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annotate OrthancServer/Sources/Database/StatelessDatabaseOperations.h @ 5043:ec5c203a97ea

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returning sequences in MainDicomTags and RequestedTags
author Alain Mazy <am@osimis.io>
date Mon, 27 Jun 2022 15:22:19 +0200
parents 28db9663fc2d
children 6fed78e13233
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2022 Osimis S.A., Belgium
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6 * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
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7 *
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8 * This program is free software: you can redistribute it and/or
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9 * modify it under the terms of the GNU General Public License as
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10 * published by the Free Software Foundation, either version 3 of the
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11 * License, or (at your option) any later version.
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12 *
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13 * This program is distributed in the hope that it will be useful, but
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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16 * General Public License for more details.
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17 *
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18 * You should have received a copy of the GNU General Public License
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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20 **/
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21
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22
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23 #pragma once
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24
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25 #include "../../../OrthancFramework/Sources/DicomFormat/DicomMap.h"
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26 #include "../../../OrthancFramework/Sources/DicomFormat/DicomSequencesMap.h"
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27
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28 #include "IDatabaseWrapper.h"
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29 #include "../DicomInstanceOrigin.h"
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30
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31 #include <boost/shared_ptr.hpp>
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32 #include <boost/thread/shared_mutex.hpp>
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33
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34
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35 namespace Orthanc
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36 {
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37 class DatabaseLookup;
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38 class ParsedDicomFile;
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39 struct ServerIndexChange;
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40
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41 struct ExpandedResource : public boost::noncopyable
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42 {
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43 std::string id_;
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44 DicomMap tags_; // all tags from DB (only leaf tags, not sequences !)
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45 DicomSequencesMap sequences_; // the requested sequences (from MainDicomTags or RequestedTags)
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46 std::string mainDicomTagsSignature_;
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47 std::string parentId_;
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48 std::list<std::string> childrenIds_;
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49 std::map<MetadataType, std::string> metadata_;
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50 ResourceType type_;
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51 std::string anonymizedFrom_;
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52 std::string modifiedFrom_;
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53 std::string lastUpdate_;
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54 std::set<DicomTag> missingRequestedTags_;
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55
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56 // for patients/studies/series
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57 bool isStable_;
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58
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59 // for series only
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60 int expectedNumberOfInstances_;
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61 std::string status_;
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62
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63 // for instances only
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64 size_t fileSize_;
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65 std::string fileUuid_;
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66 int indexInSeries_;
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67 };
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68
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69 enum ExpandResourceDbFlags
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70 {
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71 ExpandResourceDbFlags_None = 0,
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72 ExpandResourceDbFlags_IncludeMetadata = (1 << 0),
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73 ExpandResourceDbFlags_IncludeChildren = (1 << 1),
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74 ExpandResourceDbFlags_IncludeMainDicomTags = (1 << 2),
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75
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76 ExpandResourceDbFlags_Default = (ExpandResourceDbFlags_IncludeMetadata |
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77 ExpandResourceDbFlags_IncludeChildren |
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78 ExpandResourceDbFlags_IncludeMainDicomTags)
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79 };
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80
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81 class StatelessDatabaseOperations : public boost::noncopyable
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82 {
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83 public:
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84 typedef std::list<FileInfo> Attachments;
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85 typedef std::map<std::pair<ResourceType, MetadataType>, std::string> MetadataMap;
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86
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87 class ITransactionContext : public IDatabaseListener
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88 {
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89 public:
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90 virtual ~ITransactionContext()
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91 {
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92 }
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93
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94 virtual void Commit() = 0;
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95
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96 virtual int64_t GetCompressedSizeDelta() = 0;
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97
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98 virtual bool IsUnstableResource(int64_t id) = 0;
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99
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100 virtual bool LookupRemainingLevel(std::string& remainingPublicId /* out */,
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101 ResourceType& remainingLevel /* out */) = 0;
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102
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103 virtual void MarkAsUnstable(int64_t id,
