annotate OrthancFramework/Sources/DicomFormat/DicomMap.cpp @ 5323:138e9d0c08c1

added DicomMap::GuessPixelDataValueRepresentation()
author Sebastien Jodogne <s.jodogne@gmail.com>
date Sun, 25 Jun 2023 12:29:39 +0200
parents 0ea402b4d901
children 48b8dae6dc77
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium
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6 * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
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7 *
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8 * This program is free software: you can redistribute it and/or
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9 * modify it under the terms of the GNU Lesser General Public License
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10 * as published by the Free Software Foundation, either version 3 of
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11 * the License, or (at your option) any later version.
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12 *
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13 * This program is distributed in the hope that it will be useful, but
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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16 * Lesser General Public License for more details.
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17 *
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18 * You should have received a copy of the GNU Lesser General Public
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19 * License along with this program. If not, see
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20 * <http://www.gnu.org/licenses/>.
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21 **/
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22
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23
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24 #include "../PrecompiledHeaders.h"
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25 #include "DicomMap.h"
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27 #include <stdio.h>
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28 #include <memory>
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29 #include <boost/algorithm/string/join.hpp>
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30
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31 #include "../Compatibility.h"
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32 #include "../Endianness.h"
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33 #include "../Logging.h"
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34 #include "../OrthancException.h"
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35 #include "../Toolbox.h"
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36 #include "DicomArray.h"
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37 #include "DicomImageInformation.h"
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38
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39 #if ORTHANC_ENABLE_DCMTK == 1
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40 #include "../DicomParsing/FromDcmtkBridge.h"
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41 #endif
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42
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43 #if !defined(__EMSCRIPTEN__)
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44 // Multithreading is not supported in WebAssembly
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45 # include <boost/thread/shared_mutex.hpp>
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46 #endif
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47
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48 namespace Orthanc
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49 {
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50 // WARNING: the DEFAULT list of main dicom tags below are the list as they
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51 // were in Orthanc 1.10 before we introduced the dynamic main dicom tags.
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52 // This list has not changed since Orthanc 1.4.2 and had a single change since
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53 // Orthanc 0.9.5.
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54 // These lists have a specific signature. When a resource does not have
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55 // the metadata "MainDicomTagsSignature", we'll assume that they were stored
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56 // with an Orthanc prior to 1.11. It is therefore very important that you never
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57 // change these lists !
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58
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59 static const DicomTag DEFAULT_PATIENT_MAIN_DICOM_TAGS[] =
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60 {
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61 // { DicomTag(0x0010, 0x1010), "PatientAge" },
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62 // { DicomTag(0x0010, 0x1040), "PatientAddress" },
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63 DICOM_TAG_PATIENT_NAME,
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64 DICOM_TAG_PATIENT_BIRTH_DATE,
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65 DICOM_TAG_PATIENT_SEX,
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66 DICOM_TAG_OTHER_PATIENT_IDS,
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67 DICOM_TAG_PATIENT_ID
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68 };
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69
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70 static const DicomTag DEFAULT_STUDY_MAIN_DICOM_TAGS[] =
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71 {
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72 // { DicomTag(0x0010, 0x1020), "PatientSize" },
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73 // { DicomTag(0x0010, 0x1030), "PatientWeight" },
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74 DICOM_TAG_STUDY_DATE,
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75 DICOM_TAG_STUDY_TIME,
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76 DICOM_TAG_STUDY_ID,
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77 DICOM_TAG_STUDY_DESCRIPTION,
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78 DICOM_TAG_ACCESSION_NUMBER,
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79 DICOM_TAG_STUDY_INSTANCE_UID,
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80
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81 // New in db v6 (Orthanc 0.9.5)
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82 DICOM_TAG_REQUESTED_PROCEDURE_DESCRIPTION,
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83 DICOM_TAG_INSTITUTION_NAME,
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84 DICOM_TAG_REQUESTING_PHYSICIAN,
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85 DICOM_TAG_REFERRING_PHYSICIAN_NAME
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86 };
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87
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88 static const DicomTag DEFAULT_SERIES_MAIN_DICOM_TAGS[] =
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89 {
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90 // { DicomTag(0x0010, 0x1080), "MilitaryRank" },
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91 DICOM_TAG_SERIES_DATE,
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92 DICOM_TAG_SERIES_TIME,
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93 DICOM_TAG_MODALITY,
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94 DICOM_TAG_MANUFACTURER,
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95 DICOM_TAG_STATION_NAME,
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96 DICOM_TAG_SERIES_DESCRIPTION,
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97 DICOM_TAG_BODY_PART_EXAMINED,
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98 DICOM_TAG_SEQUENCE_NAME,
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99 DICOM_TAG_PROTOCOL_NAME,
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100 DICOM_TAG_SERIES_NUMBER,
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101 DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES,
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102 DICOM_TAG_IMAGES_IN_ACQUISITION,
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103 DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS,
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104 DICOM_TAG_NUMBER_OF_SLICES,
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105 DICOM_TAG_NUMBER_OF_TIME_SLICES,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
106 DICOM_TAG_SERIES_INSTANCE_UID,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
107
5179
1e406c23b352 added unit test DicomMap.SetupFindTemplates
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5178
diff changeset
108 // New in db v6 (Orthanc 0.9.5)
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
109 DICOM_TAG_IMAGE_ORIENTATION_PATIENT,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
110 DICOM_TAG_SERIES_TYPE,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
111 DICOM_TAG_OPERATOR_NAME,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
112 DICOM_TAG_PERFORMED_PROCEDURE_STEP_DESCRIPTION,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
113 DICOM_TAG_ACQUISITION_DEVICE_PROCESSING_DESCRIPTION,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
114 DICOM_TAG_CONTRAST_BOLUS_AGENT
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
115 };
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
116
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
117 static const DicomTag DEFAULT_INSTANCE_MAIN_DICOM_TAGS[] =
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
118 {
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
119 DICOM_TAG_INSTANCE_CREATION_DATE,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
120 DICOM_TAG_INSTANCE_CREATION_TIME,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
121 DICOM_TAG_ACQUISITION_NUMBER,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
122 DICOM_TAG_IMAGE_INDEX,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
123 DICOM_TAG_INSTANCE_NUMBER,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
124 DICOM_TAG_NUMBER_OF_FRAMES,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
125 DICOM_TAG_TEMPORAL_POSITION_IDENTIFIER,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
126 DICOM_TAG_SOP_INSTANCE_UID,
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
127
5179
1e406c23b352 added unit test DicomMap.SetupFindTemplates
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5178
diff changeset
128 // New in db v6 (Orthanc 0.9.5)
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
129 DICOM_TAG_IMAGE_POSITION_PATIENT,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
130 DICOM_TAG_IMAGE_COMMENTS,
2804
d88970f1ffbf fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
131
d88970f1ffbf fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
132 /**
d88970f1ffbf fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
133 * Main DICOM tags that are not part of any release of the
d88970f1ffbf fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
134 * database schema yet, and that will be part of future db v7. In
d88970f1ffbf fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
135 * the meantime, the user must call "/tools/reconstruct" once to
d88970f1ffbf fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
136 * access these tags if the corresponding DICOM files where
d88970f1ffbf fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
137 * indexed in the database by an older version of Orthanc.
d88970f1ffbf fix ordering of non-parallel slices + /tools/reconstruct
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
138 **/
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
139 DICOM_TAG_IMAGE_ORIENTATION_PATIENT // New in Orthanc 1.4.2
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
140 };
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
141
5178
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5177
diff changeset
142 class DicomMap::MainDicomTagsConfiguration : public boost::noncopyable
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
143 {
4932
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parents: 4870
diff changeset
144 private:
5178
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5177
diff changeset
145 #if !defined(__EMSCRIPTEN__)
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5177
diff changeset
146 typedef boost::unique_lock<boost::shared_mutex> WriterLock;
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5177
diff changeset
147 typedef boost::shared_lock<boost::shared_mutex> ReaderLock;
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5177
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148
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5177
diff changeset
149 boost::shared_mutex mutex_;
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5177
diff changeset
150 #endif
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5177
diff changeset
151
5177
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
152 std::set<DicomTag> patientsMainDicomTagsByLevel_;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
153 std::set<DicomTag> studiesMainDicomTagsByLevel_;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
154 std::set<DicomTag> seriesMainDicomTagsByLevel_;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
155 std::set<DicomTag> instancesMainDicomTagsByLevel_;
4982
40fd2a485a84 fix build for older compilers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4981
diff changeset
156
4932
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Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
157 std::set<DicomTag> allMainDicomTags_;
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
158
4933
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
159 std::map<ResourceType, std::string> signatures_;
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
160 std::map<ResourceType, std::string> defaultSignatures_;
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
161
4932
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
162 MainDicomTagsConfiguration()
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
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parents: 4870
diff changeset
163 {
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
164 ResetDefaultMainDicomTags();
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
165 }
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
166
4933
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
167 std::string ComputeSignature(const std::set<DicomTag>& tags)
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
168 {
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
169 // std::set are sorted by default (which is important for us !)
