annotate OrthancServer/OrthancRestApi.cpp @ 515:a8be42bcf2bb

Link from modified to original resource in Orthanc Explorer
author Sebastien Jodogne <s.jodogne@gmail.com>
date Mon, 19 Aug 2013 13:40:36 +0200
parents 7db04aa5104f
children 1b2cdc855bd3
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2013 Medical Physics Department, CHU of Liege,
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4 * Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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32
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33 #include "OrthancRestApi.h"
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34
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35 #include "../Core/Compression/HierarchicalZipWriter.h"
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36 #include "../Core/HttpClient.h"
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37 #include "../Core/HttpServer/FilesystemHttpSender.h"
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38 #include "../Core/Uuid.h"
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39 #include "DicomProtocol/DicomUserConnection.h"
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40 #include "FromDcmtkBridge.h"
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41 #include "OrthancInitialization.h"
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42 #include "ServerToolbox.h"
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43
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44 #include <dcmtk/dcmdata/dcistrmb.h>
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45 #include <dcmtk/dcmdata/dcfilefo.h>
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46 #include <boost/lexical_cast.hpp>
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47 #include <glog/logging.h>
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49
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50 #define RETRIEVE_CONTEXT(call) \
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51 OrthancRestApi& contextApi = \
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52 dynamic_cast<OrthancRestApi&>(call.GetContext()); \
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53 ServerContext& context = contextApi.GetContext()
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54
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55 #define RETRIEVE_MODALITIES(call) \
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56 const OrthancRestApi::SetOfStrings& modalities = \
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57 dynamic_cast<OrthancRestApi&>(call.GetContext()).GetModalities();
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58
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59 #define RETRIEVE_PEERS(call) \
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60 const OrthancRestApi::SetOfStrings& peers = \
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61 dynamic_cast<OrthancRestApi&>(call.GetContext()).GetPeers();
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65 namespace Orthanc
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66 {
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67 // TODO IMPROVE MULTITHREADING
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68 // Every call to "ParsedDicomFile" must lock this mutex!!!
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69 static boost::mutex cacheMutex_;
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70
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71
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72 // DICOM SCU ----------------------------------------------------------------
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73
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74 static void ConnectToModality(DicomUserConnection& connection,
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75 const std::string& name)
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76 {
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77 std::string aet, address;
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78 int port;
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79 GetDicomModality(name, aet, address, port);
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80 connection.SetLocalApplicationEntityTitle(GetGlobalStringParameter("DicomAet", "ORTHANC"));
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81 connection.SetDistantApplicationEntityTitle(aet);
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82 connection.SetDistantHost(address);
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83 connection.SetDistantPort(port);
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84 connection.Open();
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85 }
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86
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87 static bool MergeQueryAndTemplate(DicomMap& result,
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88 const std::string& postData)
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89 {
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90 Json::Value query;
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91 Json::Reader reader;
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92
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93 if (!reader.parse(postData, query) ||
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94 query.type() != Json::objectValue)
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95 {
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96 return false;
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97 }
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98
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99 Json::Value::Members members = query.getMemberNames();
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100 for (size_t i = 0; i < members.size(); i++)
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101 {
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102 DicomTag t = FromDcmtkBridge::ParseTag(members[i]);
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103 result.SetValue(t, query[members[i]].asString());
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104 }
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105
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106 return true;
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107 }
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108
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109 static void DicomFindPatient(RestApi::PostCall& call)
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110 {
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111 DicomMap m;
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112 DicomMap::SetupFindPatientTemplate(m);
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113 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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114 {
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115 return;
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116 }
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117
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118 DicomUserConnection connection;
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119 ConnectToModality(connection, call.GetUriComponent("id", ""));
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120
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121 DicomFindAnswers answers;
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122 connection.FindPatient(answers, m);
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123
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124 Json::Value result;
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125 answers.ToJson(result);
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126 call.GetOutput().AnswerJson(result);
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127 }
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128
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129 static void DicomFindStudy(RestApi::PostCall& call)
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130 {
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131 DicomMap m;
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132 DicomMap::SetupFindStudyTemplate(m);
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diff changeset
133 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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diff changeset
134 {
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diff changeset
135 return;
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diff changeset
136 }
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diff changeset
137
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diff changeset
138 if (m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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139 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2)
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diff changeset
140 {
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diff changeset
141 return;
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diff changeset
142 }
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diff changeset
143
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diff changeset
144 DicomUserConnection connection;
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diff changeset
145 ConnectToModality(connection, call.GetUriComponent("id", ""));
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diff changeset
146
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diff changeset
147 DicomFindAnswers answers;
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diff changeset
148 connection.FindStudy(answers, m);
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149
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diff changeset
150 Json::Value result;
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diff changeset
151 answers.ToJson(result);
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diff changeset
152 call.GetOutput().AnswerJson(result);
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153 }
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diff changeset
154
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diff changeset
155 static void DicomFindSeries(RestApi::PostCall& call)
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diff changeset
156 {
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diff changeset
157 DicomMap m;
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158 DicomMap::SetupFindSeriesTemplate(m);
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diff changeset
159 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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diff changeset
160 {
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diff changeset
161 return;
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diff changeset
162 }
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diff changeset
163
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diff changeset
164 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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diff changeset
165 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) ||
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diff changeset
166 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2)
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diff changeset
167 {
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diff changeset
168 return;
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diff changeset
169 }
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diff changeset
170
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diff changeset
171 DicomUserConnection connection;
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172 ConnectToModality(connection, call.GetUriComponent("id", ""));
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diff changeset
173
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diff changeset
174 DicomFindAnswers answers;
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diff changeset
175 connection.FindSeries(answers, m);
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176
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diff changeset
177 Json::Value result;
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178 answers.ToJson(result);
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179 call.GetOutput().AnswerJson(result);
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180 }
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diff changeset
181
499
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diff changeset
182 static void DicomFindInstance(RestApi::PostCall& call)
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diff changeset
183 {
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diff changeset
184 DicomMap m;
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185 DicomMap::SetupFindInstanceTemplate(m);
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diff changeset
186 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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diff changeset
187 {
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188 return;
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189 }
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diff changeset
190
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diff changeset
191 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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diff changeset
192 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) ||
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diff changeset
193 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2 ||
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diff changeset
194 m.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).AsString().size() <= 2)
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diff changeset
195 {
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196 return;
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197 }
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198
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diff changeset
199 DicomUserConnection connection;
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diff changeset
200 ConnectToModality(connection, call.GetUriComponent("id", ""));
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diff changeset
201
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diff changeset
202 DicomFindAnswers answers;
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diff changeset
203 connection.FindInstance(answers, m);
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diff changeset
204
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diff changeset
205 Json::Value result;
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diff changeset
206 answers.ToJson(result);
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diff changeset
207 call.GetOutput().AnswerJson(result);
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diff changeset
208 }
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diff changeset
209
227
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diff changeset
210 static void DicomFind(RestApi::PostCall& call)
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diff changeset
211 {
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diff changeset
212 DicomMap m;
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diff changeset
213 DicomMap::SetupFindPatientTemplate(m);
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diff changeset
214 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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diff changeset
215 {
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diff changeset
216 return;
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parents: 226
diff changeset
217 }
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diff changeset
218
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diff changeset
219 DicomUserConnection connection;
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parents: 226
diff changeset
220 ConnectToModality(connection, call.GetUriComponent("id", ""));
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parents: 226
diff changeset
221
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diff changeset
222 DicomFindAnswers patients;
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diff changeset
223 connection.FindPatient(patients, m);
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diff changeset
224
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diff changeset
225 // Loop over the found patients
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diff changeset
226 Json::Value result = Json::arrayValue;
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diff changeset
227 for (size_t i = 0; i < patients.GetSize(); i++)
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parents: 226
diff changeset
228 {
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diff changeset
229 Json::Value patient(Json::objectValue);
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parents: 226
diff changeset
230 FromDcmtkBridge::ToJson(patient, patients.GetAnswer(i));
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parents: 226
diff changeset
231
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
232 DicomMap::SetupFindStudyTemplate(m);
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diff changeset
233 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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parents: 226
diff changeset
234 {
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
235 return;
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
236 }
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parents: 226
diff changeset
237 m.CopyTagIfExists(patients.GetAnswer(i), DICOM_TAG_PATIENT_ID);
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parents: 226
diff changeset
238
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
239 DicomFindAnswers studies;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
240 connection.FindStudy(studies, m);
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parents: 226
diff changeset
241
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parents: 226
diff changeset
242 patient["Studies"] = Json::arrayValue;
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parents: 226
diff changeset
243
209ca3f6db62 dicom-scu from rest
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diff changeset
244 // Loop over the found studies
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diff changeset
245 for (size_t j = 0; j < studies.GetSize(); j++)
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parents: 226
diff changeset
246 {
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diff changeset
247 Json::Value study(Json::objectValue);
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parents: 226
diff changeset
248 FromDcmtkBridge::ToJson(study, studies.GetAnswer(j));
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parents: 226
diff changeset
249
209ca3f6db62 dicom-scu from rest
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diff changeset
250 DicomMap::SetupFindSeriesTemplate(m);
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parents: 226
diff changeset
251 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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parents: 226
diff changeset
252 {
209ca3f6db62 dicom-scu from rest
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diff changeset
253 return;
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
254 }
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parents: 226
diff changeset
255 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_PATIENT_ID);
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parents: 226
diff changeset
256 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_STUDY_INSTANCE_UID);
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parents: 226
diff changeset
257
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parents: 226
diff changeset
258 DicomFindAnswers series;
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parents: 226
diff changeset
259 connection.FindSeries(series, m);
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parents: 226
diff changeset
260
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diff changeset
261 // Loop over the found series
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diff changeset
262 study["Series"] = Json::arrayValue;
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parents: 226
diff changeset
263 for (size_t k = 0; k < series.GetSize(); k++)
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parents: 226
diff changeset
264 {
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parents: 226
diff changeset
265 Json::Value series2(Json::objectValue);
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parents: 226
diff changeset
266 FromDcmtkBridge::ToJson(series2, series.GetAnswer(k));
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parents: 226
diff changeset
267 study["Series"].append(series2);
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parents: 226
diff changeset
268 }
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parents: 226
diff changeset
269
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parents: 226
diff changeset
270 patient["Studies"].append(study);
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
271 }
209ca3f6db62 dicom-scu from rest
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272
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273 result.append(patient);
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274 }
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275
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276 call.GetOutput().AnswerJson(result);
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277 }
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diff changeset
278
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279
485
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280 static bool GetInstancesToExport(std::list<std::string>& instances,
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281 const std::string& remote,
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282 RestApi::PostCall& call)
227
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283 {
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284 RETRIEVE_CONTEXT(call);
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285
402
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286 std::string stripped = Toolbox::StripSpaces(call.GetPostBody());
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287
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288 Json::Value request;
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289 if (Toolbox::IsSHA1(stripped))
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290 {
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291 // This is for compatibility with Orthanc <= 0.5.1.
