annotate OrthancServer/OrthancRestApi.cpp @ 613:60d90e48e809 find-move-scp

query/retrieve
author Sebastien Jodogne <s.jodogne@gmail.com>
date Fri, 18 Oct 2013 17:27:26 +0200
parents d5043ff68d58
children fb49bf72ac2d
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2013 Medical Physics Department, CHU of Liege,
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4 * Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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32
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33 #include "OrthancRestApi.h"
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34
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35 #include "../Core/Compression/HierarchicalZipWriter.h"
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36 #include "../Core/HttpClient.h"
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37 #include "../Core/HttpServer/FilesystemHttpSender.h"
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38 #include "../Core/Uuid.h"
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39 #include "DicomProtocol/DicomUserConnection.h"
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40 #include "FromDcmtkBridge.h"
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41 #include "OrthancInitialization.h"
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42 #include "ServerToolbox.h"
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43
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44 #include <dcmtk/dcmdata/dcistrmb.h>
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45 #include <dcmtk/dcmdata/dcfilefo.h>
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46 #include <boost/lexical_cast.hpp>
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47 #include <glog/logging.h>
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49
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50 #define RETRIEVE_CONTEXT(call) \
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51 OrthancRestApi& contextApi = \
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52 dynamic_cast<OrthancRestApi&>(call.GetContext()); \
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53 ServerContext& context = contextApi.GetContext()
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54
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55 #define RETRIEVE_MODALITIES(call) \
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56 const OrthancRestApi::SetOfStrings& modalities = \
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57 dynamic_cast<OrthancRestApi&>(call.GetContext()).GetModalities();
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58
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59 #define RETRIEVE_PEERS(call) \
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60 const OrthancRestApi::SetOfStrings& peers = \
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61 dynamic_cast<OrthancRestApi&>(call.GetContext()).GetPeers();
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65 namespace Orthanc
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66 {
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67 // TODO IMPROVE MULTITHREADING
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68 // Every call to "ParsedDicomFile" must lock this mutex!!!
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69 static boost::mutex cacheMutex_;
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70
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71
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72 // DICOM SCU ----------------------------------------------------------------
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73
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74 static bool MergeQueryAndTemplate(DicomMap& result,
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75 const std::string& postData)
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76 {
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77 Json::Value query;
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78 Json::Reader reader;
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79
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80 if (!reader.parse(postData, query) ||
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81 query.type() != Json::objectValue)
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82 {
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83 return false;
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84 }
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85
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86 Json::Value::Members members = query.getMemberNames();
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87 for (size_t i = 0; i < members.size(); i++)
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88 {
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89 DicomTag t = FromDcmtkBridge::ParseTag(members[i]);
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90 result.SetValue(t, query[members[i]].asString());
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91 }
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92
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93 return true;
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94 }
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95
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96 static void DicomFindPatient(RestApi::PostCall& call)
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97 {
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98 DicomMap m;
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99 DicomMap::SetupFindPatientTemplate(m);
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100 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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101 {
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102 return;
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103 }
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104
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105 DicomUserConnection connection;
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106 ConnectToModalityUsingSymbolicName(connection, call.GetUriComponent("id", ""));
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107
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108 DicomFindAnswers answers;
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109 connection.FindPatient(answers, m);
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110
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111 Json::Value result;
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112 answers.ToJson(result);
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113 call.GetOutput().AnswerJson(result);
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114 }
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115
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116 static void DicomFindStudy(RestApi::PostCall& call)
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117 {
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118 DicomMap m;
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119 DicomMap::SetupFindStudyTemplate(m);
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120 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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121 {
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122 return;
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123 }
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124
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125 if (m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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126 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2)
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127 {
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128 return;
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129 }
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130
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131 DicomUserConnection connection;
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132 ConnectToModalityUsingSymbolicName(connection, call.GetUriComponent("id", ""));
227
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133
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134 DicomFindAnswers answers;
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135 connection.FindStudy(answers, m);
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136
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137 Json::Value result;
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138 answers.ToJson(result);
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139 call.GetOutput().AnswerJson(result);
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140 }
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141
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142 static void DicomFindSeries(RestApi::PostCall& call)
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143 {
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144 DicomMap m;
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145 DicomMap::SetupFindSeriesTemplate(m);
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146 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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147 {
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148 return;
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149 }
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150
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151 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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152 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) ||
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153 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2)
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154 {
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155 return;
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156 }
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157
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158 DicomUserConnection connection;
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159 ConnectToModalityUsingSymbolicName(connection, call.GetUriComponent("id", ""));
227
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160
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161 DicomFindAnswers answers;
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162 connection.FindSeries(answers, m);
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163
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164 Json::Value result;
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165 answers.ToJson(result);
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166 call.GetOutput().AnswerJson(result);
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167 }
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168
499
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169 static void DicomFindInstance(RestApi::PostCall& call)
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170 {
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171 DicomMap m;
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172 DicomMap::SetupFindInstanceTemplate(m);
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173 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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174 {
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175 return;
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176 }
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177
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178 if ((m.GetValue(DICOM_TAG_ACCESSION_NUMBER).AsString().size() <= 2 &&
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179 m.GetValue(DICOM_TAG_PATIENT_ID).AsString().size() <= 2) ||
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180 m.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).AsString().size() <= 2 ||
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181 m.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).AsString().size() <= 2)
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182 {
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183 return;
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184 }
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185
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186 DicomUserConnection connection;
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187 ConnectToModalityUsingSymbolicName(connection, call.GetUriComponent("id", ""));
499
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188
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189 DicomFindAnswers answers;
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190 connection.FindInstance(answers, m);
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191
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192 Json::Value result;
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193 answers.ToJson(result);
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194 call.GetOutput().AnswerJson(result);
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195 }
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196
227
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197 static void DicomFind(RestApi::PostCall& call)
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198 {
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199 DicomMap m;
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200 DicomMap::SetupFindPatientTemplate(m);
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201 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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202 {
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203 return;
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204 }
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205
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206 DicomUserConnection connection;
613
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207 ConnectToModalityUsingSymbolicName(connection, call.GetUriComponent("id", ""));
227
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208
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209 DicomFindAnswers patients;
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210 connection.FindPatient(patients, m);
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211
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212 // Loop over the found patients
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213 Json::Value result = Json::arrayValue;
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214 for (size_t i = 0; i < patients.GetSize(); i++)
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215 {
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216 Json::Value patient(Json::objectValue);
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217 FromDcmtkBridge::ToJson(patient, patients.GetAnswer(i));
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diff changeset
218
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219 DicomMap::SetupFindStudyTemplate(m);
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diff changeset
220 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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diff changeset
221 {
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222 return;
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223 }
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224 m.CopyTagIfExists(patients.GetAnswer(i), DICOM_TAG_PATIENT_ID);
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diff changeset
225
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diff changeset
226 DicomFindAnswers studies;
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diff changeset
227 connection.FindStudy(studies, m);
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diff changeset
228
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diff changeset
229 patient["Studies"] = Json::arrayValue;
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230
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231 // Loop over the found studies
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232 for (size_t j = 0; j < studies.GetSize(); j++)
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diff changeset
233 {
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234 Json::Value study(Json::objectValue);
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diff changeset
235 FromDcmtkBridge::ToJson(study, studies.GetAnswer(j));
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diff changeset
236
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diff changeset
237 DicomMap::SetupFindSeriesTemplate(m);
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diff changeset
238 if (!MergeQueryAndTemplate(m, call.GetPostBody()))
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diff changeset
239 {
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diff changeset
240 return;
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241 }
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diff changeset
242 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_PATIENT_ID);
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diff changeset
243 m.CopyTagIfExists(studies.GetAnswer(j), DICOM_TAG_STUDY_INSTANCE_UID);
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diff changeset
244
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diff changeset
245 DicomFindAnswers series;
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diff changeset
246 connection.FindSeries(series, m);
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diff changeset
247
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248 // Loop over the found series
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249 study["Series"] = Json::arrayValue;
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diff changeset
250 for (size_t k = 0; k < series.GetSize(); k++)
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diff changeset
251 {
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diff changeset
252 Json::Value series2(Json::objectValue);
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diff changeset
253 FromDcmtkBridge::ToJson(series2, series.GetAnswer(k));
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diff changeset
254 study["Series"].append(series2);
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diff changeset
255 }
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diff changeset
256
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diff changeset
257 patient["Studies"].append(study);
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diff changeset
258 }
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diff changeset
259
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diff changeset
260 result.append(patient);
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diff changeset
261 }
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diff changeset
262
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diff changeset
263 call.GetOutput().AnswerJson(result);
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diff changeset
264 }
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diff changeset
265
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diff changeset
266
485
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diff changeset
267 static bool GetInstancesToExport(std::list<std::string>& instances,
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diff changeset
268 const std::string& remote,
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diff changeset
269 RestApi::PostCall& call)
227
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diff changeset
270 {
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diff changeset
271 RETRIEVE_CONTEXT(call);
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diff changeset
272
402
d2c69150a979 bulk storescu
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diff changeset
273 std::string stripped = Toolbox::StripSpaces(call.GetPostBody());
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diff changeset
274
d2c69150a979 bulk storescu
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diff changeset
275 Json::Value request;
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diff changeset
276 if (Toolbox::IsSHA1(stripped))
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parents: 399
diff changeset
277 {
d2c69150a979 bulk storescu
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diff changeset
278 // This is for compatibility with Orthanc <= 0.5.1.
