annotate OrthancServer/OrthancRestApi.cpp @ 484:b8ace6fc1d1f

preparation for handling Orthanc peers
author Sebastien Jodogne <s.jodogne@gmail.com>
date Tue, 16 Jul 2013 12:51:27 +0200
parents 8c3573d28868
children bdbde1fbfab3
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2013 Medical Physics Department, CHU of Liege,
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4 * Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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32
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33 #include "OrthancRestApi.h"
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34
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35 #include "../Core/HttpServer/FilesystemHttpSender.h"
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36 #include "../Core/Uuid.h"
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37 #include "../Core/Compression/HierarchicalZipWriter.h"
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38 #include "DicomProtocol/DicomUserConnection.h"
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39 #include "FromDcmtkBridge.h"
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40 #include "OrthancInitialization.h"
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41 #include "ServerToolbox.h"
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42
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43 #include <dcmtk/dcmdata/dcistrmb.h>
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44 #include <dcmtk/dcmdata/dcfilefo.h>
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45 #include <boost/lexical_cast.hpp>
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46 #include <glog/logging.h>
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48
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49 #define RETRIEVE_CONTEXT(call) \
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50 OrthancRestApi& contextApi = \
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51 dynamic_cast<OrthancRestApi&>(call.GetContext()); \
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52 ServerContext& context = contextApi.GetContext()
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53
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54 #define RETRIEVE_MODALITIES(call) \
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55 const OrthancRestApi::SetOfStrings& modalities = \
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56 dynamic_cast<OrthancRestApi&>(call.GetContext()).GetModalities();
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57
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58 #define RETRIEVE_PEERS(call) \
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59 const OrthancRestApi::SetOfStrings& peers = \
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60 dynamic_cast<OrthancRestApi&>(call.GetContext()).GetPeers();
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64 namespace Orthanc
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65 {
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66 // TODO IMPROVE MULTITHREADING
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67 // Every call to "ParsedDicomFile" must lock this mutex!!!
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68 static boost::mutex cacheMutex_;
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69
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70
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71 // DICOM SCU ----------------------------------------------------------------
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72
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73 static void ConnectToModality(DicomUserConnection& connection,
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74 const std::string& name)
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75 {
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76 std::string aet, address;
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77 int port;
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78 GetDicomModality(name, aet, address, port);
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79 connection.SetLocalApplicationEntityTitle(GetGlobalStringParameter("DicomAet", "ORTHANC"));
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80 connection.SetDistantApplicationEntityTitle(aet);
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81 connection.SetDistantHost(address);
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82 connection.SetDistantPort(port);
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83 connection.Open();
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84 }
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85
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86 static bool MergeQueryAndTemplate(DicomMap& result,
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87 const std::string& postData)
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88 {
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89 Json::Value query;
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90 Json::Reader reader;
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91
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92 if (!reader.parse(postData, query) ||
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93 query.type() != Json::objectValue)
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94 {
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95 return false;
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96 }
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97
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98 Json::Value::Members members = query.getMemberNames();
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99 for (size_t i = 0; i < members.size(); i++)
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100 {
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101 DicomTag t = FromDcmtkBridge::ParseTag(members[i]);
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102 result.SetValue(t, query[members[i]].asString());
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103 }
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104
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105 return true;
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106 }
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107
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108 static void DicomFindPatient(RestApi::PostCall& call)
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109 {
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110 DicomMap m;
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111 DicomMap::SetupFindPatientTemplate(m);
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112 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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113 {
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114 return;
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115 }
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116
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117 DicomUserConnection connection;
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118 ConnectToModality(connection, call.GetUriComponent("id", ""));
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119
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120 DicomFindAnswers answers;
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121 connection.FindPatient(answers, m);
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122
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123 Json::Value result;
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124 answers.ToJson(result);
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125 call.GetOutput().AnswerJson(result);
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126 }
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127
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128 static void DicomFindStudy(RestApi::PostCall& call)
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129 {
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130 DicomMap m;
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131 DicomMap::SetupFindStudyTemplate(m);
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132 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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133 {
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134 return;
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135 }
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136
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137 if (m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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138 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2)
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139 {
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140 return;
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141 }
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142
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143 DicomUserConnection connection;
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144 ConnectToModality(connection, call.GetUriComponent("id", ""));
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145
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146 DicomFindAnswers answers;
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147 connection.FindStudy(answers, m);
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148
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149 Json::Value result;
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150 answers.ToJson(result);
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151 call.GetOutput().AnswerJson(result);
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152 }
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153
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154 static void DicomFindSeries(RestApi::PostCall& call)
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155 {
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156 DicomMap m;
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157 DicomMap::SetupFindSeriesTemplate(m);
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158 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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159 {
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160 return;
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161 }
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162
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163 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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164 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) ||
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165 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2)
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166 {
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167 return;
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168 }
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169
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170 DicomUserConnection connection;
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171 ConnectToModality(connection, call.GetUriComponent("id", ""));
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172
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173 DicomFindAnswers answers;
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174 connection.FindSeries(answers, m);
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175
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176 Json::Value result;
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177 answers.ToJson(result);
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178 call.GetOutput().AnswerJson(result);
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179 }
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180
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181 static void DicomFind(RestApi::PostCall& call)
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182 {
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183 DicomMap m;
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184 DicomMap::SetupFindPatientTemplate(m);
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185 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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186 {
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187 return;
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188 }
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189
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190 DicomUserConnection connection;
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191 ConnectToModality(connection, call.GetUriComponent("id", ""));
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diff changeset
192
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193 DicomFindAnswers patients;
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194 connection.FindPatient(patients, m);
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195
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196 // Loop over the found patients
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197 Json::Value result = Json::arrayValue;
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198 for (size_t i = 0; i < patients.GetSize(); i++)
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199 {
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200 Json::Value patient(Json::objectValue);
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201 FromDcmtkBridge::ToJson(patient, patients.GetAnswer(i));
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202
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203 DicomMap::SetupFindStudyTemplate(m);
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204 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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diff changeset
205 {
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206 return;
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207 }
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208 m.CopyTagIfExists(patients.GetAnswer(i), DICOM_TAG_PATIENT_ID);
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diff changeset
209
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diff changeset
210 DicomFindAnswers studies;
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211 connection.FindStudy(studies, m);
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diff changeset
212
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213 patient["Studies"] = Json::arrayValue;
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214
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diff changeset
215 // Loop over the found studies
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216 for (size_t j = 0; j < studies.GetSize(); j++)
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diff changeset
217 {
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218 Json::Value study(Json::objectValue);
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diff changeset
219 FromDcmtkBridge::ToJson(study, studies.GetAnswer(j));
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diff changeset
220
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221 DicomMap::SetupFindSeriesTemplate(m);
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diff changeset
222 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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diff changeset
223 {
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diff changeset
224 return;
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225 }
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226 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_PATIENT_ID);
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diff changeset
227 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_STUDY_INSTANCE_UID);
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diff changeset
228
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diff changeset
229 DicomFindAnswers series;
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diff changeset
230 connection.FindSeries(series, m);
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diff changeset
231
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diff changeset
232 // Loop over the found series
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diff changeset
233 study["Series"] = Json::arrayValue;
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diff changeset
234 for (size_t k = 0; k < series.GetSize(); k++)
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diff changeset
235 {
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diff changeset
236 Json::Value series2(Json::objectValue);
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diff changeset
237 FromDcmtkBridge::ToJson(series2, series.GetAnswer(k));
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diff changeset
238 study["Series"].append(series2);
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diff changeset
239 }
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diff changeset
240
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diff changeset
241 patient["Studies"].append(study);
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diff changeset
242 }
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diff changeset
243
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diff changeset
244 result.append(patient);
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diff changeset
245 }
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diff changeset
246
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diff changeset
247 call.GetOutput().AnswerJson(result);
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diff changeset
248 }
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diff changeset
249
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diff changeset
250
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diff changeset
251 static void DicomStore(RestApi::PostCall& call)
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diff changeset
252 {
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253 RETRIEVE_CONTEXT(call);
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diff changeset
254
231
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diff changeset
255 std::string remote = call.GetUriComponent("id", "");
402
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diff changeset
256 std::string stripped = Toolbox::StripSpaces(call.GetPostBody());
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diff changeset
257
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diff changeset
258 Json::Value request;
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diff changeset
259 if (Toolbox::IsSHA1(stripped))
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260 {
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diff changeset
261 // This is for compatibility with Orthanc <= 0.5.1.