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292 request = stripped;
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293 }
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294 else if (!call.ParseJsonRequest(request))
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295 {
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296 // Bad JSON request
485
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297 return false;
402
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298 }
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299
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300 if (request.isString())
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301 {
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302 context.GetIndex().LogExportedResource(request.asString(), remote);
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303 context.GetIndex().GetChildInstances(instances, request.asString());
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304 }
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305 else if (request.isArray())
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306 {
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307 for (Json::Value::ArrayIndex i = 0; i < request.size(); i++)
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308 {
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309 if (!request[i].isString())
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310 {
485
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311 return false;
402
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diff changeset
312 }
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313
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314 std::string stripped = Toolbox::StripSpaces(request[i].asString());
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315 if (!Toolbox::IsSHA1(stripped))
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diff changeset
316 {
485
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317 return false;
402
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diff changeset
318 }
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diff changeset
319
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320 context.GetIndex().LogExportedResource(stripped, remote);
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diff changeset
321
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322 std::list<std::string> tmp;
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diff changeset
323 context.GetIndex().GetChildInstances(tmp, stripped);
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diff changeset
324 instances.merge(tmp);
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diff changeset
325 assert(tmp.size() == 0);
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326 }
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diff changeset
327 }
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diff changeset
328 else
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diff changeset
329 {
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diff changeset
330 // Neither a string, nor a list of strings. Bad request.
485
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331 return false;
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332 }
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diff changeset
333
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diff changeset
334 return true;
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diff changeset
335 }
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diff changeset
336
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diff changeset
337
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diff changeset
338 static void DicomStore(RestApi::PostCall& call)
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339 {
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diff changeset
340 RETRIEVE_CONTEXT(call);
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diff changeset
341
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diff changeset
342 std::string remote = call.GetUriComponent("id", "");
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diff changeset
343
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diff changeset
344 std::list<std::string> instances;
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diff changeset
345 if (!GetInstancesToExport(instances, remote, call))
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diff changeset
346 {
402
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diff changeset
347 return;
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diff changeset
348 }
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diff changeset
349
227
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diff changeset
350 DicomUserConnection connection;
231
8098448bd827 export log
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diff changeset
351 ConnectToModality(connection, remote);
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parents: 230
diff changeset
352
402
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diff changeset
353 for (std::list<std::string>::const_iterator
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parents: 399
diff changeset
354 it = instances.begin(); it != instances.end(); it++)
227
209ca3f6db62 dicom-scu from rest
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diff changeset
355 {
485
bdbde1fbfab3 send resources through HTTP
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diff changeset
356 LOG(INFO) << "Sending resource " << *it << " to modality \"" << remote << "\"";
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diff changeset
357
402
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diff changeset
358 std::string dicom;
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parents: 399
diff changeset
359 context.ReadFile(dicom, *it, FileContentType_Dicom);
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parents: 399
diff changeset
360 connection.Store(dicom);
227
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diff changeset
361 }
231
8098448bd827 export log
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diff changeset
362
402
d2c69150a979 bulk storescu
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parents: 399
diff changeset
363 call.GetOutput().AnswerBuffer("{}", "application/json");
227
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parents: 226
diff changeset
364 }
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
365
209ca3f6db62 dicom-scu from rest
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diff changeset
366
209ca3f6db62 dicom-scu from rest
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diff changeset
367
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
368 // System information -------------------------------------------------------
211
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diff changeset
369
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parents: 210
diff changeset
370 static void ServeRoot(RestApi::GetCall& call)
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parents: 210
diff changeset
371 {
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parents: 210
diff changeset
372 call.GetOutput().Redirect("app/explorer.html");
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parents: 210
diff changeset
373 }
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
374
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
375 static void GetSystemInformation(RestApi::GetCall& call)
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
376 {
238
e4148b0ab1d0 statistics URI
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diff changeset
377 Json::Value result = Json::objectValue;
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
378
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
379 result["Version"] = ORTHANC_VERSION;
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
380 result["Name"] = GetGlobalStringParameter("Name", "");
238
e4148b0ab1d0 statistics URI
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diff changeset
381
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parents: 237
diff changeset
382 call.GetOutput().AnswerJson(result);
e4148b0ab1d0 statistics URI
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parents: 237
diff changeset
383 }
227
209ca3f6db62 dicom-scu from rest
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diff changeset
384
238
e4148b0ab1d0 statistics URI
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diff changeset
385 static void GetStatistics(RestApi::GetCall& call)
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diff changeset
386 {
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diff changeset
387 RETRIEVE_CONTEXT(call);
e4148b0ab1d0 statistics URI
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diff changeset
388 Json::Value result = Json::objectValue;
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diff changeset
389 context.GetIndex().ComputeStatistics(result);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
390 call.GetOutput().AnswerJson(result);
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parents:
diff changeset
391 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
392
342
a58a8be26aff generation of random uid in the rest api
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diff changeset
393 static void GenerateUid(RestApi::GetCall& call)
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diff changeset
394 {
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diff changeset
395 std::string level = call.GetArgument("level", "");
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diff changeset
396 if (level == "patient")
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parents: 321
diff changeset
397 {
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
398 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Patient), "text/plain");
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
399 }
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
400 else if (level == "study")
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
401 {
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
402 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Study), "text/plain");
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
403 }
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
404 else if (level == "series")
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
405 {
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
406 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Series), "text/plain");
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
407 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
408 else if (level == "instance")
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
409 {
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
410 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Instance), "text/plain");
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
411 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
412 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
413
418
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
414 static void ExecuteScript(RestApi::PostCall& call)
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
415 {
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
416 std::string result;
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
417 RETRIEVE_CONTEXT(call);
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
418 context.GetLuaContext().Execute(result, call.GetPostBody());
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
419 call.GetOutput().AnswerBuffer(result, "text/plain");
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
420 }
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
421
446
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
422 static void GetNowIsoString(RestApi::GetCall& call)
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
423 {
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
424 call.GetOutput().AnswerBuffer(Toolbox::GetNowIsoString(), "text/plain");
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
425 }
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
426
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
427
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
428
418
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
429
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
430
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
431
211
b7aea293b965 list of resources
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diff changeset
432 // List all the patients, studies, series or instances ----------------------
b7aea293b965 list of resources
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diff changeset
433
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
434 template <enum ResourceType resourceType>
b7aea293b965 list of resources
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diff changeset
435 static void ListResources(RestApi::GetCall& call)
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
436 {
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
437 RETRIEVE_CONTEXT(call);
b7aea293b965 list of resources
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parents: 210
diff changeset
438
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
439 Json::Value result;
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
440 context.GetIndex().GetAllUuids(result, resourceType);
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
441 call.GetOutput().AnswerJson(result);
b7aea293b965 list of resources
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parents: 210
diff changeset
442 }
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
443
212
f276b175dcaf delete resources
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diff changeset
444 template <enum ResourceType resourceType>
f276b175dcaf delete resources
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diff changeset
445 static void GetSingleResource(RestApi::GetCall& call)
f276b175dcaf delete resources
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diff changeset
446 {
f276b175dcaf delete resources
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parents: 211
diff changeset
447 RETRIEVE_CONTEXT(call);
f276b175dcaf delete resources
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diff changeset
448
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
449 Json::Value result;
f276b175dcaf delete resources
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diff changeset
450 if (context.GetIndex().LookupResource(result, call.GetUriComponent("id", ""), resourceType))
f276b175dcaf delete resources
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parents: 211
diff changeset
451 {
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
452 call.GetOutput().AnswerJson(result);
f276b175dcaf delete resources
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parents: 211
diff changeset
453 }
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
454 }
f276b175dcaf delete resources
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parents: 211
diff changeset
455
f276b175dcaf delete resources
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parents: 211
diff changeset
456 template <enum ResourceType resourceType>
f276b175dcaf delete resources
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diff changeset
457 static void DeleteSingleResource(RestApi::DeleteCall& call)
f276b175dcaf delete resources
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parents: 211
diff changeset
458 {
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
459 RETRIEVE_CONTEXT(call);
f276b175dcaf delete resources
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diff changeset
460
f276b175dcaf delete resources
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parents: 211
diff changeset
461 Json::Value result;
f276b175dcaf delete resources
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parents: 211
diff changeset
462 if (context.GetIndex().DeleteResource(result, call.GetUriComponent("id", ""), resourceType))
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
463 {
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
464 call.GetOutput().AnswerJson(result);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
465 }
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
466 }
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
467
211
b7aea293b965 list of resources
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diff changeset
468
248
2442033911d6 creation of zip files
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parents: 238
diff changeset
469 // Download of ZIP files ----------------------------------------------------
2442033911d6 creation of zip files
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parents: 238
diff changeset
470
250
f23318b11b39 creation of zip files
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diff changeset
471
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
472 static std::string GetDirectoryNameInArchive(const Json::Value& resource,
f23318b11b39 creation of zip files
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diff changeset
473 ResourceType resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
474 {
f23318b11b39 creation of zip files
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parents: 249
diff changeset
475 switch (resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
476 {
f23318b11b39 creation of zip files
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parents: 249
diff changeset
477 case ResourceType_Patient:
f23318b11b39 creation of zip files
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parents: 249
diff changeset
478 {
f23318b11b39 creation of zip files
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parents: 249
diff changeset
