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annotate Core/DicomParsing/DicomDirWriter.cpp @ 3653:468181e2f090

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Fix issue #166 (CMake find_boost version is now broken with newer boost/cmake)
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 05 Feb 2020 15:23:22 +0100
parents 94f4a18a79cc
children 2a170a8f1faf
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License as
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9 * published by the Free Software Foundation, either version 3 of the
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10 * License, or (at your option) any later version.
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11 *
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12 * In addition, as a special exception, the copyright holders of this
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13 * program give permission to link the code of its release with the
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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15 * that use the same license as the "OpenSSL" library), and distribute
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16 * the linked executables. You must obey the GNU General Public License
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17 * in all respects for all of the code used other than "OpenSSL". If you
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18 * modify file(s) with this exception, you may extend this exception to
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19 * your version of the file(s), but you are not obligated to do so. If
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20 * you do not wish to do so, delete this exception statement from your
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21 * version. If you delete this exception statement from all source files
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22 * in the program, then also delete it here.
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23 *
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24 * This program is distributed in the hope that it will be useful, but
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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27 * General Public License for more details.
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28 *
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29 * You should have received a copy of the GNU General Public License
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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31 **/
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37 /*=========================================================================
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38
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39 This file is based on portions of the following project:
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40
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41 Program: DCMTK 3.6.0
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42 Module: http://dicom.offis.de/dcmtk.php.en
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43
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44 Copyright (C) 1994-2011, OFFIS e.V.
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45 All rights reserved.
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46
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47 This software and supporting documentation were developed by
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48
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49 OFFIS e.V.
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50 R&D Division Health
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51 Escherweg 2
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52 26121 Oldenburg, Germany
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53
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54 Redistribution and use in source and binary forms, with or without
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55 modification, are permitted provided that the following conditions
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56 are met:
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57
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58 - Redistributions of source code must retain the above copyright
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59 notice, this list of conditions and the following disclaimer.
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60
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61 - Redistributions in binary form must reproduce the above copyright
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62 notice, this list of conditions and the following disclaimer in the
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63 documentation and/or other materials provided with the distribution.
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64
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65 - Neither the name of OFFIS nor the names of its contributors may be
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66 used to endorse or promote products derived from this software
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67 without specific prior written permission.
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68
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69 THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
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70 "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
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71 LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
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72 A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
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73 HOLDER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
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74 SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
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75 LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
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76 DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
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77 THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
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78 (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
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79 OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
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80
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81 =========================================================================*/
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82
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85 /***
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86
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87 Validation:
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88
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89 # sudo apt-get install dicom3tools
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90 # dciodvfy DICOMDIR 2>&1 | less
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91 # dcentvfy DICOMDIR 2>&1 | less
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93 http://www.dclunie.com/dicom3tools/dciodvfy.html
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95 DICOMDIR viewer working with Wine under Linux:
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96 http://www.microdicom.com/
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97
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98 ***/
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101 #include "../PrecompiledHeaders.h"
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102 #include "DicomDirWriter.h"
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103
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104 #include "FromDcmtkBridge.h"
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105 #include "ToDcmtkBridge.h"
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106
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107 #include "../Logging.h"
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108 #include "../OrthancException.h"
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109 #include "../TemporaryFile.h"
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110 #include "../Toolbox.h"
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111 #include "../SystemToolbox.h"
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112
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113 #include <dcmtk/dcmdata/dcdicdir.h>
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114 #include <dcmtk/dcmdata/dcmetinf.h>
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115 #include <dcmtk/dcmdata/dcdeftag.h>
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116 #include <dcmtk/dcmdata/dcuid.h>
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117 #include <dcmtk/dcmdata/dcddirif.h>
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118 #include <dcmtk/dcmdata/dcvrui.h>
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119 #include <dcmtk/dcmdata/dcsequen.h>
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120 #include <dcmtk/dcmdata/dcostrmf.h>
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121 #include "dcmtk/dcmdata/dcvrda.h" /* for class DcmDate */
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122 #include "dcmtk/dcmdata/dcvrtm.h" /* for class DcmTime */
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123
