Mercurial > hg > orthanc

annotate OrthancServer/Sources/ServerJobs/MergeStudyJob.cpp @ 4785:61da49321754 openssl-3.x

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integration mainline->openssl-3.x
author Sebastien Jodogne <s.jodogne@gmail.com>
date Mon, 30 Aug 2021 22:21:24 +0200
parents 783f8a048035
children 70d2a97ca8cb
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License as
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9 * published by the Free Software Foundation, either version 3 of the
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10 * License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU General Public License
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18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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19 **/
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22 #include "MergeStudyJob.h"
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23
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24 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h"
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25 #include "../../../OrthancFramework/Sources/Logging.h"
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26 #include "../../../OrthancFramework/Sources/SerializationToolbox.h"
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27 #include "../OrthancConfiguration.h"
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28 #include "../ServerContext.h"
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31 namespace Orthanc
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32 {
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33 static void RegisterSeries(std::map<std::string, std::string>& target,
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34 const std::string& series)
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35 {
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36 // Generate a target SeriesInstanceUID for this series
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37 if (target.find(series) == target.end())
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38 {
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39 target[series] = FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Series);
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40 }
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41 }
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44 void MergeStudyJob::AddSourceSeriesInternal(const std::string& series)
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45 {
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46 RegisterSeries(seriesUidMap_, series);
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48 // Add all the instances of the series as to be processed
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49 std::list<std::string> instances;
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50 GetContext().GetIndex().GetChildren(instances, series);
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51
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52 for (std::list<std::string>::const_iterator
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53 it = instances.begin(); it != instances.end(); ++it)
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54 {
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55 AddInstance(*it);
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56 }
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57 }
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60 void MergeStudyJob::AddSourceStudyInternal(const std::string& study)
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61 {
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62 if (study == targetStudy_)
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63 {
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64 throw OrthancException(ErrorCode_UnknownResource,
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65 "Cannot merge a study into the same study: " + study);
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66 }
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67 else
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68 {
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69 std::list<std::string> series;
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70 GetContext().GetIndex().GetChildren(series, study);
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71
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72 for (std::list<std::string>::const_iterator
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73 it = series.begin(); it != series.end(); ++it)
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74 {
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75 AddSourceSeriesInternal(*it);
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76 }
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77 }
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78 }
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79
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80
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81 bool MergeStudyJob::HandleInstance(const std::string& instance)
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82 {
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83 if (!HasTrailingStep())
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84 {
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85 throw OrthancException(ErrorCode_BadSequenceOfCalls,
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86 "AddTrailingStep() should have been called after AddSourceXXX()");
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87 }
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88
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89 /**
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90 * Retrieve the DICOM instance to be modified
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91 **/
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92
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93 std::unique_ptr<ParsedDicomFile> modified;
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94
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95 try
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96 {
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97 ServerContext::DicomCacheLocker locker(GetContext(), instance);
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98 modified.reset(locker.GetDicom().Clone(true));
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99 }
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100 catch (OrthancException&)
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101 {
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102 LOG(WARNING) << "An instance was removed after the job was issued: " << instance;
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103 return false;
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104 }
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105
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106
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107 /**
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108 * Chose the target UIDs
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109 **/
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110
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111 std::string series = modified->GetHasher().HashSeries();
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112
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113 SeriesUidMap::const_iterator targetSeriesUid = seriesUidMap_.find(series);
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114
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115 if (targetSeriesUid == seriesUidMap_.end())
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116 {
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117 throw OrthancException(ErrorCode_BadFileFormat); // Should never happen
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118 }
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119
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120
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121 /**
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122 * Copy the tags from the "Patient Module Attributes" and "General
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123 * Study Module Attributes" modules of the target study
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124 **/
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125
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126 for (std::set<DicomTag>::const_iterator it = removals_.begin();