479 std::string p = resource["MainDicomTags"]["PatientID"].asString();
f23318b11b39 creation of zip files
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parents: 249
diff changeset
480 std::string n = resource["MainDicomTags"]["PatientName"].asString();
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
481 return p + " " + n;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
482 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
483
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
484 case ResourceType_Study:
253
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
485 {
250
f23318b11b39 creation of zip files
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parents: 249
diff changeset
486 return resource["MainDicomTags"]["StudyDescription"].asString();
253
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
487 }
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
488
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
489 case ResourceType_Series:
253
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
490 {
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
491 std::string d = resource["MainDicomTags"]["SeriesDescription"].asString();
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
492 std::string m = resource["MainDicomTags"]["Modality"].asString();
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
493 return m + " " + d;
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
494 }
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
495
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
496 default:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
497 throw OrthancException(ErrorCode_InternalError);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
498 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
499 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
500
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
501 static bool CreateRootDirectoryInArchive(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
502 ServerContext& context,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
503 const Json::Value& resource,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
504 ResourceType resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
505 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
506 if (resourceType == ResourceType_Patient)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
507 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
508 return true;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
509 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
510
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
511 ResourceType parentType = GetParentResourceType(resourceType);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
512 Json::Value parent;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
513
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
514 switch (resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
515 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
516 case ResourceType_Study:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
517 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
518 if (!context.GetIndex().LookupResource(parent, resource["ParentPatient"].asString(), parentType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
519 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
520 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
521 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
522
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
523 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
524 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
525
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
526 case ResourceType_Series:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
527 if (!context.GetIndex().LookupResource(parent, resource["ParentStudy"].asString(), parentType) ||
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
528 !CreateRootDirectoryInArchive(writer, context, parent, parentType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
529 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
530 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
531 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
532 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
533
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
534 default:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
535 throw OrthancException(ErrorCode_NotImplemented);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
536 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
537
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
538 writer.OpenDirectory(GetDirectoryNameInArchive(parent, parentType).c_str());
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
539 return true;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
540 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
541
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
542 static bool ArchiveInstance(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
543 ServerContext& context,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
544 const std::string& instancePublicId)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
545 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
546 Json::Value instance;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
547 if (!context.GetIndex().LookupResource(instance, instancePublicId, ResourceType_Instance))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
548 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
549 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
550 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
551
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
552 std::string filename = instance["MainDicomTags"]["SOPInstanceUID"].asString() + ".dcm";
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
553 writer.OpenFile(filename.c_str());
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
554
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
555 std::string dicom;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
556 context.ReadFile(dicom, instancePublicId, FileContentType_Dicom);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
557 writer.Write(dicom);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
558
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
559 return true;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
560 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
561
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
562 static bool ArchiveInternal(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
563 ServerContext& context,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
564 const std::string& publicId,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
565 ResourceType resourceType,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
566 bool isFirstLevel)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
567 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
568 Json::Value resource;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
569 if (!context.GetIndex().LookupResource(resource, publicId, resourceType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
570 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
571 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
572 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
573
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
574 if (isFirstLevel &&
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
575 !CreateRootDirectoryInArchive(writer, context, resource, resourceType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
576 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
577 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
578 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
579
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
580 writer.OpenDirectory(GetDirectoryNameInArchive(resource, resourceType).c_str());
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
581
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
582 switch (resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
583 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
584 case ResourceType_Patient:
299
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
585 for (Json::Value::ArrayIndex i = 0; i < resource["Studies"].size(); i++)
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
586 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
587 std::string studyId = resource["Studies"][i].asString();
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
588 if (!ArchiveInternal(writer, context, studyId, ResourceType_Study, false))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
589 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
590 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
591 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
592 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
593 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
594
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
595 case ResourceType_Study:
299
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
596 for (Json::Value::ArrayIndex i = 0; i < resource["Series"].size(); i++)
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
597 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
598 std::string seriesId = resource["Series"][i].asString();
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
599 if (!ArchiveInternal(writer, context, seriesId, ResourceType_Series, false))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
600 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
601 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
602 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
603 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
604 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
605
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
606 case ResourceType_Series:
299
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
607 for (Json::Value::ArrayIndex i = 0; i < resource["Instances"].size(); i++)
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
608 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
609 if (!ArchiveInstance(writer, context, resource["Instances"][i].asString()))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
610 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
611 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
612 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
613 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
614 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
615
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
616 default:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
617 throw OrthancException(ErrorCode_InternalError);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
618 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
619
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
620 writer.CloseDirectory();
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
621 return true;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
622 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
623
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
624 template <enum ResourceType resourceType>
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
625 static void GetArchive(RestApi::GetCall& call)
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
626 {
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
627 RETRIEVE_CONTEXT(call);
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
628
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
629 // Create a RAII for the temporary file to manage the ZIP file
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
630 Toolbox::TemporaryFile tmp;
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
631 std::string id = call.GetUriComponent("id", "");
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
632
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
633 {
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
634 // Create a ZIP writer
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
635 HierarchicalZipWriter writer(tmp.GetPath().c_str());
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
636
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
637 // Store the requested resource into the ZIP
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
638 if (!ArchiveInternal(writer, context, id, resourceType, true))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
639 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
640 return;
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
641 }
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
642 }
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
643
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
644 // Prepare the sending of the ZIP file
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
645 FilesystemHttpSender sender(tmp.GetPath().c_str());
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
646 sender.SetContentType("application/zip");
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
647 sender.SetDownloadFilename(id + ".zip");
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
648
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
649 // Send the ZIP
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
650 call.GetOutput().AnswerFile(sender);
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
651
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
652 // The temporary file is automatically removed thanks to the RAII
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
653 }
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
654
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
655
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
656 // Changes API --------------------------------------------------------------
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
657
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
658 static void GetSinceAndLimit(int64_t& since,
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
659 unsigned int& limit,
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
660 bool& last,
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
661 const RestApi::GetCall& call)
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
662 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
663 static const unsigned int MAX_RESULTS = 100;
237
16a4ac70bd8a last change and export
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parents: 233
diff changeset
664
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
665 if (call.HasArgument("last"))
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
666 {
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
667 last = true;
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
668 return;
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
669 }
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
670
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
671 last = false;
16a4ac70bd8a last change and export
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parents: 233
diff changeset
672
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
673 try
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
674 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
675 since = boost::lexical_cast<int64_t>(call.GetArgument("since", "0"));
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
676 limit = boost::lexical_cast<unsigned int>(call.GetArgument("limit", "0"));
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
677 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
678 catch (boost::bad_lexical_cast)
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
679 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
680 return;
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
681 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
682
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
683 if (limit == 0 || limit > MAX_RESULTS)
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
684 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
685 limit = MAX_RESULTS;
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
686 }
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
687 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
688
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
689 static void GetChanges(RestApi::GetCall& call)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
690 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
691 RETRIEVE_CONTEXT(call);
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
692
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
693 //std::string filter = GetArgument(getArguments, "filter", "");
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
694 int64_t since;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
695 unsigned int limit;
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
696 bool last;
16a4ac70bd8a last change and export
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parents: 233
diff changeset
697 GetSinceAndLimit(since, limit, last, call);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
698
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
699 Json::Value result;
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
700 if ((!last && context.GetIndex().GetChanges(result, since, limit)) ||
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
701 ( last && context.GetIndex().GetLastChange(result)))
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
702 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
703 call.GetOutput().AnswerJson(result);
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
704 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
705 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
706
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
707
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