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diff changeset
279 request = stripped;
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diff changeset
280 }
d2c69150a979 bulk storescu
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parents: 399
diff changeset
281 else if (!call.ParseJsonRequest(request))
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
282 {
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
283 // Bad JSON request
485
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
284 return false;
402
d2c69150a979 bulk storescu
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parents: 399
diff changeset
285 }
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
286
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diff changeset
287 if (request.isString())
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parents: 399
diff changeset
288 {
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diff changeset
289 context.GetIndex().LogExportedResource(request.asString(), remote);
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parents: 399
diff changeset
290 context.GetIndex().GetChildInstances(instances, request.asString());
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diff changeset
291 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
292 else if (request.isArray())
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parents: 399
diff changeset
293 {
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diff changeset
294 for (Json::Value::ArrayIndex i = 0; i < request.size(); i++)
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diff changeset
295 {
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diff changeset
296 if (!request[i].isString())
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parents: 399
diff changeset
297 {
485
bdbde1fbfab3 send resources through HTTP
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diff changeset
298 return false;
402
d2c69150a979 bulk storescu
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parents: 399
diff changeset
299 }
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
300
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
301 std::string stripped = Toolbox::StripSpaces(request[i].asString());
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parents: 399
diff changeset
302 if (!Toolbox::IsSHA1(stripped))
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
303 {
485
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
304 return false;
402
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
305 }
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
306
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
307 context.GetIndex().LogExportedResource(stripped, remote);
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
308
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
309 std::list<std::string> tmp;
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
310 context.GetIndex().GetChildInstances(tmp, stripped);
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
311 instances.merge(tmp);
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
312 assert(tmp.size() == 0);
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
313 }
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
314 }
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
315 else
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
316 {
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
317 // Neither a string, nor a list of strings. Bad request.
485
bdbde1fbfab3 send resources through HTTP
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parents: 484
diff changeset
318 return false;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
319 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
320
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
321 return true;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
322 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
323
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
324
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
325 static void DicomStore(RestApi::PostCall& call)
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
326 {
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
327 RETRIEVE_CONTEXT(call);
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
328
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
329 std::string remote = call.GetUriComponent("id", "");
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
330
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
331 std::list<std::string> instances;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
332 if (!GetInstancesToExport(instances, remote, call))
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
333 {
402
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
334 return;
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
335 }
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
336
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
337 DicomUserConnection connection;
613
60d90e48e809 query/retrieve
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 602
diff changeset
338 ConnectToModalityUsingSymbolicName(connection, remote);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
339
402
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
340 for (std::list<std::string>::const_iterator
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
341 it = instances.begin(); it != instances.end(); it++)
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
342 {
485
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
343 LOG(INFO) << "Sending resource " << *it << " to modality \"" << remote << "\"";
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
344
402
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
345 std::string dicom;
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
346 context.ReadFile(dicom, *it, FileContentType_Dicom);
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
347 connection.Store(dicom);
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
348 }
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
349
402
d2c69150a979 bulk storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
350 call.GetOutput().AnswerBuffer("{}", "application/json");
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
351 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
352
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
353
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
354
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
355 // System information -------------------------------------------------------
211
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
356
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
357 static void ServeRoot(RestApi::GetCall& call)
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
358 {
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
359 call.GetOutput().Redirect("app/explorer.html");
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
360 }
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
361
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
362 static void GetSystemInformation(RestApi::GetCall& call)
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
363 {
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
364 Json::Value result = Json::objectValue;
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
365
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
366 result["Version"] = ORTHANC_VERSION;
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
367 result["Name"] = GetGlobalStringParameter("Name", "");
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
368
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
369 call.GetOutput().AnswerJson(result);
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
370 }
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
371
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
372 static void GetStatistics(RestApi::GetCall& call)
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
373 {
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
374 RETRIEVE_CONTEXT(call);
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
375 Json::Value result = Json::objectValue;
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
376 context.GetIndex().ComputeStatistics(result);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
377 call.GetOutput().AnswerJson(result);
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
378 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
379
342
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
380 static void GenerateUid(RestApi::GetCall& call)
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
381 {
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
382 std::string level = call.GetArgument("level", "");
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
383 if (level == "patient")
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
384 {
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
385 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Patient), "text/plain");
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
386 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
387 else if (level == "study")
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
388 {
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
389 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Study), "text/plain");
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
390 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
391 else if (level == "series")
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
392 {
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
393 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Series), "text/plain");
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
394 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
395 else if (level == "instance")
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
396 {
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
397 call.GetOutput().AnswerBuffer(FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Instance), "text/plain");
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
398 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
399 }
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
400
418
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
401 static void ExecuteScript(RestApi::PostCall& call)
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
402 {
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
403 std::string result;
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
404 RETRIEVE_CONTEXT(call);
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
405 context.GetLuaContext().Execute(result, call.GetPostBody());
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
406 call.GetOutput().AnswerBuffer(result, "text/plain");
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
407 }
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
408
446
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
409 static void GetNowIsoString(RestApi::GetCall& call)
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
410 {
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
411 call.GetOutput().AnswerBuffer(Toolbox::GetNowIsoString(), "text/plain");
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
412 }
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
413
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
414
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
415
418
b79bf2f4ab2e execution of lua through REST
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parents: 413
diff changeset
416
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
417
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
418
211
b7aea293b965 list of resources
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diff changeset
419 // List all the patients, studies, series or instances ----------------------
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diff changeset
420
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diff changeset
421 template <enum ResourceType resourceType>
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422 static void ListResources(RestApi::GetCall& call)
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diff changeset
423 {
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diff changeset
424 RETRIEVE_CONTEXT(call);
b7aea293b965 list of resources
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diff changeset
425
b7aea293b965 list of resources
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diff changeset
426 Json::Value result;
b7aea293b965 list of resources
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diff changeset
427 context.GetIndex().GetAllUuids(result, resourceType);
b7aea293b965 list of resources
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parents: 210
diff changeset
428 call.GetOutput().AnswerJson(result);
b7aea293b965 list of resources
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parents: 210
diff changeset
429 }
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
430
212
f276b175dcaf delete resources
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diff changeset
431 template <enum ResourceType resourceType>
f276b175dcaf delete resources
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diff changeset
432 static void GetSingleResource(RestApi::GetCall& call)
f276b175dcaf delete resources
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diff changeset
433 {
f276b175dcaf delete resources
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diff changeset
434 RETRIEVE_CONTEXT(call);
f276b175dcaf delete resources
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diff changeset
435
f276b175dcaf delete resources
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diff changeset
436 Json::Value result;
f276b175dcaf delete resources
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diff changeset
437 if (context.GetIndex().LookupResource(result, call.GetUriComponent("id", ""), resourceType))
f276b175dcaf delete resources
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parents: 211
diff changeset
438 {
f276b175dcaf delete resources
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diff changeset
439 call.GetOutput().AnswerJson(result);
f276b175dcaf delete resources
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parents: 211
diff changeset
440 }
f276b175dcaf delete resources
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parents: 211
diff changeset
441 }
f276b175dcaf delete resources
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diff changeset
442
f276b175dcaf delete resources
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diff changeset
443 template <enum ResourceType resourceType>
f276b175dcaf delete resources
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444 static void DeleteSingleResource(RestApi::DeleteCall& call)
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445 {
f276b175dcaf delete resources
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diff changeset
446 RETRIEVE_CONTEXT(call);
f276b175dcaf delete resources
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diff changeset
447
f276b175dcaf delete resources
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diff changeset
448 Json::Value result;
f276b175dcaf delete resources
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diff changeset
449 if (context.GetIndex().DeleteResource(result, call.GetUriComponent("id", ""), resourceType))
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
450 {
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
451 call.GetOutput().AnswerJson(result);
f276b175dcaf delete resources
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parents: 211
diff changeset
452 }
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
453 }
f276b175dcaf delete resources
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parents: 211
diff changeset
454
211
b7aea293b965 list of resources
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diff changeset
455
248
2442033911d6 creation of zip files
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diff changeset
456 // Download of ZIP files ----------------------------------------------------
2442033911d6 creation of zip files
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diff changeset
457
250
f23318b11b39 creation of zip files
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diff changeset
458
f23318b11b39 creation of zip files
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diff changeset
459 static std::string GetDirectoryNameInArchive(const Json::Value& resource,
f23318b11b39 creation of zip files
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diff changeset
460 ResourceType resourceType)
f23318b11b39 creation of zip files
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diff changeset
461 {
f23318b11b39 creation of zip files
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diff changeset
462 switch (resourceType)
f23318b11b39 creation of zip files
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diff changeset
463 {
f23318b11b39 creation of zip files
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diff changeset
464 case ResourceType_Patient:
f23318b11b39 creation of zip files
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diff changeset
465 {
f23318b11b39 creation of zip files
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diff changeset
466 std::string p = resource["MainDicomTags"]["PatientID"].asString();
f23318b11b39 creation of zip files
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diff changeset
467 std::string n = resource["MainDicomTags"]["PatientName"].asString();
f23318b11b39 creation of zip files
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diff changeset
468 return p + " " + n;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
469 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
470
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
471 case ResourceType_Study:
253
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
472 {
250
f23318b11b39 creation of zip files
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diff changeset