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127 it != removals_.end(); ++it)
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128 {
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129 modified->Remove(*it);
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130 }
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131
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132 for (Replacements::const_iterator it = replacements_.begin();
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133 it != replacements_.end(); ++it)
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134 {
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135 modified->ReplacePlainString(it->first, it->second);
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136 }
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137
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138
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139 /**
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140 * Store the new instance into Orthanc
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141 **/
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142
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143 modified->ReplacePlainString(DICOM_TAG_SERIES_INSTANCE_UID, targetSeriesUid->second);
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144
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145 // Fix since Orthanc 1.5.8: Assign new "SOPInstanceUID", as the instance has been modified
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146 modified->ReplacePlainString(DICOM_TAG_SOP_INSTANCE_UID, FromDcmtkBridge::GenerateUniqueIdentifier(ResourceType_Instance));
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147
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148 std::unique_ptr<DicomInstanceToStore> toStore(DicomInstanceToStore::CreateFromParsedDicomFile(*modified));
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149 toStore->SetOrigin(origin_);
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150
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151 std::string modifiedInstance;
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152 if (GetContext().Store(modifiedInstance, *toStore,
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153 StoreInstanceMode_Default) != StoreStatus_Success)
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154 {
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155 LOG(ERROR) << "Error while storing a modified instance " << instance;
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156 return false;
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157 }
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158
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159 return true;
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160 }
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161
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162
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163 MergeStudyJob::MergeStudyJob(ServerContext& context,
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164 const std::string& targetStudy) :
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165 CleaningInstancesJob(context, false /* by default, remove source instances */),
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166 targetStudy_(targetStudy)
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167 {
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168 /**
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169 * Check the validity of the input ID
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170 **/
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171
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172 ResourceType type;
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173
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174 if (!GetContext().GetIndex().LookupResourceType(type, targetStudy) ||
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175 type != ResourceType_Study)
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176 {
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177 throw OrthancException(ErrorCode_UnknownResource,
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178 "Cannot merge into an unknown study: " + targetStudy);
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179 }
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180
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181
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182 /**
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183 * Detect the tags to be removed/replaced by parsing one child
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184 * instance of the study
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185 **/
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186
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187 DicomTag::AddTagsForModule(removals_, DicomModule_Patient);
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188 DicomTag::AddTagsForModule(removals_, DicomModule_Study);
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189
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190 std::list<std::string> instances;
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191 GetContext().GetIndex().GetChildInstances(instances, targetStudy);
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192
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193 if (instances.empty())
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194 {
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195 throw OrthancException(ErrorCode_UnknownResource);
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196 }
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197
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198 DicomMap dicom;
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199
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200 {
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201 ServerContext::DicomCacheLocker locker(GetContext(), instances.front());
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202 OrthancConfiguration::DefaultExtractDicomSummary(dicom, locker.GetDicom());
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203 }
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204
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205 const std::set<DicomTag> moduleTags = removals_;
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206 for (std::set<DicomTag>::const_iterator it = moduleTags.begin();
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207 it != moduleTags.end(); ++it)
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208 {
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209 const DicomValue* value = dicom.TestAndGetValue(*it);
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210 std::string str;
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211
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212 if (value != NULL &&
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213 value->CopyToString(str, false))
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214 {
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215 removals_.erase(*it);
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216 replacements_.insert(std::make_pair(*it, str));
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217 }
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218 }
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219 }
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220
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221
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222 void MergeStudyJob::SetOrigin(const DicomInstanceOrigin& origin)
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223 {
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224 if (IsStarted())
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225 {
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226 throw OrthancException(ErrorCode_BadSequenceOfCalls);
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227 }
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228 else
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229 {
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230 origin_ = origin;
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231 }
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232 }
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233
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234
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235 void MergeStudyJob::SetOrigin(const RestApiCall& call)