708 static void DeleteChanges(RestApi::DeleteCall& call)
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
709 {
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
710 RETRIEVE_CONTEXT(call);
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
711 context.GetIndex().DeleteChanges();
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
712 call.GetOutput().AnswerBuffer("", "text/plain");
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
713 }
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
714
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
715
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
716 static void GetExports(RestApi::GetCall& call)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
717 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
718 RETRIEVE_CONTEXT(call);
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
719
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
720 int64_t since;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
721 unsigned int limit;
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
722 bool last;
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
723 GetSinceAndLimit(since, limit, last, call);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
724
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
725 Json::Value result;
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
726 if ((!last && context.GetIndex().GetExportedResources(result, since, limit)) ||
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
727 ( last && context.GetIndex().GetLastExportedResource(result)))
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
728 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
729 call.GetOutput().AnswerJson(result);
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
730 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
731 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
732
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
733
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
734 static void DeleteExports(RestApi::DeleteCall& call)
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
735 {
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
736 RETRIEVE_CONTEXT(call);
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
737 context.GetIndex().DeleteExportedResources();
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
738 call.GetOutput().AnswerBuffer("", "text/plain");
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
739 }
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
740
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
741
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
742 // Get information about a single patient -----------------------------------
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
743
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
744 static void IsProtectedPatient(RestApi::GetCall& call)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
745 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
746 RETRIEVE_CONTEXT(call);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
747 std::string publicId = call.GetUriComponent("id", "");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
748 bool isProtected = context.GetIndex().IsProtectedPatient(publicId);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
749 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", "text/plain");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
750 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
751
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
752
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
753 static void SetPatientProtection(RestApi::PutCall& call)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
754 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
755 RETRIEVE_CONTEXT(call);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
756 std::string publicId = call.GetUriComponent("id", "");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
757 std::string s = Toolbox::StripSpaces(call.GetPutBody());
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
758
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
759 if (s == "0")
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
760 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
761 context.GetIndex().SetProtectedPatient(publicId, false);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
762 call.GetOutput().AnswerBuffer("", "text/plain");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
763 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
764 else if (s == "1")
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
765 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
766 context.GetIndex().SetProtectedPatient(publicId, true);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
767 call.GetOutput().AnswerBuffer("", "text/plain");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
768 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
769 else
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
770 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
771 // Bad request
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
772 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
773 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
774
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
775
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
776 // Get information about a single instance ----------------------------------
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
777
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
778 static void GetInstanceFile(RestApi::GetCall& call)
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
779 {
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
780 RETRIEVE_CONTEXT(call);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
781
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
782 std::string publicId = call.GetUriComponent("id", "");
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
783 context.AnswerFile(call.GetOutput(), publicId, FileContentType_Dicom);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
784 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
785
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
786
483
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
787 static void ExportInstanceFile(RestApi::PostCall& call)
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
788 {
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
789 RETRIEVE_CONTEXT(call);
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
790
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
791 std::string publicId = call.GetUriComponent("id", "");
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
792
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
793 std::string dicom;
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
794 context.ReadFile(dicom, publicId, FileContentType_Dicom);
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
795
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
796 Toolbox::WriteFile(dicom, call.GetPostBody());
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
797
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
798 call.GetOutput().AnswerBuffer("{}", "application/json");
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
799 }
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
800
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
801
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
802 template <bool simplify>
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
803 static void GetInstanceTags(RestApi::GetCall& call)
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
804 {
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
805 RETRIEVE_CONTEXT(call);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
806
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
807 std::string publicId = call.GetUriComponent("id", "");
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
808
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
809 Json::Value full;
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
810 context.ReadJson(full, publicId);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
811
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
812 if (simplify)
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
813 {
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
814 Json::Value simplified;
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
815 SimplifyTags(simplified, full);
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
816 call.GetOutput().AnswerJson(simplified);
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
817 }
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
818 else
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
819 {
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
820 call.GetOutput().AnswerJson(full);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
821 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
822 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
823
214
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
824
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
825 static void ListFrames(RestApi::GetCall& call)
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
826 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
827 RETRIEVE_CONTEXT(call);
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
828
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
829 Json::Value instance;
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
830 if (context.GetIndex().LookupResource(instance, call.GetUriComponent("id", ""), ResourceType_Instance))
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
831 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
832 unsigned int numberOfFrames = 1;
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
833
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
834 try
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
835 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
836 Json::Value tmp = instance["MainDicomTags"]["NumberOfFrames"];
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
837 numberOfFrames = boost::lexical_cast<unsigned int>(tmp.asString());
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
838 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
839 catch (...)
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
840 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
841 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
842
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
843 Json::Value result = Json::arrayValue;
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
844 for (unsigned int i = 0; i < numberOfFrames; i++)
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
845 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
846 result.append(i);
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
847 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
848
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
849 call.GetOutput().AnswerJson(result);
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
850 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
851 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
852
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
853
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
854 template <enum ImageExtractionMode mode>
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
855 static void GetImage(RestApi::GetCall& call)
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
856 {
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
857 RETRIEVE_CONTEXT(call);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
858
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
859 std::string frameId = call.GetUriComponent("frame", "0");
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
860
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
861 unsigned int frame;
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
862 try
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
863 {
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
864 frame = boost::lexical_cast<unsigned int>(frameId);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
865 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
866 catch (boost::bad_lexical_cast)
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
867 {
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
868 return;
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
869 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
870
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
871 std::string publicId = call.GetUriComponent("id", "");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
872 std::string dicomContent, png;
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
873 context.ReadFile(dicomContent, publicId, FileContentType_Dicom);
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
874
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
875 try
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
876 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
877 FromDcmtkBridge::ExtractPngImage(png, dicomContent, frame, mode);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
878 call.GetOutput().AnswerBuffer(png, "image/png");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
879 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
880 catch (OrthancException& e)
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
881 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
882 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange)
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
883 {
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
884 // The frame number is out of the range for this DICOM
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
885 // instance, the resource is not existent
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
886 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
887 else
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
888 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
889 std::string root = "";
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
890 for (size_t i = 1; i < call.GetFullUri().size(); i++)
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
891 {
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
892 root += "../";
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
893 }
218
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
894
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
895 call.GetOutput().Redirect(root + "app/images/unsupported.png");
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
896 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
897 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
898 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
899
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
900
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
901 // Upload of DICOM files through HTTP ---------------------------------------
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
902
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
903 static void UploadDicomFile(RestApi::PostCall& call)
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
904 {
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
905 RETRIEVE_CONTEXT(call);
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
906
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
907 const std::string& postData = call.GetPostBody();
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
908 if (postData.size() == 0)
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
909 {
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
910 return;
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
911 }
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
912
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
913 LOG(INFO) << "Receiving a DICOM file of " << postData.size() << " bytes through HTTP";
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
914
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
915 std::string publicId;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
916 StoreStatus status = context.Store(publicId, postData);
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
917 Json::Value result = Json::objectValue;
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
918
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
919 if (status != StoreStatus_Failure)
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
920 {
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
921 result["ID"] = publicId;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
922 result["Path"] = GetBasePath(ResourceType_Instance, publicId);
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
923 }
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
924
434
ccf3a0a43dac EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 418
diff changeset
925 result["Status"] = EnumerationToString(status);
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
926 call.GetOutput().AnswerJson(result);
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
927 }
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
928
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
929
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
930
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
931 // DICOM bridge -------------------------------------------------------------
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
932
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
933 static bool IsExistingModality(const OrthancRestApi::SetOfStrings& modalities,
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
934 const std::string& id)
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
935 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
936 return modalities.find(id) != modalities.end();