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
170 std::set<std::string> tagsIds;
4981
d0c34145320c cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4960
diff changeset
171 for (std::set<DicomTag>::const_iterator it = tags.begin(); it != tags.end(); ++it)
4933
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parents: 4932
diff changeset
172 {
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
173 tagsIds.insert(it->Format());
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
174 }
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
175
4935
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4933
diff changeset
176 std::string signatureText = boost::algorithm::join(tagsIds, ";");
4933
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Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
177
4935
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents: 4933
diff changeset
178 return signatureText;
4932
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
179 }
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
180
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
181 void LoadDefaultMainDicomTags(ResourceType level)
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
182 {
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
183 const DicomTag* tags = NULL;
4932
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parents: 4870
diff changeset
184 size_t size;
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parents: 4870
diff changeset
185
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parents: 4870
diff changeset
186 switch (level)
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parents: 4870
diff changeset
187 {
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parents: 4870
diff changeset
188 case ResourceType_Patient:
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parents: 4870
diff changeset
189 tags = DEFAULT_PATIENT_MAIN_DICOM_TAGS;
5040
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parents: 5038
diff changeset
190 size = sizeof(DEFAULT_PATIENT_MAIN_DICOM_TAGS) / sizeof(DicomTag);
4932
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parents: 4870
diff changeset
191 break;
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parents: 4870
diff changeset
192
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
193 case ResourceType_Study:
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parents: 4870
diff changeset
194 tags = DEFAULT_STUDY_MAIN_DICOM_TAGS;
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
195 size = sizeof(DEFAULT_STUDY_MAIN_DICOM_TAGS) / sizeof(DicomTag);
4932
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parents: 4870
diff changeset
196 break;
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
197
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
198 case ResourceType_Series:
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
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parents: 4870
diff changeset
199 tags = DEFAULT_SERIES_MAIN_DICOM_TAGS;
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
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parents: 5038
diff changeset
200 size = sizeof(DEFAULT_SERIES_MAIN_DICOM_TAGS) / sizeof(DicomTag);
4932
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parents: 4870
diff changeset
201 break;
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
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parents: 4870
diff changeset
202
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
203 case ResourceType_Instance:
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
204 tags = DEFAULT_INSTANCE_MAIN_DICOM_TAGS;
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
205 size = sizeof(DEFAULT_INSTANCE_MAIN_DICOM_TAGS) / sizeof(DicomTag);
4932
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
206 break;
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
207
4932
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Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
208 default:
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parents: 4870
diff changeset
209 throw OrthancException(ErrorCode_ParameterOutOfRange);
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Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
210 }
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
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211
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212 assert(tags != NULL &&
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213 size != 0);
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214
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215 for (size_t i = 0; i < size; i++)
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216 {
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217 AddMainDicomTagInternal(tags[i], level);
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218 }
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219 }
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220
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221 std::set<DicomTag>& GetMainDicomTagsByLevelInternal(ResourceType level)
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222 {
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223 switch (level)
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224 {
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225 case ResourceType_Patient:
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226 return patientsMainDicomTagsByLevel_;
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227
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228 case ResourceType_Study:
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229 return studiesMainDicomTagsByLevel_;
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230
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231 case ResourceType_Series:
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232 return seriesMainDicomTagsByLevel_;
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233
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234 case ResourceType_Instance:
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235 return instancesMainDicomTagsByLevel_;
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236
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237 default:
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238 throw OrthancException(ErrorCode_InternalError);
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239 }
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240 }
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241
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242 void AddMainDicomTagInternal(const DicomTag& tag,
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243 ResourceType level)
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244 {
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245 std::set<DicomTag>& existingLevelTags = GetMainDicomTagsByLevelInternal(level);
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246
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247 if (existingLevelTags.find(tag) != existingLevelTags.end())
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248 {
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249 throw OrthancException(ErrorCode_MainDicomTagsMultiplyDefined, tag.Format() + " is already defined");
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250 }
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251
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252 existingLevelTags.insert(tag);
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253 allMainDicomTags_.insert(tag);
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254
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255 signatures_[level] = ComputeSignature(GetMainDicomTagsByLevelInternal(level));
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256 }
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257
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258 public:
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259 // Singleton pattern
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260 static MainDicomTagsConfiguration& GetInstance()
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261 {
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262 static MainDicomTagsConfiguration parameters;
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263 return parameters;
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264 }
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265
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266 void ResetDefaultMainDicomTags()
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267 {
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268 #if !defined(__EMSCRIPTEN__)
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269 WriterLock lock(mutex_);
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270 #endif
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271
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272 patientsMainDicomTagsByLevel_.clear();
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273 studiesMainDicomTagsByLevel_.clear();
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274 seriesMainDicomTagsByLevel_.clear();
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275 instancesMainDicomTagsByLevel_.clear();
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276
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277 allMainDicomTags_.clear();
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278
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279 // by default, initialize with the previous static list (up to 1.10.0)
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280 LoadDefaultMainDicomTags(ResourceType_Patient);
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281 LoadDefaultMainDicomTags(ResourceType_Study);
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282 LoadDefaultMainDicomTags(ResourceType_Series);
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283 LoadDefaultMainDicomTags(ResourceType_Instance);
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284
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285 defaultSignatures_[ResourceType_Patient] = signatures_[ResourceType_Patient];
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286 defaultSignatures_[ResourceType_Study] = signatures_[ResourceType_Study];
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287 defaultSignatures_[ResourceType_Series] = signatures_[ResourceType_Series];
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288 defaultSignatures_[ResourceType_Instance] = signatures_[ResourceType_Instance];
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289 }
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290
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291 void AddMainDicomTag(const DicomTag& tag,
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292 ResourceType level)
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293 {
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294 #if !defined(__EMSCRIPTEN__)
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295 WriterLock lock(mutex_);
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296 #endif
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297
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298 AddMainDicomTagInternal(tag, level);
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299 }
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300
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301 void GetAllMainDicomTags(std::set<DicomTag>& target)
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302 {
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303 #if !defined(__EMSCRIPTEN__)
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304 ReaderLock lock(mutex_);
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305 #endif
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306
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307 target = allMainDicomTags_;
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308 }
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309
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310 void GetMainDicomTagsByLevel(std::set<DicomTag>& target,
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311 ResourceType level)
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312 {
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313 #if !defined(__EMSCRIPTEN__)
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314 ReaderLock lock(mutex_);
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315 #endif
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316
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317 target = GetMainDicomTagsByLevelInternal(level);
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318 }
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319
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320 std::string GetMainDicomTagsSignature(ResourceType level)
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321 {
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322 #if !defined(__EMSCRIPTEN__)
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323 ReaderLock lock(mutex_);
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324 #endif
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325
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326 assert(signatures_.find(level) != signatures_.end());
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327 return signatures_[level];
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328 }
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329
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330 std::string GetDefaultMainDicomTagsSignature(ResourceType level)
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331 {
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332 #if !defined(__EMSCRIPTEN__)
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333 ReaderLock lock(mutex_);
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334 #endif
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335
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336 assert(defaultSignatures_.find(level) != defaultSignatures_.end());
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337 return defaultSignatures_[level];
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338 }
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339
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340 bool IsMainDicomTag(const DicomTag& tag)
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341 {
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342 #if !defined(__EMSCRIPTEN__)
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343 ReaderLock lock(mutex_);