473 return resource["MainDicomTags"]["StudyDescription"].asString();
253
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
474 }
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
475
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
476 case ResourceType_Series:
253
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
477 {
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
478 std::string d = resource["MainDicomTags"]["SeriesDescription"].asString();
15fcd925b05b improvement
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parents: 250
diff changeset
479 std::string m = resource["MainDicomTags"]["Modality"].asString();
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
480 return m + " " + d;
15fcd925b05b improvement
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 250
diff changeset
481 }
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
482
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
483 default:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
484 throw OrthancException(ErrorCode_InternalError);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
485 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
486 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
487
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
488 static bool CreateRootDirectoryInArchive(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
489 ServerContext& context,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
490 const Json::Value& resource,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
491 ResourceType resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
492 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
493 if (resourceType == ResourceType_Patient)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
494 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
495 return true;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
496 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
497
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
498 ResourceType parentType = GetParentResourceType(resourceType);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
499 Json::Value parent;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
500
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
501 switch (resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
502 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
503 case ResourceType_Study:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
504 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
505 if (!context.GetIndex().LookupResource(parent, resource["ParentPatient"].asString(), parentType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
506 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
507 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
508 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
509
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
510 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
511 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
512
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
513 case ResourceType_Series:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
514 if (!context.GetIndex().LookupResource(parent, resource["ParentStudy"].asString(), parentType) ||
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
515 !CreateRootDirectoryInArchive(writer, context, parent, parentType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
516 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
517 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
518 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
519 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
520
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
521 default:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
522 throw OrthancException(ErrorCode_NotImplemented);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
523 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
524
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
525 writer.OpenDirectory(GetDirectoryNameInArchive(parent, parentType).c_str());
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
526 return true;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
527 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
528
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
529 static bool ArchiveInstance(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
530 ServerContext& context,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
531 const std::string& instancePublicId)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
532 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
533 Json::Value instance;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
534 if (!context.GetIndex().LookupResource(instance, instancePublicId, ResourceType_Instance))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
535 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
536 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
537 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
538
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
539 std::string filename = instance["MainDicomTags"]["SOPInstanceUID"].asString() + ".dcm";
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
540 writer.OpenFile(filename.c_str());
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
541
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
542 std::string dicom;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
543 context.ReadFile(dicom, instancePublicId, FileContentType_Dicom);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
544 writer.Write(dicom);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
545
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
546 return true;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
547 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
548
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
549 static bool ArchiveInternal(HierarchicalZipWriter& writer,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
550 ServerContext& context,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
551 const std::string& publicId,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
552 ResourceType resourceType,
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
553 bool isFirstLevel)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
554 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
555 Json::Value resource;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
556 if (!context.GetIndex().LookupResource(resource, publicId, resourceType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
557 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
558 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
559 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
560
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
561 if (isFirstLevel &&
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
562 !CreateRootDirectoryInArchive(writer, context, resource, resourceType))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
563 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
564 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
565 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
566
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
567 writer.OpenDirectory(GetDirectoryNameInArchive(resource, resourceType).c_str());
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
568
f23318b11b39 creation of zip files
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parents: 249
diff changeset
569 switch (resourceType)
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
570 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
571 case ResourceType_Patient:
299
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
572 for (Json::Value::ArrayIndex i = 0; i < resource["Studies"].size(); i++)
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
573 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
574 std::string studyId = resource["Studies"][i].asString();
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
575 if (!ArchiveInternal(writer, context, studyId, ResourceType_Study, false))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
576 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
577 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
578 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
579 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
580 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
581
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
582 case ResourceType_Study:
299
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
583 for (Json::Value::ArrayIndex i = 0; i < resource["Series"].size(); i++)
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
584 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
585 std::string seriesId = resource["Series"][i].asString();
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
586 if (!ArchiveInternal(writer, context, seriesId, ResourceType_Series, false))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
587 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
588 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
589 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
590 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
591 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
592
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
593 case ResourceType_Series:
299
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
594 for (Json::Value::ArrayIndex i = 0; i < resource["Instances"].size(); i++)
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
595 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
596 if (!ArchiveInstance(writer, context, resource["Instances"][i].asString()))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
597 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
598 return false;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
599 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
600 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
601 break;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
602
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
603 default:
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
604 throw OrthancException(ErrorCode_InternalError);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
605 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
606
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
607 writer.CloseDirectory();
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
608 return true;
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
609 }
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
610
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
611 template <enum ResourceType resourceType>
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
612 static void GetArchive(RestApi::GetCall& call)
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
613 {
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
614 RETRIEVE_CONTEXT(call);
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
615
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
616 // Create a RAII for the temporary file to manage the ZIP file
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
617 Toolbox::TemporaryFile tmp;
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
618 std::string id = call.GetUriComponent("id", "");
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
619
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
620 {
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
621 // Create a ZIP writer
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
622 HierarchicalZipWriter writer(tmp.GetPath().c_str());
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
623
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
624 // Store the requested resource into the ZIP
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
625 if (!ArchiveInternal(writer, context, id, resourceType, true))
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
626 {
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
627 return;
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
628 }
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
629 }
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
630
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
631 // Prepare the sending of the ZIP file
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
632 FilesystemHttpSender sender(tmp.GetPath().c_str());
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
633 sender.SetContentType("application/zip");
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
634 sender.SetDownloadFilename(id + ".zip");
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
635
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
636 // Send the ZIP
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
637 call.GetOutput().AnswerFile(sender);
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
638
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
639 // The temporary file is automatically removed thanks to the RAII
248
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
640 }
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
641
2442033911d6 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 238
diff changeset
642
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
643 // Changes API --------------------------------------------------------------
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
644
231
8098448bd827 export log
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parents: 230
diff changeset
645 static void GetSinceAndLimit(int64_t& since,
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
646 unsigned int& limit,
237
16a4ac70bd8a last change and export
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parents: 233
diff changeset
647 bool& last,
231
8098448bd827 export log
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parents: 230
diff changeset
648 const RestApi::GetCall& call)
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
649 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
650 static const unsigned int MAX_RESULTS = 100;
237
16a4ac70bd8a last change and export
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parents: 233
diff changeset
651
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
652 if (call.HasArgument("last"))
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
653 {
16a4ac70bd8a last change and export
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parents: 233
diff changeset
654 last = true;
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
655 return;
16a4ac70bd8a last change and export
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parents: 233
diff changeset
656 }
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
657
16a4ac70bd8a last change and export
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parents: 233
diff changeset
658 last = false;
16a4ac70bd8a last change and export
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parents: 233
diff changeset
659
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
660 try
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
661 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
662 since = boost::lexical_cast<int64_t>(call.GetArgument("since", "0"));
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
663 limit = boost::lexical_cast<unsigned int>(call.GetArgument("limit", "0"));
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
664 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
665 catch (boost::bad_lexical_cast)
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
666 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
667 return;
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
668 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
669
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
670 if (limit == 0 || limit > MAX_RESULTS)
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
671 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
672 limit = MAX_RESULTS;
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
673 }
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
674 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
675
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
676 static void GetChanges(RestApi::GetCall& call)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
677 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
678 RETRIEVE_CONTEXT(call);
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
679
8098448bd827 export log
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parents: 230
diff changeset
680 //std::string filter = GetArgument(getArguments, "filter", "");
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
681 int64_t since;
8098448bd827 export log
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parents: 230
diff changeset
682 unsigned int limit;
237
16a4ac70bd8a last change and export
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parents: 233
diff changeset
683 bool last;
16a4ac70bd8a last change and export
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parents: 233
diff changeset
684 GetSinceAndLimit(since, limit, last, call);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
685
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
686 Json::Value result;
237
16a4ac70bd8a last change and export
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parents: 233
diff changeset
687 if ((!last && context.GetIndex().GetChanges(result, since, limit)) ||
16a4ac70bd8a last change and export
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parents: 233
diff changeset
688 ( last && context.GetIndex().GetLastChange(result)))
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
689 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
690 call.GetOutput().AnswerJson(result);
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
691 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
692 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
693
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
694
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
695 static void DeleteChanges(RestApi::DeleteCall& call)