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124 #include <memory>
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125
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126 namespace Orthanc
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127 {
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128 class DicomDirWriter::PImpl
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129 {
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130 private:
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131 bool utc_;
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132 std::string fileSetId_;
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133 bool extendedSopClass_;
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134 TemporaryFile file_;
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135 std::auto_ptr<DcmDicomDir> dir_;
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136
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137 typedef std::pair<ResourceType, std::string> IndexKey;
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138 typedef std::map<IndexKey, DcmDirectoryRecord* > Index;
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139 Index index_;
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140
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141
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142 DcmDicomDir& GetDicomDir()
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143 {
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144 if (dir_.get() == NULL)
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145 {
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146 dir_.reset(new DcmDicomDir(file_.GetPath().c_str(),
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147 fileSetId_.c_str()));
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148 //SetTagValue(dir_->getRootRecord(), DCM_SpecificCharacterSet, GetDicomSpecificCharacterSet(Encoding_Utf8));
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149 }
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150
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151 return *dir_;
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152 }
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153
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154
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155 DcmDirectoryRecord& GetRoot()
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156 {
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157 return GetDicomDir().getRootRecord();
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158 }
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159
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160
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161 static bool GetUtf8TagValue(std::string& result,
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162 DcmItem& source,
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163 Encoding encoding,
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164 bool hasCodeExtensions,
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165 const DcmTagKey& key)
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166 {
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167 DcmElement* element = NULL;
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168 result.clear();
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169
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170 if (source.findAndGetElement(key, element).good())
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171 {
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172 char* s = NULL;
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173 if (element->isLeaf() &&
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174 element->getString(s).good())
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175 {
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176 if (s != NULL)
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177 {
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178 result = Toolbox::ConvertToUtf8(s, encoding, hasCodeExtensions);
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179 }
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180
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181 return true;
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182 }
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183 }
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184
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185 return false;
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186 }
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187
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188
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189 static void SetTagValue(DcmDirectoryRecord& target,
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190 const DcmTagKey& key,
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191 const std::string& valueUtf8)
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192 {
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193 std::string s = Toolbox::ConvertFromUtf8(valueUtf8, Encoding_Ascii);
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194
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195 if (!target.putAndInsertString(key, s.c_str()).good())
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196 {
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197 throw OrthancException(ErrorCode_InternalError);
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198 }
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199 }
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200
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201
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202
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203 static bool CopyString(DcmDirectoryRecord& target,
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204 DcmDataset& source,
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205 Encoding encoding,
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206 bool hasCodeExtensions,
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207 const DcmTagKey& key,
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208 bool optional,
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209 bool copyEmpty)
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210 {
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211 if (optional &&
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212 !source.tagExistsWithValue(key) &&
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213 !(copyEmpty && source.tagExists(key)))
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214 {
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215 return false;
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216 }
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217
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218 std::string value;
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219 bool found = GetUtf8TagValue(value, source, encoding, hasCodeExtensions, key);
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220
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221 if (!found)
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222 {
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223 // We don't raise an exception if "!optional", even if this
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224 // results in an invalid DICOM file
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225 value.clear();
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226 }
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227
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228 SetTagValue(target, key, value);
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229 return found;
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230 }
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231
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232
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233 static void CopyStringType1(DcmDirectoryRecord& target,
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234 DcmDataset& source,
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235 Encoding encoding,
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236 bool hasCodeExtensions,
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237 const DcmTagKey& key)
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238 {
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239 CopyString(target, source, encoding, hasCodeExtensions, key, false, false);
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240 }
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241
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242 static void CopyStringType1C(DcmDirectoryRecord& target,
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243 DcmDataset& source,
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244 Encoding encoding,
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245 bool hasCodeExtensions,
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246 const DcmTagKey& key)
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247 {
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248 CopyString(target, source, encoding, hasCodeExtensions, key, true, false);
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249 }
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250
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251 static void CopyStringType2(DcmDirectoryRecord& target,
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252 DcmDataset& source,
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253 Encoding encoding,