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104 Orthanc::ResourceType type,
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105 const std::string& publicId) = 0;
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106
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107 virtual void SignalAttachmentsAdded(uint64_t compressedSize) = 0;
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108
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109 virtual void SignalChange(const ServerIndexChange& change) = 0;
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110 };
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111
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112
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113 class ITransactionContextFactory : public boost::noncopyable
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114 {
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115 public:
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116 virtual ~ITransactionContextFactory()
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117 {
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118 }
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119
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120 // WARNING: This method can be invoked from several threads concurrently
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121 virtual ITransactionContext* Create() = 0;
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122 };
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123
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124
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125 class ReadOnlyTransaction : public boost::noncopyable
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126 {
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127 private:
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128 ITransactionContext& context_;
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129
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130 protected:
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131 IDatabaseWrapper::ITransaction& transaction_;
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132
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133 public:
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134 explicit ReadOnlyTransaction(IDatabaseWrapper::ITransaction& transaction,
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135 ITransactionContext& context) :
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136 context_(context),
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137 transaction_(transaction)
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138 {
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139 }
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140
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141 ITransactionContext& GetTransactionContext()
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142 {
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143 return context_;
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144 }
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145
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146 /**
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147 * Higher-level constructions
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148 **/
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149
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150 SeriesStatus GetSeriesStatus(int64_t id,
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151 int64_t expectedNumberOfInstances);
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152
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153
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154 /**
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155 * Read-only methods from "IDatabaseWrapper"
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156 **/
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157
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158 void ApplyLookupResources(std::list<std::string>& resourcesId,
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159 std::list<std::string>* instancesId, // Can be NULL if not needed
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160 const std::vector<DatabaseConstraint>& lookup,
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161 ResourceType queryLevel,
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162 size_t limit)
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163 {
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164 return transaction_.ApplyLookupResources(resourcesId, instancesId, lookup, queryLevel, limit);
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165 }
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166
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167 void GetAllMetadata(std::map<MetadataType, std::string>& target,
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168 int64_t id)
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169 {
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170 transaction_.GetAllMetadata(target, id);
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171 }
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172
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173 void GetAllPublicIds(std::list<std::string>& target,
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174 ResourceType resourceType)
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175 {
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176 return transaction_.GetAllPublicIds(target, resourceType);
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177 }
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178
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179 void GetAllPublicIds(std::list<std::string>& target,
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180 ResourceType resourceType,
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181 size_t since,
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182 size_t limit)
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183 {
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184 return transaction_.GetAllPublicIds(target, resourceType, since, limit);
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185 }
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186
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187 void GetChanges(std::list<ServerIndexChange>& target /*out*/,
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188 bool& done /*out*/,
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189 int64_t since,
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190 uint32_t maxResults)
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191 {
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192 transaction_.GetChanges(target, done, since, maxResults);
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193 }
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194
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195 void GetChildrenInternalId(std::list<int64_t>& target,
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196 int64_t id)
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197 {
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198 transaction_.GetChildrenInternalId(target, id);
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199 }
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200
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201 void GetChildrenPublicId(std::list<std::string>& target,
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202 int64_t id)
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203 {
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204 transaction_.GetChildrenPublicId(target, id);
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205 }
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206
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207 void GetExportedResources(std::list<ExportedResource>& target /*out*/,
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208 bool& done /*out*/,
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209 int64_t since,
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210 uint32_t maxResults)
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211 {