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344 #endif
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345
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parents: 5176
diff changeset
346 return allMainDicomTags_.find(tag) != allMainDicomTags_.end();
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diff changeset
347 }
5175
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diff changeset
348
5177
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diff changeset
349 bool IsMainDicomTag(const DicomTag& tag,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
350 ResourceType level)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
351 {
5178
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
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parents: 5177
diff changeset
352 #if !defined(__EMSCRIPTEN__)
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
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parents: 5177
diff changeset
353 ReaderLock lock(mutex_);
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
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parents: 5177
diff changeset
354 #endif
02c7e4aa7946 internal class DicomMap::MainDicomTagsConfiguration is now thread-safe
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parents: 5177
diff changeset
355
5177
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diff changeset
356 const std::set<DicomTag>& mainDicomTags = GetMainDicomTagsByLevelInternal(level);
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
357 return mainDicomTags.find(tag) != mainDicomTags.end();
5175
48005e522bd6 start fixing thread safety issues with DicomMap
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parents: 5050
diff changeset
358 }
4932
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parents: 4870
diff changeset
359 };
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46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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diff changeset
360
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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parents: 3650
diff changeset
361
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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parents: 3650
diff changeset
362 void DicomMap::SetValueInternal(uint16_t group,
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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parents: 3650
diff changeset
363 uint16_t element,
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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diff changeset
364 DicomValue* value)
0
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365 {
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366 DicomTag tag(group, element);
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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diff changeset
367 Content::iterator it = content_.find(tag);
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368
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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parents: 3650
diff changeset
369 if (it != content_.end())
0
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diff changeset
370 {
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parents:
diff changeset
371 delete it->second;
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diff changeset
372 it->second = value;
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parents:
diff changeset
373 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
374 else
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diff changeset
375 {
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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diff changeset
376 content_.insert(std::make_pair(tag, value));
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377 }
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parents:
diff changeset
378 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
379
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
380
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parents:
diff changeset
381 void DicomMap::Clear()
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382 {
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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parents: 3650
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383 for (Content::iterator it = content_.begin(); it != content_.end(); ++it)
0
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diff changeset
384 {
2863
da12ba232119 serialization of DicomMap
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parents: 2804
diff changeset
385 assert(it->second != NULL);
0
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386 delete it->second;
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parents:
diff changeset
387 }
3959d33612cc initial commit
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parents:
diff changeset
388
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
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diff changeset
389 content_.clear();
0
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parents:
diff changeset
390 }
3959d33612cc initial commit
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parents:
diff changeset
391
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3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
392 void DicomMap::SetNullValue(uint16_t group, uint16_t element)
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
393 {
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
394 SetValueInternal(group, element, new DicomValue);
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
395 }
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
396
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
397 void DicomMap::SetNullValue(const DicomTag &tag)
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
398 {
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
399 SetValueInternal(tag.GetGroup(), tag.GetElement(), new DicomValue);
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
400 }
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
401
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
402 void DicomMap::SetValue(uint16_t group, uint16_t element, const DicomValue &value)
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
403 {
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
404 SetValueInternal(group, element, value.Clone());
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
405 }
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
406
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
407 void DicomMap::SetValue(const DicomTag &tag, const DicomValue &value)
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
408 {
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
409 SetValueInternal(tag.GetGroup(), tag.GetElement(), value.Clone());
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
410 }
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
411
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
412 void DicomMap::SetValue(const DicomTag &tag, const std::string &str, bool isBinary)
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
413 {
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
414 SetValueInternal(tag.GetGroup(), tag.GetElement(), new DicomValue(str, isBinary));
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
415 }
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
416
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
417 void DicomMap::SetValue(uint16_t group, uint16_t element, const std::string &str, bool isBinary)
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
418 {
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
419 SetValueInternal(group, element, new DicomValue(str, isBinary));
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
420 }
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
421
5323
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
422 void DicomMap::SetSequenceValue(const DicomTag& tag, const Json::Value& value)
5044
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
423 {
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parents: 5040
diff changeset
424 SetValueInternal(tag.GetGroup(), tag.GetElement(), new DicomValue(value));
6fed78e13233 Refactored DicomMap to handle sequences when needed
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parents: 5040
diff changeset
425 }
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parents: 5040
diff changeset
426
4296
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
427 bool DicomMap::HasTag(uint16_t group, uint16_t element) const
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
428 {
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
429 return HasTag(DicomTag(group, element));
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
430 }
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
431
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
432 bool DicomMap::HasTag(const DicomTag &tag) const
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
433 {
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parents: 4214
diff changeset
434 return content_.find(tag) != content_.end();
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
435 }
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
436
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parents: 4214
diff changeset
437 const DicomValue &DicomMap::GetValue(uint16_t group, uint16_t element) const
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
438 {
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
439 return GetValue(DicomTag(group, element));
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
440 }
3b70a2e6a06c moving inline methods to source files for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4214
diff changeset
441
0
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
442
4936
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
443 static void ExtractTagsInternal(DicomMap& result,
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
444 const DicomMap::Content& source,
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
445 const std::set<DicomTag>& mainDicomTags)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
446 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
447 result.Clear();
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
448
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
449 for (std::set<DicomTag>::const_iterator itmt = mainDicomTags.begin();
4981
d0c34145320c cppcheck
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parents: 4960
diff changeset
450 itmt != mainDicomTags.end(); ++itmt)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
451 {
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
452 DicomMap::Content::const_iterator it = source.find(*itmt);
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
453 if (it != source.end())
0
3959d33612cc initial commit
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parents:
diff changeset
454 {
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
455 result.SetValue(it->first, *it->second /* value will be cloned */);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
456 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
457 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
458 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
459
4936
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
460 void DicomMap::ExtractTags(DicomMap& result, const std::set<DicomTag>& tags) const
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
461 {
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
462 result.Clear();
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
463
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
464 for (std::set<DicomTag>::const_iterator itmt = tags.begin();
4981
d0c34145320c cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4960
diff changeset
465 itmt != tags.end(); ++itmt)
4936
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
466 {
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
467 DicomMap::Content::const_iterator it = content_.find(*itmt);
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
468 if (it != content_.end())
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
469 {
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
470 result.SetValue(it->first, *it->second /* value will be cloned */);
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
471 }
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Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
472 }
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
473 }
8422e4f99a18 Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4935
diff changeset
474
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parents: 4933
diff changeset
475 void DicomMap::ExtractResourceInformation(DicomMap& result, ResourceType level) const
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parents: 4933
diff changeset
476 {
5177
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477 std::set<DicomTag> mainDicomTags;
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parents: 5176
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478 DicomMap::MainDicomTagsConfiguration::GetInstance().GetMainDicomTagsByLevel(mainDicomTags, level);
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parents: 4935
diff changeset
479 ExtractTagsInternal(result, content_, mainDicomTags);
4935
acd3f72e2a21 split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
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parents: 4933
diff changeset
480 }
0
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parents:
diff changeset
481
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parents:
diff changeset
482 void DicomMap::ExtractPatientInformation(DicomMap& result) const
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parents:
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483 {
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parents: 4933
diff changeset
484 ExtractResourceInformation(result, ResourceType_Patient);
0
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parents:
diff changeset
485 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
486
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parents:
diff changeset
487 void DicomMap::ExtractStudyInformation(DicomMap& result) const
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parents:
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488 {
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parents: 4933
diff changeset
489 ExtractResourceInformation(result, ResourceType_Study);
0
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parents:
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490 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
491
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parents:
diff changeset
492 void DicomMap::ExtractSeriesInformation(DicomMap& result) const
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parents:
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493 {
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parents: 4933
diff changeset
494 ExtractResourceInformation(result, ResourceType_Series);
0
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parents:
diff changeset
495 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
496
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
497 void DicomMap::ExtractInstanceInformation(DicomMap& result) const
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parents:
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498 {
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parents: 4933
diff changeset
499 ExtractResourceInformation(result, ResourceType_Instance);
0
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parents:
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500 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
501
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
502
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parents: 4296
diff changeset
503 DicomMap::~DicomMap()
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parents: 4214
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504 {
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
505 Clear();
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parents: 4214
diff changeset
506 }
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parents: 4214
diff changeset
507
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parents: 4214
diff changeset
508 size_t DicomMap::GetSize() const
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parents: 4214
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509 {
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parents: 4214
diff changeset
510 return content_.size();
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
511 }
3b70a2e6a06c moving inline methods to source files for ABI compatibility
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parents: 4214
diff changeset
512
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parents: 77
diff changeset
513
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
514 DicomMap* DicomMap::Clone() const
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parents:
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515 {
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parents: 3690
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516 std::unique_ptr<DicomMap> result(new DicomMap);
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517
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parents: 3650
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518 for (Content::const_iterator it = content_.begin(); it != content_.end(); ++it)
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parents:
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519 {
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parents: 3650
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520 result->content_.insert(std::make_pair(it->first, it->second->Clone()));
0
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parents:
diff changeset
521 }
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parents:
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522
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parents:
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523 return result.release();
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
524 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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525
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parents:
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526
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527 void DicomMap::Assign(const DicomMap& other)
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528 {
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parents: 1288
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529 Clear();
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parents: 1288
diff changeset
530
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parents: 3650
diff changeset
531 for (Content::const_iterator it = other.content_.begin(); it != other.content_.end(); ++it)
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parents: 1288
diff changeset
532 {
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parents: 3650
diff changeset
533 content_.insert(std::make_pair(it->first, it->second->Clone()));
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parents: 1288
diff changeset
534 }
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parents: 1288
diff changeset
535 }
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parents: 1288
diff changeset
536
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parents: 1288
diff changeset
537
0
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parents:
diff changeset
538 const DicomValue& DicomMap::GetValue(const DicomTag& tag) const
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parents:
diff changeset
539 {
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540 const DicomValue* value = TestAndGetValue(tag);
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541
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parents: 77
diff changeset
542 if (value)
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parents: 77
diff changeset
543 {
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parents: 77
diff changeset
544 return *value;
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parents: 77
diff changeset
545 }
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parents: 77
diff changeset
546 else
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parents: 77
diff changeset
547 {
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309e686b41e7 better logging about nonexistent tags
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parents: 689
diff changeset
548 throw OrthancException(ErrorCode_InexistentTag);
80
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parents: 77
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549 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
550 }
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parents: 77
diff changeset
551
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552 const DicomValue *DicomMap::TestAndGetValue(uint16_t group, uint16_t element) const
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parents: 4214
diff changeset
553 {
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diff changeset
554 return TestAndGetValue(DicomTag(group, element));
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parents: 4214
diff changeset
555 }
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parents: 4214
diff changeset
556
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diff changeset
557
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parents: 77
diff changeset
558 const DicomValue* DicomMap::TestAndGetValue(const DicomTag& tag) const
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parents: 77
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559 {
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diff changeset
560 Content::const_iterator it = content_.find(tag);
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561
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parents: 3650
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562 if (it == content_.end())
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parents:
diff changeset
563 {
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parents: 77
diff changeset
564 return NULL;
0
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parents:
diff changeset
565 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
566 else
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parents:
diff changeset
567 {
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parents: 77
diff changeset
568 return it->second;
0
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parents:
diff changeset
569 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
570 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
571
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
572
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
573 void DicomMap::Remove(const DicomTag& tag)
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parents:
diff changeset
574 {
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diff changeset
575 Content::iterator it = content_.find(tag);
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parents: 3650
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576 if (it != content_.end())
0
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parents:
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577 {
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parents:
diff changeset
578 delete it->second;
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parents: 3650
diff changeset
579 content_.erase(it);
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parents:
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580 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
581 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
582
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diff changeset
583 void DicomMap::RemoveTags(const std::set<DicomTag>& tags)
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diff changeset
584 {
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parents: 4982
diff changeset
585 for (std::set<DicomTag>::const_iterator it = tags.begin(); it != tags.end(); ++it)
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parents: 4982
diff changeset
586 {
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diff changeset
587 Remove(*it);
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parents: 4982
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588 }
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Alain Mazy <am@osimis.io>
parents: 4982
diff changeset
589 }
0
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parents:
diff changeset
590
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parents: 5179
diff changeset
591 void DicomMap::SetupFindPatientTemplate(DicomMap& result)
0
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592 {
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593 result.Clear();
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parents:
diff changeset
594
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parents: 5179
diff changeset
595 // Identifying tags
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parents: 5179
diff changeset
596 result.SetValue(DICOM_TAG_PATIENT_ID, "", false);
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parents:
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597
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d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
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parents: 5179
diff changeset
598 // Other tags in the "Patient" module
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
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parents: 5179
diff changeset
599 result.SetValue(DICOM_TAG_OTHER_PATIENT_IDS, "", false);
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parents: 5179
diff changeset
600 result.SetValue(DICOM_TAG_PATIENT_BIRTH_DATE, "", false);
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parents: 5179
diff changeset
601 result.SetValue(DICOM_TAG_PATIENT_NAME, "", false);
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parents: 5179
diff changeset
602 result.SetValue(DICOM_TAG_PATIENT_SEX, "", false);
0
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
603 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
604
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
605 void DicomMap::SetupFindStudyTemplate(DicomMap& result)
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parents:
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606 {
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parents: 5179
diff changeset
607 result.Clear();
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
608
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
609 // Identifying tags
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
610 result.SetValue(DICOM_TAG_PATIENT_ID, "", false);
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
611 result.SetValue(DICOM_TAG_ACCESSION_NUMBER, "", false);
5180
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
612 result.SetValue(DICOM_TAG_STUDY_INSTANCE_UID, "", false);
1848
e39716f71d67 new main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1841
diff changeset
613
5180
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
614 // Other tags in the "General Study" module
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
615 result.SetValue(DICOM_TAG_REFERRING_PHYSICIAN_NAME, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
616 result.SetValue(DICOM_TAG_STUDY_DATE, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
617 result.SetValue(DICOM_TAG_STUDY_DESCRIPTION, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
618 result.SetValue(DICOM_TAG_STUDY_ID, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
619 result.SetValue(DICOM_TAG_STUDY_TIME, "", false);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
620 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
621
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
622 void DicomMap::SetupFindSeriesTemplate(DicomMap& result)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
623 {
5180
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
624 result.Clear();
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
625
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
626 // Identifying tags
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
627 result.SetValue(DICOM_TAG_PATIENT_ID, "", false);
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
628 result.SetValue(DICOM_TAG_ACCESSION_NUMBER, "", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
629 result.SetValue(DICOM_TAG_STUDY_INSTANCE_UID, "", false);
5180
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
630 result.SetValue(DICOM_TAG_SERIES_INSTANCE_UID, "", false);
1372
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1364
diff changeset
631
5180
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
632 // Other tags in the "General Series" module
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
633 result.SetValue(DICOM_TAG_BODY_PART_EXAMINED, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