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262 request = stripped;
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263 }
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diff changeset
264 else if (!call.ParseJsonRequest(request))
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diff changeset
265 {
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diff changeset
266 // Bad JSON request
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267 return;
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diff changeset
268 }
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diff changeset
269
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diff changeset
270 std::list<std::string> instances;
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271 if (request.isString())
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diff changeset
272 {
403
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273 LOG(INFO) << "Sending resource " << request.asString() << " to modality " << remote;
402
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diff changeset
274 context.GetIndex().LogExportedResource(request.asString(), remote);
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diff changeset
275 context.GetIndex().GetChildInstances(instances, request.asString());
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276 }
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diff changeset
277 else if (request.isArray())
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diff changeset
278 {
d2c69150a979 bulk storescu
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diff changeset
279 for (Json::Value::ArrayIndex i = 0; i < request.size(); i++)
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diff changeset
280 {
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diff changeset
281 if (!request[i].isString())
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diff changeset
282 {
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diff changeset
283 return;
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diff changeset
284 }
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diff changeset
285
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diff changeset
286 std::string stripped = Toolbox::StripSpaces(request[i].asString());
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287 if (!Toolbox::IsSHA1(stripped))
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diff changeset
288 {
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diff changeset
289 return;
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diff changeset
290 }
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diff changeset
291
403
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diff changeset
292 LOG(INFO) << "Sending resource " << stripped << " to modality " << remote;
402
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diff changeset
293 context.GetIndex().LogExportedResource(stripped, remote);
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diff changeset
294
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295 std::list<std::string> tmp;
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296 context.GetIndex().GetChildInstances(tmp, stripped);
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diff changeset
297 instances.merge(tmp);
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diff changeset
298 assert(tmp.size() == 0);
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299 }
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diff changeset
300 }
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diff changeset
301 else
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diff changeset
302 {
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diff changeset
303 // Neither a string, nor a list of strings. Bad request.
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diff changeset
304 return;
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305 }
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diff changeset
306
227
209ca3f6db62 dicom-scu from rest
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diff changeset
307 DicomUserConnection connection;
231
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diff changeset
308 ConnectToModality(connection, remote);
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parents: 230
diff changeset
309
402
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diff changeset
310 for (std::list<std::string>::const_iterator
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diff changeset
311 it = instances.begin(); it != instances.end(); it++)
227
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diff changeset
312 {
402
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diff changeset
313 std::string dicom;
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diff changeset
314 context.ReadFile(dicom, *it, FileContentType_Dicom);
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diff changeset
315 connection.Store(dicom);
227
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diff changeset
316 }
231
8098448bd827 export log
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diff changeset
317
402
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diff changeset
318 call.GetOutput().AnswerBuffer("{}", "application/json");
227
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parents: 226
diff changeset
319 }
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
320
209ca3f6db62 dicom-scu from rest
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parents: 226
diff changeset
321
209ca3f6db62 dicom-scu from rest
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diff changeset
322
210
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323 // System information -------------------------------------------------------
211
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diff changeset
324
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diff changeset
325 static void ServeRoot(RestApi::GetCall& call)
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diff changeset
326 {
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diff changeset
327 call.GetOutput().Redirect("app/explorer.html");
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parents: 210
diff changeset
328 }
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
329
96b7918a6a18 start of the refactoring of the Orthanc REST API
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diff changeset
330 static void GetSystemInformation(RestApi::GetCall& call)
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
331 {
238
e4148b0ab1d0 statistics URI
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diff changeset
332 Json::Value result = Json::objectValue;
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
333
96b7918a6a18 start of the refactoring of the Orthanc REST API
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diff changeset
334 result["Version"] = ORTHANC_VERSION;
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
335 result["Name"] = GetGlobalStringParameter("Name", "");
238
e4148b0ab1d0 statistics URI
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diff changeset
336
e4148b0ab1d0 statistics URI
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parents: 237
diff changeset
337 call.GetOutput().AnswerJson(result);
e4148b0ab1d0 statistics URI
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parents: 237
diff changeset
338 }
227
209ca3f6db62 dicom-scu from rest
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diff changeset
339
238
e4148b0ab1d0 statistics URI
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diff changeset
340 static void GetStatistics(RestApi::GetCall& call)
e4148b0ab1d0 statistics URI
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diff changeset
341 {
e4148b0ab1d0 statistics URI
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diff changeset
342 RETRIEVE_CONTEXT(call);
e4148b0ab1d0 statistics URI
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parents: 237
diff changeset
343 Json::Value result = Json::objectValue;
e4148b0ab1d0 statistics URI
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diff changeset
344 context.GetIndex().ComputeStatistics(result);
210
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345 call.GetOutput().AnswerJson(result);
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parents:
diff changeset
346 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
347
342
a58a8be26aff generation of random uid in the rest api
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diff changeset
348 static void GenerateUid(RestApi::GetCall& call)
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diff changeset
349 {
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diff changeset
350 std::string level = call.GetArgument("level", "");
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diff changeset
351 if (level == "patient")
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
352 {
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parents: 321
diff changeset
353 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Patient), "text/plain");
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
354 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
355 else if (level == "study")
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
356 {
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
357 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Study), "text/plain");
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
358 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
359 else if (level == "series")
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
360 {
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
361 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Series), "text/plain");
a58a8be26aff generation of random uid in the rest api
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parents: 321
diff changeset
362 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
363 else if (level == "instance")
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
364 {
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
365 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Instance), "text/plain");
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
366 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
367 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
368
418
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
369 static void ExecuteScript(RestApi::PostCall& call)
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
370 {
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
371 std::string result;
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
372 RETRIEVE_CONTEXT(call);
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
373 context.GetLuaContext().Execute(result, call.GetPostBody());
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
374 call.GetOutput().AnswerBuffer(result, "text/plain");
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
375 }
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
376
446
b7ef1a7d857e /tools/now
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parents: 443
diff changeset
377 static void GetNowIsoString(RestApi::GetCall& call)
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
378 {
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
379 call.GetOutput().AnswerBuffer(Toolbox::GetNowIsoString(), "text/plain");
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
380 }
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
381
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
382
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
383
418
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
384
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
385
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
386
211
b7aea293b965 list of resources
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parents: 210
diff changeset
387 // List all the patients, studies, series or instances ----------------------
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parents: 210
diff changeset
388
b7aea293b965 list of resources
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parents: 210
diff changeset
389 template <enum ResourceType resourceType>
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parents: 210
diff changeset
390 static void ListResources(RestApi::GetCall& call)
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parents: 210
diff changeset
391 {
b7aea293b965 list of resources
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parents: 210
diff changeset
392 RETRIEVE_CONTEXT(call);
b7aea293b965 list of resources
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parents: 210
diff changeset
393
b7aea293b965 list of resources
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parents: 210
diff changeset
394 Json::Value result;
b7aea293b965 list of resources
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parents: 210
diff changeset
395 context.GetIndex().GetAllUuids(result, resourceType);
b7aea293b965 list of resources
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parents: 210
diff changeset
396 call.GetOutput().AnswerJson(result);
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
397 }
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
398
212
f276b175dcaf delete resources
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parents: 211
diff changeset
399 template <enum ResourceType resourceType>
f276b175dcaf delete resources
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parents: 211
diff changeset
400 static void GetSingleResource(RestApi::GetCall& call)
f276b175dcaf delete resources
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parents: 211
diff changeset
401 {
f276b175dcaf delete resources
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parents: 211
diff changeset
402 RETRIEVE_CONTEXT(call);
f276b175dcaf delete resources
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parents: 211
diff changeset
403
f276b175dcaf delete resources
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parents: 211
diff changeset
404 Json::Value result;
f276b175dcaf delete resources
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parents: 211
diff changeset
405 if (context.GetIndex().LookupResource(result, call.GetUriComponent("id", ""), resourceType))
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
406 {
f276b175dcaf delete resources
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parents: 211
diff changeset
407 call.GetOutput().AnswerJson(result);
f276b175dcaf delete resources
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parents: 211
diff changeset
408 }
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
409 }
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
410
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
411 template <enum ResourceType resourceType>
f276b175dcaf delete resources
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parents: 211
diff changeset
412 static void DeleteSingleResource(RestApi::DeleteCall& call)
f276b175dcaf delete resources
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parents: 211
diff changeset
413 {
f276b175dcaf delete resources
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parents: 211
diff changeset
414 RETRIEVE_CONTEXT(call);
f276b175dcaf delete resources
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parents: 211
diff changeset
415
f276b175dcaf delete resources
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parents: 211
diff changeset
416 Json::Value result;
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
417 if (context.GetIndex().DeleteResource(result, call.GetUriComponent("id", ""), resourceType))
f276b175dcaf delete resources
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parents: 211
diff changeset
418 {
f276b175dcaf delete resources
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parents: 211
diff changeset
419 call.GetOutput().AnswerJson(result);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
420 }
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
421 }
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
