Mercurial > hg > orthanc
annotate OrthancServer/OrthancRestApi/OrthancRestModalities.cpp @ 784:efd0215736d9
start of anonymization refactoring
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Fri, 02 May 2014 15:06:31 +0200 |
parents | be87dd517416 |
children | d466b3606aca |
rev | line source |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege, |
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4 * Belgium |
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5 * |
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6 * This program is free software: you can redistribute it and/or |
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7 * modify it under the terms of the GNU General Public License as |
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8 * published by the Free Software Foundation, either version 3 of the |
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9 * License, or (at your option) any later version. |
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10 * |
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11 * In addition, as a special exception, the copyright holders of this |
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12 * program give permission to link the code of its release with the |
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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14 * that use the same license as the "OpenSSL" library), and distribute |
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15 * the linked executables. You must obey the GNU General Public License |
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16 * in all respects for all of the code used other than "OpenSSL". If you |
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17 * modify file(s) with this exception, you may extend this exception to |
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18 * your version of the file(s), but you are not obligated to do so. If |
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19 * you do not wish to do so, delete this exception statement from your |
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20 * version. If you delete this exception statement from all source files |
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21 * in the program, then also delete it here. |
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22 * |
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23 * This program is distributed in the hope that it will be useful, but |
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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26 * General Public License for more details. |
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27 * |
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28 * You should have received a copy of the GNU General Public License |
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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30 **/ |
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31 |
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32 |
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33 #include "OrthancRestApi.h" |
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34 |
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35 #include "../OrthancInitialization.h" |
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36 #include "../../Core/HttpClient.h" |
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37 |
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38 #include <glog/logging.h> |
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39 |
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40 namespace Orthanc |
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41 { |
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42 // DICOM SCU ---------------------------------------------------------------- |
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43 |
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44 static bool MergeQueryAndTemplate(DicomMap& result, |
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45 const std::string& postData) |
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46 { |
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47 Json::Value query; |
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48 Json::Reader reader; |
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49 |
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50 if (!reader.parse(postData, query) || |
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51 query.type() != Json::objectValue) |
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52 { |
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53 return false; |
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54 } |
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55 |
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56 Json::Value::Members members = query.getMemberNames(); |
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57 for (size_t i = 0; i < members.size(); i++) |
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58 { |
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59 DicomTag t = FromDcmtkBridge::ParseTag(members[i]); |
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60 result.SetValue(t, query[members[i]].asString()); |
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61 } |
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62 |
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63 return true; |
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64 } |
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65 |
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66 static void DicomFindPatient(RestApi::PostCall& call) |
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67 { |
773 | 68 ServerContext& context = OrthancRestApi::GetContext(call); |
69 | |
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70 DicomMap m; |
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71 DicomMap::SetupFindPatientTemplate(m); |
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72 if (!MergeQueryAndTemplate(m, call.GetPostBody())) |
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73 { |
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74 return; |
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75 } |
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76 |
773 | 77 RemoteModalityParameters remote = GetModalityUsingSymbolicName(call.GetUriComponent("id", "")); |
776 | 78 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), remote); |
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79 |
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80 DicomFindAnswers answers; |
776 | 81 locker.GetConnection().FindPatient(answers, m); |
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82 |
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83 Json::Value result; |
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84 answers.ToJson(result); |
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85 call.GetOutput().AnswerJson(result); |
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86 } |
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87 |
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88 static void DicomFindStudy(RestApi::PostCall& call) |
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89 { |
773 | 90 ServerContext& context = OrthancRestApi::GetContext(call); |
91 | |
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92 DicomMap m; |
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93 DicomMap::SetupFindStudyTemplate(m); |
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94 if (!MergeQueryAndTemplate(m, call.GetPostBody())) |
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95 { |
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96 return; |
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97 } |
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98 |
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99 if (m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 && |
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100 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) |
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101 { |
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102 return; |
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103 } |
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104 |
773 | 105 RemoteModalityParameters remote = GetModalityUsingSymbolicName(call.GetUriComponent("id", "")); |
776 | 106 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), remote); |
773 | 107 |
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108 DicomFindAnswers answers; |
776 | 109 locker.GetConnection().FindStudy(answers, m); |
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110 |
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111 Json::Value result; |
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112 answers.ToJson(result); |
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113 call.GetOutput().AnswerJson(result); |
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114 } |
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115 |
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116 static void DicomFindSeries(RestApi::PostCall& call) |
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117 { |
773 | 118 ServerContext& context = OrthancRestApi::GetContext(call); |
119 | |
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120 DicomMap m; |