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236 {
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237 SetOrigin(DicomInstanceOrigin::FromRest(call));
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238 }
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239
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240
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241 void MergeStudyJob::AddSource(const std::string& publicId)
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242 {
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243 ResourceType level;
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244
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245 if (IsStarted())
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diff changeset
246 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
247 throw OrthancException(ErrorCode_BadSequenceOfCalls);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
248 }
4715
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diff changeset
249 else if (!GetContext().GetIndex().LookupResourceType(level, publicId))
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
250 {
2955
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diff changeset
251 throw OrthancException(ErrorCode_UnknownResource,
4715
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diff changeset
252 "Cannot find this resource: " + publicId);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
253 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
254 else
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
255 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
256 switch (level)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
257 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
258 case ResourceType_Study:
4715
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diff changeset
259 AddSourceStudyInternal(publicId);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
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parents:
diff changeset
260 break;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
261
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
262 case ResourceType_Series:
4715
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diff changeset
263 AddSourceSeries(publicId);
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
264 break;
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
265
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
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266 case ResourceType_Instance:
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
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267 AddSourceInstance(publicId);
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52b017d22a4f New URI: "/studies/.../merge" to merge a study
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parents:
diff changeset
268 break;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
269
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
270 default:
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diff changeset
271 throw OrthancException(ErrorCode_UnknownResource,
4715
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diff changeset
272 "This resource is neither a study, nor a series, nor an instance: " +
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
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273 publicId + " is a " + std::string(EnumerationToString(level)));
2853
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parents:
diff changeset
274 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
275 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
276 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
277
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
278
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
279 void MergeStudyJob::AddSourceSeries(const std::string& series)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
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280 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
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diff changeset
281 std::string parent;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
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282
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
283 if (IsStarted())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
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parents:
diff changeset
284 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
285 throw OrthancException(ErrorCode_BadSequenceOfCalls);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
286 }
3941
771dbd9eb3bd class CleaningInstancesJob to share cleaning code by merge/split jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3940
diff changeset
287 else if (!GetContext().GetIndex().LookupParent(parent, series, ResourceType_Study))
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
288 {
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289 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
290 "This resource is not a series: " + series);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
291 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
292 else if (parent == targetStudy_)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
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parents:
diff changeset
293 {
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294 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
295 "Cannot merge series " + series +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
296 " into its parent study " + targetStudy_);
2853
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
297 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
298 else
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
299 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
300 AddSourceSeriesInternal(series);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
301 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
302 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
303
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
304
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
305 void MergeStudyJob::AddSourceStudy(const std::string& study)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
306 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
307 ResourceType actualLevel;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
308
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
309 if (IsStarted())
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
310 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
311 throw OrthancException(ErrorCode_BadSequenceOfCalls);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
312 }
3941
771dbd9eb3bd class CleaningInstancesJob to share cleaning code by merge/split jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3940
diff changeset
313 else if (!GetContext().GetIndex().LookupResourceType(actualLevel, study) ||
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
314 actualLevel != ResourceType_Study)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
315 {
2955
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parents: 2860
diff changeset
316 throw OrthancException(ErrorCode_UnknownResource,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2860
diff changeset
317 "This resource is not a study: " + study);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
318 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
319 else
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
320 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
321 AddSourceStudyInternal(study);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
322 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
323 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
324
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
325
4715
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
326 void MergeStudyJob::AddSourceInstance(const std::string& instance)
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
327 {
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
328 std::string parentStudy, parentSeries;
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
329
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
330 if (IsStarted())
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
331 {
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
332 throw OrthancException(ErrorCode_BadSequenceOfCalls);
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
333 }
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
334 else if (!GetContext().GetIndex().LookupParent(parentSeries, instance, ResourceType_Series) ||
