRestOutput* output,
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	770 const char* url,
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	771 const OrthancPluginHttpRequest* request)
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	772 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	773 OrthancPluginContext* context = OrthancPlugins::GetGlobalContext();
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	774
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	775 if (request->method != OrthancPluginHttpMethod_Get)
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	776 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	777 OrthancPluginSendMethodNotAllowed(context, output, "GET");
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	778 return;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	779 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	780
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	781 const std::string instanceId = request->groups[0];
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	782
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	783 std::string range;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	784
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	785 for (uint32_t i = 0; i < request->headersCount; i++)
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	786 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	787 if (std::string(request->headersKeys[i]) == "range")
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	788 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	789 range = request->headersValues[i];
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	790 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	791 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	792
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	793 static const std::string BYTES = "bytes=";
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	794
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	795 if (!boost::starts_with(range, BYTES))
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	796 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	797 OrthancPluginSendHttpStatusCode(context, output, 416); // Range not satisfiable
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	798 return;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	799 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	800
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	801 std::vector<std::string> tokens;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	802 Orthanc::Toolbox::TokenizeString(tokens, range.substr(BYTES.length()), '-');
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	803
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	804 uint64_t start, end;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	805
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	806 if (tokens.size() != 2 \|\|
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	807 !Orthanc::SerializationToolbox::ParseUnsignedInteger64(start, tokens[0]) \|\|
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	808 !Orthanc::SerializationToolbox::ParseUnsignedInteger64(end, tokens[1]) \|\|
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	809 start < 0 \|\|
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	810 start > end)
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	811 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	812 OrthancPluginSendHttpStatusCode(context, output, 416); // Range not satisfiable
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	813 return;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	814 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	815
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	816 uint64_t modelSize;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	817 std::string part;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	818
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	819 #if 0
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	820 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	821 // Use no cache
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	822 std::string model;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	823 if (!OrthancPlugins::RestApiGetString(model, "/instances/" + instanceId + "/content/4205-1001", false))
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	824 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	825 OrthancPluginSendHttpStatusCode(context, output, 404);
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	826 return;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	827 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	828
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	829 modelSize = model.size();
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	830
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	831 if (end >= modelSize)
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	832 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	833 OrthancPluginSendHttpStatusCode(context, output, 416); // Range not satisfiable
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	834 return;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	835 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	836
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	837 part = model.substr(start, end - start + 1);
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	838 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	839 #else
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	840 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	841 Orthanc::MemoryStringCache::Accessor accessor(nexusCache_);
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	842
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	843 std::string model;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	844 if (!accessor.Fetch(model, instanceId))
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	845 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	846 if (OrthancPlugins::RestApiGetString(model, "/instances/" + instanceId + "/content/4205-1001", false))
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	847 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	848 accessor.Add(instanceId, model);
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	849 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	850 else
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	851 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	852 OrthancPluginSendHttpStatusCode(context, output, 404);
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	853 return;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	854 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	855 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	856
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	857 modelSize = model.size();
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	858
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	859 if (end >= modelSize)
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	860 {
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	861 OrthancPluginSendHttpStatusCode(context, output, 416); // Range not satisfiable
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	862 return;
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	863 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	864
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	865 part = model.substr(start, end - start + 1);
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	866 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	867 #endif
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	868
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	869 std::string s = ("bytes " + boost::lexical_cast<std::string>(start) + "-" +
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	870 boost::lexical_cast<std::string>(end) + "/" +
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	871 boost::lexical_cast<std::string>(modelSize));
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	872 OrthancPluginSetHttpHeader(context, output, "Content-Range", s.c_str());
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	873
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	874 s = boost::lexical_cast<std::string>(part.size());
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	875 OrthancPluginSetHttpHeader(context, output, "Content-Length", s.c_str());
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	876 OrthancPluginSetHttpHeader(context, output, "Content-Type", "application/octet-stream");
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	877
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	878 OrthancPluginSendHttpStatus(context, output, 206 /* partial content */, part.c_str(), part.size());
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	879 }
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	880
46 9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	881 #endif
9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	882
45 967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	883
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	884 extern "C"