634 result.SetValue(DICOM_TAG_MODALITY, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
635 result.SetValue(DICOM_TAG_OPERATOR_NAME, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
636 result.SetValue(DICOM_TAG_PERFORMED_PROCEDURE_STEP_DESCRIPTION, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
637 result.SetValue(DICOM_TAG_PROTOCOL_NAME, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
638 result.SetValue(DICOM_TAG_SERIES_DATE, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
639 result.SetValue(DICOM_TAG_SERIES_DESCRIPTION, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
640 result.SetValue(DICOM_TAG_SERIES_NUMBER, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
641 result.SetValue(DICOM_TAG_SERIES_TIME, "", false);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
642 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
643
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
644 void DicomMap::SetupFindInstanceTemplate(DicomMap& result)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
645 {
5180
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
646 result.Clear();
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
647
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
648 // Identifying tags
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
649 result.SetValue(DICOM_TAG_PATIENT_ID, "", false);
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
650 result.SetValue(DICOM_TAG_ACCESSION_NUMBER, "", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
651 result.SetValue(DICOM_TAG_STUDY_INSTANCE_UID, "", false);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
652 result.SetValue(DICOM_TAG_SERIES_INSTANCE_UID, "", false);
5180
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
653 result.SetValue(DICOM_TAG_SOP_INSTANCE_UID, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
654
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
655 // Other tags in the "SOP Common" module
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
656 result.SetValue(DICOM_TAG_ACQUISITION_NUMBER, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
657 result.SetValue(DICOM_TAG_IMAGE_COMMENTS, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
658 result.SetValue(DICOM_TAG_IMAGE_INDEX, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
659 result.SetValue(DICOM_TAG_IMAGE_ORIENTATION_PATIENT, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
660 result.SetValue(DICOM_TAG_IMAGE_POSITION_PATIENT, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
661 result.SetValue(DICOM_TAG_INSTANCE_CREATION_DATE, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
662 result.SetValue(DICOM_TAG_INSTANCE_CREATION_TIME, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
663 result.SetValue(DICOM_TAG_INSTANCE_NUMBER, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
664 result.SetValue(DICOM_TAG_NUMBER_OF_FRAMES, "", false);
d2626a062809 fix DicomMap::SetupFindXXXTemplate() methods
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5179
diff changeset
665 result.SetValue(DICOM_TAG_TEMPORAL_POSITION_IDENTIFIER, "", false);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
666 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
667
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
668
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
669 void DicomMap::CopyTagIfExists(const DicomMap& source,
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
670 const DicomTag& tag)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
671 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
672 if (source.HasTag(tag))
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
673 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
674 SetValue(tag, source.GetValue(tag));
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
675 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
676 }
562
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
677
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
678
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
679 bool DicomMap::IsMainDicomTag(const DicomTag& tag, ResourceType level)
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
680 {
5177
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parents: 5176
diff changeset
681 return DicomMap::MainDicomTagsConfiguration::GetInstance().IsMainDicomTag(tag, level);
562
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
682 }
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
683
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
684 bool DicomMap::IsMainDicomTag(const DicomTag& tag)
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
685 {
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
686 return (IsMainDicomTag(tag, ResourceType_Patient) ||
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
687 IsMainDicomTag(tag, ResourceType_Study) ||
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
688 IsMainDicomTag(tag, ResourceType_Series) ||
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
689 IsMainDicomTag(tag, ResourceType_Instance));
f64e3838d6e1 refactoring enumerations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
690 }
567
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 562
diff changeset
691
4944
f377d5643538 new Warnings configuration + InstanceAvailability tag
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parents: 4940
diff changeset
692 static bool IsGenericComputedTag(const DicomTag& tag)
f377d5643538 new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents: 4940
diff changeset
693 {
f377d5643538 new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents: 4940
diff changeset
694 return tag == DICOM_TAG_RETRIEVE_URL ||
f377d5643538 new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents: 4940
diff changeset
695 tag == DICOM_TAG_RETRIEVE_AE_TITLE;
f377d5643538 new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents: 4940
diff changeset
696 }
f377d5643538 new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents: 4940
diff changeset
697
4940
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
698 bool DicomMap::IsComputedTag(const DicomTag& tag)
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
699 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
700 return (IsComputedTag(tag, ResourceType_Patient) ||
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
701 IsComputedTag(tag, ResourceType_Study) ||
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
702 IsComputedTag(tag, ResourceType_Series) ||
4944
f377d5643538 new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents: 4940
diff changeset
703 IsComputedTag(tag, ResourceType_Instance) ||
f377d5643538 new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents: 4940
diff changeset
704 IsGenericComputedTag(tag));
4940
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
705 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
706
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
707 bool DicomMap::IsComputedTag(const DicomTag& tag, ResourceType level)
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
708 {
4944
f377d5643538 new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents: 4940
diff changeset
709
4940
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
710 switch (level)
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
711 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
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parents: 4936
diff changeset
712 case ResourceType_Patient:
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
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parents: 4936
diff changeset
713 return (
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
714 tag == DICOM_TAG_NUMBER_OF_PATIENT_RELATED_STUDIES ||
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
715 tag == DICOM_TAG_NUMBER_OF_PATIENT_RELATED_SERIES ||
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
716 tag == DICOM_TAG_NUMBER_OF_PATIENT_RELATED_INSTANCES
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
717 );
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
718 case ResourceType_Study:
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
719 return (
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
720 tag == DICOM_TAG_MODALITIES_IN_STUDY ||
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parents: 4936
diff changeset
721 tag == DICOM_TAG_SOP_CLASSES_IN_STUDY ||
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
722 tag == DICOM_TAG_NUMBER_OF_STUDY_RELATED_INSTANCES ||
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
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parents: 4936
diff changeset
723 tag == DICOM_TAG_NUMBER_OF_STUDY_RELATED_SERIES
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
724 );
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
725 case ResourceType_Series:
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
726 return (
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
727 tag == DICOM_TAG_NUMBER_OF_SERIES_RELATED_INSTANCES
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
728 );
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
729 case ResourceType_Instance:
4944
f377d5643538 new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents: 4940
diff changeset
730 return (
f377d5643538 new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents: 4940
diff changeset
731 tag == DICOM_TAG_INSTANCE_AVAILABILITY
f377d5643538 new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents: 4940
diff changeset
732 );
4940
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
733 default:
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
734 throw OrthancException(ErrorCode_ParameterOutOfRange);
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
735 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
736 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
737
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
738 bool DicomMap::HasOnlyComputedTags(const std::set<DicomTag>& tags)
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
739 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
740 if (tags.size() == 0)
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
741 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
742 return false;
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
743 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
744
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
745 for (std::set<DicomTag>::const_iterator it = tags.begin(); it != tags.end(); ++it)
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
746 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
747 if (!IsComputedTag(*it))
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
748 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
749 return false;
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
750 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
751 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
752 return true;
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
753 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
754
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
755 bool DicomMap::HasComputedTags(const std::set<DicomTag>& tags)
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
756 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
757 for (std::set<DicomTag>::const_iterator it = tags.begin(); it != tags.end(); ++it)
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
758 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
759 if (IsComputedTag(*it))
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
760 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
761 return true;
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
762 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
763 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
764
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
765 return false;
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
766 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
767
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
768 bool DicomMap::HasComputedTags(const std::set<DicomTag>& tags, ResourceType level)
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
769 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
770 for (std::set<DicomTag>::const_iterator it = tags.begin(); it != tags.end(); ++it)
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
771 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
772 if (IsComputedTag(*it, level))
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
773 {
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
774 return true;
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
775 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
776 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
777 return false;
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
778 }
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
779
304514ce84ee tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents: 4936
diff changeset
780
5175
48005e522bd6 start fixing thread safety issues with DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5050
diff changeset
781 void DicomMap::GetMainDicomTags(std::set<DicomTag>& target,
48005e522bd6 start fixing thread safety issues with DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5050
diff changeset
782 ResourceType level)
567
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 562
diff changeset
783 {
5177
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
784 DicomMap::MainDicomTagsConfiguration::GetInstance().GetMainDicomTagsByLevel(target, level);
4932
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
785 }
567
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 562
diff changeset
786
5176
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5175
diff changeset
787 void DicomMap::GetAllMainDicomTags(std::set<DicomTag>& target)
4932
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
788 {
5177
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
789 DicomMap::MainDicomTagsConfiguration::GetInstance().GetAllMainDicomTags(target);
567
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 562
diff changeset
790 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 562
diff changeset
791
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
792 void DicomMap::AddMainDicomTag(const DicomTag& tag, ResourceType level)
567
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 562
diff changeset
793 {
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
794 DicomMap::MainDicomTagsConfiguration::GetInstance().AddMainDicomTag(tag, level);
567
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 562
diff changeset
795 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 562
diff changeset