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212 return transaction_.GetExportedResources(target, done, since, maxResults);
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213 }
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214
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215 void GetLastChange(std::list<ServerIndexChange>& target /*out*/)
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216 {
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217 transaction_.GetLastChange(target);
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218 }
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219
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220 void GetLastExportedResource(std::list<ExportedResource>& target /*out*/)
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221 {
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222 return transaction_.GetLastExportedResource(target);
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223 }
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224
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225 int64_t GetLastChangeIndex()
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226 {
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227 return transaction_.GetLastChangeIndex();
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228 }
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229
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230 void GetMainDicomTags(DicomMap& map,
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231 int64_t id)
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232 {
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233 transaction_.GetMainDicomTags(map, id);
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234 }
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235
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236 std::string GetPublicId(int64_t resourceId)
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237 {
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238 return transaction_.GetPublicId(resourceId);
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239 }
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240
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241 uint64_t GetResourcesCount(ResourceType resourceType)
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242 {
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243 return transaction_.GetResourcesCount(resourceType);
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244 }
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245
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246 ResourceType GetResourceType(int64_t resourceId)
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247 {
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248 return transaction_.GetResourceType(resourceId);
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249 }
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250
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251 uint64_t GetTotalCompressedSize()
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252 {
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253 return transaction_.GetTotalCompressedSize();
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254 }
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255
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256 uint64_t GetTotalUncompressedSize()
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257 {
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258 return transaction_.GetTotalUncompressedSize();
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259 }
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260
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261 bool IsProtectedPatient(int64_t internalId)
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262 {
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263 return transaction_.IsProtectedPatient(internalId);
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264 }
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265
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266 void ListAvailableAttachments(std::set<FileContentType>& target,
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267 int64_t id)
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268 {
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269 transaction_.ListAvailableAttachments(target, id);
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270 }
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271
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272 bool LookupAttachment(FileInfo& attachment,
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273 int64_t& revision,
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274 int64_t id,
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275 FileContentType contentType)
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276 {
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277 return transaction_.LookupAttachment(attachment, revision, id, contentType);
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278 }
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279
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280 bool LookupGlobalProperty(std::string& target,
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281 GlobalProperty property,
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282 bool shared)
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283 {
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284 return transaction_.LookupGlobalProperty(target, property, shared);
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285 }
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286
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287 bool LookupMetadata(std::string& target,
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288 int64_t& revision,
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289 int64_t id,
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290 MetadataType type)
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291 {
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292 return transaction_.LookupMetadata(target, revision, id, type);
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293 }
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294
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295 bool LookupParent(int64_t& parentId,
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296 int64_t resourceId)
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297 {
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298 return transaction_.LookupParent(parentId, resourceId);
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299 }
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300
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301 bool LookupResource(int64_t& id,
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302 ResourceType& type,
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303 const std::string& publicId)
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304 {
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305 return transaction_.LookupResource(id, type, publicId);
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306 }
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307
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308 bool LookupResourceAndParent(int64_t& id,
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309 ResourceType& type,
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310 std::string& parentPublicId,
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311 const std::string& publicId)
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312 {
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313 return transaction_.LookupResourceAndParent(id, type, parentPublicId, publicId);
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314 }
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315 };
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316
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317
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318 class ReadWriteTransaction : public ReadOnlyTransaction
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319 {
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320 public:
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321 ReadWriteTransaction(IDatabaseWrapper::ITransaction& transaction,