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
937 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
938
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
939 static void ListModalities(RestApi::GetCall& call)
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
940 {
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
941 RETRIEVE_MODALITIES(call);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
942
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
943 Json::Value result = Json::arrayValue;
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
944 for (OrthancRestApi::SetOfStrings::const_iterator
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
945 it = modalities.begin(); it != modalities.end(); it++)
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
946 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
947 result.append(*it);
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
948 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
949
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
950 call.GetOutput().AnswerJson(result);
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
951 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
952
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
953
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
954 static void ListModalityOperations(RestApi::GetCall& call)
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
955 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
956 RETRIEVE_MODALITIES(call);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
957
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
958 std::string id = call.GetUriComponent("id", "");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
959 if (IsExistingModality(modalities, id))
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
960 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
961 Json::Value result = Json::arrayValue;
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
962 result.append("find-patient");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
963 result.append("find-study");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
964 result.append("find-series");
499
7db04aa5104f instance-level find scu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 485
diff changeset
965 result.append("find-instance");
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
966 result.append("find");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
967 result.append("store");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
968 call.GetOutput().AnswerJson(result);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
969 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
970 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
971
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
972
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
973
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
974 // Raw access to the DICOM tags of an instance ------------------------------
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
975
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
976 static void GetRawContent(RestApi::GetCall& call)
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
977 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 314
diff changeset
978 boost::mutex::scoped_lock lock(cacheMutex_);
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
979
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
980 RETRIEVE_CONTEXT(call);
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
981 std::string id = call.GetUriComponent("id", "");
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
982 ParsedDicomFile& dicom = context.GetDicomFile(id);
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
983 dicom.SendPathValue(call.GetOutput(), call.GetTrailingUri());
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
984 }
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
985
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
986
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
987
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
988 // Modification of DICOM instances ------------------------------------------
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
989
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
990 namespace
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
991 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
992 typedef std::set<DicomTag> Removals;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
993 typedef std::map<DicomTag, std::string> Replacements;
350
8031f9cfe7fe removal of old code
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 349
diff changeset
994 typedef std::map< std::pair<DicomRootLevel, std::string>, std::string> UidMap;
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
995 }
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
996
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
997 static void ReplaceInstanceInternal(ParsedDicomFile& toModify,
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
998 const Removals& removals,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
999 const Replacements& replacements,
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1000 DicomReplaceMode mode,
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1001 bool removePrivateTags)
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1002 {
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1003 if (removePrivateTags)
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1004 {
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1005 toModify.RemovePrivateTags();
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1006 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1007
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1008 for (Removals::const_iterator it = removals.begin();
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1009 it != removals.end(); it++)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1010 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1011 toModify.Remove(*it);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1012 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1013
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1014 for (Replacements::const_iterator it = replacements.begin();
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1015 it != replacements.end(); it++)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1016 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1017 toModify.Replace(it->first, it->second, mode);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1018 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1019
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1020 // A new SOP instance UID is automatically generated
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1021 std::string instanceUid = FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Instance);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1022 toModify.Replace(DICOM_TAG_SOP_INSTANCE_UID, instanceUid, DicomReplaceMode_InsertIfAbsent);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1023 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1024
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1025
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1026 static void ParseRemovals(Removals& target,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1027 const Json::Value& removals)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1028 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1029 if (!removals.isArray())
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1030 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1031 throw OrthancException(ErrorCode_BadRequest);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1032 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1033
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1034 for (Json::Value::ArrayIndex i = 0; i < removals.size(); i++)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1035 {
357
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1036 std::string name = removals[i].asString();
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1037 DicomTag tag = FromDcmtkBridge::ParseTag(name);
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1038 target.insert(tag);
357
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1039
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1040 VLOG(1) << "Removal: " << name << " " << tag << std::endl;
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1041 }
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1042 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1043
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1044
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1045 static void ParseReplacements(Replacements& target,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1046 const Json::Value& replacements)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1047 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1048 if (!replacements.isObject())
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1049 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1050 throw OrthancException(ErrorCode_BadRequest);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1051 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1052
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1053 Json::Value::Members members = replacements.getMemberNames();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1054 for (size_t i = 0; i < members.size(); i++)
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1055 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1056 const std::string& name = members[i];
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1057 std::string value = replacements[name].asString();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1058
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1059 DicomTag tag = FromDcmtkBridge::ParseTag(name);
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1060 target[tag] = value;
357
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1061
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1062 VLOG(1) << "Replacement: " << name << " " << tag << " == " << value << std::endl;
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1063 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1064 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1065
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1066
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1067 static std::string GeneratePatientName(ServerContext& context)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1068 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1069 uint64_t seq = context.GetIndex().IncrementGlobalSequence(GlobalProperty_AnonymizationSequence);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1070 return "Anonymized" + boost::lexical_cast<std::string>(seq);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1071 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1072
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1073
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1074 static void SetupAnonymization(Removals& removals,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1075 Replacements& replacements)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1076 {
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1077 // This is Table E.1-1 from PS 3.15-2008 - DICOM Part 15: Security and System Management Profiles
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1078 removals.insert(DicomTag(0x0008, 0x0014)); // Instance Creator UID
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1079 //removals.insert(DicomTag(0x0008, 0x0018)); // SOP Instance UID => set by ReplaceInstanceInternal()
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1080 removals.insert(DicomTag(0x0008, 0x0050)); // Accession Number
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1081 removals.insert(DicomTag(0x0008, 0x0080)); // Institution Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1082 removals.insert(DicomTag(0x0008, 0x0081)); // Institution Address
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1083 removals.insert(DicomTag(0x0008, 0x0090)); // Referring Physician's Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1084 removals.insert(DicomTag(0x0008, 0x0092)); // Referring Physician's Address
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1085 removals.insert(DicomTag(0x0008, 0x0094)); // Referring Physician's Telephone Numbers
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1086 removals.insert(DicomTag(0x0008, 0x1010)); // Station Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1087 removals.insert(DicomTag(0x0008, 0x1030)); // Study Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1088 removals.insert(DicomTag(0x0008, 0x103e)); // Series Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1089 removals.insert(DicomTag(0x0008, 0x1040)); // Institutional Department Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1090 removals.insert(DicomTag(0x0008, 0x1048)); // Physician(s) of Record
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1091 removals.insert(DicomTag(0x0008, 0x1050)); // Performing Physicians' Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1092 removals.insert(DicomTag(0x0008, 0x1060)); // Name of Physician(s) Reading Study
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1093 removals.insert(DicomTag(0x0008, 0x1070)); // Operators' Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1094 removals.insert(DicomTag(0x0008, 0x1080)); // Admitting Diagnoses Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1095 removals.insert(DicomTag(0x0008, 0x1155)); // Referenced SOP Instance UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1096 removals.insert(DicomTag(0x0008, 0x2111)); // Derivation Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1097 removals.insert(DicomTag(0x0010, 0x0010)); // Patient's Name
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1098 //removals.insert(DicomTag(0x0010, 0x0020)); // Patient ID => cf. below (*)
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1099 removals.insert(DicomTag(0x0010, 0x0030)); // Patient's Birth Date
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1100 removals.insert(DicomTag(0x0010, 0x0032)); // Patient's Birth Time
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1101 removals.insert(DicomTag(0x0010, 0x0040)); // Patient's Sex
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1102 removals.insert(DicomTag(0x0010, 0x1000)); // Other Patient Ids
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1103 removals.insert(DicomTag(0x0010, 0x1001)); // Other Patient Names
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1104 removals.insert(DicomTag(0x0010, 0x1010)); // Patient's Age
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1105 removals.insert(DicomTag(0x0010, 0x1020)); // Patient's Size
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1106 removals.insert(DicomTag(0x0010, 0x1030)); // Patient's Weight
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1107 removals.insert(DicomTag(0x0010, 0x1090)); // Medical Record Locator
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1108 removals.insert(DicomTag(0x0010, 0x2160)); // Ethnic Group
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1109 removals.insert(DicomTag(0x0010, 0x2180)); // Occupation
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1110 removals.insert(DicomTag(0x0010, 0x21b0)); // Additional Patient's History
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1111 removals.insert(DicomTag(0x0010, 0x4000)); // Patient Comments
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1112 removals.insert(DicomTag(0x0018, 0x1000)); // Device Serial Number
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1113 removals.insert(DicomTag(0x0018, 0x1030)); // Protocol Name
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1114 //removals.insert(DicomTag(0x0020, 0x000d)); // Study Instance UID => cf. below (*)
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1115 //removals.insert(DicomTag(0x0020, 0x000e)); // Series Instance UID => cf. below (*)
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1116 removals.insert(DicomTag(0x0020, 0x0010)); // Study ID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1117 removals.insert(DicomTag(0x0020, 0x0052)); // Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1118 removals.insert(DicomTag(0x0020, 0x0200)); // Synchronization Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1119 removals.insert(DicomTag(0x0020, 0x4000)); // Image Comments
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1120 removals.insert(DicomTag(0x0040, 0x0275)); // Request Attributes Sequence
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1121 removals.insert(DicomTag(0x0040, 0xa124)); // UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1122 removals.insert(DicomTag(0x0040, 0xa730)); // Content Sequence
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1123 removals.insert(DicomTag(0x0088, 0x0140)); // Storage Media File-set UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1124 removals.insert(DicomTag(0x3006, 0x0024)); // Referenced Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1125 removals.insert(DicomTag(0x3006, 0x00c2)); // Related Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1126
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1127 /**
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1128 * (*) Patient ID, Study Instance UID and Series Instance UID
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1129 * are modified by "AnonymizeInstance()" if anonymizing a single
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1130 * instance, or by "RetrieveMappedUid()" if anonymizing a
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1131 * patient/study/series.