796
4932
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
797 void DicomMap::ResetDefaultMainDicomTags()
567
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 562
diff changeset
798 {
4932
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
799 DicomMap::MainDicomTagsConfiguration::GetInstance().ResetDefaultMainDicomTags();
567
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 562
diff changeset
800 }
1206
f5b0207967bc Fix issue 19 (YBR_FULL are decoded incorrectly)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 824
diff changeset
801
5176
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5175
diff changeset
802 std::string DicomMap::GetMainDicomTagsSignature(ResourceType level)
4933
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
803 {
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
804 return DicomMap::MainDicomTagsConfiguration::GetInstance().GetMainDicomTagsSignature(level);
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
805 }
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
806
5176
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5175
diff changeset
807 std::string DicomMap::GetDefaultMainDicomTagsSignature(ResourceType level)
4933
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
808 {
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
809 return DicomMap::MainDicomTagsConfiguration::GetInstance().GetDefaultMainDicomTagsSignature(level);
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
810 }
312c6f4da888 adding MainDicomTags signatures
Alain Mazy <am@osimis.io>
parents: 4932
diff changeset
811
1360
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1310
diff changeset
812 void DicomMap::GetTags(std::set<DicomTag>& tags) const
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1310
diff changeset
813 {
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1310
diff changeset
814 tags.clear();
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1310
diff changeset
815
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
816 for (Content::const_iterator it = content_.begin();
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
817 it != content_.end(); ++it)
1360
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1310
diff changeset
818 {
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1310
diff changeset
819 tags.insert(it->first);
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1310
diff changeset
820 }
0649c5aef34a DicomFindQuery
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1310
diff changeset
821 }
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
822
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
823
4213
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
824 static uint16_t ReadLittleEndianUint16(const char* dicom)
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
825 {
4213
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
826 const uint8_t* p = reinterpret_cast<const uint8_t*>(dicom);
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
827
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
828 return (static_cast<uint16_t>(p[0]) |
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
829 (static_cast<uint16_t>(p[1]) << 8));
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
830 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
831
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
832
4213
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
833 static uint32_t ReadLittleEndianUint32(const char* dicom)
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
834 {
4213
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
835 const uint8_t* p = reinterpret_cast<const uint8_t*>(dicom);
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
836
4214
7b011cfda135 working on DicomStreamReader
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4213
diff changeset
837 return (static_cast<uint32_t>(p[0]) |
7b011cfda135 working on DicomStreamReader
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4213
diff changeset
838 (static_cast<uint32_t>(p[1]) << 8) |
7b011cfda135 working on DicomStreamReader
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4213
diff changeset
839 (static_cast<uint32_t>(p[2]) << 16) |
7b011cfda135 working on DicomStreamReader
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4213
diff changeset
840 (static_cast<uint32_t>(p[3]) << 24));
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
841 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
842
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
843
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
844 static bool ValidateTag(const ValueRepresentation& vr,
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
845 const std::string& value)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
846 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
847 switch (vr)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
848 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
849 case ValueRepresentation_ApplicationEntity:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
850 return value.size() <= 16;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
851
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
852 case ValueRepresentation_AgeString:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
853 return (value.size() == 4 &&
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
854 isdigit(value[0]) &&
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
855 isdigit(value[1]) &&
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
856 isdigit(value[2]) &&
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
857 (value[3] == 'D' || value[3] == 'W' || value[3] == 'M' || value[3] == 'Y'));
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
858
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
859 case ValueRepresentation_AttributeTag:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
860 return value.size() == 4;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
861
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
862 case ValueRepresentation_CodeString:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
863 return value.size() <= 16;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
864
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
865 case ValueRepresentation_Date:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
866 return value.size() <= 18;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
867
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
868 case ValueRepresentation_DecimalString:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
869 return value.size() <= 16;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
870
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
871 case ValueRepresentation_DateTime:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
872 return value.size() <= 54;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
873
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
874 case ValueRepresentation_FloatingPointSingle:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
875 return value.size() == 4;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
876
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
877 case ValueRepresentation_FloatingPointDouble:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
878 return value.size() == 8;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
879
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
880 case ValueRepresentation_IntegerString:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
881 return value.size() <= 12;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
882
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
883 case ValueRepresentation_LongString:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
884 return value.size() <= 64;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
885
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
886 case ValueRepresentation_LongText:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
887 return value.size() <= 10240;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
888
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
889 case ValueRepresentation_OtherByte:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
890 return true;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
891
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
892 case ValueRepresentation_OtherDouble:
2013
f6e68c0c2737 fix for msvc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2008
diff changeset
893 return value.size() <= (static_cast<uint64_t>(1) << 32) - 8;
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
894
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
895 case ValueRepresentation_OtherFloat:
2013
f6e68c0c2737 fix for msvc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2008
diff changeset
896 return value.size() <= (static_cast<uint64_t>(1) << 32) - 4;
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
897
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
898 case ValueRepresentation_OtherLong:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
899 return true;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
900
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
901 case ValueRepresentation_OtherWord:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
902 return true;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
903
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
904 case ValueRepresentation_PersonName:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
905 return true;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
906
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
907 case ValueRepresentation_ShortString:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
908 return value.size() <= 16;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
909
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
910 case ValueRepresentation_SignedLong:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
911 return value.size() == 4;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
912
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
913 case ValueRepresentation_Sequence:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
914 return true;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
915
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
916 case ValueRepresentation_SignedShort:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
917 return value.size() == 2;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
918
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
919 case ValueRepresentation_ShortText:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
920 return value.size() <= 1024;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
921
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
922 case ValueRepresentation_Time:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
923 return value.size() <= 28;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
924
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
925 case ValueRepresentation_UnlimitedCharacters:
2013
f6e68c0c2737 fix for msvc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2008
diff changeset
926 return value.size() <= (static_cast<uint64_t>(1) << 32) - 2;
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
927
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
928 case ValueRepresentation_UniqueIdentifier:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
929 return value.size() <= 64;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
930
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
931 case ValueRepresentation_UnsignedLong:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
932 return value.size() == 4;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
933
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
934 case ValueRepresentation_Unknown:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
935 return true;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
936
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
937 case ValueRepresentation_UniversalResource:
2013
f6e68c0c2737 fix for msvc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2008
diff changeset
938 return value.size() <= (static_cast<uint64_t>(1) << 32) - 2;
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
939
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
940 case ValueRepresentation_UnsignedShort:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
941 return value.size() == 2;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
942
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
943 case ValueRepresentation_UnlimitedText:
2013
f6e68c0c2737 fix for msvc
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2008
diff changeset
944 return value.size() <= (static_cast<uint64_t>(1) << 32) - 2;
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
945
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
946 default:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
947 // Assume unsupported tags are OK
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
948 return true;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
949 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
950 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
951
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
952
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
953 static void RemoveTagPadding(std::string& value,
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
954 const ValueRepresentation& vr)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
955 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
956 /**
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
957 * Remove padding from character strings, if need be. For the time
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
958 * being, only the UI VR is supported.
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
959 * http://dicom.nema.org/medical/dicom/current/output/chtml/part05/sect_6.2.html
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
960 **/
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
961
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
962 switch (vr)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
963 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
964 case ValueRepresentation_UniqueIdentifier:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
965 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
966 /**
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
967 * "Values with a VR of UI shall be padded with a single
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
968 * trailing NULL (00H) character when necessary to achieve even
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
969 * length."