422
211
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
423
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
424 // Download of ZIP files ----------------------------------------------------
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
425
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
426
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
427 static std::string GetDirectoryNameInArchive(const Json::Value& resource,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
428 ResourceType resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
429 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
430 switch (resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
431 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
432 case ResourceType_Patient:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
433 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
434 std::string p = resource["MainDicomTags"]["PatientID"].asString();
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
435 std::string n = resource["MainDicomTags"]["PatientName"].asString();
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
436 return p + " " + n;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
437 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
438
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
439 case ResourceType_Study:
253
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
440 {
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
441 return resource["MainDicomTags"]["StudyDescription"].asString();
253
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
442 }
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
443
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
444 case ResourceType_Series:
253
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
445 {
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
446 std::string d = resource["MainDicomTags"]["SeriesDescription"].asString();
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
447 std::string m = resource["MainDicomTags"]["Modality"].asString();
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
448 return m + " " + d;
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
449 }
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
450
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
451 default:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
452 throw OrthancException(ErrorCode_InternalError);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
453 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
454 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
455
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
456 static bool CreateRootDirectoryInArchive(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
457 ServerContext& context,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
458 const Json::Value& resource,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
459 ResourceType resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
460 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
461 if (resourceType == ResourceType_Patient)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
462 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
463 return true;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
464 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
465
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
466 ResourceType parentType = GetParentResourceType(resourceType);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
467 Json::Value parent;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
468
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
469 switch (resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
470 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
471 case ResourceType_Study:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
472 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
473 if (!context.GetIndex().LookupResource(parent, resource["ParentPatient"].asString(), parentType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
474 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
475 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
476 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
477
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
478 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
479 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
480
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
481 case ResourceType_Series:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
482 if (!context.GetIndex().LookupResource(parent, resource["ParentStudy"].asString(), parentType) ||
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
483 !CreateRootDirectoryInArchive(writer, context, parent, parentType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
484 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
485 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
486 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
487 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
488
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
489 default:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
490 throw OrthancException(ErrorCode_NotImplemented);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
491 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
492
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
493 writer.OpenDirectory(GetDirectoryNameInArchive(parent, parentType).c_str());
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
494 return true;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
495 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
496
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
497 static bool ArchiveInstance(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
498 ServerContext& context,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
499 const std::string& instancePublicId)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
500 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
501 Json::Value instance;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
502 if (!context.GetIndex().LookupResource(instance, instancePublicId, ResourceType_Instance))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
503 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
504 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
505 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
506
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
507 std::string filename = instance["MainDicomTags"]["SOPInstanceUID"].asString() + ".dcm";
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
508 writer.OpenFile(filename.c_str());
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
509
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
510 std::string dicom;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
511 context.ReadFile(dicom, instancePublicId, FileContentType_Dicom);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
512 writer.Write(dicom);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
513
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
514 return true;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
515 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
516
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
517 static bool ArchiveInternal(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
518 ServerContext& context,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
519 const std::string& publicId,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
520 ResourceType resourceType,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
521 bool isFirstLevel)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
522 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
523 Json::Value resource;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
524 if (!context.GetIndex().LookupResource(resource, publicId, resourceType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
525 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
526 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
527 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
528
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
529 if (isFirstLevel &&
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
530 !CreateRootDirectoryInArchive(writer, context, resource, resourceType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
531 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
532 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
533 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
534
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
535 writer.OpenDirectory(GetDirectoryNameInArchive(resource, resourceType).c_str());
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
536
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
537 switch (resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
538 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
539 case ResourceType_Patient:
299
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
540 for (Json::Value::ArrayIndex i = 0; i < resource["Studies"].size(); i++)
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
541 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
542 std::string studyId = resource["Studies"][i].asString();
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
543 if (!ArchiveInternal(writer, context, studyId, ResourceType_Study, false))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
544 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
545 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
546 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
547 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
548 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
549
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
550 case ResourceType_Study:
299
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
551 for (Json::Value::ArrayIndex i = 0; i < resource["Series"].size(); i++)
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
552 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
553 std::string seriesId = resource["Series"][i].asString();
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
554 if (!ArchiveInternal(writer, context, seriesId, ResourceType_Series, false))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
555 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
556 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
557 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
558 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
559 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
560
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
561 case ResourceType_Series:
299
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
562 for (Json::Value::ArrayIndex i = 0; i < resource["Instances"].size(); i++)
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
563 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
564 if (!ArchiveInstance(writer, context, resource["Instances"][i].asString()))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
565 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
566 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
567 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
568 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
569 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
570
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
571 default:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
572 throw OrthancException(ErrorCode_InternalError);
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573 }
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parents: 249
diff changeset
574
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diff changeset
575 writer.CloseDirectory();
f23318b11b39 creation of zip files
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diff changeset
576 return true;
f23318b11b39 creation of zip files
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diff changeset
577 }
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
578
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diff changeset
579 template <enum ResourceType resourceType>
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diff changeset
580 static void GetArchive(RestApi::GetCall& call)
248
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diff changeset
581 {
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diff changeset
582 RETRIEVE_CONTEXT(call);
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diff changeset
583
250
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diff changeset
584 // Create a RAII for the temporary file to manage the ZIP file
248
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diff changeset
585 Toolbox::TemporaryFile tmp;
250
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diff changeset
586 std::string id = call.GetUriComponent("id", "");
248
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diff changeset
587
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diff changeset
588 {
250
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diff changeset
589 // Create a ZIP writer
248
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diff changeset
590 HierarchicalZipWriter writer(tmp.GetPath().c_str());
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diff changeset
591
250
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diff changeset
592 // Store the requested resource into the ZIP
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diff changeset
593 if (!ArchiveInternal(writer, context, id, resourceType, true))
f23318b11b39 creation of zip files
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diff changeset
594 {
f23318b11b39 creation of zip files
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diff changeset
595 return;
248
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596 }
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diff changeset
597 }
250
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diff changeset
598
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diff changeset
599 // Prepare the sending of the ZIP file
248
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diff changeset
600 FilesystemHttpSender sender(tmp.GetPath().c_str());
250
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diff changeset
601 sender.SetContentType("application/zip");
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
602 sender.SetDownloadFilename(id + ".zip");
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
603
f23318b11b39 creation of zip files
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diff changeset
604 // Send the ZIP
248
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diff changeset
605 call.GetOutput().AnswerFile(sender);
250
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diff changeset
606
f23318b11b39 creation of zip files
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diff changeset
607 // The temporary file is automatically removed thanks to the RAII
248
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diff changeset
608 }
2442033911d6 creation of zip files
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parents: 238
diff changeset
609
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
610
210
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
611 // Changes API --------------------------------------------------------------
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parents:
diff changeset
612
231
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diff changeset
613 static void GetSinceAndLimit(int64_t& since,
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diff changeset
614 unsigned int& limit,
237
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diff changeset
615 bool& last,
231
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diff changeset
616 const RestApi::GetCall& call)
210
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parents:
diff changeset
617 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
618 static const unsigned int MAX_RESULTS = 100;
237
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diff changeset