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1132 **/
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1133
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1134
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1135 // Some more removals (from the experience of DICOM files at the CHU of Liege)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1136 removals.insert(DicomTag(0x0010, 0x1040)); // Patient's Address
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1137 removals.insert(DicomTag(0x0032, 0x1032)); // Requesting Physician
463
005aaeb63414 anonymization of PatientTelephoneNumbers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 446
diff changeset
1138 removals.insert(DicomTag(0x0010, 0x2154)); // PatientTelephoneNumbers
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1139
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1140 // Set the DeidentificationMethod tag
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1141 replacements.insert(std::make_pair(DicomTag(0x0012, 0x0063), "Orthanc " ORTHANC_VERSION " - PS 3.15-2008 Table E.1-1"));
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1142
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1143 // Set the PatientIdentityRemoved tag
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1144 replacements.insert(std::make_pair(DicomTag(0x0012, 0x0062), "YES"));
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1145 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1146
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1147
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1148 static bool ParseModifyRequest(Removals& removals,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1149 Replacements& replacements,
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1150 bool& removePrivateTags,
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1151 const RestApi::PostCall& call)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1152 {
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1153 removePrivateTags = false;
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1154 Json::Value request;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1155 if (call.ParseJsonRequest(request) &&
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1156 request.isObject())
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1157 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1158 Json::Value removalsPart = Json::arrayValue;
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1159 Json::Value replacementsPart = Json::objectValue;
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1160
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1161 if (request.isMember("Remove"))
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1162 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1163 removalsPart = request["Remove"];
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1164 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1165
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1166 if (request.isMember("Replace"))
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1167 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1168 replacementsPart = request["Replace"];
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1169 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1170
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1171 if (request.isMember("RemovePrivateTags"))
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1172 {
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1173 removePrivateTags = true;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1174 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1175
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1176 ParseRemovals(removals, removalsPart);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1177 ParseReplacements(replacements, replacementsPart);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1178
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1179 return true;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1180 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1181 else
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1182 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1183 return false;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1184 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1185 }
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1186
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1187
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1188 static bool ParseAnonymizationRequest(Removals& removals,
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1189 Replacements& replacements,
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1190 bool& removePrivateTags,
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1191 RestApi::PostCall& call)
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1192 {
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1193 RETRIEVE_CONTEXT(call);
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1194
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1195 removePrivateTags = true;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1196
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1197 Json::Value request;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1198 if (call.ParseJsonRequest(request) &&
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1199 request.isObject())
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1200 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1201 Json::Value keepPart = Json::arrayValue;
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1202 Json::Value removalsPart = Json::arrayValue;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1203 Json::Value replacementsPart = Json::objectValue;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1204
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1205 if (request.isMember("Keep"))
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1206 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1207 keepPart = request["Keep"];
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1208 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1209
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1210 if (request.isMember("KeepPrivateTags"))
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1211 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1212 removePrivateTags = false;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1213 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1214
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1215 if (request.isMember("Replace"))
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1216 {
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1217 replacementsPart = request["Replace"];
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1218 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1219
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1220 Removals toKeep;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1221 ParseRemovals(toKeep, keepPart);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1222
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1223 SetupAnonymization(removals, replacements);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1224
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1225 for (Removals::iterator it = toKeep.begin(); it != toKeep.end(); it++)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1226 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1227 removals.erase(*it);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1228 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1229
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1230 Removals additionalRemovals;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1231 ParseRemovals(additionalRemovals, removalsPart);
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1232
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1233 for (Removals::iterator it = additionalRemovals.begin();
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1234 it != additionalRemovals.end(); it++)
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1235 {
321
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1236 removals.insert(*it);
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1237 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1238
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1239 ParseReplacements(replacements, replacementsPart);
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1240
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1241 // Generate random Patient's Name if none is specified
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1242 if (replacements.find(DicomTag(0x0010, 0x0010)) == replacements.end())
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1243 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1244 replacements.insert(std::make_pair(DicomTag(0x0010, 0x0010), GeneratePatientName(context)));
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1245 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1246
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1247 return true;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1248 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1249 else
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1250 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1251 return false;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1252 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1253 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1254
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1255
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1256 static void AnonymizeOrModifyInstance(Removals& removals,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1257 Replacements& replacements,
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1258 bool removePrivateTags,
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1259 RestApi::PostCall& call)
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1260 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 314
diff changeset
1261 boost::mutex::scoped_lock lock(cacheMutex_);
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1262 RETRIEVE_CONTEXT(call);
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1263
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1264 std::string id = call.GetUriComponent("id", "");
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1265 ParsedDicomFile& dicom = context.GetDicomFile(id);
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1266
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1267 std::auto_ptr<ParsedDicomFile> modified(dicom.Clone());
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1268 ReplaceInstanceInternal(*modified, removals, replacements, DicomReplaceMode_InsertIfAbsent, removePrivateTags);
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1269 modified->Answer(call.GetOutput());
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1270 }
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1271
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1272
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1273 static bool RetrieveMappedUid(ParsedDicomFile& dicom,
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1274 DicomRootLevel level,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1275 Replacements& replacements,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1276 UidMap& uidMap)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1277 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1278 std::auto_ptr<DicomTag> tag;
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1279
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1280 switch (level)
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1281 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1282 case DicomRootLevel_Series:
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1283 tag.reset(new DicomTag(DICOM_TAG_SERIES_INSTANCE_UID));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1284 break;
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1285
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1286 case DicomRootLevel_Study:
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1287 tag.reset(new DicomTag(DICOM_TAG_STUDY_INSTANCE_UID));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1288 break;
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1289
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1290 case DicomRootLevel_Patient:
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1291 tag.reset(new DicomTag(DICOM_TAG_PATIENT_ID));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1292 break;
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1293
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1294 default:
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1295 throw OrthancException(ErrorCode_InternalError);
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1296 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1297
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1298 std::string original;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1299 if (!dicom.GetTagValue(original, *tag))
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1300 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1301 throw OrthancException(ErrorCode_InternalError);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1302 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1303
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1304 std::string mapped;
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1305 bool isNew;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1306
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1307 UidMap::const_iterator previous = uidMap.find(std::make_pair(level, original));
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1308 if (previous == uidMap.end())
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1309 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1310 mapped = FromDcmtkBridge::GenerateUniqueIdentifier(level);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1311 uidMap.insert(std::make_pair(std::make_pair(level, original), mapped));
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1312 isNew = true;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1313 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1314 else
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1315 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1316 mapped = previous->second;
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1317 isNew = false;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1318 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1319
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1320 replacements[*tag] = mapped;
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1321 return isNew;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1322 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1323
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1324
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1325 static void AnonymizeOrModifyResource(bool isAnonymization,
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1326 Removals& removals,
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1327 Replacements& replacements,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1328 bool removePrivateTags,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1329 MetadataType metadataType,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1330 ChangeType changeType,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1331 ResourceType resourceType,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1332 RestApi::PostCall& call)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1333 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1334 typedef std::list<std::string> Instances;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1335
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1336 bool isFirst = true;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1337 Json::Value result(Json::objectValue);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1338
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1339 boost::mutex::scoped_lock lock(cacheMutex_);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1340 RETRIEVE_CONTEXT(call);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1341
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1342 Instances instances;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1343 std::string id = call.GetUriComponent("id", "");
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1344 context.GetIndex().GetChildInstances(instances, id);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1345
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1346 if (instances.size() == 0)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1347 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1348 return;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1349 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1350
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1351
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1352 /**
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1353 * Loop over all the instances of the resource.
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1354 **/
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1355
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1356 UidMap uidMap;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1357 for (Instances::const_iterator it = instances.begin();
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1358 it != instances.end(); it++)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1359 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1360 LOG(INFO) << "Modifying instance " << *it;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1361 ParsedDicomFile& original = context.GetDicomFile(*it);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1362
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1363 DicomInstanceHasher originalHasher = original.GetHasher();
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1364
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1365 if (isFirst && !isAnonymization)
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1366 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1367 // If modifying a study or a series, keep the original patient ID.
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1368 std::string patientId = originalHasher.GetPatientId();
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1369 uidMap[std::make_pair(DicomRootLevel_Patient, patientId)] = patientId;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1370 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1371
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1372 bool isNewSeries = RetrieveMappedUid(original, DicomRootLevel_Series, replacements, uidMap);
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1373 bool isNewStudy = RetrieveMappedUid(original, DicomRootLevel_Study, replacements, uidMap);
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1374 bool isNewPatient = RetrieveMappedUid(original, DicomRootLevel_Patient, replacements, uidMap);
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1375
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1376
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1377 /**
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1378 * Compute the resulting DICOM instance and store it into the Orthanc store.