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322 ITransactionContext& context) :
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323 ReadOnlyTransaction(transaction, context)
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324 {
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325 }
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326
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327 void AddAttachment(int64_t id,
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diff changeset
328 const FileInfo& attachment,
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329 int64_t revision)
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330 {
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331 transaction_.AddAttachment(id, attachment, revision);
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332 }
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333
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334 void ClearChanges()
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335 {
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diff changeset
336 transaction_.ClearChanges();
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337 }
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338
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339 void ClearExportedResources()
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340 {
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diff changeset
341 transaction_.ClearExportedResources();
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diff changeset
342 }
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343
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diff changeset
344 void ClearMainDicomTags(int64_t id)
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diff changeset
345 {
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346 return transaction_.ClearMainDicomTags(id);
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diff changeset
347 }
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diff changeset
348
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349 bool CreateInstance(IDatabaseWrapper::CreateInstanceResult& result, /* out */
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350 int64_t& instanceId, /* out */
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351 const std::string& patient,
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diff changeset
352 const std::string& study,
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diff changeset
353 const std::string& series,
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diff changeset
354 const std::string& instance)
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diff changeset
355 {
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diff changeset
356 return transaction_.CreateInstance(result, instanceId, patient, study, series, instance);
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diff changeset
357 }
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diff changeset
358
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diff changeset
359 void DeleteAttachment(int64_t id,
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parents:
diff changeset
360 FileContentType attachment)
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diff changeset
361 {
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diff changeset
362 return transaction_.DeleteAttachment(id, attachment);
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diff changeset
363 }
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diff changeset
364
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diff changeset
365 void DeleteMetadata(int64_t id,
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parents:
diff changeset
366 MetadataType type)
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diff changeset
367 {
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diff changeset
368 transaction_.DeleteMetadata(id, type);
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diff changeset
369 }
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diff changeset
370
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diff changeset
371 void DeleteResource(int64_t id)
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parents:
diff changeset
372 {
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diff changeset
373 transaction_.DeleteResource(id);
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diff changeset
374 }
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parents:
diff changeset
375
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diff changeset
376 void LogChange(int64_t internalId,
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parents:
diff changeset
377 ChangeType changeType,
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diff changeset
378 ResourceType resourceType,
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diff changeset
379 const std::string& publicId);
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parents:
diff changeset
380
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diff changeset
381 void LogExportedResource(const ExportedResource& resource)
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parents:
diff changeset
382 {
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diff changeset
383 transaction_.LogExportedResource(resource);
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parents:
diff changeset
384 }
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parents:
diff changeset
385
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
386 void SetGlobalProperty(GlobalProperty property,
4607
f75c63aa9de0 differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4595
diff changeset
387 bool shared,
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
388 const std::string& value)
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
389 {
4607
f75c63aa9de0 differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4595
diff changeset
390 transaction_.SetGlobalProperty(property, shared, value);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
391 }
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
392
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
393 void SetMetadata(int64_t id,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
394 MetadataType type,
4623
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
395 const std::string& value,
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
396 int64_t revision)
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
397 {
4623
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
398 return transaction_.SetMetadata(id, type, value, revision);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
399 }
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
400
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
401 void SetProtectedPatient(int64_t internalId,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
402 bool isProtected)
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
403 {
4591
ff8170d17d90 moving all accesses to databases from IDatabaseWrapper to ITransaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4589
diff changeset
404 transaction_.SetProtectedPatient(internalId, isProtected);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
405 }
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
406
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
407 void SetResourcesContent(const ResourcesContent& content)
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
408 {
4591
ff8170d17d90 moving all accesses to databases from IDatabaseWrapper to ITransaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4589
diff changeset
409 transaction_.SetResourcesContent(content);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
410 }
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
411
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
412 void Recycle(uint64_t maximumStorageSize,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
413 unsigned int maximumPatients,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
414 uint64_t addedInstanceSize,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
415 const std::string& newPatientId);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
416 };
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
417