619
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diff changeset
620 if (call.HasArgument("last"))
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diff changeset
621 {
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diff changeset
622 last = true;
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diff changeset
623 return;
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diff changeset
624 }
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diff changeset
625
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diff changeset
626 last = false;
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diff changeset
627
210
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parents:
diff changeset
628 try
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
629 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
630 since = boost::lexical_cast<int64_t>(call.GetArgument("since", "0"));
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
631 limit = boost::lexical_cast<unsigned int>(call.GetArgument("limit", "0"));
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
632 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
633 catch (boost::bad_lexical_cast)
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
634 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
635 return;
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
636 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
637
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
638 if (limit == 0 || limit > MAX_RESULTS)
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
639 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
640 limit = MAX_RESULTS;
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
641 }
231
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diff changeset
642 }
8098448bd827 export log
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parents: 230
diff changeset
643
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diff changeset
644 static void GetChanges(RestApi::GetCall& call)
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diff changeset
645 {
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diff changeset
646 RETRIEVE_CONTEXT(call);
8098448bd827 export log
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parents: 230
diff changeset
647
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diff changeset
648 //std::string filter = GetArgument(getArguments, "filter", "");
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diff changeset
649 int64_t since;
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diff changeset
650 unsigned int limit;
237
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diff changeset
651 bool last;
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diff changeset
652 GetSinceAndLimit(since, limit, last, call);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
653
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
654 Json::Value result;
237
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diff changeset
655 if ((!last && context.GetIndex().GetChanges(result, since, limit)) ||
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diff changeset
656 ( last && context.GetIndex().GetLastChange(result)))
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
657 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
658 call.GetOutput().AnswerJson(result);
96b7918a6a18 start of the refactoring of the Orthanc REST API
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parents:
diff changeset
659 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
660 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
661
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
662
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
663 static void DeleteChanges(RestApi::DeleteCall& call)
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
664 {
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
665 RETRIEVE_CONTEXT(call);
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
666 context.GetIndex().DeleteChanges();
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
667 call.GetOutput().AnswerBuffer("", "text/plain");
47d63c941902 clearing /exports and /changes
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parents: 403
diff changeset
668 }
47d63c941902 clearing /exports and /changes
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parents: 403
diff changeset
669
47d63c941902 clearing /exports and /changes
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diff changeset
670
231
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diff changeset
671 static void GetExports(RestApi::GetCall& call)
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diff changeset
672 {
8098448bd827 export log
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diff changeset
673 RETRIEVE_CONTEXT(call);
8098448bd827 export log
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diff changeset
674
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diff changeset
675 int64_t since;
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diff changeset
676 unsigned int limit;
237
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diff changeset
677 bool last;
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diff changeset
678 GetSinceAndLimit(since, limit, last, call);
231
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diff changeset
679
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diff changeset
680 Json::Value result;
237
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diff changeset
681 if ((!last && context.GetIndex().GetExportedResources(result, since, limit)) ||
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parents: 233
diff changeset
682 ( last && context.GetIndex().GetLastExportedResource(result)))
231
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diff changeset
683 {
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diff changeset
684 call.GetOutput().AnswerJson(result);
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diff changeset
685 }
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diff changeset
686 }
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diff changeset
687
413
47d63c941902 clearing /exports and /changes
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parents: 403
diff changeset
688
47d63c941902 clearing /exports and /changes
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parents: 403
diff changeset
689 static void DeleteExports(RestApi::DeleteCall& call)
47d63c941902 clearing /exports and /changes
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parents: 403
diff changeset
690 {
47d63c941902 clearing /exports and /changes
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parents: 403
diff changeset
691 RETRIEVE_CONTEXT(call);
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
692 context.GetIndex().DeleteExportedResources();
47d63c941902 clearing /exports and /changes
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parents: 403
diff changeset
693 call.GetOutput().AnswerBuffer("", "text/plain");
47d63c941902 clearing /exports and /changes
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parents: 403
diff changeset
694 }
47d63c941902 clearing /exports and /changes
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parents: 403
diff changeset
695
210
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parents:
diff changeset
696
272
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diff changeset
697 // Get information about a single patient -----------------------------------
337c506461d2 protection from rest api
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diff changeset
698
337c506461d2 protection from rest api
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diff changeset
699 static void IsProtectedPatient(RestApi::GetCall& call)
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diff changeset
700 {
337c506461d2 protection from rest api
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diff changeset
701 RETRIEVE_CONTEXT(call);
337c506461d2 protection from rest api
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diff changeset
702 std::string publicId = call.GetUriComponent("id", "");
337c506461d2 protection from rest api
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diff changeset
703 bool isProtected = context.GetIndex().IsProtectedPatient(publicId);
337c506461d2 protection from rest api
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parents: 253
diff changeset
704 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", "text/plain");
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diff changeset
705 }
337c506461d2 protection from rest api
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parents: 253
diff changeset
706
337c506461d2 protection from rest api
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diff changeset
707
337c506461d2 protection from rest api
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diff changeset
708 static void SetPatientProtection(RestApi::PutCall& call)
337c506461d2 protection from rest api
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diff changeset
709 {
337c506461d2 protection from rest api
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diff changeset
710 RETRIEVE_CONTEXT(call);
337c506461d2 protection from rest api
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diff changeset
711 std::string publicId = call.GetUriComponent("id", "");
337c506461d2 protection from rest api
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parents: 253
diff changeset
712 std::string s = Toolbox::StripSpaces(call.GetPutBody());
337c506461d2 protection from rest api
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diff changeset
713
337c506461d2 protection from rest api
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parents: 253
diff changeset
714 if (s == "0")
337c506461d2 protection from rest api
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parents: 253
diff changeset
715 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
716 context.GetIndex().SetProtectedPatient(publicId, false);
337c506461d2 protection from rest api
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parents: 253
diff changeset
717 call.GetOutput().AnswerBuffer("", "text/plain");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
718 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
719 else if (s == "1")
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
720 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
721 context.GetIndex().SetProtectedPatient(publicId, true);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
722 call.GetOutput().AnswerBuffer("", "text/plain");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
723 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
724 else
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
725 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
726 // Bad request
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
727 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
728 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
729
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
730
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
731 // Get information about a single instance ----------------------------------
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
732
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
733 static void GetInstanceFile(RestApi::GetCall& call)
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
734 {
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
735 RETRIEVE_CONTEXT(call);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
736
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
737 std::string publicId = call.GetUriComponent("id", "");
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
738 context.AnswerFile(call.GetOutput(), publicId, FileContentType_Dicom);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
739 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
740
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
741
483
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
742 static void ExportInstanceFile(RestApi::PostCall& call)
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
743 {
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
744 RETRIEVE_CONTEXT(call);
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
745
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
746 std::string publicId = call.GetUriComponent("id", "");
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
747
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
748 std::string dicom;
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
749 context.ReadFile(dicom, publicId, FileContentType_Dicom);
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
750
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
751 Toolbox::WriteFile(dicom, call.GetPostBody());
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
752
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
753 call.GetOutput().AnswerBuffer("{}", "application/json");
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
754 }
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
755
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
756
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
757 template <bool simplify>
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
758 static void GetInstanceTags(RestApi::GetCall& call)
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
759 {
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
760 RETRIEVE_CONTEXT(call);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
761
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
762 std::string publicId = call.GetUriComponent("id", "");
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
763
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
764 Json::Value full;
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
765 context.ReadJson(full, publicId);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
766
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
767 if (simplify)
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
768 {
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
769 Json::Value simplified;
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
770 SimplifyTags(simplified, full);
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
771 call.GetOutput().AnswerJson(simplified);
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
772 }
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
773 else
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
774 {
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
775 call.GetOutput().AnswerJson(full);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
776 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
777 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
778
214
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
779
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
780 static void ListFrames(RestApi::GetCall& call)
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
781 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
782 RETRIEVE_CONTEXT(call);
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
783
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
784 Json::Value instance;
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
785 if (context.GetIndex().LookupResource(instance, call.GetUriComponent("id", ""), ResourceType_Instance))
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
786 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
787 unsigned int numberOfFrames = 1;
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
788
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
789 try
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
790 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
791 Json::Value tmp = instance["MainDicomTags"]["NumberOfFrames"];
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
792 numberOfFrames = boost::lexical_cast<unsigned int>(tmp.asString());
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
793 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
794 catch (...)