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
970 **/
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
971
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
972 if (!value.empty() &&
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
973 value[value.size() - 1] == '\0')
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
974 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
975 value.resize(value.size() - 1);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
976 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
977
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
978 break;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
979 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
980
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
981 /**
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
982 * TODO implement other VR
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
983 **/
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
984
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
985 default:
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
986 // No padding is applicable to this VR
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
987 break;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
988 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
989 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
990
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
991
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
992 static bool ReadNextTag(DicomTag& tag,
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
993 ValueRepresentation& vr,
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
994 std::string& value,
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
995 const char* dicom,
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
996 size_t size,
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
997 size_t& position)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
998 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
999 /**
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1000 * http://dicom.nema.org/medical/dicom/current/output/chtml/part05/chapter_7.html#sect_7.1.2
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1001 * This function reads a data element with Explicit VR encoded using Little-Endian.
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1002 **/
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1003
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1004 if (position + 6 > size)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1005 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1006 return false;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1007 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1008
4213
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1009 tag = DicomTag(ReadLittleEndianUint16(dicom + position),
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1010 ReadLittleEndianUint16(dicom + position + 2));
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1011
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1012 vr = StringToValueRepresentation(std::string(dicom + position + 4, 2), true);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1013 if (vr == ValueRepresentation_NotSupported)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1014 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1015 return false;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1016 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1017
4213
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1018 // http://dicom.nema.org/medical/dicom/current/output/chtml/part05/chapter_7.html#sect_7.1.2
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1019 if (vr == ValueRepresentation_ApplicationEntity /* AE */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1020 vr == ValueRepresentation_AgeString /* AS */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1021 vr == ValueRepresentation_AttributeTag /* AT */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1022 vr == ValueRepresentation_CodeString /* CS */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1023 vr == ValueRepresentation_Date /* DA */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1024 vr == ValueRepresentation_DecimalString /* DS */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1025 vr == ValueRepresentation_DateTime /* DT */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1026 vr == ValueRepresentation_FloatingPointSingle /* FL */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1027 vr == ValueRepresentation_FloatingPointDouble /* FD */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1028 vr == ValueRepresentation_IntegerString /* IS */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1029 vr == ValueRepresentation_LongString /* LO */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1030 vr == ValueRepresentation_LongText /* LT */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1031 vr == ValueRepresentation_PersonName /* PN */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1032 vr == ValueRepresentation_ShortString /* SH */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1033 vr == ValueRepresentation_SignedLong /* SL */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1034 vr == ValueRepresentation_SignedShort /* SS */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1035 vr == ValueRepresentation_ShortText /* ST */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1036 vr == ValueRepresentation_Time /* TM */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1037 vr == ValueRepresentation_UniqueIdentifier /* UI */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1038 vr == ValueRepresentation_UnsignedLong /* UL */ ||
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1039 vr == ValueRepresentation_UnsignedShort /* US */)
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1040 {
4213
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1041 /**
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1042 * This is Table 7.1-2. "Data Element with Explicit VR of AE,
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1043 * AS, AT, CS, DA, DS, DT, FL, FD, IS, LO, LT, PN, SH, SL, SS,
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1044 * ST, TM, UI, UL and US"
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1045 **/
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1046 if (position + 8 > size)
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1047 {
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1048 return false;
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1049 }
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1050
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1051 uint16_t length = ReadLittleEndianUint16(dicom + position + 6);
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1052 if (position + 8 + length > size)
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1053 {
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1054 return false;
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1055 }
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1056
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1057 value.assign(dicom + position + 8, length);
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1058 position += (8 + length);
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1059 }
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1060 else
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1061 {
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1062 /**
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1063 * This is Table 7.1-1. "Data Element with Explicit VR other
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1064 * than as shown in Table 7.1-2"
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1065 **/
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1066 if (position + 12 > size)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1067 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1068 return false;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1069 }
4213
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1070
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1071 uint16_t reserved = ReadLittleEndianUint16(dicom + position + 6);
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1072 if (reserved != 0)
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1073 {
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1074 return false;
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1075 }
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1076
4213
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1077 uint32_t length = ReadLittleEndianUint32(dicom + position + 8);
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1078 if (position + 12 + length > size)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1079 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1080 return false;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1081 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1082
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1083 value.assign(dicom + position + 12, length);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1084 position += (12 + length);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1085 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1086
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1087 if (!ValidateTag(vr, value))
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1088 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1089 return false;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1090 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1091
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1092 RemoveTagPadding(value, vr);
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1093
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1094 return true;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1095 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1096
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1097
3840
e7003b2203a7 fixing signature of DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3771
diff changeset
1098 bool DicomMap::IsDicomFile(const void* dicom,
3771
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
1099 size_t size)
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1100 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1101 /**
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1102 * http://dicom.nema.org/medical/dicom/current/output/chtml/part10/chapter_7.html
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1103 * According to Table 7.1-1, besides the "DICM" DICOM prefix, the
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1104 * file preamble (i.e. dicom[0..127]) should not be taken into
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1105 * account to determine whether the file is or is not a DICOM file.
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1106 **/
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1107
3840
e7003b2203a7 fixing signature of DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3771
diff changeset
1108 const uint8_t* p = reinterpret_cast<const uint8_t*>(dicom);
e7003b2203a7 fixing signature of DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3771
diff changeset
1109
3771
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
1110 return (size >= 132 &&
3840
e7003b2203a7 fixing signature of DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3771
diff changeset
1111 p[128] == 'D' &&
e7003b2203a7 fixing signature of DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3771
diff changeset
1112 p[129] == 'I' &&
e7003b2203a7 fixing signature of DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3771
diff changeset
1113 p[130] == 'C' &&
e7003b2203a7 fixing signature of DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3771
diff changeset
1114 p[131] == 'M');
3771
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
1115 }
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
1116
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
1117
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
1118 bool DicomMap::ParseDicomMetaInformation(DicomMap& result,
3840
e7003b2203a7 fixing signature of DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3771
diff changeset
1119 const void* dicom,
3771
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
1120 size_t size)
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
1121 {
74889e6f6d68 fix memory issues if parsing invalid DICOM file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3713
diff changeset
1122 if (!IsDicomFile(dicom, size))
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1123 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1124 return false;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1125 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1126
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1127
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1128 /**
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1129 * The DICOM File Meta Information must be encoded using the
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1130 * Explicit VR Little Endian Transfer Syntax
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1131 * (UID=1.2.840.10008.1.2.1).