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
696 {
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
697 RETRIEVE_CONTEXT(call);
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
698 context.GetIndex().DeleteChanges();
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
699 call.GetOutput().AnswerBuffer("", "text/plain");
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
700 }
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
701
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
702
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
703 static void GetExports(RestApi::GetCall& call)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
704 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
705 RETRIEVE_CONTEXT(call);
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
706
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
707 int64_t since;
8098448bd827 export log
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parents: 230
diff changeset
708 unsigned int limit;
237
16a4ac70bd8a last change and export
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parents: 233
diff changeset
709 bool last;
16a4ac70bd8a last change and export
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parents: 233
diff changeset
710 GetSinceAndLimit(since, limit, last, call);
231
8098448bd827 export log
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parents: 230
diff changeset
711
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
712 Json::Value result;
237
16a4ac70bd8a last change and export
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parents: 233
diff changeset
713 if ((!last && context.GetIndex().GetExportedResources(result, since, limit)) ||
16a4ac70bd8a last change and export
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parents: 233
diff changeset
714 ( last && context.GetIndex().GetLastExportedResource(result)))
231
8098448bd827 export log
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parents: 230
diff changeset
715 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
716 call.GetOutput().AnswerJson(result);
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
717 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
718 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 230
diff changeset
719
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
720
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
721 static void DeleteExports(RestApi::DeleteCall& call)
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
722 {
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
723 RETRIEVE_CONTEXT(call);
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
724 context.GetIndex().DeleteExportedResources();
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
725 call.GetOutput().AnswerBuffer("", "text/plain");
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
726 }
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
727
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
728
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
729 // Get information about a single patient -----------------------------------
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
730
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
731 static void IsProtectedPatient(RestApi::GetCall& call)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
732 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
733 RETRIEVE_CONTEXT(call);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
734 std::string publicId = call.GetUriComponent("id", "");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
735 bool isProtected = context.GetIndex().IsProtectedPatient(publicId);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
736 call.GetOutput().AnswerBuffer(isProtected ? "1" : "0", "text/plain");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
737 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
738
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
739
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
740 static void SetPatientProtection(RestApi::PutCall& call)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
741 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
742 RETRIEVE_CONTEXT(call);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
743 std::string publicId = call.GetUriComponent("id", "");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
744 std::string s = Toolbox::StripSpaces(call.GetPutBody());
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
745
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
746 if (s == "0")
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
747 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
748 context.GetIndex().SetProtectedPatient(publicId, false);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
749 call.GetOutput().AnswerBuffer("", "text/plain");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
750 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
751 else if (s == "1")
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
752 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
753 context.GetIndex().SetProtectedPatient(publicId, true);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
754 call.GetOutput().AnswerBuffer("", "text/plain");
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
755 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
756 else
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
757 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
758 // Bad request
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
759 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
760 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
761
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
762
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
763 // Get information about a single instance ----------------------------------
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
764
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
765 static void GetInstanceFile(RestApi::GetCall& call)
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
766 {
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
767 RETRIEVE_CONTEXT(call);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
768
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
769 std::string publicId = call.GetUriComponent("id", "");
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
770 context.AnswerFile(call.GetOutput(), publicId, FileContentType_Dicom);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
771 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
772
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
773
483
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
774 static void ExportInstanceFile(RestApi::PostCall& call)
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
775 {
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
776 RETRIEVE_CONTEXT(call);
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
777
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
778 std::string publicId = call.GetUriComponent("id", "");
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
779
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
780 std::string dicom;
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
781 context.ReadFile(dicom, publicId, FileContentType_Dicom);
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
782
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
783 Toolbox::WriteFile(dicom, call.GetPostBody());
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
784
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
785 call.GetOutput().AnswerBuffer("{}", "application/json");
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
786 }
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
787
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
788
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
789 template <bool simplify>
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
790 static void GetInstanceTags(RestApi::GetCall& call)
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
791 {
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
792 RETRIEVE_CONTEXT(call);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
793
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
794 std::string publicId = call.GetUriComponent("id", "");
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
795
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
796 Json::Value full;
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
797 context.ReadJson(full, publicId);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
798
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
799 if (simplify)
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
800 {
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
801 Json::Value simplified;
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
802 SimplifyTags(simplified, full);
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
803 call.GetOutput().AnswerJson(simplified);
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
804 }
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
805 else
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
806 {
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 225
diff changeset
807 call.GetOutput().AnswerJson(full);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
808 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
809 }
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
810
214
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
811
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
812 static void ListFrames(RestApi::GetCall& call)
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
813 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
814 RETRIEVE_CONTEXT(call);
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
815
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
816 Json::Value instance;
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
817 if (context.GetIndex().LookupResource(instance, call.GetUriComponent("id", ""), ResourceType_Instance))
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
818 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
819 unsigned int numberOfFrames = 1;
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
820
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
821 try
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
822 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
823 Json::Value tmp = instance["MainDicomTags"]["NumberOfFrames"];
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
824 numberOfFrames = boost::lexical_cast<unsigned int>(tmp.asString());
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
825 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
826 catch (...)
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
827 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
828 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
829
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
830 Json::Value result = Json::arrayValue;
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
831 for (unsigned int i = 0; i < numberOfFrames; i++)
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
832 {
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
833 result.append(i);
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
834 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
835
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
836 call.GetOutput().AnswerJson(result);
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
837 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
838 }
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
839
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
840
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
841 template <enum ImageExtractionMode mode>
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
842 static void GetImage(RestApi::GetCall& call)
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
843 {
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
844 RETRIEVE_CONTEXT(call);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
845
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
846 std::string frameId = call.GetUriComponent("frame", "0");
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
847
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
848 unsigned int frame;
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
849 try
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
850 {
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
851 frame = boost::lexical_cast<unsigned int>(frameId);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
852 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
853 catch (boost::bad_lexical_cast)
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
854 {
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
855 return;
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
856 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
857
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
858 std::string publicId = call.GetUriComponent("id", "");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
859 std::string dicomContent, png;
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
860 context.ReadFile(dicomContent, publicId, FileContentType_Dicom);
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
861
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
862 try
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
863 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
864 FromDcmtkBridge::ExtractPngImage(png, dicomContent, frame, mode);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
865 call.GetOutput().AnswerBuffer(png, "image/png");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
866 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
867 catch (OrthancException& e)
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
868 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
869 if (e.GetErrorCode() == ErrorCode_ParameterOutOfRange)
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
870 {
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
871 // The frame number is out of the range for this DICOM
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
872 // instance, the resource is not existent
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
873 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
874 else
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
875 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
876 std::string root = "";
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
877 for (size_t i = 1; i < call.GetFullUri().size(); i++)
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
878 {
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
879 root += "../";
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
880 }
218
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 217
diff changeset
881
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
882 call.GetOutput().Redirect(root + "app/images/unsupported.png");
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
883 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
884 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
885 }
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
886
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
887
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
888 // Upload of DICOM files through HTTP ---------------------------------------
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
889
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
890 static void UploadDicomFile(RestApi::PostCall& call)
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
891 {
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
892 RETRIEVE_CONTEXT(call);
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
893
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
894 const std::string& postData = call.GetPostBody();
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
895 if (postData.size() == 0)
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
896 {
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
897 return;
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 285
diff changeset
898 }
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
899
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
900 LOG(INFO) << "Receiving a DICOM file of " << postData.size() << " bytes through HTTP";
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
901
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
902 std::string publicId;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
903 StoreStatus status = context.Store(publicId, postData);
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
904 Json::Value result = Json::objectValue;
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
905
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
906 if (status != StoreStatus_Failure)
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
907 {
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
908 result["ID"] = publicId;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
909 result["Path"] = GetBasePath(ResourceType_Instance, publicId);
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
910 }
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
911
434
ccf3a0a43dac EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 418
diff changeset
912 result["Status"] = EnumerationToString(status);
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
913 call.GetOutput().AnswerJson(result);
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
914 }
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
915
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
916
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
917
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
918 // DICOM bridge -------------------------------------------------------------
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
919
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
920 static bool IsExistingModality(const OrthancRestApi::SetOfStrings& modalities,
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
921 const std::string& id)