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
335 !GetContext().GetIndex().LookupParent(parentStudy, parentSeries, ResourceType_Study))
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
336 {
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
337 throw OrthancException(ErrorCode_UnknownResource,
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
338 "This resource is not an instance: " + instance);
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
339 }
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
340 else if (parentStudy == targetStudy_)
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
341 {
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
342 throw OrthancException(ErrorCode_UnknownResource,
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
343 "Cannot merge instance " + instance +
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
344 " into its parent study " + targetStudy_);
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
345 }
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
346 else
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
347 {
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
348 RegisterSeries(seriesUidMap_, parentSeries);
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
349 AddInstance(instance);
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
350 }
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
351 }
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
352
fb98db281d1d "/studies/{id}/merge" accepts instances inside its "Resources" parameter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
353
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
354 void MergeStudyJob::GetPublicContent(Json::Value& value)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
355 {
3941
771dbd9eb3bd class CleaningInstancesJob to share cleaning code by merge/split jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3940
diff changeset
356 CleaningInstancesJob::GetPublicContent(value);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
357 value["TargetStudy"] = targetStudy_;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
358 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
359
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
360
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
361 static const char* TARGET_STUDY = "TargetStudy";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
362 static const char* REPLACEMENTS = "Replacements";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
363 static const char* REMOVALS = "Removals";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
364 static const char* SERIES_UID_MAP = "SeriesUIDMap";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
365 static const char* ORIGIN = "Origin";
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
366
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
367
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
368 MergeStudyJob::MergeStudyJob(ServerContext& context,
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
369 const Json::Value& serialized) :
3941
771dbd9eb3bd class CleaningInstancesJob to share cleaning code by merge/split jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3940
diff changeset
370 CleaningInstancesJob(context, serialized,
771dbd9eb3bd class CleaningInstancesJob to share cleaning code by merge/split jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3940
diff changeset
371 false /* by default, remove source instances */) // (*)
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
372 {
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Sebastien Jodogne <s.jodogne@gmail.com>
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373 if (!HasTrailingStep())
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374 {
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Sebastien Jodogne <s.jodogne@gmail.com>
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375 // Should have been set by (*)
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376 throw OrthancException(ErrorCode_InternalError);
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Sebastien Jodogne <s.jodogne@gmail.com>
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377 }
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Sebastien Jodogne <s.jodogne@gmail.com>
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378
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Sebastien Jodogne <s.jodogne@gmail.com>
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379 targetStudy_ = SerializationToolbox::ReadString(serialized, TARGET_STUDY);
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Sebastien Jodogne <s.jodogne@gmail.com>
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380 SerializationToolbox::ReadMapOfTags(replacements_, serialized, REPLACEMENTS);
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Sebastien Jodogne <s.jodogne@gmail.com>
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381 SerializationToolbox::ReadSetOfTags(removals_, serialized, REMOVALS);
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Sebastien Jodogne <s.jodogne@gmail.com>
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382 SerializationToolbox::ReadMapOfStrings(seriesUidMap_, serialized, SERIES_UID_MAP);
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Sebastien Jodogne <s.jodogne@gmail.com>
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383 origin_ = DicomInstanceOrigin(serialized[ORIGIN]);
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Sebastien Jodogne <s.jodogne@gmail.com>
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384 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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385
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Sebastien Jodogne <s.jodogne@gmail.com>
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386
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Sebastien Jodogne <s.jodogne@gmail.com>
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387 bool MergeStudyJob::Serialize(Json::Value& target)
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Sebastien Jodogne <s.jodogne@gmail.com>
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388 {
3941
771dbd9eb3bd class CleaningInstancesJob to share cleaning code by merge/split jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3940
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389 if (!CleaningInstancesJob::Serialize(target))
2853
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Sebastien Jodogne <s.jodogne@gmail.com>
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390 {
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Sebastien Jodogne <s.jodogne@gmail.com>
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391 return false;
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Sebastien Jodogne <s.jodogne@gmail.com>
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392 }
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Sebastien Jodogne <s.jodogne@gmail.com>
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393 else
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Sebastien Jodogne <s.jodogne@gmail.com>
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394 {
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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395 target[TARGET_STUDY] = targetStudy_;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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396 SerializationToolbox::WriteMapOfTags(target, replacements_, REPLACEMENTS);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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397 SerializationToolbox::WriteSetOfTags(target, removals_, REMOVALS);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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398 SerializationToolbox::WriteMapOfStrings(target, seriesUidMap_, SERIES_UID_MAP);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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399 origin_.Serialize(target[ORIGIN]);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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400
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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401 return true;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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402 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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403 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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404 }