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
418
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
419 class IReadOnlyOperations : public boost::noncopyable
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
420 {
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
421 public:
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
422 virtual ~IReadOnlyOperations()
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
423 {
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
424 }
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
425
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
426 virtual void Apply(ReadOnlyTransaction& transaction) = 0;
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
427 };
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
428
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
429
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
430 class IReadWriteOperations : public boost::noncopyable
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
431 {
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
432 public:
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
433 virtual ~IReadWriteOperations()
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
434 {
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
435 }
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
436
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
437 virtual void Apply(ReadWriteTransaction& transaction) = 0;
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
438 };
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
439
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
440
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
441 private:
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
442 class MainDicomTagsRegistry;
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
443 class Transaction;
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
444
4587
888868a5dc4e ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4586
diff changeset
445 IDatabaseWrapper& db_;
4613
2684544ff03c maximum number of database retries for writer collisions is now set by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
446 boost::shared_ptr<MainDicomTagsRegistry> mainDicomTagsRegistry_; // "shared_ptr" because of PImpl
2684544ff03c maximum number of database retries for writer collisions is now set by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
447 bool hasFlushToDisk_;
2684544ff03c maximum number of database retries for writer collisions is now set by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
448
2684544ff03c maximum number of database retries for writer collisions is now set by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
449 // Mutex to protect the configuration options
2684544ff03c maximum number of database retries for writer collisions is now set by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
450 boost::shared_mutex mutex_;
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
451 std::unique_ptr<ITransactionContextFactory> factory_;
4587
888868a5dc4e ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4586
diff changeset
452 unsigned int maxRetries_;
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
453
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
454 void NormalizeLookup(std::vector<DatabaseConstraint>& target,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
455 const DatabaseLookup& source,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
456 ResourceType level) const;
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
457
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
458 void ApplyInternal(IReadOnlyOperations* readOperations,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
459 IReadWriteOperations* writeOperations);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
460
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
461 protected:
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
462 void StandaloneRecycling(uint64_t maximumStorageSize,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
463 unsigned int maximumPatientCount);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
464
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
465 public:
4591
ff8170d17d90 moving all accesses to databases from IDatabaseWrapper to ITransaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4589
diff changeset
466 explicit StatelessDatabaseOperations(IDatabaseWrapper& database);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
467
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
468 void SetTransactionContextFactory(ITransactionContextFactory* factory /* takes ownership */);
4613
2684544ff03c maximum number of database retries for writer collisions is now set by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
469
2684544ff03c maximum number of database retries for writer collisions is now set by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
470 // Only used to handle "ErrorCode_DatabaseCannotSerialize" in the
2684544ff03c maximum number of database retries for writer collisions is now set by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
471 // case of collision between multiple writers
2684544ff03c maximum number of database retries for writer collisions is now set by the plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
472 void SetMaxDatabaseRetries(unsigned int maxRetries);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
473
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
474 // It is assumed that "GetDatabaseVersion()" can run out of a
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
475 // database transaction
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
476 unsigned int GetDatabaseVersion()
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
477 {
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
478 return db_.GetDatabaseVersion();
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
479 }
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
480
4587
888868a5dc4e ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4586
diff changeset
481 void FlushToDisk();
888868a5dc4e ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4586
diff changeset
482
888868a5dc4e ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4586
diff changeset
483 bool HasFlushToDisk() const
888868a5dc4e ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4586
diff changeset
484 {
888868a5dc4e ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4586
diff changeset
485 return hasFlushToDisk_;
888868a5dc4e ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4586
diff changeset
486 }
888868a5dc4e ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4586
diff changeset
487
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
488 void Apply(IReadOnlyOperations& operations);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
489
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
490 void Apply(IReadWriteOperations& operations);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
491
4935
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
492 bool ExpandResource(ExpandedResource& target,
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
493 const std::string& publicId,
4697
569d9ef165b1 Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4694
diff changeset
494 ResourceType level,
4940
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4939
diff changeset
495 const std::set<DicomTag>& requestedTags,
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4939
diff changeset
496 ExpandResourceDbFlags expandFlags);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
497
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
498 void GetAllMetadata(std::map<MetadataType, std::string>& target,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
499 const std::string& publicId,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
500 ResourceType level);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
501
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
502 void GetAllUuids(std::list<std::string>& target,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
503 ResourceType resourceType);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
504
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
505 void GetAllUuids(std::list<std::string>& target,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