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121 DicomMap::SetupFindSeriesTemplate(m); |
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122 if (!MergeQueryAndTemplate(m, call.GetPostBody())) |
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123 { |
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124 return; |
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125 } |
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126 |
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127 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 && |
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128 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) || |
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129 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2) |
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130 { |
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131 return; |
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132 } |
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133 |
773 | 134 RemoteModalityParameters remote = GetModalityUsingSymbolicName(call.GetUriComponent("id", "")); |
776 | 135 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), remote); |
773 | 136 |
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137 DicomFindAnswers answers; |
776 | 138 locker.GetConnection().FindSeries(answers, m); |
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139 |
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140 Json::Value result; |
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141 answers.ToJson(result); |
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142 call.GetOutput().AnswerJson(result); |
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143 } |
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144 |
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145 static void DicomFindInstance(RestApi::PostCall& call) |
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146 { |
773 | 147 ServerContext& context = OrthancRestApi::GetContext(call); |
148 | |
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149 DicomMap m; |
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150 DicomMap::SetupFindInstanceTemplate(m); |
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151 if (!MergeQueryAndTemplate(m, call.GetPostBody())) |
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152 { |
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153 return; |
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154 } |
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155 |
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156 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 && |
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157 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) || |
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158 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2 || |
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159 m.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).AsString().size() <= 2) |
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160 { |
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161 return; |
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162 } |
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163 |
773 | 164 RemoteModalityParameters remote = GetModalityUsingSymbolicName(call.GetUriComponent("id", "")); |
776 | 165 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), remote); |
773 | 166 |
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167 DicomFindAnswers answers; |
776 | 168 locker.GetConnection().FindInstance(answers, m); |
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169 |
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170 Json::Value result; |
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171 answers.ToJson(result); |
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172 call.GetOutput().AnswerJson(result); |
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173 } |
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174 |
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175 static void DicomFind(RestApi::PostCall& call) |
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176 { |
773 | 177 ServerContext& context = OrthancRestApi::GetContext(call); |
178 | |
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179 DicomMap m; |
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180 DicomMap::SetupFindPatientTemplate(m); |
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181 if (!MergeQueryAndTemplate(m, call.GetPostBody())) |
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182 { |
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183 return; |
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184 } |
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185 |
773 | 186 RemoteModalityParameters remote = GetModalityUsingSymbolicName(call.GetUriComponent("id", "")); |
776 | 187 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), remote); |
773 | 188 |
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189 DicomFindAnswers patients; |
776 | 190 locker.GetConnection().FindPatient(patients, m); |
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191 |
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192 // Loop over the found patients |
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193 Json::Value result = Json::arrayValue; |
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194 for (size_t i = 0; i < patients.GetSize(); i++) |
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195 { |
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196 Json::Value patient(Json::objectValue); |
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197 FromDcmtkBridge::ToJson(patient, patients.GetAnswer(i)); |
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198 |
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199 DicomMap::SetupFindStudyTemplate(m); |
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200 if (!MergeQueryAndTemplate(m, call.GetPostBody())) |
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201 { |
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202 return; |
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203 } |
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204 m.CopyTagIfExists(patients.GetAnswer(i), DICOM_TAG_PATIENT_ID); |
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205 |
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206 DicomFindAnswers studies; |
776 | 207 locker.GetConnection().FindStudy(studies, m); |
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208 |
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209 patient["Studies"] = Json::arrayValue; |
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210 |
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211 // Loop over the found studies |
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212 for (size_t j = 0; j < studies.GetSize(); j++) |
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213 { |
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214 Json::Value study(Json::objectValue); |
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215 FromDcmtkBridge::ToJson(study, studies.GetAnswer(j)); |
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216 |
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217 DicomMap::SetupFindSeriesTemplate(m); |
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218 if (!MergeQueryAndTemplate(m, call.GetPostBody())) |
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219 { |
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220 return; |
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221 } |
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222 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_PATIENT_ID); |
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223 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_STUDY_INSTANCE_UID); |
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224 |
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225 DicomFindAnswers series; |
776 | 226 locker.GetConnection().FindSeries(series, m); |
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227 |
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228 // Loop over the found series |
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229 study["Series"] = Json::arrayValue; |
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230 for (size_t k = 0; k < series.GetSize(); k++) |
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231 { |
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232 Json::Value series2(Json::objectValue); |
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233 FromDcmtkBridge::ToJson(series2, series.GetAnswer(k)); |
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234 study["Series"].append(series2); |
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235 } |
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236 |
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237 patient["Studies"].append(study); |
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238 } |
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239 |
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240 result.append(patient); |
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241 } |
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242 |
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243 call.GetOutput().AnswerJson(result); |
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244 } |