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
922 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
923 return modalities.find(id) != modalities.end();
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
924 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
925
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
926 static void ListModalities(RestApi::GetCall& call)
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
927 {
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
928 RETRIEVE_MODALITIES(call);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
929
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
930 Json::Value result = Json::arrayValue;
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
931 for (OrthancRestApi::SetOfStrings::const_iterator
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
932 it = modalities.begin(); it != modalities.end(); it++)
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
933 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
934 result.append(*it);
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
935 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
936
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
937 call.GetOutput().AnswerJson(result);
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
938 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
939
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
940
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
941 static void ListModalityOperations(RestApi::GetCall& call)
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
942 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
943 RETRIEVE_MODALITIES(call);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
944
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
945 std::string id = call.GetUriComponent("id", "");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
946 if (IsExistingModality(modalities, id))
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
947 {
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
948 Json::Value result = Json::arrayValue;
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
949 result.append("find-patient");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
950 result.append("find-study");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
951 result.append("find-series");
499
7db04aa5104f instance-level find scu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 485
diff changeset
952 result.append("find-instance");
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
953 result.append("find");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
954 result.append("store");
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
955 call.GetOutput().AnswerJson(result);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
956 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
957 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
958
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
959
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
960
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
961 // Raw access to the DICOM tags of an instance ------------------------------
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
962
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
963 static void GetRawContent(RestApi::GetCall& call)
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
964 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 314
diff changeset
965 boost::mutex::scoped_lock lock(cacheMutex_);
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
966
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
967 RETRIEVE_CONTEXT(call);
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
968 std::string id = call.GetUriComponent("id", "");
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
969 ParsedDicomFile& dicom = context.GetDicomFile(id);
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
970 dicom.SendPathValue(call.GetOutput(), call.GetTrailingUri());
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
971 }
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
972
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
973
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
974
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
975 // Modification of DICOM instances ------------------------------------------
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
976
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
977 namespace
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
978 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
979 typedef std::set<DicomTag> Removals;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
980 typedef std::map<DicomTag, std::string> Replacements;
350
8031f9cfe7fe removal of old code
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 349
diff changeset
981 typedef std::map< std::pair<DicomRootLevel, std::string>, std::string> UidMap;
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
982 }
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
983
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
984 static void ReplaceInstanceInternal(ParsedDicomFile& toModify,
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
985 const Removals& removals,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
986 const Replacements& replacements,
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
987 DicomReplaceMode mode,
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
988 bool removePrivateTags)
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
989 {
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
990 if (removePrivateTags)
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
991 {
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
992 toModify.RemovePrivateTags();
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
993 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
994
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
995 for (Removals::const_iterator it = removals.begin();
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
996 it != removals.end(); it++)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
997 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
998 toModify.Remove(*it);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
999 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1000
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1001 for (Replacements::const_iterator it = replacements.begin();
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1002 it != replacements.end(); it++)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1003 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1004 toModify.Replace(it->first, it->second, mode);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1005 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1006
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1007 // A new SOP instance UID is automatically generated
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1008 std::string instanceUid = FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Instance);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1009 toModify.Replace(DICOM_TAG_SOP_INSTANCE_UID, instanceUid, DicomReplaceMode_InsertIfAbsent);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1010 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1011
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1012
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1013 static void ParseRemovals(Removals& target,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1014 const Json::Value& removals)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1015 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1016 if (!removals.isArray())
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1017 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1018 throw OrthancException(ErrorCode_BadRequest);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1019 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1020
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1021 for (Json::Value::ArrayIndex i = 0; i < removals.size(); i++)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1022 {
357
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1023 std::string name = removals[i].asString();
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1024 DicomTag tag = FromDcmtkBridge::ParseTag(name);
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1025 target.insert(tag);
357
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1026
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1027 VLOG(1) << "Removal: " << name << " " << tag << std::endl;
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1028 }
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1029 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1030
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1031
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1032 static void ParseReplacements(Replacements& target,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1033 const Json::Value& replacements)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1034 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1035 if (!replacements.isObject())
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1036 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1037 throw OrthancException(ErrorCode_BadRequest);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1038 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1039
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1040 Json::Value::Members members = replacements.getMemberNames();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1041 for (size_t i = 0; i < members.size(); i++)
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1042 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1043 const std::string& name = members[i];
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1044 std::string value = replacements[name].asString();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1045
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1046 DicomTag tag = FromDcmtkBridge::ParseTag(name);
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1047 target[tag] = value;
357
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1048
8d3a0db39967 fix of standalone builds
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 351
diff changeset
1049 VLOG(1) << "Replacement: " << name << " " << tag << " == " << value << std::endl;
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1050 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1051 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1052
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1053
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1054 static std::string GeneratePatientName(ServerContext& context)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1055 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1056 uint64_t seq = context.GetIndex().IncrementGlobalSequence(GlobalProperty_AnonymizationSequence);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1057 return "Anonymized" + boost::lexical_cast<std::string>(seq);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1058 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1059
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1060
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1061 static void SetupAnonymization(Removals& removals,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1062 Replacements& replacements)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1063 {
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1064 // This is Table E.1-1 from PS 3.15-2008 - DICOM Part 15: Security and System Management Profiles
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1065 removals.insert(DicomTag(0x0008, 0x0014)); // Instance Creator UID
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1066 //removals.insert(DicomTag(0x0008, 0x0018)); // SOP Instance UID => set by ReplaceInstanceInternal()
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1067 removals.insert(DicomTag(0x0008, 0x0050)); // Accession Number
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1068 removals.insert(DicomTag(0x0008, 0x0080)); // Institution Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1069 removals.insert(DicomTag(0x0008, 0x0081)); // Institution Address
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1070 removals.insert(DicomTag(0x0008, 0x0090)); // Referring Physician's Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1071 removals.insert(DicomTag(0x0008, 0x0092)); // Referring Physician's Address
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1072 removals.insert(DicomTag(0x0008, 0x0094)); // Referring Physician's Telephone Numbers
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1073 removals.insert(DicomTag(0x0008, 0x1010)); // Station Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1074 removals.insert(DicomTag(0x0008, 0x1030)); // Study Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1075 removals.insert(DicomTag(0x0008, 0x103e)); // Series Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1076 removals.insert(DicomTag(0x0008, 0x1040)); // Institutional Department Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1077 removals.insert(DicomTag(0x0008, 0x1048)); // Physician(s) of Record
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1078 removals.insert(DicomTag(0x0008, 0x1050)); // Performing Physicians' Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1079 removals.insert(DicomTag(0x0008, 0x1060)); // Name of Physician(s) Reading Study
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1080 removals.insert(DicomTag(0x0008, 0x1070)); // Operators' Name
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1081 removals.insert(DicomTag(0x0008, 0x1080)); // Admitting Diagnoses Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1082 removals.insert(DicomTag(0x0008, 0x1155)); // Referenced SOP Instance UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1083 removals.insert(DicomTag(0x0008, 0x2111)); // Derivation Description
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1084 removals.insert(DicomTag(0x0010, 0x0010)); // Patient's Name
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1085 //removals.insert(DicomTag(0x0010, 0x0020)); // Patient ID => cf. below (*)
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1086 removals.insert(DicomTag(0x0010, 0x0030)); // Patient's Birth Date
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1087 removals.insert(DicomTag(0x0010, 0x0032)); // Patient's Birth Time
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1088 removals.insert(DicomTag(0x0010, 0x0040)); // Patient's Sex
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1089 removals.insert(DicomTag(0x0010, 0x1000)); // Other Patient Ids
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1090 removals.insert(DicomTag(0x0010, 0x1001)); // Other Patient Names
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1091 removals.insert(DicomTag(0x0010, 0x1010)); // Patient's Age
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1092 removals.insert(DicomTag(0x0010, 0x1020)); // Patient's Size
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1093 removals.insert(DicomTag(0x0010, 0x1030)); // Patient's Weight
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1094 removals.insert(DicomTag(0x0010, 0x1090)); // Medical Record Locator
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1095 removals.insert(DicomTag(0x0010, 0x2160)); // Ethnic Group
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1096 removals.insert(DicomTag(0x0010, 0x2180)); // Occupation
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1097 removals.insert(DicomTag(0x0010, 0x21b0)); // Additional Patient's History
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1098 removals.insert(DicomTag(0x0010, 0x4000)); // Patient Comments
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1099 removals.insert(DicomTag(0x0018, 0x1000)); // Device Serial Number
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1100 removals.insert(DicomTag(0x0018, 0x1030)); // Protocol Name
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1101 //removals.insert(DicomTag(0x0020, 0x000d)); // Study Instance UID => cf. below (*)
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1102 //removals.insert(DicomTag(0x0020, 0x000e)); // Series Instance UID => cf. below (*)
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1103 removals.insert(DicomTag(0x0020, 0x0010)); // Study ID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1104 removals.insert(DicomTag(0x0020, 0x0052)); // Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1105 removals.insert(DicomTag(0x0020, 0x0200)); // Synchronization Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1106 removals.insert(DicomTag(0x0020, 0x4000)); // Image Comments
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1107 removals.insert(DicomTag(0x0040, 0x0275)); // Request Attributes Sequence
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1108 removals.insert(DicomTag(0x0040, 0xa124)); // UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1109 removals.insert(DicomTag(0x0040, 0xa730)); // Content Sequence
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1110 removals.insert(DicomTag(0x0088, 0x0140)); // Storage Media File-set UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1111 removals.insert(DicomTag(0x3006, 0x0024)); // Referenced Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1112 removals.insert(DicomTag(0x3006, 0x00c2)); // Related Frame of Reference UID
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1113
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1114 /**
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1115 * (*) Patient ID, Study Instance UID and Series Instance UID
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1116 * are modified by "AnonymizeInstance()" if anonymizing a single
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1117 * instance, or by "RetrieveMappedUid()" if anonymizing a
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1118 * patient/study/series.