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
795 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
796 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
797
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
798 Json::Value result = Json::arrayValue;
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
799 for (unsigned int i = 0; i < numberOfFrames; i++)
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
800 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
801 result.append(i);
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
802 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
803
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
804 call.GetOutput().AnswerJson(result);
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
805 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
806 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
807
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
808
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
809 template <enum ImageExtractionMode mode>
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
810 static void GetImage(RestApi::GetCall& call)
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
811 {
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
812 RETRIEVE_CONTEXT(call);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
813
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
814 std::string frameId = call.GetUriComponent("frame", "0");
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
815
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
816 unsigned int frame;
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
817 try
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
818 {
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
819 frame = boost::lexical_cast<unsigned int>(frameId);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
820 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
821 catch (boost::bad_lexical_cast)
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
822 {
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
823 return;
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
824 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
825
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
826 std::string publicId = call.GetUriComponent("id", "");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
827 std::string dicomContent, png;
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
828 context.ReadFile(dicomContent, publicId, FileContentType_Dicom);
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
829
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
830 try
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
831 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
832 FromDcmtkBridge::ExtractPngImage(png, dicomContent, frame, mode);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
833 call.GetOutput().AnswerBuffer(png, "image/png");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
834 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
835 catch (OrthancException& e)
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
836 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
837 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange)
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
838 {
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
839 // The frame number is out of the range for this DICOM
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
840 // instance, the resource is not existent
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
841 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
842 else
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
843 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
844 std::string root = "";
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
845 for (size_t i = 1; i < call.GetFullUri().size(); i++)
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
846 {
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
847 root += "../";
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
848 }
218
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
849
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
850 call.GetOutput().Redirect(root + "app/images/unsupported.png");
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
851 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
852 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
853 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
854
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
855
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
856 // Upload of DICOM files through HTTP ---------------------------------------
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
857
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
858 static void UploadDicomFile(RestApi::PostCall& call)
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
859 {
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
860 RETRIEVE_CONTEXT(call);
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
861
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
862 const std::string& postData = call.GetPostBody();
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
863 if (postData.size() == 0)
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
864 {
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
865 return;
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
866 }
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
867
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
868 LOG(INFO) << "Receiving a DICOM file of " << postData.size() << " bytes through HTTP";
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
869
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
870 std::string publicId;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
871 StoreStatus status = context.Store(publicId, postData);
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
872 Json::Value result = Json::objectValue;
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
873
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
874 if (status != StoreStatus_Failure)
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
875 {
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
876 result["ID"] = publicId;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
877 result["Path"] = GetBasePath(ResourceType_Instance, publicId);
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
878 }
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
879
434
ccf3a0a43dac EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 418
diff changeset
880 result["Status"] = EnumerationToString(status);
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
881 call.GetOutput().AnswerJson(result);
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
882 }
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
883
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
884
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
885
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
886 // DICOM bridge -------------------------------------------------------------
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
887
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
888 static bool IsExistingModality(const OrthancRestApi::SetOfStrings& modalities,
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
889 const std::string& id)
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
890 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
891 return modalities.find(id) != modalities.end();
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
892 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
893
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
894 static void ListModalities(RestApi::GetCall& call)
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
895 {
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
896 RETRIEVE_MODALITIES(call);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
897
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
898 Json::Value result = Json::arrayValue;
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
899 for (OrthancRestApi::SetOfStrings::const_iterator
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
900 it = modalities.begin(); it != modalities.end(); it++)
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
901 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
902 result.append(*it);
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
903 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
904
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
905 call.GetOutput().AnswerJson(result);
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
906 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
907
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
908
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
909 static void ListModalityOperations(RestApi::GetCall& call)
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
910 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
911 RETRIEVE_MODALITIES(call);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
912
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
913 std::string id = call.GetUriComponent("id", "");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
914 if (IsExistingModality(modalities, id))
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
915 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
916 Json::Value result = Json::arrayValue;
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
917 result.append("find-patient");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
918 result.append("find-study");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
919 result.append("find-series");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
920 result.append("find");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
921 result.append("store");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
922 call.GetOutput().AnswerJson(result);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
923 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
924 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
925
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
926
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
927
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
928 // Raw access to the DICOM tags of an instance ------------------------------
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
929
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
930 static void GetRawContent(RestApi::GetCall& call)
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
931 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 314
diff changeset
932 boost::mutex::scoped_lock lock(cacheMutex_);
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
933
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
934 RETRIEVE_CONTEXT(call);
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
935 std::string id = call.GetUriComponent("id", "");
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
936 ParsedDicomFile& dicom = context.GetDicomFile(id);
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
937 dicom.SendPathValue(call.GetOutput(), call.GetTrailingUri());
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
938 }
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
939
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
940
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
941
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
942 // Modification of DICOM instances ------------------------------------------
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
943
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
944 namespace
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
945 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
946 typedef std::set<DicomTag> Removals;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
947 typedef std::map<DicomTag, std::string> Replacements;
350
8031f9cfe7fe removal of old code
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 349
diff changeset
948 typedef std::map< std::pair<DicomRootLevel, std::string>, std::string> UidMap;
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
949 }
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
950
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
951 static void ReplaceInstanceInternal(ParsedDicomFile& toModify,
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
952 const Removals& removals,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
953 const Replacements& replacements,
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
954 DicomReplaceMode mode,
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
955 bool removePrivateTags)
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
956 {
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
957 if (removePrivateTags)
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
958 {
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
959 toModify.RemovePrivateTags();
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
960 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
961
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
962 for (Removals::const_iterator it = removals.begin();
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
963 it != removals.end(); it++)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
964 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
965 toModify.Remove(*it);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
966 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
967
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
968 for (Replacements::const_iterator it = replacements.begin();
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
969 it != replacements.end(); it++)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
970 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
971 toModify.Replace(it->first, it->second, mode);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
972 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
973
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
974 // A new SOP instance UID is automatically generated
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
975 std::string instanceUid = FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Instance);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
976 toModify.Replace(DICOM_TAG_SOP_INSTANCE_UID, instanceUid, DicomReplaceMode_InsertIfAbsent);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
977 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
978
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
979
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
980 static void ParseRemovals(Removals& target,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
981 const Json::Value& removals)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
982 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
983 if (!removals.isArray())
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
984 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
985 throw OrthancException(ErrorCode_BadRequest);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
986 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
987
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
988 target.clear();
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
989
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
990 for (Json::Value::ArrayIndex i = 0; i < removals.size(); i++)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
991 {
357
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
992 std::string name = removals[i].asString();
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
993 DicomTag tag = FromDcmtkBridge::ParseTag(name);
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
994 target.insert(tag);
357
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
995
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
996 VLOG(1) << "Removal: " << name << " " << tag << std::endl;
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
997 }
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
998 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
999
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1000
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1001 static void ParseReplacements(Replacements& target,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1002 const Json::Value& replacements)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1003 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1004 if (!replacements.isObject())
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1005 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1006 throw OrthancException(ErrorCode_BadRequest);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1007 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1008
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1009 target.clear();
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1010
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1011 Json::Value::Members members = replacements.getMemberNames();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1012 for (size_t i = 0; i < members.size(); i++)
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1013 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1014 const std::string& name = members[i];
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1015 std::string value = replacements[name].asString();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1016
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1017 DicomTag tag = FromDcmtkBridge::ParseTag(name);
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1018 target[tag] = value;
357
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1019
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1020 VLOG(1) << "Replacement: " << name << " " << tag << " == " << value << std::endl;
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1021 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1022 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1023
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1024
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1025 static std::string GeneratePatientName(ServerContext& context)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1026 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1027 uint64_t seq = context.GetIndex().IncrementGlobalSequence(GlobalProperty_AnonymizationSequence);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1028 return "Anonymized" + boost::lexical_cast<std::string>(seq);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1029 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1030
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1031
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1032 static void SetupAnonymization(Removals& removals,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1033 Replacements& replacements)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1034 {
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1035 // This is Table E.1-1 from PS 3.15-2008 - DICOM Part 15: Security and System Management Profiles
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1036 removals.insert(DicomTag(0x0008, 0x0014)); // Instance Creator UID
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1037 //removals.insert(DicomTag(0x0008, 0x0018)); // SOP Instance UID => set by ReplaceInstanceInternal()
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1038 removals.insert(DicomTag(0x0008, 0x0050)); // Accession Number
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1039 removals.insert(DicomTag(0x0008, 0x0080)); // Institution Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1040 removals.insert(DicomTag(0x0008, 0x0081)); // Institution Address
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1041 removals.insert(DicomTag(0x0008, 0x0090)); // Referring Physician's Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1042 removals.insert(DicomTag(0x0008, 0x0092)); // Referring Physician's Address
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1043 removals.insert(DicomTag(0x0008, 0x0094)); // Referring Physician's Telephone Numbers
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1044 removals.insert(DicomTag(0x0008, 0x1010)); // Station Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1045 removals.insert(DicomTag(0x0008, 0x1030)); // Study Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1046 removals.insert(DicomTag(0x0008, 0x103e)); // Series Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1047 removals.insert(DicomTag(0x0008, 0x1040)); // Institutional Department Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1048 removals.insert(DicomTag(0x0008, 0x1048)); // Physician(s) of Record
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1049 removals.insert(DicomTag(0x0008, 0x1050)); // Performing Physicians' Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1050 removals.insert(DicomTag(0x0008, 0x1060)); // Name of Physician(s) Reading Study
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1051 removals.insert(DicomTag(0x0008, 0x1070)); // Operators' Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1052 removals.insert(DicomTag(0x0008, 0x1080)); // Admitting Diagnoses Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1053 removals.insert(DicomTag(0x0008, 0x1155)); // Referenced SOP Instance UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1054 removals.insert(DicomTag(0x0008, 0x2111)); // Derivation Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1055 removals.insert(DicomTag(0x0010, 0x0010)); // Patient's Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1056 removals.insert(DicomTag(0x0010, 0x0020)); // Patient ID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1057 removals.insert(DicomTag(0x0010, 0x0030)); // Patient's Birth Date