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	885 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	886 ORTHANC_PLUGINS_API int32_t OrthancPluginInitialize(OrthancPluginContext* context)
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	887 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	888 OrthancPlugins::SetGlobalContext(context);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	889
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	890 /* Check the version of the Orthanc core */
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	891 if (OrthancPluginCheckVersion(OrthancPlugins::GetGlobalContext()) == 0)
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	892 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	893 char info[1024];
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	894 sprintf(info, "Your version of Orthanc (%s) must be above %d.%d.%d to run this plugin",
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	895 OrthancPlugins::GetGlobalContext()->orthancVersion,
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	896 ORTHANC_PLUGINS_MINIMAL_MAJOR_NUMBER,
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	897 ORTHANC_PLUGINS_MINIMAL_MINOR_NUMBER,
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	898 ORTHANC_PLUGINS_MINIMAL_REVISION_NUMBER);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	899 OrthancPluginLogError(OrthancPlugins::GetGlobalContext(), info);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	900 return -1;
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	901 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	902
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	903 #if ORTHANC_FRAMEWORK_VERSION_IS_ABOVE(1, 7, 2)
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	904 Orthanc::Logging::InitializePluginContext(context);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	905 #else
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	906 Orthanc::Logging::Initialize(context);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	907 #endif
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	908
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	909 Orthanc::InitializeFramework("", false);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	910
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	911 hasCreateDicomStl_ = OrthancPlugins::CheckMinimalOrthancVersion(1, 12, 1);
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	912
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	913 if (!hasCreateDicomStl_)
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	914 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	915 LOG(WARNING) << "Your version of Orthanc (" << std::string(context->orthancVersion)
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	916 << ") is insufficient to create DICOM STL, it should be above 1.12.1";
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	917 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	918
25 5fc3ea6acbd5 fix deprecated calls Sebastien Jodogne <s.jodogne@gmail.com> parents: 24 diff changeset	919 OrthancPlugins::SetDescription(ORTHANC_PLUGIN_NAME, "STL plugin for Orthanc.");
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	920
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	921 OrthancPlugins::RegisterRestCallback<ServeFile>("/stl/app/(.*)", true);
3 0fb06c6a6c87 added route "/instances/{id}/stl" Sebastien Jodogne <s.jodogne@gmail.com> parents: 2 diff changeset	922 OrthancPlugins::RegisterRestCallback<ExtractStl>("/instances/([0-9a-f-]+)/stl", true);
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	923 OrthancPlugins::RegisterRestCallback<ListStructures>("/stl/rt-struct/([0-9a-f-]+)", true);
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	924
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	925 if (hasCreateDicomStl_)
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	926 {
8 d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	927 OrthancPlugins::RegisterRestCallback<EncodeStructureSet>("/stl/encode-rtstruct", true);
d1267c6c33e1 added route /stl/encode-nifti Sebastien Jodogne <s.jodogne@gmail.com> parents: 7 diff changeset	928 OrthancPlugins::RegisterRestCallback<EncodeNifti>("/stl/encode-nifti", true);
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	929 }
0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	930
46 9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	931 #if ORTHANC_ENABLE_NEXUS == 1
45 967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	932 nexusCache_.SetMaximumSize(512 * 1024 * 1024); // Cache of 512MB for Nexus
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	933 OrthancPlugins::RegisterRestCallback<ExtractNexusModel>("/instances/([0-9a-f-]+)/nexus", true);
967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	934 OrthancPlugins::RegisterRestCallback<ServeNexusAssets>("/stl/nexus/(.*)", true);
46 9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	935 #endif
45 967f947014ac adding experimental support for nexus models Sebastien Jodogne <s.jodogne@gmail.com> parents: 40 diff changeset	936
31 ab231760799d added button to import STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 30 diff changeset	937 OrthancPlugins::OrthancConfiguration globalConfiguration;
ab231760799d added button to import STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 30 diff changeset	938 OrthancPlugins::OrthancConfiguration configuration;
ab231760799d added button to import STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 30 diff changeset	939 globalConfiguration.GetSection(configuration, "STL");
ab231760799d added button to import STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 30 diff changeset	940
2 2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	941 // Extend the default Orthanc Explorer with custom JavaScript for STL
2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	942 std::string explorer;
2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	943
2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	944 {
2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	945 Orthanc::EmbeddedResources::GetFileResource(explorer, Orthanc::EmbeddedResources::ORTHANC_EXPLORER);
2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	946
2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	947 std::map<std::string, std::string> dictionary;
2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	948 dictionary["HAS_CREATE_DICOM_STL"] = (hasCreateDicomStl_ ? "true" : "false");
40 8a1daa321afe cppcheck Sebastien Jodogne <s.jodogne@gmail.com> parents: 38 diff changeset	949 dictionary["SHOW_NIFTI_BUTTON"] = (configuration.GetBooleanValue("EnableNIfTI", false) ? "true" : "false");
46 9b2a2fcc9878 added option to disable Nexus support Sebastien Jodogne <s.jodogne@gmail.com> parents: 45 diff changeset	950 dictionary["IS_NEXUS_ENABLED"] = (ORTHANC_ENABLE_NEXUS == 1 ? "true" : "false");
2 2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	951 explorer = Orthanc::Toolbox::SubstituteVariables(explorer, dictionary);
2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	952
25 5fc3ea6acbd5 fix deprecated calls Sebastien Jodogne <s.jodogne@gmail.com> parents: 24 diff changeset	953 OrthancPlugins::ExtendOrthancExplorer(ORTHANC_PLUGIN_NAME, explorer);
2 2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	954 }
2bdb9acb7dcf added STL viewer button at instance level too Sebastien Jodogne <s.jodogne@gmail.com> parents: 1 diff changeset	955
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	956 return 0;
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	957 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	958
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	959
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	960 ORTHANC_PLUGINS_API void OrthancPluginFinalize()
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	961 {
1 0f03a8a0bd6f encoding of RT-STRUCT as STL Sebastien Jodogne <s.jodogne@gmail.com> parents: 0 diff changeset	962 Orthanc::FinalizeFramework();
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	963 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	964
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	965
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	966 ORTHANC_PLUGINS_API const char* OrthancPluginGetName()
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	967 {
25 5fc3ea6acbd5 fix deprecated calls Sebastien Jodogne <s.jodogne@gmail.com> parents: 24 diff changeset	968 return ORTHANC_PLUGIN_NAME;
0 4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	969 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	970
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	971
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	972 ORTHANC_PLUGINS_API const char* OrthancPluginGetVersion()
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	973 {
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	974 return ORTHANC_STL_VERSION;
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	975 }
4e889a8e8be2 initial commit of the viewer plugin Sebastien Jodogne <s.jodogne@gmail.com> parents: diff changeset	976 }

Mercurial > hg > orthanc-stl

annotate Sources/Plugin.cpp @ 46:9b2a2fcc9878 nexus