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1379 **/
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1380
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1381 std::auto_ptr<ParsedDicomFile> modified(original.Clone());
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1382 ReplaceInstanceInternal(*modified, removals, replacements, DicomReplaceMode_InsertIfAbsent, removePrivateTags);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1383
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1384 std::string modifiedInstance;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1385 if (context.Store(modifiedInstance, modified->GetDicom()) != StoreStatus_Success)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1386 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1387 LOG(ERROR) << "Error while storing a modified instance " << *it;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1388 return;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1389 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1390
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1391
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1392 /**
443
be93b666ed79 link anonymized to original resource in OrthancExplorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1393 * Record metadata information (AnonymizedFrom/ModifiedFrom).
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1394 **/
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1395
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1396 DicomInstanceHasher modifiedHasher = modified->GetHasher();
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1397
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1398 if (isNewSeries)
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1399 {
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1400 context.GetIndex().SetMetadata(modifiedHasher.HashSeries(),
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1401 metadataType, originalHasher.HashSeries());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1402 }
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1403
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1404 if (isNewStudy)
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1405 {
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1406 context.GetIndex().SetMetadata(modifiedHasher.HashStudy(),
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1407 metadataType, originalHasher.HashStudy());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1408 }
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1409
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1410 if (isNewPatient)
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1411 {
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1412 context.GetIndex().SetMetadata(modifiedHasher.HashPatient(),
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1413 metadataType, originalHasher.HashPatient());
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1414 }
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1415
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1416 assert(*it == originalHasher.HashInstance());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1417 assert(modifiedInstance == modifiedHasher.HashInstance());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1418 context.GetIndex().SetMetadata(modifiedInstance, metadataType, *it);
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1419
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1420
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1421 /**
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1422 * Compute the JSON object that is returned by the REST call.
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1423 **/
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1424
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1425 if (isFirst)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1426 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1427 std::string newId;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1428
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1429 switch (resourceType)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1430 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1431 case ResourceType_Series:
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1432 newId = modifiedHasher.HashSeries();
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1433 break;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1434
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1435 case ResourceType_Study:
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1436 newId = modifiedHasher.HashStudy();
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1437 break;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1438
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1439 case ResourceType_Patient:
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1440 newId = modifiedHasher.HashPatient();
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1441 break;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1442
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1443 default:
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1444 throw OrthancException(ErrorCode_InternalError);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1445 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1446
434
ccf3a0a43dac EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 418
diff changeset
1447 result["Type"] = EnumerationToString(resourceType);
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1448 result["ID"] = newId;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1449 result["Path"] = GetBasePath(resourceType, newId);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1450 result["PatientID"] = modifiedHasher.HashPatient();
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1451 isFirst = false;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1452 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1453 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1454
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1455 call.GetOutput().AnswerJson(result);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1456 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1457
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1458
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1459
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1460 static void ModifyInstance(RestApi::PostCall& call)
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1461 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1462 Removals removals;
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1463 Replacements replacements;
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1464 bool removePrivateTags;
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1465
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1466 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1467 {
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1468 AnonymizeOrModifyInstance(removals, replacements, removePrivateTags, call);
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1469 }
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1470 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1471
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1472
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1473 static void AnonymizeInstance(RestApi::PostCall& call)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1474 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1475 Removals removals;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1476 Replacements replacements;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1477 bool removePrivateTags;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1478
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1479 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1480 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1481 // Generate random patient ID if not specified
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1482 if (replacements.find(DICOM_TAG_PATIENT_ID) == replacements.end())
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1483 {
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1484 replacements.insert(std::make_pair(DICOM_TAG_PATIENT_ID,
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1485 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Patient)));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1486 }
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1487
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1488 // Generate random study UID if not specified
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1489 if (replacements.find(DICOM_TAG_STUDY_INSTANCE_UID) == replacements.end())
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1490 {
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1491 replacements.insert(std::make_pair(DICOM_TAG_STUDY_INSTANCE_UID,
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1492 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Study)));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1493 }
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1494
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1495 // Generate random series UID if not specified
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1496 if (replacements.find(DICOM_TAG_SERIES_INSTANCE_UID) == replacements.end())
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1497 {
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1498 replacements.insert(std::make_pair(DICOM_TAG_SERIES_INSTANCE_UID,
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1499 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Series)));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1500 }
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1501
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1502 AnonymizeOrModifyInstance(removals, replacements, removePrivateTags, call);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1503 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1504 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1505
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1506
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1507 static void ModifySeriesInplace(RestApi::PostCall& call)
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1508 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1509 Removals removals;
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1510 Replacements replacements;
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1511 bool removePrivateTags;
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1512
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1513 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1514 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1515 AnonymizeOrModifyResource(false, removals, replacements, removePrivateTags,
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1516 MetadataType_ModifiedFrom, ChangeType_ModifiedSeries,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1517 ResourceType_Series, call);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1518 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1519 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 314
diff changeset
1520
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1521
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1522 static void AnonymizeSeriesInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1523 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1524 Removals removals;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1525 Replacements replacements;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1526 bool removePrivateTags;
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1527
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1528 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1529 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1530 AnonymizeOrModifyResource(true, removals, replacements, removePrivateTags,
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1531 MetadataType_AnonymizedFrom, ChangeType_AnonymizedSeries,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1532 ResourceType_Series, call);
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1533 }
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1534 }
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1535
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1536
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1537 static void ModifyStudyInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1538 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1539 Removals removals;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1540 Replacements replacements;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1541 bool removePrivateTags;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1542
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1543 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1544 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1545 AnonymizeOrModifyResource(false, removals, replacements, removePrivateTags,
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1546 MetadataType_ModifiedFrom, ChangeType_ModifiedStudy,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1547 ResourceType_Study, call);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1548 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1549 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1550
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1551
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1552 static void AnonymizeStudyInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1553 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1554 Removals removals;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1555 Replacements replacements;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1556 bool removePrivateTags;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1557
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1558 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1559 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1560 AnonymizeOrModifyResource(true, removals, replacements, removePrivateTags,
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1561 MetadataType_AnonymizedFrom, ChangeType_AnonymizedStudy,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1562 ResourceType_Study, call);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1563 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1564 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1565
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1566
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1567 /*static void ModifyPatientInplace(RestApi::PostCall& call)
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1568 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1569 Removals removals;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1570 Replacements replacements;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1571 bool removePrivateTags;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1572
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1573 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1574 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1575 AnonymizeOrModifyResource(false, removals, replacements, removePrivateTags,
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1576 MetadataType_ModifiedFrom, ChangeType_ModifiedPatient,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1577 ResourceType_Patient, call);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1578 }
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1579 }*/
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1580
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1581
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1582 static void AnonymizePatientInplace(RestApi::PostCall& call)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1583 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1584 Removals removals;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1585 Replacements replacements;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1586 bool removePrivateTags;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1587
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1588 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1589 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1590 AnonymizeOrModifyResource(true, removals, replacements, removePrivateTags,
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1591 MetadataType_AnonymizedFrom, ChangeType_AnonymizedPatient,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1592 ResourceType_Patient, call);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1593 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1594 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1595
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1596
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1597 // Handling of metadata -----------------------------------------------------
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1598
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1599 static void ListMetadata(RestApi::GetCall& call)
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1600 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1601 RETRIEVE_CONTEXT(call);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1602
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1603 std::string publicId = call.GetUriComponent("id", "");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1604 std::list<MetadataType> metadata;
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1605 if (context.GetIndex().ListAvailableMetadata(metadata, publicId))
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1606 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1607 Json::Value result = Json::arrayValue;
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1608
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1609 for (std::list<MetadataType>::const_iterator
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1610 it = metadata.begin(); it != metadata.end(); it++)
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1611 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1612 result.append(EnumerationToString(*it));
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1613 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1614
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1615 call.GetOutput().AnswerJson(result);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1616 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1617 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1618
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1619
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1620 static void GetMetadata(RestApi::GetCall& call)
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1621 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1622 RETRIEVE_CONTEXT(call);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1623
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1624 std::string publicId = call.GetUriComponent("id", "");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1625 std::string name = call.GetUriComponent("name", "");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1626 MetadataType metadata = StringToMetadata(name);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1627
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1628 std::string value;
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1629 if (context.GetIndex().LookupMetadata(value, publicId, metadata))
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1630 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1631 call.GetOutput().AnswerBuffer(value, "text/plain");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1632 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1633 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1634