506 ResourceType resourceType,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
507 size_t since,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
508 size_t limit);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
509
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
510 void GetGlobalStatistics(/* out */ uint64_t& diskSize,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
511 /* out */ uint64_t& uncompressedSize,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
512 /* out */ uint64_t& countPatients,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
513 /* out */ uint64_t& countStudies,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
514 /* out */ uint64_t& countSeries,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
515 /* out */ uint64_t& countInstances);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
516
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
517 bool LookupAttachment(FileInfo& attachment,
4627
f7d5372b59b3 handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4623
diff changeset
518 int64_t& revision,
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
519 const std::string& instancePublicId,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
520 FileContentType contentType);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
521
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
522 void GetChanges(Json::Value& target,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
523 int64_t since,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
524 unsigned int maxResults);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
525
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
526 void GetLastChange(Json::Value& target);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
527
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
528 void GetExportedResources(Json::Value& target,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
529 int64_t since,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
530 unsigned int maxResults);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
531
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
532 void GetLastExportedResource(Json::Value& target);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
533
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
534 bool IsProtectedPatient(const std::string& publicId);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
535
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
536 void GetChildren(std::list<std::string>& result,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
537 const std::string& publicId);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
538
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
539 void GetChildInstances(std::list<std::string>& result,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
540 const std::string& publicId);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
541
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
542 bool LookupMetadata(std::string& target,
4623
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
543 int64_t& revision,
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
544 const std::string& publicId,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
545 ResourceType expectedType,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
546 MetadataType type);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
547
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
548 void ListAvailableAttachments(std::set<FileContentType>& target,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
549 const std::string& publicId,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
550 ResourceType expectedType);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
551
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
552 bool LookupParent(std::string& target,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
553 const std::string& publicId);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
554
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
555 void GetResourceStatistics(/* out */ ResourceType& type,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
556 /* out */ uint64_t& diskSize,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
557 /* out */ uint64_t& uncompressedSize,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
558 /* out */ unsigned int& countStudies,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
559 /* out */ unsigned int& countSeries,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
560 /* out */ unsigned int& countInstances,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
561 /* out */ uint64_t& dicomDiskSize,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
562 /* out */ uint64_t& dicomUncompressedSize,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
563 const std::string& publicId);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
564
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
565 void LookupIdentifierExact(std::vector<std::string>& result,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
566 ResourceType level,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
567 const DicomTag& tag,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
568 const std::string& value);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
569
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
570 bool LookupGlobalProperty(std::string& value,
4607
f75c63aa9de0 differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4595
diff changeset
571 GlobalProperty property,
f75c63aa9de0 differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4595
diff changeset
572 bool shared);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
573
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
574 std::string GetGlobalProperty(GlobalProperty property,
4607
f75c63aa9de0 differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4595
diff changeset
575 bool shared,
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
576 const std::string& defaultValue);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
577
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
578 bool GetMainDicomTags(DicomMap& result,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
579 const std::string& publicId,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
580 ResourceType expectedType,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
581 ResourceType levelOfInterest);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
582
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
583 // Only applicable at the instance level
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
584 bool GetAllMainDicomTags(DicomMap& result,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
585 const std::string& instancePublicId);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
587 bool LookupResourceType(ResourceType& type,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
588 const std::string& publicId);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
589
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
590 bool LookupParent(std::string& target,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
591 const std::string& publicId,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
592 ResourceType parentType);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
593
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
594 void ApplyLookupResources(std::vector<std::string>& resourcesId,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
595 std::vector<std::string>* instancesId, // Can be NULL if not needed
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
596 const DatabaseLookup& lookup,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
597 ResourceType queryLevel,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
598 size_t limit);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
599
4694
da1edb7d6332 "/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4640
diff changeset
600 bool DeleteResource(Json::Value& remainingAncestor /* out */,
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
601 const std::string& uuid,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
602 ResourceType expectedType);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
603
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
604 void LogExportedResource(const std::string& publicId,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