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254 bool hasCodeExtensions,
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255 const DcmTagKey& key)
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256 {
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257 CopyString(target, source, encoding, hasCodeExtensions, key, false, true);
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258 }
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259
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260 static void CopyStringType3(DcmDirectoryRecord& target,
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261 DcmDataset& source,
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262 Encoding encoding,
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263 bool hasCodeExtensions,
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264 const DcmTagKey& key)
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265 {
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266 CopyString(target, source, encoding, hasCodeExtensions, key, true, true);
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267 }
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268
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269
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270 public:
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271 PImpl() :
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272 utc_(true), // By default, use UTC (universal time, not local time)
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273 fileSetId_("ORTHANC_MEDIA"),
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274 extendedSopClass_(false)
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275 {
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276 }
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277
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278 bool IsUtcUsed() const
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279 {
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280 return utc_;
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281 }
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282
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283
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284 void SetUtcUsed(bool utc)
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285 {
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286 utc_ = utc;
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287 }
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288
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289 void EnableExtendedSopClass(bool enable)
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290 {
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291 if (enable)
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292 {
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293 LOG(WARNING) << "Generating a DICOMDIR with type 3 attributes, "
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294 << "which leads to an Extended SOP Class";
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295 }
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296
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297 extendedSopClass_ = enable;
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298 }
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299
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300 bool IsExtendedSopClass() const
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301 {
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302 return extendedSopClass_;
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303 }
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304
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305 void FillPatient(DcmDirectoryRecord& record,
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306 DcmDataset& dicom,
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307 Encoding encoding,
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308 bool hasCodeExtensions)
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309 {
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310 // cf. "DicomDirInterface::buildPatientRecord()"
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311
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312 CopyStringType1C(record, dicom, encoding, hasCodeExtensions, DCM_PatientID);
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313 CopyStringType2(record, dicom, encoding, hasCodeExtensions, DCM_PatientName);
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314 }
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315
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316 void FillStudy(DcmDirectoryRecord& record,
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317 DcmDataset& dicom,
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318 Encoding encoding,
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319 bool hasCodeExtensions)
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320 {
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321 // cf. "DicomDirInterface::buildStudyRecord()"
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322
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323 std::string nowDate, nowTime;
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324 SystemToolbox::GetNowDicom(nowDate, nowTime, utc_);
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325
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326 std::string studyDate;
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327 if (!GetUtf8TagValue(studyDate, dicom, encoding, hasCodeExtensions, DCM_StudyDate) &&
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328 !GetUtf8TagValue(studyDate, dicom, encoding, hasCodeExtensions, DCM_SeriesDate) &&
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329 !GetUtf8TagValue(studyDate, dicom, encoding, hasCodeExtensions, DCM_AcquisitionDate) &&
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330 !GetUtf8TagValue(studyDate, dicom, encoding, hasCodeExtensions, DCM_ContentDate))
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331 {
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332 studyDate = nowDate;
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333 }
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334
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335 std::string studyTime;
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336 if (!GetUtf8TagValue(studyTime, dicom, encoding, hasCodeExtensions, DCM_StudyTime) &&
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337 !GetUtf8TagValue(studyTime, dicom, encoding, hasCodeExtensions, DCM_SeriesTime) &&
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338 !GetUtf8TagValue(studyTime, dicom, encoding, hasCodeExtensions, DCM_AcquisitionTime) &&
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339 !GetUtf8TagValue(studyTime, dicom, encoding, hasCodeExtensions, DCM_ContentTime))
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340 {
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341 studyTime = nowTime;
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342 }
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343
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344 /* copy attribute values from dataset to study record */
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345 SetTagValue(record, DCM_StudyDate, studyDate);
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346 SetTagValue(record, DCM_StudyTime, studyTime);
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347 CopyStringType2(record, dicom, encoding, hasCodeExtensions, DCM_StudyDescription);
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348 CopyStringType1(record, dicom, encoding, hasCodeExtensions, DCM_StudyInstanceUID);
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349 /* use type 1C instead of 1 in order to avoid unwanted overwriting */
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350 CopyStringType1C(record, dicom, encoding, hasCodeExtensions, DCM_StudyID);
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351 CopyStringType2(record, dicom, encoding, hasCodeExtensions, DCM_AccessionNumber);
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352 }
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353
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354 void FillSeries(DcmDirectoryRecord& record,
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355 DcmDataset& dicom,
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356 Encoding encoding,
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357 bool hasCodeExtensions)
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358 {
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359 // cf. "DicomDirInterface::buildSeriesRecord()"
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360
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361 /* copy attribute values from dataset to series record */
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362 CopyStringType1(record, dicom, encoding, hasCodeExtensions, DCM_Modality);
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363 CopyStringType1(record, dicom, encoding, hasCodeExtensions, DCM_SeriesInstanceUID);
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364 /* use type 1C instead of 1 in order to avoid unwanted overwriting */
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365 CopyStringType1C(record, dicom, encoding, hasCodeExtensions, DCM_SeriesNumber);
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366
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367 // Add extended (non-standard) type 3 tags, those are not generated by DCMTK