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1119 **/
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1120
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1121
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1122 // Some more removals (from the experience of DICOM files at the CHU of Liege)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1123 removals.insert(DicomTag(0x0010, 0x1040)); // Patient's Address
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1124 removals.insert(DicomTag(0x0032, 0x1032)); // Requesting Physician
463
005aaeb63414 anonymization of PatientTelephoneNumbers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 446
diff changeset
1125 removals.insert(DicomTag(0x0010, 0x2154)); // PatientTelephoneNumbers
527
d47ae896a754 anonymization of the medical alerts tag
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 519
diff changeset
1126 removals.insert(DicomTag(0x0010, 0x2000)); // Medical Alerts
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1127
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1128 // Set the DeidentificationMethod tag
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1129 replacements.insert(std::make_pair(DicomTag(0x0012, 0x0063), "Orthanc " ORTHANC_VERSION " - PS 3.15-2008 Table E.1-1"));
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1130
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1131 // Set the PatientIdentityRemoved tag
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1132 replacements.insert(std::make_pair(DicomTag(0x0012, 0x0062), "YES"));
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1133 }
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1134
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1135
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1136 static bool ParseModifyRequest(Removals& removals,
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1137 Replacements& replacements,
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1138 bool& removePrivateTags,
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1139 const RestApi::PostCall& call)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1140 {
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1141 removePrivateTags = false;
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1142 Json::Value request;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1143 if (call.ParseJsonRequest(request) &&
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1144 request.isObject())
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1145 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1146 Json::Value removalsPart = Json::arrayValue;
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1147 Json::Value replacementsPart = Json::objectValue;
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1148
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1149 if (request.isMember("Remove"))
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1150 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1151 removalsPart = request["Remove"];
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1152 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1153
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1154 if (request.isMember("Replace"))
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1155 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1156 replacementsPart = request["Replace"];
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1157 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1158
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1159 if (request.isMember("RemovePrivateTags"))
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1160 {
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1161 removePrivateTags = true;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1162 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1163
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1164 ParseRemovals(removals, removalsPart);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1165 ParseReplacements(replacements, replacementsPart);
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1166
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1167 return true;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1168 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1169 else
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1170 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1171 return false;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1172 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1173 }
305
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1174
86bb79522f19 name of the private tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1175
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1176 static bool ParseAnonymizationRequest(Removals& removals,
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1177 Replacements& replacements,
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1178 bool& removePrivateTags,
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1179 bool& keepPatientId,
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1180 RestApi::PostCall& call)
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1181 {
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1182 RETRIEVE_CONTEXT(call);
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1183
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1184 removePrivateTags = true;
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1185 keepPatientId = false;
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1186
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1187 Json::Value request;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1188 if (call.ParseJsonRequest(request) &&
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1189 request.isObject())
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1190 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1191 Json::Value keepPart = Json::arrayValue;
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1192 Json::Value removalsPart = Json::arrayValue;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1193 Json::Value replacementsPart = Json::objectValue;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1194
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1195 if (request.isMember("Keep"))
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1196 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1197 keepPart = request["Keep"];
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1198 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1199
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1200 if (request.isMember("KeepPrivateTags"))
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1201 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1202 removePrivateTags = false;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1203 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1204
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1205 if (request.isMember("Replace"))
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1206 {
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1207 replacementsPart = request["Replace"];
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1208 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1209
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1210 Removals toKeep;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1211 ParseRemovals(toKeep, keepPart);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1212
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1213 SetupAnonymization(removals, replacements);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1214
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1215 for (Removals::iterator it = toKeep.begin(); it != toKeep.end(); it++)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1216 {
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1217 if (*it == DICOM_TAG_PATIENT_ID)
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1218 {
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1219 keepPatientId = true;
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1220 }
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1221
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1222 removals.erase(*it);
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1223 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1224
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1225 Removals additionalRemovals;
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1226 ParseRemovals(additionalRemovals, removalsPart);
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1227
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1228 for (Removals::iterator it = additionalRemovals.begin();
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1229 it != additionalRemovals.end(); it++)
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1230 {
321
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 317
diff changeset
1231 removals.insert(*it);
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1232 }
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1233
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1234 ParseReplacements(replacements, replacementsPart);
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1235
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1236 // Generate random Patient's Name if none is specified
557
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 527
diff changeset
1237 if (toKeep.find(DICOM_TAG_PATIENT_NAME) == toKeep.end() &&
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 527
diff changeset
1238 replacements.find(DICOM_TAG_PATIENT_NAME) == replacements.end())
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1239 {
557
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 527
diff changeset
1240 replacements.insert(std::make_pair(DICOM_TAG_PATIENT_NAME, GeneratePatientName(context)));
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1241 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1242
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1243 return true;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1244 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1245 else
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1246 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1247 return false;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1248 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1249 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1250
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1251
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1252 static void AnonymizeOrModifyInstance(Removals& removals,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1253 Replacements& replacements,
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1254 bool removePrivateTags,
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1255 RestApi::PostCall& call)
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1256 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 314
diff changeset
1257 boost::mutex::scoped_lock lock(cacheMutex_);
302
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1258 RETRIEVE_CONTEXT(call);
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1259
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1260 std::string id = call.GetUriComponent("id", "");
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1261 ParsedDicomFile& dicom = context.GetDicomFile(id);
238134081136 modification of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 299
diff changeset
1262
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1263 std::auto_ptr<ParsedDicomFile> modified(dicom.Clone());
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1264 ReplaceInstanceInternal(*modified, removals, replacements, DicomReplaceMode_InsertIfAbsent, removePrivateTags);
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1265 modified->Answer(call.GetOutput());
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1266 }
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1267
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1268
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1269 static bool RetrieveMappedUid(ParsedDicomFile& dicom,
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1270 DicomRootLevel level,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1271 Replacements& replacements,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1272 UidMap& uidMap)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1273 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1274 std::auto_ptr<DicomTag> tag;
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1275
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1276 switch (level)
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1277 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1278 case DicomRootLevel_Series:
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1279 tag.reset(new DicomTag(DICOM_TAG_SERIES_INSTANCE_UID));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1280 break;
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1281
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1282 case DicomRootLevel_Study:
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1283 tag.reset(new DicomTag(DICOM_TAG_STUDY_INSTANCE_UID));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1284 break;
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1285
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1286 case DicomRootLevel_Patient:
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1287 tag.reset(new DicomTag(DICOM_TAG_PATIENT_ID));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1288 break;
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1289
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1290 default:
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1291 throw OrthancException(ErrorCode_InternalError);
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1292 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1293
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1294 std::string original;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1295 if (!dicom.GetTagValue(original, *tag))
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1296 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1297 throw OrthancException(ErrorCode_InternalError);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1298 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1299
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1300 std::string mapped;
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1301 bool isNew;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1302
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1303 UidMap::const_iterator previous = uidMap.find(std::make_pair(level, original));
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1304 if (previous == uidMap.end())
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1305 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1306 mapped = FromDcmtkBridge::GenerateUniqueIdentifier(level);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1307 uidMap.insert(std::make_pair(std::make_pair(level, original), mapped));
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1308 isNew = true;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1309 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1310 else
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1311 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1312 mapped = previous->second;
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1313 isNew = false;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1314 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1315
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1316 replacements[*tag] = mapped;
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1317 return isNew;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1318 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1319
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1320
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1321 static void AnonymizeOrModifyResource(Removals& removals,
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1322 Replacements& replacements,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1323 bool removePrivateTags,
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1324 bool keepPatientId,
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1325 MetadataType metadataType,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1326 ChangeType changeType,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1327 ResourceType resourceType,
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1328 RestApi::PostCall& call)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1329 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1330 typedef std::list<std::string> Instances;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1331
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1332 bool isFirst = true;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1333 Json::Value result(Json::objectValue);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1334
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1335 boost::mutex::scoped_lock lock(cacheMutex_);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1336 RETRIEVE_CONTEXT(call);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1337
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1338 Instances instances;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1339 std::string id = call.GetUriComponent("id", "");
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1340 context.GetIndex().GetChildInstances(instances, id);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1341
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1342 if (instances.size() == 0)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1343 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1344 return;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1345 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1346
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1347
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1348 /**
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1349 * Loop over all the instances of the resource.
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1350 **/
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1351
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1352 UidMap uidMap;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1353 for (Instances::const_iterator it = instances.begin();
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1354 it != instances.end(); it++)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1355 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1356 LOG(INFO) << "Modifying instance " << *it;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1357 ParsedDicomFile& original = context.GetDicomFile(*it);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1358
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1359 DicomInstanceHasher originalHasher = original.GetHasher();
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1360
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1361 if (isFirst && keepPatientId)
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1362 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1363 std::string patientId = originalHasher.GetPatientId();
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1364 uidMap[std::make_pair(DicomRootLevel_Patient, patientId)] = patientId;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1365 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1366
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1367 bool isNewSeries = RetrieveMappedUid(original, DicomRootLevel_Series, replacements, uidMap);
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1368 bool isNewStudy = RetrieveMappedUid(original, DicomRootLevel_Study, replacements, uidMap);
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1369 bool isNewPatient = RetrieveMappedUid(original, DicomRootLevel_Patient, replacements, uidMap);
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1370
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1371
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1372 /**
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1373 * Compute the resulting DICOM instance and store it into the Orthanc store.
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1374 **/
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1375
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1376 std::auto_ptr<ParsedDicomFile> modified(original.Clone());
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1377 ReplaceInstanceInternal(*modified, removals, replacements, DicomReplaceMode_InsertIfAbsent, removePrivateTags);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1378
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1379 std::string modifiedInstance;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1380 if (context.Store(modifiedInstance, modified->GetDicom()) != StoreStatus_Success)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1381 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1382 LOG(ERROR) << "Error while storing a modified instance " << *it;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1383 return;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1384 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1385
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1386
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1387 /**
443
be93b666ed79 link anonymized to original resource in OrthancExplorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1388 * Record metadata information (AnonymizedFrom/ModifiedFrom).
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1389 **/
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1390
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1391 DicomInstanceHasher modifiedHasher = modified->GetHasher();
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1392
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1393 if (isNewSeries)
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1394 {
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1395 context.GetIndex().SetMetadata(modifiedHasher.HashSeries(),
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1396 metadataType, originalHasher.HashSeries());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1397 }
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1398
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1399 if (isNewStudy)
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1400 {
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1401 context.GetIndex().SetMetadata(modifiedHasher.HashStudy(),
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1402 metadataType, originalHasher.HashStudy());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1403 }
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1404
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1405 if (isNewPatient)
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1406 {
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1407 context.GetIndex().SetMetadata(modifiedHasher.HashPatient(),
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1408 metadataType, originalHasher.HashPatient());
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1409 }
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1410
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1411 assert(*it == originalHasher.HashInstance());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1412 assert(modifiedInstance == modifiedHasher.HashInstance());
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1413 context.GetIndex().SetMetadata(modifiedInstance, metadataType, *it);
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1414
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1415
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1416 /**
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1417 * Compute the JSON object that is returned by the REST call.