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1058 removals.insert(DicomTag(0x0010, 0x0032)); // Patient's Birth Time
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1059 removals.insert(DicomTag(0x0010, 0x0040)); // Patient's Sex
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1060 removals.insert(DicomTag(0x0010, 0x1000)); // Other Patient Ids
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1061 removals.insert(DicomTag(0x0010, 0x1001)); // Other Patient Names
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1062 removals.insert(DicomTag(0x0010, 0x1010)); // Patient's Age
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1063 removals.insert(DicomTag(0x0010, 0x1020)); // Patient's Size
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1064 removals.insert(DicomTag(0x0010, 0x1030)); // Patient's Weight
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1065 removals.insert(DicomTag(0x0010, 0x1090)); // Medical Record Locator
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1066 removals.insert(DicomTag(0x0010, 0x2160)); // Ethnic Group
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1067 removals.insert(DicomTag(0x0010, 0x2180)); // Occupation
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1068 removals.insert(DicomTag(0x0010, 0x21b0)); // Additional Patient's History
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1069 removals.insert(DicomTag(0x0010, 0x4000)); // Patient Comments
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1070 removals.insert(DicomTag(0x0018, 0x1000)); // Device Serial Number
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1071 removals.insert(DicomTag(0x0018, 0x1030)); // Protocol Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1072 //removals.insert(DicomTag(0x0020, 0x000d)); // Study Instance UID => generated below
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1073 //removals.insert(DicomTag(0x0020, 0x000e)); // Series Instance UID => generated below
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1074 removals.insert(DicomTag(0x0020, 0x0010)); // Study ID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1075 removals.insert(DicomTag(0x0020, 0x0052)); // Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1076 removals.insert(DicomTag(0x0020, 0x0200)); // Synchronization Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1077 removals.insert(DicomTag(0x0020, 0x4000)); // Image Comments
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1078 removals.insert(DicomTag(0x0040, 0x0275)); // Request Attributes Sequence
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1079 removals.insert(DicomTag(0x0040, 0xa124)); // UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1080 removals.insert(DicomTag(0x0040, 0xa730)); // Content Sequence
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1081 removals.insert(DicomTag(0x0088, 0x0140)); // Storage Media File-set UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1082 removals.insert(DicomTag(0x3006, 0x0024)); // Referenced Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1083 removals.insert(DicomTag(0x3006, 0x00c2)); // Related Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1084
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1085 // Some more removals (from the experience of DICOM files at the CHU of Liege)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1086 removals.insert(DicomTag(0x0010, 0x1040)); // Patient's Address
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1087 removals.insert(DicomTag(0x0032, 0x1032)); // Requesting Physician
463
005aaeb63414 anonymization of PatientTelephoneNumbers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 446
diff changeset
1088 removals.insert(DicomTag(0x0010, 0x2154)); // PatientTelephoneNumbers
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1089
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1090 // Set the DeidentificationMethod tag
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1091 replacements.insert(std::make_pair(DicomTag(0x0012, 0x0063), "Orthanc " ORTHANC_VERSION " - PS 3.15-2008 Table E.1-1"));
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1092
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1093 // Set the PatientIdentityRemoved
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1094 replacements.insert(std::make_pair(DicomTag(0x0012, 0x0062), "YES"));
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1095
321
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1096 // Generate random study UID if not specified
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1097 if (replacements.find(DICOM_TAG_STUDY_INSTANCE_UID) == replacements.end())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1098 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1099 replacements.insert(std::make_pair(DICOM_TAG_STUDY_INSTANCE_UID,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1100 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Study)));
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1101 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1102
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1103 // Generate random series UID if not specified
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1104 if (replacements.find(DICOM_TAG_SERIES_INSTANCE_UID) == replacements.end())
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1105 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1106 replacements.insert(std::make_pair(DICOM_TAG_SERIES_INSTANCE_UID,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1107 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Series)));
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1108 }
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1109 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1110
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1111
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1112 static bool ParseModifyRequest(Removals& removals,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1113 Replacements& replacements,
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1114 bool& removePrivateTags,
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1115 const RestApi::PostCall& call)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1116 {
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1117 removePrivateTags = false;
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1118 Json::Value request;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1119 if (call.ParseJsonRequest(request) &&
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1120 request.isObject())
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1121 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1122 Json::Value removalsPart = Json::arrayValue;
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1123 Json::Value replacementsPart = Json::objectValue;
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1124
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1125 if (request.isMember("Remove"))
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1126 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1127 removalsPart = request["Remove"];
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1128 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1129
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1130 if (request.isMember("Replace"))
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1131 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1132 replacementsPart = request["Replace"];
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1133 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1134
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1135 if (request.isMember("RemovePrivateTags"))
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1136 {
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1137 removePrivateTags = true;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1138 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1139
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1140 ParseRemovals(removals, removalsPart);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1141 ParseReplacements(replacements, replacementsPart);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1142
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1143 return true;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1144 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1145 else
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1146 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1147 return false;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1148 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1149 }
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1150
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1151
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1152 static bool ParseAnonymizationRequest(Removals& removals,
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1153 Replacements& replacements,
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1154 bool& removePrivateTags,
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1155 RestApi::PostCall& call)
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1156 {
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1157 RETRIEVE_CONTEXT(call);
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1158
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1159 removePrivateTags = true;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1160
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1161 Json::Value request;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1162 if (call.ParseJsonRequest(request) &&
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1163 request.isObject())
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1164 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1165 Json::Value keepPart = Json::arrayValue;
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1166 Json::Value removalsPart = Json::arrayValue;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1167 Json::Value replacementsPart = Json::objectValue;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1168
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1169 if (request.isMember("Keep"))
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1170 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1171 keepPart = request["Keep"];
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1172 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1173
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1174 if (request.isMember("KeepPrivateTags"))
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1175 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1176 removePrivateTags = false;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1177 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1178
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1179 if (request.isMember("Replace"))
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1180 {
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1181 replacementsPart = request["Replace"];
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1182 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1183
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1184 Removals toKeep;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1185 ParseRemovals(toKeep, keepPart);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1186
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1187 SetupAnonymization(removals, replacements);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1188
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1189 for (Removals::iterator it = toKeep.begin(); it != toKeep.end(); it++)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1190 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1191 removals.erase(*it);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1192 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1193
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1194 Removals additionalRemovals;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1195 ParseRemovals(additionalRemovals, removalsPart);
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1196
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1197 for (Removals::iterator it = additionalRemovals.begin();
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1198 it != additionalRemovals.end(); it++)
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1199 {
321
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1200 removals.insert(*it);
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1201 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1202
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1203 ParseReplacements(replacements, replacementsPart);
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1204
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1205 // Generate random Patient's Name if none is specified
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1206 if (replacements.find(DicomTag(0x0010, 0x0010)) == replacements.end())
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1207 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1208 replacements.insert(std::make_pair(DicomTag(0x0010, 0x0010), GeneratePatientName(context)));
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1209 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1210
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1211 // Generate random Patient's ID if none is specified
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1212 if (replacements.find(DICOM_TAG_PATIENT_ID) == replacements.end())
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1213 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1214 replacements.insert(std::make_pair(DICOM_TAG_PATIENT_ID,
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1215 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Patient)));
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1216 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1217
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1218 return true;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1219 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1220 else
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1221 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1222 return false;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1223 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1224 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1225
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1226
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1227 static void AnonymizeOrModifyInstance(Removals& removals,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1228 Replacements& replacements,
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1229 bool removePrivateTags,
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1230 RestApi::PostCall& call)
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1231 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 314
diff changeset
1232 boost::mutex::scoped_lock lock(cacheMutex_);
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1233 RETRIEVE_CONTEXT(call);
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1234
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1235 std::string id = call.GetUriComponent("id", "");
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1236 ParsedDicomFile& dicom = context.GetDicomFile(id);
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1237
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1238 std::auto_ptr<ParsedDicomFile> modified(dicom.Clone());
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1239 ReplaceInstanceInternal(*modified, removals, replacements, DicomReplaceMode_InsertIfAbsent, removePrivateTags);
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1240 modified->Answer(call.GetOutput());
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1241 }
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1242
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1243
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1244 static bool RetrieveMappedUid(ParsedDicomFile& dicom,
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1245 DicomRootLevel level,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1246 Replacements& replacements,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1247 UidMap& uidMap)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1248 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1249 std::auto_ptr<DicomTag> tag;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1250 if (level == DicomRootLevel_Series)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1251 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1252 tag.reset(new DicomTag(DICOM_TAG_SERIES_INSTANCE_UID));
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1253 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1254 else
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1255 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1256 assert(level == DicomRootLevel_Study);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1257 tag.reset(new DicomTag(DICOM_TAG_STUDY_INSTANCE_UID));
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1258 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1259
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1260 std::string original;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1261 if (!dicom.GetTagValue(original, *tag))
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1262 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1263 throw OrthancException(ErrorCode_InternalError);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1264 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1265
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1266 std::string mapped;
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1267 bool isNew;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1268
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1269 UidMap::const_iterator previous = uidMap.find(std::make_pair(level, original));
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1270 if (previous == uidMap.end())
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1271 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1272 mapped = FromDcmtkBridge::GenerateUniqueIdentifier(level);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1273 uidMap.insert(std::make_pair(std::make_pair(level, original), mapped));
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1274 isNew = true;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1275 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1276 else
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1277 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1278 mapped = previous->second;
349
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1279 isNew = false;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1280 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1281
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1282 replacements[*tag] = mapped;
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1283 return isNew;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1284 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1285
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1286
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1287 static void AnonymizeOrModifyResource(Removals& removals,
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1288 Replacements& replacements,
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1289 bool removePrivateTags,
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1290 MetadataType metadataType,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1291 ChangeType changeType,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1292 ResourceType resourceType,
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1293 RestApi::PostCall& call)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1294 {
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1295 typedef std::list<std::string> Instances;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1296
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1297 bool isFirst = true;
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1298 Json::Value result(Json::objectValue);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1299
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1300 boost::mutex::scoped_lock lock(cacheMutex_);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1301 RETRIEVE_CONTEXT(call);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1302
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1303 Instances instances;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1304 std::string id = call.GetUriComponent("id", "");
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1305 context.GetIndex().GetChildInstances(instances, id);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1306
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1307 if (instances.size() == 0)
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1308 {
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1309 return;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1310 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1311
349
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1312
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1313 /**
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1314 * Loop over all the instances of the resource.