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245 |
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246 |
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247 static bool GetInstancesToExport(std::list<std::string>& instances, |
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248 const std::string& remote, |
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249 RestApi::PostCall& call) |
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250 { |
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251 ServerContext& context = OrthancRestApi::GetContext(call); |
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252 |
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253 std::string stripped = Toolbox::StripSpaces(call.GetPostBody()); |
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254 |
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255 Json::Value request; |
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256 if (Toolbox::IsSHA1(stripped)) |
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257 { |
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258 // This is for compatibility with Orthanc <= 0.5.1. |
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259 request = stripped; |
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260 } |
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261 else if (!call.ParseJsonRequest(request)) |
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262 { |
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263 // Bad JSON request |
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264 return false; |
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265 } |
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266 |
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267 if (request.isString()) |
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268 { |
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269 context.GetIndex().LogExportedResource(request.asString(), remote); |
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270 context.GetIndex().GetChildInstances(instances, request.asString()); |
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271 } |
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272 else if (request.isArray()) |
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273 { |
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274 for (Json::Value::ArrayIndex i = 0; i < request.size(); i++) |
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275 { |
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276 if (!request[i].isString()) |
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277 { |
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278 return false; |
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279 } |
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280 |
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281 std::string stripped = Toolbox::StripSpaces(request[i].asString()); |
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282 if (!Toolbox::IsSHA1(stripped)) |
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283 { |
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284 return false; |
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285 } |
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286 |
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287 context.GetIndex().LogExportedResource(stripped, remote); |
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288 |
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289 std::list<std::string> tmp; |
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290 context.GetIndex().GetChildInstances(tmp, stripped); |
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291 |
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292 for (std::list<std::string>::const_iterator |
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293 it = tmp.begin(); it != tmp.end(); ++it) |
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294 { |
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295 instances.push_back(*it); |
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296 } |
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297 } |
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298 } |
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299 else |
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300 { |
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301 // Neither a string, nor a list of strings. Bad request. |
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302 return false; |
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303 } |
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304 |
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305 return true; |
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306 } |
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307 |
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308 |
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309 static void DicomStore(RestApi::PostCall& call) |
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310 { |
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311 ServerContext& context = OrthancRestApi::GetContext(call); |
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312 |
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313 std::string remote = call.GetUriComponent("id", ""); |
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314 |
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315 std::list<std::string> instances; |
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316 if (!GetInstancesToExport(instances, remote, call)) |
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317 { |
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318 return; |
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319 } |
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320 |
773 | 321 RemoteModalityParameters p = GetModalityUsingSymbolicName(remote); |
776 | 322 ReusableDicomUserConnection::Locker locker(context.GetReusableDicomUserConnection(), p); |
751
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323 |
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324 for (std::list<std::string>::const_iterator |
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325 it = instances.begin(); it != instances.end(); ++it) |
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326 { |
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327 LOG(INFO) << "Sending resource " << *it << " to modality \"" << remote << "\""; |
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328 |
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329 std::string dicom; |
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330 context.ReadFile(dicom, *it, FileContentType_Dicom); |
776 | 331 locker.GetConnection().Store(dicom); |
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332 } |
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333 |
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334 call.GetOutput().AnswerBuffer("{}", "application/json"); |
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335 } |
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336 |
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337 |
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338 // Orthanc Peers ------------------------------------------------------------ |
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339 |
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340 static bool IsExistingPeer(const OrthancRestApi::SetOfStrings& peers, |
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341 const std::string& id) |
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342 { |
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343 return peers.find(id) != peers.end(); |
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344 } |
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345 |
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346 static void ListPeers(RestApi::GetCall& call) |
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347 { |
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348 OrthancRestApi::SetOfStrings peers; |
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349 GetListOfOrthancPeers(peers); |
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350 |
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351 Json::Value result = Json::arrayValue; |
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352 for (OrthancRestApi::SetOfStrings::const_iterator |
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353 it = peers.begin(); it != peers.end(); ++it) |
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354 { |
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355 result.append(*it); |
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356 } |
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357 |
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358 call.GetOutput().AnswerJson(result); |
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359 } |
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360 |
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361 static void ListPeerOperations(RestApi::GetCall& call) |
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362 { |
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363 OrthancRestApi::SetOfStrings peers; |
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364 GetListOfOrthancPeers(peers); |
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365 |