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1418 **/
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1419
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1420 if (isFirst)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1421 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1422 std::string newId;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1423
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1424 switch (resourceType)
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1425 {
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1426 case ResourceType_Series:
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1427 newId = modifiedHasher.HashSeries();
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1428 break;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1429
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1430 case ResourceType_Study:
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1431 newId = modifiedHasher.HashStudy();
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1432 break;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1433
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1434 case ResourceType_Patient:
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1435 newId = modifiedHasher.HashPatient();
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1436 break;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1437
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1438 default:
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1439 throw OrthancException(ErrorCode_InternalError);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1440 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1441
434
ccf3a0a43dac EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 418
diff changeset
1442 result["Type"] = EnumerationToString(resourceType);
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1443 result["ID"] = newId;
348
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1444 result["Path"] = GetBasePath(resourceType, newId);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1445 result["PatientID"] = modifiedHasher.HashPatient();
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1446 isFirst = false;
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1447 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1448 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1449
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1450 call.GetOutput().AnswerJson(result);
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1451 }
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1452
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1453
1082e8121d10 refactoring anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 344
diff changeset
1454
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1455 static void ModifyInstance(RestApi::PostCall& call)
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1456 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1457 Removals removals;
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1458 Replacements replacements;
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1459 bool removePrivateTags;
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1460
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1461 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1462 {
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1463 AnonymizeOrModifyInstance(removals, replacements, removePrivateTags, call);
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1464 }
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1465 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1466
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1467
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1468 static void AnonymizeInstance(RestApi::PostCall& call)
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1469 {
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1470 Removals removals;
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1471 Replacements replacements;
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1472 bool removePrivateTags, keepPatientId;
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1473
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1474 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, keepPatientId, call))
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1475 {
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1476 // TODO Handle "keepPatientId"
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1477
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1478 // Generate random patient ID if not specified
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1479 if (replacements.find(DICOM_TAG_PATIENT_ID) == replacements.end())
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1480 {
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1481 replacements.insert(std::make_pair(DICOM_TAG_PATIENT_ID,
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1482 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Patient)));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1483 }
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1484
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1485 // Generate random study UID if not specified
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1486 if (replacements.find(DICOM_TAG_STUDY_INSTANCE_UID) == replacements.end())
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1487 {
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1488 replacements.insert(std::make_pair(DICOM_TAG_STUDY_INSTANCE_UID,
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1489 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Study)));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1490 }
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1491
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1492 // Generate random series UID if not specified
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1493 if (replacements.find(DICOM_TAG_SERIES_INSTANCE_UID) == replacements.end())
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1494 {
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1495 replacements.insert(std::make_pair(DICOM_TAG_SERIES_INSTANCE_UID,
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1496 FromDcmtkBridge::GenerateUniqueIdentifier(DicomRootLevel_Series)));
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1497 }
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1498
314
4f17834a50b6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 313
diff changeset
1499 AnonymizeOrModifyInstance(removals, replacements, removePrivateTags, call);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1500 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1501 }
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1502
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1503
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1504 static void ModifySeriesInplace(RestApi::PostCall& call)
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 305
diff changeset
1505 {
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1506 Removals removals;
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 308
diff changeset
1507 Replacements replacements;
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1508 bool removePrivateTags;
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1509
312
1642a354fec8 flexible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1510 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1511 {
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1512 AnonymizeOrModifyResource(removals, replacements, removePrivateTags, true /*keepPatientId*/,
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1513 MetadataType_ModifiedFrom, ChangeType_ModifiedSeries,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1514 ResourceType_Series, call);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1515 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1516 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 314
diff changeset
1517
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1518
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1519 static void AnonymizeSeriesInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1520 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1521 Removals removals;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1522 Replacements replacements;
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1523 bool removePrivateTags, keepPatientId;
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1524
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1525 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, keepPatientId, call))
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1526 {
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1527 AnonymizeOrModifyResource(removals, replacements, removePrivateTags, keepPatientId,
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1528 MetadataType_AnonymizedFrom, ChangeType_AnonymizedSeries,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1529 ResourceType_Series, call);
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1530 }
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1531 }
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1532
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1533
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1534 static void ModifyStudyInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1535 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1536 Removals removals;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1537 Replacements replacements;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1538 bool removePrivateTags;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1539
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1540 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1541 {
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1542 AnonymizeOrModifyResource(removals, replacements, removePrivateTags, true /*keepPatientId*/,
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1543 MetadataType_ModifiedFrom, ChangeType_ModifiedStudy,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1544 ResourceType_Study, call);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1545 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1546 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1547
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1548
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1549 static void AnonymizeStudyInplace(RestApi::PostCall& call)
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1550 {
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1551 Removals removals;
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1552 Replacements replacements;
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1553 bool removePrivateTags, keepPatientId;
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1554
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1555 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, keepPatientId, call))
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1556 {
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1557 AnonymizeOrModifyResource(removals, replacements, removePrivateTags, keepPatientId,
349
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1558 MetadataType_AnonymizedFrom, ChangeType_AnonymizedStudy,
c5edf0cc6e95 switch to refactored version
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 348
diff changeset
1559 ResourceType_Study, call);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1560 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1561 }
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1562
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1563
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1564 /*static void ModifyPatientInplace(RestApi::PostCall& call)
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1565 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1566 Removals removals;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1567 Replacements replacements;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1568 bool removePrivateTags;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1569
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1570 if (ParseModifyRequest(removals, replacements, removePrivateTags, call))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1571 {
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1572 AnonymizeOrModifyResource(false, removals, replacements, removePrivateTags,
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1573 MetadataType_ModifiedFrom, ChangeType_ModifiedPatient,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1574 ResourceType_Patient, call);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1575 }
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1576 }*/
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1577
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1578
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1579 static void AnonymizePatientInplace(RestApi::PostCall& call)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1580 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1581 Removals removals;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1582 Replacements replacements;
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1583 bool removePrivateTags, keepPatientId;
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1584
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1585 if (ParseAnonymizationRequest(removals, replacements, removePrivateTags, keepPatientId, call))
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1586 {
602
d5043ff68d58 Possibility to keep the PatientID during an anonymization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 557
diff changeset
1587 AnonymizeOrModifyResource(removals, replacements, removePrivateTags, keepPatientId,
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1588 MetadataType_AnonymizedFrom, ChangeType_AnonymizedPatient,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1589 ResourceType_Patient, call);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1590 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1591 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1592
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1593
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1594 // Handling of metadata -----------------------------------------------------
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1595
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1596 static void ListMetadata(RestApi::GetCall& call)
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1597 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1598 RETRIEVE_CONTEXT(call);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1599
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1600 std::string publicId = call.GetUriComponent("id", "");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1601 std::list<MetadataType> metadata;
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1602 if (context.GetIndex().ListAvailableMetadata(metadata, publicId))
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1603 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1604 Json::Value result = Json::arrayValue;
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1605
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1606 for (std::list<MetadataType>::const_iterator
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1607 it = metadata.begin(); it != metadata.end(); it++)
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1608 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1609 result.append(EnumerationToString(*it));
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1610 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1611
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1612 call.GetOutput().AnswerJson(result);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1613 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1614 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1615
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1616
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1617 static void GetMetadata(RestApi::GetCall& call)
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1618 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1619 RETRIEVE_CONTEXT(call);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1620
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1621 std::string publicId = call.GetUriComponent("id", "");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1622 std::string name = call.GetUriComponent("name", "");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1623 MetadataType metadata = StringToMetadata(name);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1624
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1625 std::string value;
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1626 if (context.GetIndex().LookupMetadata(value, publicId, metadata))
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1627 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1628 call.GetOutput().AnswerBuffer(value, "text/plain");
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1629 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1630 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1631
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
1632
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1633 static void DeleteMetadata(RestApi::DeleteCall& call)
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1634 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1635 RETRIEVE_CONTEXT(call);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1636
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1637 std::string publicId = call.GetUriComponent("id", "");
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1638 std::string name = call.GetUriComponent("name", "");
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1639 MetadataType metadata = StringToMetadata(name);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1640
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1641 if (metadata >= MetadataType_StartUser &&
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1642 metadata <= MetadataType_EndUser)
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1643 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1644 // It is forbidden to modify internal metadata
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1645 context.GetIndex().DeleteMetadata(publicId, metadata);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1646 call.GetOutput().AnswerBuffer("", "text/plain");
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1647 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1648 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1649
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1650
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1651 static void SetMetadata(RestApi::PutCall& call)
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1652 {
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1653 RETRIEVE_CONTEXT(call);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1654
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1655 std::string publicId = call.GetUriComponent("id", "");
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1656 std::string name = call.GetUriComponent("name", "");
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1657 MetadataType metadata = StringToMetadata(name);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1658 std::string value = call.GetPutBody();
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1659
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1660 if (metadata >= MetadataType_StartUser &&