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
1635
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1636 static void DeleteMetadata(RestApi::DeleteCall& call)
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1637 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1638 RETRIEVE_CONTEXT(call);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1639
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1640 std::string publicId = call.GetUriComponent("id", "");
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1641 std::string name = call.GetUriComponent("name", "");
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1642 MetadataType metadata = StringToMetadata(name);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1643
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1644 if (metadata >= MetadataType_StartUser &&
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1645 metadata <= MetadataType_EndUser)
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1646 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1647 // It is forbidden to modify internal metadata
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1648 context.GetIndex().DeleteMetadata(publicId, metadata);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1649 call.GetOutput().AnswerBuffer("", "text/plain");
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1650 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1651 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1652
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1653
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1654 static void SetMetadata(RestApi::PutCall& call)
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1655 {
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1656 RETRIEVE_CONTEXT(call);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1657
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1658 std::string publicId = call.GetUriComponent("id", "");
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1659 std::string name = call.GetUriComponent("name", "");
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1660 MetadataType metadata = StringToMetadata(name);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1661 std::string value = call.GetPutBody();
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1662
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1663 if (metadata >= MetadataType_StartUser &&
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1664 metadata <= MetadataType_EndUser)
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1665 {
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1666 // It is forbidden to modify internal metadata
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1667 context.GetIndex().SetMetadata(publicId, metadata, value);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1668 call.GetOutput().AnswerBuffer("", "text/plain");
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1669 }
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1670 }
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1671
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1672
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1673 static void GetResourceStatistics(RestApi::GetCall& call)
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1674 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1675 RETRIEVE_CONTEXT(call);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1676 std::string publicId = call.GetUriComponent("id", "");
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1677 Json::Value result;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1678 context.GetIndex().GetStatistics(result, publicId);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1679 call.GetOutput().AnswerJson(result);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1680 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1681
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1682
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1683
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1684 // Orthanc Peers ------------------------------------------------------------
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1685
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1686 static bool IsExistingPeer(const OrthancRestApi::SetOfStrings& peers,
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1687 const std::string& id)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1688 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1689 return peers.find(id) != peers.end();
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1690 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1691
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1692 static void ListPeers(RestApi::GetCall& call)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1693 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1694 RETRIEVE_PEERS(call);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1695
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1696 Json::Value result = Json::arrayValue;
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1697 for (OrthancRestApi::SetOfStrings::const_iterator
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1698 it = peers.begin(); it != peers.end(); it++)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1699 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1700 result.append(*it);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1701 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1702
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1703 call.GetOutput().AnswerJson(result);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1704 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1705
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1706 static void ListPeerOperations(RestApi::GetCall& call)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1707 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1708 RETRIEVE_PEERS(call);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1709
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1710 std::string id = call.GetUriComponent("id", "");
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1711 if (IsExistingPeer(peers, id))
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1712 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1713 Json::Value result = Json::arrayValue;
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1714 result.append("store");
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1715 call.GetOutput().AnswerJson(result);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1716 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1717 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1718
485
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1719 static void PeerStore(RestApi::PostCall& call)
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1720 {
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1721 RETRIEVE_CONTEXT(call);
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1722
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1723 std::string remote = call.GetUriComponent("id", "");
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1724
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1725 std::list<std::string> instances;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1726 if (!GetInstancesToExport(instances, remote, call))
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1727 {
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1728 return;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1729 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1730
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1731 std::string url, username, password;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1732 GetOrthancPeer(remote, url, username, password);
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1733
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1734 // Configure the HTTP client
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1735 HttpClient client;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1736 if (username.size() != 0 && password.size() != 0)
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1737 {
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1738 client.SetCredentials(username.c_str(), password.c_str());
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1739 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1740
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1741 client.SetUrl(url + "instances");
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1742 client.SetMethod(HttpMethod_Post);
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1743
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1744 // Loop over the instances that are to be sent
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1745 for (std::list<std::string>::const_iterator
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1746 it = instances.begin(); it != instances.end(); it++)
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1747 {
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1748 LOG(INFO) << "Sending resource " << *it << " to peer \"" << remote << "\"";
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1749
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1750 context.ReadFile(client.AccessPostData(), *it, FileContentType_Dicom);
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1751
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1752 std::string answer;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1753 if (!client.Apply(answer))
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1754 {
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1755 LOG(ERROR) << "Unable to send resource " << *it << " to peer \"" << remote << "\"";
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1756 return;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1757 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1758 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1759
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1760 call.GetOutput().AnswerBuffer("{}", "application/json");
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1761 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1762
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1763
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1764
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1765
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1766
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1767 // Registration of the various REST handlers --------------------------------
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1768
230
ae2367145b49 renames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 229
diff changeset
1769 OrthancRestApi::OrthancRestApi(ServerContext& context) :
224
4eb0c7ce86c9 refactoring for store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
1770 context_(context)
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1771 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1772 GetListOfDicomModalities(modalities_);
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1773 GetListOfOrthancPeers(peers_);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1774
211
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1775 Register("/", ServeRoot);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1776 Register("/system", GetSystemInformation);
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
1777 Register("/statistics", GetStatistics);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1778 Register("/changes", GetChanges);
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
1779 Register("/changes", DeleteChanges);
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1780 Register("/exports", GetExports);
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
1781 Register("/exports", DeleteExports);
211
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1782
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
1783 Register("/instances", UploadDicomFile);
211
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1784 Register("/instances", ListResources<ResourceType_Instance>);
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1785 Register("/patients", ListResources<ResourceType_Patient>);
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1786 Register("/series", ListResources<ResourceType_Series>);
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1787 Register("/studies", ListResources<ResourceType_Study>);
212
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1788
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1789 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1790 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1791 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1792 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1793 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1794 Register("/series/{id}", GetSingleResource<ResourceType_Series>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1795 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1796 Register("/studies/{id}", GetSingleResource<ResourceType_Study>);
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1797
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1798 Register("/patients/{id}/archive", GetArchive<ResourceType_Patient>);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1799 Register("/studies/{id}/archive", GetArchive<ResourceType_Study>);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1800 Register("/series/{id}/archive", GetArchive<ResourceType_Series>);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1801
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1802 Register("/instances/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1803 Register("/patients/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1804 Register("/studies/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1805 Register("/series/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1806
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1807 Register("/instances/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1808 Register("/instances/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1809 Register("/instances/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1810 Register("/instances/{id}/metadata/{name}", SetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1811 Register("/patients/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1812 Register("/patients/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1813 Register("/patients/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1814 Register("/patients/{id}/metadata/{name}", SetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1815 Register("/series/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1816 Register("/series/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1817 Register("/series/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1818 Register("/series/{id}/metadata/{name}", SetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1819 Register("/studies/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1820 Register("/studies/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1821 Register("/studies/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1822 Register("/studies/{id}/metadata/{name}", SetMetadata);
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1823
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
1824 Register("/patients/{id}/protected", IsProtectedPatient);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
1825 Register("/patients/{id}/protected", SetPatientProtection);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1826 Register("/instances/{id}/file", GetInstanceFile);
483
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
1827 Register("/instances/{id}/export", ExportInstanceFile);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1828 Register("/instances/{id}/tags", GetInstanceTags<false>);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1829 Register("/instances/{id}/simplified-tags", GetInstanceTags<true>);
214
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1830 Register("/instances/{id}/frames", ListFrames);
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
1831 Register("/instances/{id}/content/*", GetRawContent);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1832
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1833 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1834 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1835 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>);
465
7a966b440f19 signed images to PNG
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 463
diff changeset
1836 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>);
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1837 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1838 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1839 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>);
465
7a966b440f19 signed images to PNG
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 463
diff changeset
1840 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>);
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1841
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1842 Register("/modalities", ListModalities);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1843 Register("/modalities/{id}", ListModalityOperations);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1844 Register("/modalities/{id}/find-patient", DicomFindPatient);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1845 Register("/modalities/{id}/find-study", DicomFindStudy);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1846 Register("/modalities/{id}/find-series", DicomFindSeries);
499
7db04aa5104f instance-level find scu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 485
diff changeset
1847 Register("/modalities/{id}/find-instance", DicomFindInstance);
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1848 Register("/modalities/{id}/find", DicomFind);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1849 Register("/modalities/{id}/store", DicomStore);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1850
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1851 Register("/peers", ListPeers);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1852 Register("/peers/{id}", ListPeerOperations);
485
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1853 Register("/peers/{id}/store", PeerStore);
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1854
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1855 Register("/instances/{id}/modify", ModifyInstance);
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1856 Register("/series/{id}/modify", ModifySeriesInplace);
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1857 Register("/studies/{id}/modify", ModifyStudyInplace);
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1858 //Register("/patients/{id}/modify", ModifyPatientInplace);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1859
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1860 Register("/instances/{id}/anonymize", AnonymizeInstance);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1861 Register("/series/{id}/anonymize", AnonymizeSeriesInplace);
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1862 Register("/studies/{id}/anonymize", AnonymizeStudyInplace);
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1863 Register("/patients/{id}/anonymize", AnonymizePatientInplace);
342
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
1864
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
1865 Register("/tools/generate-uid", GenerateUid);
418
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
1866 Register("/tools/execute-script", ExecuteScript);
446
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
1867 Register("/tools/now", GetNowIsoString);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1868 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1869 }