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1315 **/
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1316
348
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1317 UidMap uidMap;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1318 for (Instances::const_iterator it = instances.begin();
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1319 it != instances.end(); it++)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1320 {
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1321 LOG(INFO) << "Modifying instance " << *it;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1322 ParsedDicomFile& original = context.GetDicomFile(*it);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1323
349
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1324 bool isNewSeries = RetrieveMappedUid(original, DicomRootLevel_Series, replacements, uidMap);
348
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1325
349
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1326 bool isNewStudy = false;
348
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1327 if (resourceType == ResourceType_Study ||
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1328 resourceType == ResourceType_Patient)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1329 {
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1330 isNewStudy = RetrieveMappedUid(original, DicomRootLevel_Study, replacements, uidMap);
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1331 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1332
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1333 /**
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1334 * Compute the resulting DICOM instance and store it into the Orthanc store.
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1335 **/
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1336
348
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1337 std::auto_ptr<ParsedDicomFile> modified(original.Clone());
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1338 ReplaceInstanceInternal(*modified, removals, replacements, DicomReplaceMode_InsertIfAbsent, removePrivateTags);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1339
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1340 std::string modifiedInstance;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1341 if (context.Store(modifiedInstance, modified->GetDicom()) != StoreStatus_Success)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1342 {
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1343 LOG(ERROR) << "Error while storing a modified instance " << *it;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1344 return;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1345 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1346
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1347
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1348 /**
443
be93b666ed79 link anonymized to original resource in OrthancExplorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1349 * Record metadata information (AnonymizedFrom/ModifiedFrom).
349
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1350 **/
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1351
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1352 DicomInstanceHasher modifiedHasher = modified->GetHasher();
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1353 DicomInstanceHasher originalHasher = original.GetHasher();
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1354
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1355 if (isNewSeries)
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1356 {
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1357 context.GetIndex().SetMetadata(modifiedHasher.HashSeries(),
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1358 metadataType, originalHasher.HashSeries());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1359 }
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1360
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1361 if (isNewStudy)
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1362 {
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1363 context.GetIndex().SetMetadata(modifiedHasher.HashStudy(),
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1364 metadataType, originalHasher.HashStudy());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1365 }
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1366
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1367 assert(*it == originalHasher.HashInstance());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1368 assert(modifiedInstance == modifiedHasher.HashInstance());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1369 context.GetIndex().SetMetadata(modifiedInstance, metadataType, *it);
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1370
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1371
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1372 /**
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1373 * Compute the JSON object that is returned by the REST call.
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1374 **/
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1375
348
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1376 if (isFirst)
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1377 {
443
be93b666ed79 link anonymized to original resource in OrthancExplorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1378 context.GetIndex().SetMetadata(modifiedHasher.HashPatient(),
be93b666ed79 link anonymized to original resource in OrthancExplorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1379 metadataType, originalHasher.HashPatient());
be93b666ed79 link anonymized to original resource in OrthancExplorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1380
348
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1381 std::string newId;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1382
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1383 switch (resourceType)
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1384 {
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1385 case ResourceType_Series:
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1386 newId = modifiedHasher.HashSeries();
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1387 break;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1388
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1389 case ResourceType_Study:
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1390 newId = modifiedHasher.HashStudy();
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1391 break;
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parents: 344
diff changeset
1392
1082e8121d10 refactoring anonymization/modification
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diff changeset
1393 case ResourceType_Patient:
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parents: 344
diff changeset
1394 newId = modifiedHasher.HashPatient();
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1395 break;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1396
1082e8121d10 refactoring anonymization/modification
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diff changeset
1397 default:
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parents: 344
diff changeset
1398 throw OrthancException(ErrorCode_InternalError);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1399 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1400
434
ccf3a0a43dac EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 418
diff changeset
1401 result["Type"] = EnumerationToString(resourceType);
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1402 result["ID"] = newId;
348
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1403 result["Path"] = GetBasePath(resourceType, newId);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1404 result["PatientID"] = modifiedHasher.HashPatient();
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1405 isFirst = false;
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parents: 344
diff changeset
1406 }
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parents: 344
diff changeset
1407 }
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parents: 344
diff changeset
1408
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
1409 call.GetOutput().AnswerJson(result);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1410 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1411
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1412
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1413
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1414 static void ModifyInstance(RestApi::PostCall& call)
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1415 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1416 Removals removals;
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1417 Replacements replacements;
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1418 bool removePrivateTags;
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1419
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1420 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1421 {
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1422 AnonymizeOrModifyInstance(removals, replacements, removePrivateTags, call);
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1423 }
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1424 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1425
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1426
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1427 static void AnonymizeInstance(RestApi::PostCall& call)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1428 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1429 Removals removals;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1430 Replacements replacements;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1431 bool removePrivateTags;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1432
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1433 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1434 {
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1435 AnonymizeOrModifyInstance(removals, replacements, removePrivateTags, call);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1436 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1437 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1438
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1439
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1440 static void ModifySeriesInplace(RestApi::PostCall& call)
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1441 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1442 Removals removals;
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1443 Replacements replacements;
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1444 bool removePrivateTags;
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1445
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1446 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1447 {
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1448 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1449 MetadataType_ModifiedFrom, ChangeType_ModifiedSeries,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1450 ResourceType_Series, call);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1451 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1452 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 314
diff changeset
1453
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1454
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1455 static void AnonymizeSeriesInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1456 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1457 Removals removals;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1458 Replacements replacements;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1459 bool removePrivateTags;
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1460
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1461 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1462 {
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1463 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1464 MetadataType_AnonymizedFrom, ChangeType_AnonymizedSeries,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1465 ResourceType_Series, call);
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1466 }
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1467 }
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1468
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1469
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1470 static void ModifyStudyInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1471 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1472 Removals removals;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1473 Replacements replacements;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1474 bool removePrivateTags;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1475
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1476 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1477 {
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1478 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1479 MetadataType_ModifiedFrom, ChangeType_ModifiedStudy,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1480 ResourceType_Study, call);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1481 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1482 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1483
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1484
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1485 static void AnonymizeStudyInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1486 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1487 Removals removals;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1488 Replacements replacements;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1489 bool removePrivateTags;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1490
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1491 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1492 {
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1493 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1494 MetadataType_AnonymizedFrom, ChangeType_AnonymizedStudy,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1495 ResourceType_Study, call);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1496 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1497 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1498
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1499
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1500 static void ModifyPatientInplace(RestApi::PostCall& call)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1501 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1502 Removals removals;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1503 Replacements replacements;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1504 bool removePrivateTags;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1505
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1506 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1507 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1508 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1509 MetadataType_ModifiedFrom, ChangeType_ModifiedPatient,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1510 ResourceType_Patient, call);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1511 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1512 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1514
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1515 static void AnonymizePatientInplace(RestApi::PostCall& call)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1516 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1517 Removals removals;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1518 Replacements replacements;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1519 bool removePrivateTags;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1520
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1521 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, call))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1522 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1523 AnonymizeOrModifyResource(removals, replacements, removePrivateTags,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1524 MetadataType_AnonymizedFrom, ChangeType_AnonymizedPatient,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1525 ResourceType_Patient, call);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1526 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1527 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1528
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1529
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1530 // Handling of metadata -----------------------------------------------------
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1531
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1532 static void ListMetadata(RestApi::GetCall& call)
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1533 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1534 RETRIEVE_CONTEXT(call);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1535
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1536 std::string publicId = call.GetUriComponent("id", "");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1537 std::list<MetadataType> metadata;
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1538 if (context.GetIndex().ListAvailableMetadata(metadata, publicId))
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1539 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1540 Json::Value result = Json::arrayValue;
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1541
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1542 for (std::list<MetadataType>::const_iterator
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1543 it = metadata.begin(); it != metadata.end(); it++)