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1661 metadata <= MetadataType_EndUser)
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1662 {
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1663 // It is forbidden to modify internal metadata
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1664 context.GetIndex().SetMetadata(publicId, metadata, value);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1665 call.GetOutput().AnswerBuffer("", "text/plain");
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1666 }
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1667 }
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1668
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1669
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1670 static void GetResourceStatistics(RestApi::GetCall& call)
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1671 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1672 RETRIEVE_CONTEXT(call);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1673 std::string publicId = call.GetUriComponent("id", "");
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1674 Json::Value result;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1675 context.GetIndex().GetStatistics(result, publicId);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1676 call.GetOutput().AnswerJson(result);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1677 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1678
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1679
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1680
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1681 // Orthanc Peers ------------------------------------------------------------
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1682
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1683 static bool IsExistingPeer(const OrthancRestApi::SetOfStrings& peers,
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1684 const std::string& id)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1685 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1686 return peers.find(id) != peers.end();
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1687 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1688
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1689 static void ListPeers(RestApi::GetCall& call)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1690 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1691 RETRIEVE_PEERS(call);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1692
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1693 Json::Value result = Json::arrayValue;
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1694 for (OrthancRestApi::SetOfStrings::const_iterator
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1695 it = peers.begin(); it != peers.end(); it++)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1696 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1697 result.append(*it);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1698 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1699
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1700 call.GetOutput().AnswerJson(result);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1701 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1702
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1703 static void ListPeerOperations(RestApi::GetCall& call)
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1704 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1705 RETRIEVE_PEERS(call);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1706
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1707 std::string id = call.GetUriComponent("id", "");
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1708 if (IsExistingPeer(peers, id))
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1709 {
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1710 Json::Value result = Json::arrayValue;
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1711 result.append("store");
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1712 call.GetOutput().AnswerJson(result);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1713 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1714 }
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1715
485
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1716 static void PeerStore(RestApi::PostCall& call)
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1717 {
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1718 RETRIEVE_CONTEXT(call);
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1719
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1720 std::string remote = call.GetUriComponent("id", "");
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1721
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1722 std::list<std::string> instances;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1723 if (!GetInstancesToExport(instances, remote, call))
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1724 {
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1725 return;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1726 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1727
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1728 std::string url, username, password;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1729 GetOrthancPeer(remote, url, username, password);
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1730
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1731 // Configure the HTTP client
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1732 HttpClient client;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1733 if (username.size() != 0 && password.size() != 0)
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1734 {
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1735 client.SetCredentials(username.c_str(), password.c_str());
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1736 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1737
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1738 client.SetUrl(url + "instances");
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1739 client.SetMethod(HttpMethod_Post);
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1740
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1741 // Loop over the instances that are to be sent
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1742 for (std::list<std::string>::const_iterator
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1743 it = instances.begin(); it != instances.end(); it++)
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1744 {
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1745 LOG(INFO) << "Sending resource " << *it << " to peer \"" << remote << "\"";
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1746
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1747 context.ReadFile(client.AccessPostData(), *it, FileContentType_Dicom);
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1748
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1749 std::string answer;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1750 if (!client.Apply(answer))
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1751 {
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1752 LOG(ERROR) << "Unable to send resource " << *it << " to peer \"" << remote << "\"";
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1753 return;
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1754 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1755 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1756
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1757 call.GetOutput().AnswerBuffer("{}", "application/json");
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1758 }
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1759
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1760
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1761
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1762
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1763
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1764 // Registration of the various REST handlers --------------------------------
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1765
230
ae2367145b49 renames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 229
diff changeset
1766 OrthancRestApi::OrthancRestApi(ServerContext& context) :
224
4eb0c7ce86c9 refactoring for store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 218
diff changeset
1767 context_(context)
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1768 {
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1769 GetListOfDicomModalities(modalities_);
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1770 GetListOfOrthancPeers(peers_);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1771
211
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1772 Register("/", ServeRoot);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1773 Register("/system", GetSystemInformation);
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
1774 Register("/statistics", GetStatistics);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1775 Register("/changes", GetChanges);
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
1776 Register("/changes", DeleteChanges);
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1777 Register("/exports", GetExports);
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 403
diff changeset
1778 Register("/exports", DeleteExports);
211
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1779
216
e5d5d4a9a326 refactored upload of dicom through http
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 215
diff changeset
1780 Register("/instances", UploadDicomFile);
211
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1781 Register("/instances", ListResources<ResourceType_Instance>);
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1782 Register("/patients", ListResources<ResourceType_Patient>);
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1783 Register("/series", ListResources<ResourceType_Series>);
b7aea293b965 list of resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 210
diff changeset
1784 Register("/studies", ListResources<ResourceType_Study>);
212
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1785
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1786 Register("/instances/{id}", DeleteSingleResource<ResourceType_Instance>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1787 Register("/instances/{id}", GetSingleResource<ResourceType_Instance>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1788 Register("/patients/{id}", DeleteSingleResource<ResourceType_Patient>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1789 Register("/patients/{id}", GetSingleResource<ResourceType_Patient>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1790 Register("/series/{id}", DeleteSingleResource<ResourceType_Series>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1791 Register("/series/{id}", GetSingleResource<ResourceType_Series>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1792 Register("/studies/{id}", DeleteSingleResource<ResourceType_Study>);
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 211
diff changeset
1793 Register("/studies/{id}", GetSingleResource<ResourceType_Study>);
250
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1794
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1795 Register("/patients/{id}/archive", GetArchive<ResourceType_Patient>);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1796 Register("/studies/{id}/archive", GetArchive<ResourceType_Study>);
f23318b11b39 creation of zip files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 249
diff changeset
1797 Register("/series/{id}/archive", GetArchive<ResourceType_Series>);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1798
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1799 Register("/instances/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1800 Register("/patients/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1801 Register("/studies/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1802 Register("/series/{id}/statistics", GetResourceStatistics);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1803
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1804 Register("/instances/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1805 Register("/instances/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1806 Register("/instances/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1807 Register("/instances/{id}/metadata/{name}", SetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1808 Register("/patients/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1809 Register("/patients/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1810 Register("/patients/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1811 Register("/patients/{id}/metadata/{name}", SetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1812 Register("/series/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1813 Register("/series/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1814 Register("/series/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1815 Register("/series/{id}/metadata/{name}", SetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1816 Register("/studies/{id}/metadata", ListMetadata);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 437
diff changeset
1817 Register("/studies/{id}/metadata/{name}", DeleteMetadata);
437
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1818 Register("/studies/{id}/metadata/{name}", GetMetadata);
beca6747945e PUT on metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1819 Register("/studies/{id}/metadata/{name}", SetMetadata);
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1820
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
1821 Register("/patients/{id}/protected", IsProtectedPatient);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 253
diff changeset
1822 Register("/patients/{id}/protected", SetPatientProtection);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1823 Register("/instances/{id}/file", GetInstanceFile);
483
8c3573d28868 export dicom instances to the filesystem
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 465
diff changeset
1824 Register("/instances/{id}/export", ExportInstanceFile);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1825 Register("/instances/{id}/tags", GetInstanceTags<false>);
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1826 Register("/instances/{id}/simplified-tags", GetInstanceTags<true>);
214
03817919169b list of frames
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 213
diff changeset
1827 Register("/instances/{id}/frames", ListFrames);
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 272
diff changeset
1828 Register("/instances/{id}/content/*", GetRawContent);
213
4ce7fdcc8879 access to tags, simplified-tags and file of an instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 212
diff changeset
1829
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1830 Register("/instances/{id}/frames/{frame}/preview", GetImage<ImageExtractionMode_Preview>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1831 Register("/instances/{id}/frames/{frame}/image-uint8", GetImage<ImageExtractionMode_UInt8>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1832 Register("/instances/{id}/frames/{frame}/image-uint16", GetImage<ImageExtractionMode_UInt16>);
465
7a966b440f19 signed images to PNG
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 463
diff changeset
1833 Register("/instances/{id}/frames/{frame}/image-int16", GetImage<ImageExtractionMode_Int16>);
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1834 Register("/instances/{id}/preview", GetImage<ImageExtractionMode_Preview>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1835 Register("/instances/{id}/image-uint8", GetImage<ImageExtractionMode_UInt8>);
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1836 Register("/instances/{id}/image-uint16", GetImage<ImageExtractionMode_UInt16>);
465
7a966b440f19 signed images to PNG
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 463
diff changeset
1837 Register("/instances/{id}/image-int16", GetImage<ImageExtractionMode_Int16>);
215
c07170f3f4f7 refactoring of access to images in REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 214
diff changeset
1838
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1839 Register("/modalities", ListModalities);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1840 Register("/modalities/{id}", ListModalityOperations);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1841 Register("/modalities/{id}/find-patient", DicomFindPatient);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1842 Register("/modalities/{id}/find-study", DicomFindStudy);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1843 Register("/modalities/{id}/find-series", DicomFindSeries);
499
7db04aa5104f instance-level find scu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 485
diff changeset
1844 Register("/modalities/{id}/find-instance", DicomFindInstance);
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1845 Register("/modalities/{id}/find", DicomFind);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1846 Register("/modalities/{id}/store", DicomStore);
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1847
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1848 Register("/peers", ListPeers);
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1849 Register("/peers/{id}", ListPeerOperations);
485
bdbde1fbfab3 send resources through HTTP
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 484
diff changeset
1850 Register("/peers/{id}/store", PeerStore);
484
b8ace6fc1d1f preparation for handling Orthanc peers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 483
diff changeset
1851
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 303
diff changeset
1852 Register("/instances/{id}/modify", ModifyInstance);
308
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1853 Register("/series/{id}/modify", ModifySeriesInplace);
fbf2b2282086 inplace modification of series and studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 307
diff changeset
1854 Register("/studies/{id}/modify", ModifyStudyInplace);
515
a8be42bcf2bb Link from modified to original resource in Orthanc Explorer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 499
diff changeset
1855 //Register("/patients/{id}/modify", ModifyPatientInplace);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1856
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1857 Register("/instances/{id}/anonymize", AnonymizeInstance);
316
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1858 Register("/series/{id}/anonymize", AnonymizeSeriesInplace);
d526ac73c886 anonymization of studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1859 Register("/studies/{id}/anonymize", AnonymizeStudyInplace);
351
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 350
diff changeset
1860 Register("/patients/{id}/anonymize", AnonymizePatientInplace);
342
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
1861
a58a8be26aff generation of random uid in the rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 321
diff changeset
1862 Register("/tools/generate-uid", GenerateUid);
418
b79bf2f4ab2e execution of lua through REST
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 413
diff changeset
1863 Register("/tools/execute-script", ExecuteScript);
446
b7ef1a7d857e /tools/now
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 443
diff changeset
1864 Register("/tools/now", GetNowIsoString);
210
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1865 }
96b7918a6a18 start of the refactoring of the Orthanc REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1866 }