605 const std::string& remoteModality);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
606
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
607 void SetProtectedPatient(const std::string& publicId,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
608 bool isProtected);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
609
4623
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
610 void SetMetadata(int64_t& newRevision /*out*/,
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
611 const std::string& publicId,
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
612 MetadataType type,
4623
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
613 const std::string& value,
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
614 bool hasOldRevision,
4640
66109d24d26e "ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4627
diff changeset
615 int64_t oldRevision,
66109d24d26e "ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4627
diff changeset
616 const std::string& oldMD5);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
617
4623
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
618 // Same as "SetMetadata()", but doesn't care about revisions
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
619 void OverwriteMetadata(const std::string& publicId,
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
620 MetadataType type,
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
621 const std::string& value);
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
622
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
623 bool DeleteMetadata(const std::string& publicId,
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
624 MetadataType type,
95ffe3b6ef7c handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4613
diff changeset
625 bool hasRevision,
4640
66109d24d26e "ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4627
diff changeset
626 int64_t revision,
66109d24d26e "ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4627
diff changeset
627 const std::string& md5);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
628
4607
f75c63aa9de0 differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4595
diff changeset
629 uint64_t IncrementGlobalSequence(GlobalProperty sequence,
f75c63aa9de0 differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4595
diff changeset
630 bool shared);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
631
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
632 void DeleteChanges();
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
633
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
634 void DeleteExportedResources();
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
635
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
636 void SetGlobalProperty(GlobalProperty property,
4607
f75c63aa9de0 differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4595
diff changeset
637 bool shared,
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
638 const std::string& value);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
639
4627
f7d5372b59b3 handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4623
diff changeset
640 bool DeleteAttachment(const std::string& publicId,
f7d5372b59b3 handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4623
diff changeset
641 FileContentType type,
f7d5372b59b3 handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4623
diff changeset
642 bool hasRevision,
4640
66109d24d26e "ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4627
diff changeset
643 int64_t revision,
66109d24d26e "ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4627
diff changeset
644 const std::string& md5);
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
645
4587
888868a5dc4e ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4586
diff changeset
646 void LogChange(int64_t internalId,
888868a5dc4e ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4586
diff changeset
647 ChangeType changeType,
4586
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
648 const std::string& publicId,
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
649 ResourceType level);
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
650
1d96fe7e054e taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
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651 void ReconstructInstance(const ParsedDicomFile& dicom);
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Sebastien Jodogne <s.jodogne@gmail.com>
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652
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Sebastien Jodogne <s.jodogne@gmail.com>
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653 StoreStatus Store(std::map<MetadataType, std::string>& instanceMetadata,
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654 const DicomMap& dicomSummary,
5039
28db9663fc2d DicomSequencesMap + fix unit tests
Alain Mazy <am@osimis.io>
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655 const DicomSequencesMap& sequencesToStore,
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656 const Attachments& attachments,
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Sebastien Jodogne <s.jodogne@gmail.com>
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657 const MetadataMap& metadata,
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Sebastien Jodogne <s.jodogne@gmail.com>
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658 const DicomInstanceOrigin& origin,
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Sebastien Jodogne <s.jodogne@gmail.com>
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659 bool overwrite,
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Sebastien Jodogne <s.jodogne@gmail.com>
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660 bool hasTransferSyntax,
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661 DicomTransferSyntax transferSyntax,
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Sebastien Jodogne <s.jodogne@gmail.com>
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662 bool hasPixelDataOffset,
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Sebastien Jodogne <s.jodogne@gmail.com>
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663 uint64_t pixelDataOffset,
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664 uint64_t maximumStorageSize,
4988
8fba26292a9f Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents: 4940
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665 unsigned int maximumPatients,
8fba26292a9f Housekeeper plugin: finalizing + integration tests ok
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parents: 4940
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666 bool isReconstruct);
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667
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parents: 4623
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668 StoreStatus AddAttachment(int64_t& newRevision /*out*/,
f7d5372b59b3 handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4623
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669 const FileInfo& attachment,
4586
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Sebastien Jodogne <s.jodogne@gmail.com>
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670 const std::string& publicId,
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Sebastien Jodogne <s.jodogne@gmail.com>
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671 uint64_t maximumStorageSize,
4627
f7d5372b59b3 handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4623
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672 unsigned int maximumPatients,
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4623
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673 bool hasOldRevision,
4640
66109d24d26e "ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4627
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674 int64_t oldRevision,
66109d24d26e "ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4627
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675 const std::string& oldMd5);
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Sebastien Jodogne <s.jodogne@gmail.com>
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676 };
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Sebastien Jodogne <s.jodogne@gmail.com>
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677 }