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1544 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1545 result.append(EnumerationToString(*it));
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1546 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1547
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1548 call.GetOutput().AnswerJson(result);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1549 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1550 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1551
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1552
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1553 static void GetMetadata(RestApi::GetCall& call)
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1554 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1555 RETRIEVE_CONTEXT(call);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1556
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1557 std::string publicId = call.GetUriComponent("id", "");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1558 std::string name = call.GetUriComponent("name", "");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1559 MetadataType metadata = StringToMetadata(name);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1560
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1561 std::string value;
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1562 if (context.GetIndex().LookupMetadata(value, publicId, metadata))
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1563 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1564 call.GetOutput().AnswerBuffer(value, "text/plain");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1565 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1566 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1567
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
1568
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1569 static void DeleteMetadata(RestApi::DeleteCall& call)
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1570 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1571 RETRIEVE_CONTEXT(call);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1572
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1573 std::string publicId = call.GetUriComponent("id", "");
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1574 std::string name = call.GetUriComponent("name", "");
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1575 MetadataType metadata = StringToMetadata(name);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1576
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1577 if (metadata >= MetadataType_StartUser &&
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1578 metadata <= MetadataType_EndUser)
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1579 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1580 // It is forbidden to modify internal metadata
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1581 context.GetIndex().DeleteMetadata(publicId, metadata);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1582 call.GetOutput().AnswerBuffer("", "text/plain");
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1583 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1584 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1585
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1586
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1587 static void SetMetadata(RestApi::PutCall& call)
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1588 {
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1589 RETRIEVE_CONTEXT(call);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1590
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1591 std::string publicId = call.GetUriComponent("id", "");
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1592 std::string name = call.GetUriComponent("name", "");
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1593 MetadataType metadata = StringToMetadata(name);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1594 std::string value = call.GetPutBody();
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1595
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1596 if (metadata >= MetadataType_StartUser &&
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1597 metadata <= MetadataType_EndUser)
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1598 {
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1599 // It is forbidden to modify internal metadata
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1600 context.GetIndex().SetMetadata(publicId, metadata, value);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1601 call.GetOutput().AnswerBuffer("", "text/plain");
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1602 }
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1603 }
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1604
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1605
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1606 static void GetResourceStatistics(RestApi::GetCall& call)
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1607 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1608 RETRIEVE_CONTEXT(call);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1609 std::string publicId = call.GetUriComponent("id", "");
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1610 Json::Value result;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1611 context.GetIndex().GetStatistics(result, publicId);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1612 call.GetOutput().AnswerJson(result);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1613 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1614
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1615
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1616
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1617 // Orthanc Peers ------------------------------------------------------------
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1618
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1619 static bool IsExistingPeer(const OrthancRestApi::SetOfStrings& peers,
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1620 const std::string& id)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1621 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1622 return peers.find(id) != peers.end();
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1623 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1624
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1625 static void ListPeers(RestApi::GetCall& call)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1626 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1627 RETRIEVE_PEERS(call);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1628
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1629 Json::Value result = Json::arrayValue;
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1630 for (OrthancRestApi::SetOfStrings::const_iterator
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1631 it = peers.begin(); it != peers.end(); it++)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1632 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1633 result.append(*it);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1634 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1635
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1636 call.GetOutput().AnswerJson(result);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1637 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1638
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1639 static void ListPeerOperations(RestApi::GetCall& call)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1640 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1641 RETRIEVE_PEERS(call);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1642
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1643 std::string id = call.GetUriComponent("id", "");
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1644 if (IsExistingPeer(peers, id))
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1645 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1646 Json::Value result = Json::arrayValue;
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1647 result.append("store");
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1648 call.GetOutput().AnswerJson(result);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1649 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1650 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1651
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1652
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1653
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1654
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1655 // Registration of the various REST handlers --------------------------------
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1656
230
ae2367145b49 renames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 229
diff changeset
1657 OrthancRestApi::OrthancRestApi(ServerContext& context) :
224
4eb0c7ce86c9 refactoring for store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
1658 context_(context)
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1659 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1660 GetListOfDicomModalities(modalities_);
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1661 GetListOfOrthancPeers(peers_);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1662
211
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1663 Register("/", ServeRoot);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1664 Register("/system", GetSystemInformation);
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
1665 Register("/statistics", GetStatistics);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1666 Register("/changes", GetChanges);
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
1667 Register("/changes", DeleteChanges);
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1668 Register("/exports", GetExports);
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
1669 Register("/exports", DeleteExports);
211
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1670
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
1671 Register("/instances", UploadDicomFile);
211
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1672 Register("/instances", ListResources<ResourceType_Instance>);
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1673 Register("/patients", ListResources<ResourceType_Patient>);
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1674 Register("/series", ListResources<ResourceType_Series>);
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1675 Register("/studies", ListResources<ResourceType_Study>);
212
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1676
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1677 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1678 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1679 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1680 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1681 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1682 Register("/series/{id}", GetSingleResource<ResourceType_Series>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1683 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1684 Register("/studies/{id}", GetSingleResource<ResourceType_Study>);
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1685
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1686 Register("/patients/{id}/archive", GetArchive<ResourceType_Patient>);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1687 Register("/studies/{id}/archive", GetArchive<ResourceType_Study>);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1688 Register("/series/{id}/archive", GetArchive<ResourceType_Series>);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1689
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1690 Register("/instances/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1691 Register("/patients/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1692 Register("/studies/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1693 Register("/series/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1694
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1695 Register("/instances/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1696 Register("/instances/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1697 Register("/instances/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1698 Register("/instances/{id}/metadata/{name}", SetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1699 Register("/patients/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1700 Register("/patients/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1701 Register("/patients/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1702 Register("/patients/{id}/metadata/{name}", SetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1703 Register("/series/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1704 Register("/series/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1705 Register("/series/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1706 Register("/series/{id}/metadata/{name}", SetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1707 Register("/studies/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1708 Register("/studies/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1709 Register("/studies/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1710 Register("/studies/{id}/metadata/{name}", SetMetadata);
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1711
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
1712 Register("/patients/{id}/protected", IsProtectedPatient);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
1713 Register("/patients/{id}/protected", SetPatientProtection);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1714 Register("/instances/{id}/file", GetInstanceFile);
483
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
1715 Register("/instances/{id}/export", ExportInstanceFile);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1716 Register("/instances/{id}/tags", GetInstanceTags<false>);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1717 Register("/instances/{id}/simplified-tags", GetInstanceTags<true>);
214
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1718 Register("/instances/{id}/frames", ListFrames);
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
1719 Register("/instances/{id}/content/*", GetRawContent);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1720
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1721 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1722 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1723 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>);
465
7a966b440f19 signed images to PNG
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 463
diff changeset
1724 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>);
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1725 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1726 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1727 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>);
465
7a966b440f19 signed images to PNG
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 463
diff changeset
1728 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>);
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1729
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1730 Register("/modalities", ListModalities);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1731 Register("/modalities/{id}", ListModalityOperations);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1732 Register("/modalities/{id}/find-patient", DicomFindPatient);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1733 Register("/modalities/{id}/find-study", DicomFindStudy);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1734 Register("/modalities/{id}/find-series", DicomFindSeries);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1735 Register("/modalities/{id}/find", DicomFind);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1736 Register("/modalities/{id}/store", DicomStore);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1737
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1738 Register("/peers", ListPeers);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1739 Register("/peers/{id}", ListPeerOperations);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1740
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1741 Register("/instances/{id}/modify", ModifyInstance);
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1742 Register("/series/{id}/modify", ModifySeriesInplace);
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1743 Register("/studies/{id}/modify", ModifyStudyInplace);
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1744 Register("/patients/{id}/modify", ModifyPatientInplace);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1745
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1746 Register("/instances/{id}/anonymize", AnonymizeInstance);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1747 Register("/series/{id}/anonymize", AnonymizeSeriesInplace);
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1748 Register("/studies/{id}/anonymize", AnonymizeStudyInplace);
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1749 Register("/patients/{id}/anonymize", AnonymizePatientInplace);
342
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
1750
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
1751 Register("/tools/generate-uid", GenerateUid);
418
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
1752 Register("/tools/execute-script", ExecuteScript);
446
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
1753 Register("/tools/now", GetNowIsoString);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1754 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1755 }