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368 // http://dicom.nema.org/medical/Dicom/2016a/output/chtml/part02/sect_7.3.html
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369 // https://groups.google.com/d/msg/orthanc-users/Y7LOvZMDeoc/9cp3kDgxAwAJ
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370 if (extendedSopClass_)
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371 {
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372 CopyStringType3(record, dicom, encoding, hasCodeExtensions, DCM_SeriesDescription);
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373 }
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374 }
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375
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376 void FillInstance(DcmDirectoryRecord& record,
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377 DcmDataset& dicom,
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diff changeset
378 Encoding encoding,
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
379 bool hasCodeExtensions,
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
380 DcmMetaInfo& metaInfo,
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
381 const char* path)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
382 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
383 // cf. "DicomDirInterface::buildImageRecord()"
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
384
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
385 /* copy attribute values from dataset to image record */
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
386 CopyStringType1(record, dicom, encoding, hasCodeExtensions, DCM_InstanceNumber);
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
387 //CopyElementType1C(record, dicom, encoding, hasCodeExtensions, DCM_ImageType);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
388
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
389 // REMOVED since 0.9.7: copyElementType1C(dicom, DCM_ReferencedImageSequence, record);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
390
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
391 std::string sopClassUid, sopInstanceUid, transferSyntaxUid;
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
392 if (!GetUtf8TagValue(sopClassUid, dicom, encoding, hasCodeExtensions, DCM_SOPClassUID) ||
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
393 !GetUtf8TagValue(sopInstanceUid, dicom, encoding, hasCodeExtensions, DCM_SOPInstanceUID) ||
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
394 !GetUtf8TagValue(transferSyntaxUid, metaInfo, encoding, hasCodeExtensions, DCM_TransferSyntaxUID))
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
395 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
396 throw OrthancException(ErrorCode_BadFileFormat);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
397 }
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
398
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
399 SetTagValue(record, DCM_ReferencedFileID, path);
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
400 SetTagValue(record, DCM_ReferencedSOPClassUIDInFile, sopClassUid);
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
401 SetTagValue(record, DCM_ReferencedSOPInstanceUIDInFile, sopInstanceUid);
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
402 SetTagValue(record, DCM_ReferencedTransferSyntaxUIDInFile, transferSyntaxUid);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
403 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
404
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
405
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
406
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
407 bool CreateResource(DcmDirectoryRecord*& target,
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
408 ResourceType level,
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
409 ParsedDicomFile& dicom,
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
410 const char* filename,
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
411 const char* path)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
412 {
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
413 DcmDataset& dataset = *dicom.GetDcmtkObject().getDataset();
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
414
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
415 bool hasCodeExtensions;
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
416 Encoding encoding = dicom.DetectEncoding(hasCodeExtensions);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
417
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
418 bool found;
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
419 std::string id;
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
420 E_DirRecType type;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
421
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
422 switch (level)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
423 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
424 case ResourceType_Patient:
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
425 if (!GetUtf8TagValue(id, dataset, encoding, hasCodeExtensions, DCM_PatientID))
3107
554832246eaa Fix issue #124 (GET /studies/ID/media fails for certain dicom file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
426 {
554832246eaa Fix issue #124 (GET /studies/ID/media fails for certain dicom file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
427 // Be tolerant about missing patient ID. Fixes issue #124
554832246eaa Fix issue #124 (GET /studies/ID/media fails for certain dicom file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
428 // (GET /studies/ID/media fails for certain dicom file).
554832246eaa Fix issue #124 (GET /studies/ID/media fails for certain dicom file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
429 id = "";
554832246eaa Fix issue #124 (GET /studies/ID/media fails for certain dicom file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
430 }
554832246eaa Fix issue #124 (GET /studies/ID/media fails for certain dicom file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
431
554832246eaa Fix issue #124 (GET /studies/ID/media fails for certain dicom file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
432 found = true;
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
433 type = ERT_Patient;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
434 break;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
435
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
436 case ResourceType_Study:
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
437 found = GetUtf8TagValue(id, dataset, encoding, hasCodeExtensions, DCM_StudyInstanceUID);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
438 type = ERT_Study;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
439 break;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
440
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
441 case ResourceType_Series:
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
442 found = GetUtf8TagValue(id, dataset, encoding, hasCodeExtensions, DCM_SeriesInstanceUID);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
443 type = ERT_Series;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
444 break;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
445
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
446 case ResourceType_Instance:
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
447 found = GetUtf8TagValue(id, dataset, encoding, hasCodeExtensions, DCM_SOPInstanceUID);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
448 type = ERT_Image;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
449 break;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
450
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
451 default:
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
452 throw OrthancException(ErrorCode_InternalError);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
453 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
454
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
455 if (!found)
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
456 {
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
457 throw OrthancException(ErrorCode_BadFileFormat);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
458 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
459
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
460 IndexKey key = std::make_pair(level, std::string(id.c_str()));
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
461 Index::iterator it = index_.find(key);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
462
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
463 if (it != index_.end())
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
464 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
465 target = it->second;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
466 return false; // Already existing
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
467 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
468
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
469 std::auto_ptr<DcmDirectoryRecord> record(new DcmDirectoryRecord(type, NULL, filename));
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
470
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
471 switch (level)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
472 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
473 case ResourceType_Patient:
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
474 FillPatient(*record, dataset, encoding, hasCodeExtensions);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
475 break;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
476
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
477 case ResourceType_Study:
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
478 FillStudy(*record, dataset, encoding, hasCodeExtensions);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
479 break;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
480
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
481 case ResourceType_Series:
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
482 FillSeries(*record, dataset, encoding, hasCodeExtensions);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
483 break;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
484
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
485 case ResourceType_Instance:
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
486 FillInstance(*record, dataset, encoding, hasCodeExtensions, *dicom.GetDcmtkObject().getMetaInfo(), path);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
487 break;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
488
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
489 default:
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
490 throw OrthancException(ErrorCode_InternalError);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
491 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
492
3217
cf8cbeb35f33 preliminary support of Korean character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3107
diff changeset
493 CopyStringType1C(*record, dataset, encoding, hasCodeExtensions, DCM_SpecificCharacterSet);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
494
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
495 target = record.get();
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
496 GetRoot().insertSub(record.release());
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
497 index_[key] = target;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
498
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
499 return true; // Newly created
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
500 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
501
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
502 void Read(std::string& s)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
503 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
504 if (!GetDicomDir().write(DICOMDIR_DEFAULT_TRANSFERSYNTAX,
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
505 EET_UndefinedLength /*encodingType*/,
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
506 EGL_withoutGL /*groupLength*/).good())
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
507 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
508 throw OrthancException(ErrorCode_InternalError);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
509 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
510
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
511 file_.Read(s);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
512 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
513
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
514 void SetFileSetId(const std::string& id)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
515 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
516 dir_.reset(NULL);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
517 fileSetId_ = id;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
518 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
519 };
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
520
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
521
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
522 DicomDirWriter::DicomDirWriter() : pimpl_(new PImpl)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
523 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
524 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
525
2475
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
526 void DicomDirWriter::SetUtcUsed(bool utc)
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
527 {
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
528 pimpl_->SetUtcUsed(utc);
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
529 }
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
530
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
531 bool DicomDirWriter::IsUtcUsed() const
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
532 {
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
533 return pimpl_->IsUtcUsed();
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
534 }
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
535
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
536 void DicomDirWriter::SetFileSetId(const std::string& id)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
537 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
538 pimpl_->SetFileSetId(id);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
539 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
540
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
541 void DicomDirWriter::Add(const std::string& directory,
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
542 const std::string& filename,
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
543 ParsedDicomFile& dicom)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
544 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
545 std::string path;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
546 if (directory.empty())
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
547 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
548 path = filename;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
549 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
550 else
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
551 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
552 if (directory[directory.length() - 1] == '/' ||
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
553 directory[directory.length() - 1] == '\\')
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
554 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
555 throw OrthancException(ErrorCode_ParameterOutOfRange);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
556 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
557
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
558 path = directory + '\\' + filename;
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
559 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
560
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
561 DcmDirectoryRecord* instance;
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
562 bool isNewInstance = pimpl_->CreateResource(instance, ResourceType_Instance, dicom, filename.c_str(), path.c_str());
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
563 if (isNewInstance)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
564 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
565 DcmDirectoryRecord* series;
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
566 bool isNewSeries = pimpl_->CreateResource(series, ResourceType_Series, dicom, filename.c_str(), NULL);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
567 series->insertSub(instance);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
568
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
569 if (isNewSeries)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
570 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
571 DcmDirectoryRecord* study;
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
572 bool isNewStudy = pimpl_->CreateResource(study, ResourceType_Study, dicom, filename.c_str(), NULL);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
573 study->insertSub(series);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
574
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
575 if (isNewStudy)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
576 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
577 DcmDirectoryRecord* patient;
1885
5be57564ffc4 refactoring dicomdir generation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1788
diff changeset
578 pimpl_->CreateResource(patient, ResourceType_Patient, dicom, filename.c_str(), NULL);
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
579 patient->insertSub(study);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
580 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
581 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
582 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
583 }
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
584
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
585 void DicomDirWriter::Encode(std::string& target)
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
586 {
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
587 pimpl_->Read(target);
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
588 }
2422
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
589
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
590
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
591 void DicomDirWriter::EnableExtendedSopClass(bool enable)
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
592 {
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
593 pimpl_->EnableExtendedSopClass(enable);
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
594 }
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
595
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
596
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
597 bool DicomDirWriter::IsExtendedSopClass() const
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
598 {
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
599 return pimpl_->IsExtendedSopClass();
b340f0a9022c New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2421
diff changeset
600 }
1121
82567bac5e25 Creation of ZIP archives for media storage, with DICOMDIR
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
601 }