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366 std::string id = call.GetUriComponent("id", ""); |
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367 if (IsExistingPeer(peers, id)) |
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368 { |
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369 Json::Value result = Json::arrayValue; |
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370 result.append("store"); |
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371 call.GetOutput().AnswerJson(result); |
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372 } |
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373 } |
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374 |
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375 static void PeerStore(RestApi::PostCall& call) |
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376 { |
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377 ServerContext& context = OrthancRestApi::GetContext(call); |
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378 |
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379 std::string remote = call.GetUriComponent("id", ""); |
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380 |
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381 std::list<std::string> instances; |
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382 if (!GetInstancesToExport(instances, remote, call)) |
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383 { |
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384 return; |
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385 } |
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386 |
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387 std::string url, username, password; |
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388 GetOrthancPeer(remote, url, username, password); |
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389 |
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390 // Configure the HTTP client |
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391 HttpClient client; |
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392 if (username.size() != 0 && password.size() != 0) |
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393 { |
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394 client.SetCredentials(username.c_str(), password.c_str()); |
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395 } |
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396 |
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397 client.SetUrl(url + "instances"); |
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398 client.SetMethod(HttpMethod_Post); |
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399 |
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400 // Loop over the instances that are to be sent |
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401 for (std::list<std::string>::const_iterator |
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402 it = instances.begin(); it != instances.end(); ++it) |
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403 { |
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404 LOG(INFO) << "Sending resource " << *it << " to peer \"" << remote << "\""; |
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405 |
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406 context.ReadFile(client.AccessPostData(), *it, FileContentType_Dicom); |
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407 |
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408 std::string answer; |
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409 if (!client.Apply(answer)) |
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410 { |
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411 LOG(ERROR) << "Unable to send resource " << *it << " to peer \"" << remote << "\""; |
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412 return; |
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413 } |
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414 } |
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415 |
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416 call.GetOutput().AnswerBuffer("{}", "application/json"); |
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417 } |
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418 |
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419 |
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420 // DICOM bridge ------------------------------------------------------------- |
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421 |
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422 static bool IsExistingModality(const OrthancRestApi::SetOfStrings& modalities, |
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423 const std::string& id) |
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424 { |
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425 return modalities.find(id) != modalities.end(); |
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426 } |
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427 |
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428 static void ListModalities(RestApi::GetCall& call) |
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429 { |
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430 OrthancRestApi::SetOfStrings modalities; |
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431 GetListOfDicomModalities(modalities); |
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432 |
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433 Json::Value result = Json::arrayValue; |
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434 for (OrthancRestApi::SetOfStrings::const_iterator |
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435 it = modalities.begin(); it != modalities.end(); ++it) |
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436 { |
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437 result.append(*it); |
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438 } |
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439 |
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440 call.GetOutput().AnswerJson(result); |
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441 } |
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442 |
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443 |
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444 static void ListModalityOperations(RestApi::GetCall& call) |
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445 { |
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446 OrthancRestApi::SetOfStrings modalities; |
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447 GetListOfDicomModalities(modalities); |
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448 |
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449 std::string id = call.GetUriComponent("id", ""); |
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450 if (IsExistingModality(modalities, id)) |
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451 { |
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452 Json::Value result = Json::arrayValue; |
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453 result.append("find-patient"); |
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454 result.append("find-study"); |
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455 result.append("find-series"); |
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456 result.append("find-instance"); |
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457 result.append("find"); |
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458 result.append("store"); |
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459 call.GetOutput().AnswerJson(result); |
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460 } |
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461 } |
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462 |
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463 |
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464 void OrthancRestApi::RegisterModalities() |
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465 { |
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466 Register("/modalities", ListModalities); |
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467 Register("/modalities/{id}", ListModalityOperations); |
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468 Register("/modalities/{id}/find-patient", DicomFindPatient); |
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469 Register("/modalities/{id}/find-study", DicomFindStudy); |
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470 Register("/modalities/{id}/find-series", DicomFindSeries); |
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471 Register("/modalities/{id}/find-instance", DicomFindInstance); |
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472 Register("/modalities/{id}/find", DicomFind); |
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473 Register("/modalities/{id}/store", DicomStore); |
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474 |
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475 Register("/peers", ListPeers); |
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476 Register("/peers/{id}", ListPeerOperations); |
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477 Register("/peers/{id}/store", PeerStore); |
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478 } |
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479 } |