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1132 **/
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1133
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1134 result.Clear();
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1135
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1136 // First, we read the "File Meta Information Group Length" tag
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1137 // (0002,0000) to know where to stop reading the meta header
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1138 size_t position = 132;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1139
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1140 DicomTag tag(0x0000, 0x0000); // Dummy initialization
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1141 ValueRepresentation vr;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1142 std::string value;
3840
e7003b2203a7 fixing signature of DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3771
diff changeset
1143 if (!ReadNextTag(tag, vr, value, reinterpret_cast<const char*>(dicom), size, position) ||
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1144 tag.GetGroup() != 0x0002 ||
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1145 tag.GetElement() != 0x0000 ||
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1146 vr != ValueRepresentation_UnsignedLong ||
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1147 value.size() != 4)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1148 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1149 return false;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1150 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1151
4213
be2eca8b02e1 testing DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4199
diff changeset
1152 size_t stopPosition = position + ReadLittleEndianUint32(value.c_str());
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1153 if (stopPosition > size)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1154 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1155 return false;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1156 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1157
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1158 while (position < stopPosition)
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1159 {
3840
e7003b2203a7 fixing signature of DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3771
diff changeset
1160 if (ReadNextTag(tag, vr, value, reinterpret_cast<const char*>(dicom), size, position))
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1161 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1162 result.SetValue(tag, value, IsBinaryValueRepresentation(vr));
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1163 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1164 else
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1165 {
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1166 return false;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1167 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1168 }
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1169
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1170 return true;
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1171 }
2380
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1172
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1173
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1174 static std::string ValueAsString(const DicomMap& summary,
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1175 const DicomTag& tag)
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1176 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1177 const DicomValue& value = summary.GetValue(tag);
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1178 if (value.IsNull())
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1179 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1180 return "(null)";
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1181 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1182 else
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1183 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1184 return value.GetContent();
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1185 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1186 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1187
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1188
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1189 void DicomMap::LogMissingTagsForStore() const
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1190 {
4501
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1191 std::string patientId, studyInstanceUid, seriesInstanceUid, sopInstanceUid;
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1192
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1193 if (HasTag(DICOM_TAG_PATIENT_ID))
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1194 {
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1195 patientId = ValueAsString(*this, DICOM_TAG_PATIENT_ID);
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1196 }
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1197
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1198 if (HasTag(DICOM_TAG_STUDY_INSTANCE_UID))
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1199 {
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1200 studyInstanceUid = ValueAsString(*this, DICOM_TAG_STUDY_INSTANCE_UID);
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1201 }
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1202
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1203 if (HasTag(DICOM_TAG_SERIES_INSTANCE_UID))
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1204 {
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1205 seriesInstanceUid = ValueAsString(*this, DICOM_TAG_SERIES_INSTANCE_UID);
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1206 }
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1207
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1208 if (HasTag(DICOM_TAG_SOP_INSTANCE_UID))
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1209 {
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1210 sopInstanceUid = ValueAsString(*this, DICOM_TAG_SOP_INSTANCE_UID);
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1211 }
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1212
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1213 LogMissingTagsForStore(patientId, studyInstanceUid, seriesInstanceUid, sopInstanceUid);
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1214 }
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1215
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1216
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1217 void DicomMap::LogMissingTagsForStore(const std::string& patientId,
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1218 const std::string& studyInstanceUid,
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1219 const std::string& seriesInstanceUid,
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1220 const std::string& sopInstanceUid)
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1221 {
2380
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1222 std::string s, t;
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1223
4501
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1224 if (!patientId.empty())
2380
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1225 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1226 if (t.size() > 0)
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1227 t += ", ";
4501
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1228 t += "PatientID=" + patientId;
2380
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1229 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1230 else
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1231 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1232 if (s.size() > 0)
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1233 s += ", ";
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1234 s += "PatientID";
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1235 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1236
4501
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1237 if (!studyInstanceUid.empty())
2380
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1238 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1239 if (t.size() > 0)
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1240 t += ", ";
4501
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1241 t += "StudyInstanceUID=" + studyInstanceUid;
2380
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1242 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1243 else
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1244 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1245 if (s.size() > 0)
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1246 s += ", ";
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1247 s += "StudyInstanceUID";
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1248 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1249
4501
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1250 if (!seriesInstanceUid.empty())
2380
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1251 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1252 if (t.size() > 0)
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1253 t += ", ";
4501
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1254 t += "SeriesInstanceUID=" + seriesInstanceUid;
2380
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1255 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1256 else
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1257 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1258 if (s.size() > 0)
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1259 s += ", ";
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1260 s += "SeriesInstanceUID";
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1261 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1262
4501
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1263 if (!sopInstanceUid.empty())
2380
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1264 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1265 if (t.size() > 0)
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1266 t += ", ";
4501
11c2ddb4e2ca FromDcmtkBridge::LogMissingTagsForStore()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
1267 t += "SOPInstanceUID=" + sopInstanceUid;
2380
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1268 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1269 else
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1270 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1271 if (s.size() > 0)
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1272 s += ", ";
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1273 s += "SOPInstanceUID";
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1274 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1275
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1276 if (t.size() == 0)
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1277 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1278 LOG(ERROR) << "Store has failed because all the required tags (" << s << ") are missing (is it a DICOMDIR file?)";
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1279 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1280 else
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1281 {
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1282 LOG(ERROR) << "Store has failed because required tags (" << s << ") are missing for the following instance: " << t;
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1283 }
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
1284 }
2412
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1285
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1286
3518
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1287 bool DicomMap::LookupStringValue(std::string& result,
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1288 const DicomTag& tag,
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1289 bool allowBinary) const
2412
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1290 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1291 const DicomValue* value = TestAndGetValue(tag);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1292
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1293 if (value == NULL)
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1294 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1295 return false;
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1296 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1297 else
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1298 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1299 return value->CopyToString(result, allowBinary);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1300 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1301 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1302
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1303 bool DicomMap::ParseInteger32(int32_t& result,
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1304 const DicomTag& tag) const
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1305 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1306 const DicomValue* value = TestAndGetValue(tag);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1307
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1308 if (value == NULL)
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1309 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1310 return false;
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1311 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1312 else
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1313 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1314 return value->ParseInteger32(result);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1315 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1316 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1317
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1318 bool DicomMap::ParseInteger64(int64_t& result,
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1319 const DicomTag& tag) const
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1320 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1321 const DicomValue* value = TestAndGetValue(tag);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1322
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1323 if (value == NULL)
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1324 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1325 return false;
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1326 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1327 else
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1328 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1329 return value->ParseInteger64(result);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1330 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1331 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1332
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1333 bool DicomMap::ParseUnsignedInteger32(uint32_t& result,
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1334 const DicomTag& tag) const
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1335 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1336 const DicomValue* value = TestAndGetValue(tag);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1337
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1338 if (value == NULL)
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1339 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1340 return false;
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1341 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1342 else
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1343 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1344 return value->ParseUnsignedInteger32(result);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1345 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1346 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1347
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1348 bool DicomMap::ParseUnsignedInteger64(uint64_t& result,
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1349 const DicomTag& tag) const
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1350 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1351 const DicomValue* value = TestAndGetValue(tag);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1352
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1353 if (value == NULL)
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1354 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1355 return false;
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1356 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1357 else
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1358 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1359 return value->ParseUnsignedInteger64(result);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1360 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1361 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1362
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1363 bool DicomMap::ParseFloat(float& result,
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1364 const DicomTag& tag) const
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1365 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1366 const DicomValue* value = TestAndGetValue(tag);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1367
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1368 if (value == NULL)
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1369 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1370 return false;
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1371 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1372 else
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1373 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1374 return value->ParseFloat(result);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1375 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1376 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1377
3690
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1378 bool DicomMap::ParseFirstFloat(float& result,
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1379 const DicomTag& tag) const
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1380 {
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1381 const DicomValue* value = TestAndGetValue(tag);
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1382
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1383 if (value == NULL)
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1384 {
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1385 return false;
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1386 }
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1387 else
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1388 {
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1389 return value->ParseFirstFloat(result);
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1390 }
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1391 }
a9ce35d67c3c implementation of "/instances/.../rendered" for grayscale images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3678
diff changeset
1392
2412
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1393 bool DicomMap::ParseDouble(double& result,
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1394 const DicomTag& tag) const
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1395 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1396 const DicomValue* value = TestAndGetValue(tag);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1397
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1398 if (value == NULL)
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1399 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1400 return false;
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1401 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1402 else
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1403 {
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1404 return value->ParseDouble(result);
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1405 }
cad393b41bc3 handy shortcuts in DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2380
diff changeset
1406 }
2863
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1407
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1408
5044
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1409 void DicomMap::FromDicomAsJson(const Json::Value& dicomAsJson, bool append, bool parseSequences)
3005
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1410 {
3498
957e06cbe76a additional check
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3496
diff changeset
1411 if (dicomAsJson.type() != Json::objectValue)
957e06cbe76a additional check
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3496
diff changeset
1412 {
957e06cbe76a additional check
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3496
diff changeset
1413 throw OrthancException(ErrorCode_BadFileFormat);
957e06cbe76a additional check
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3496
diff changeset
1414 }
957e06cbe76a additional check
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3496
diff changeset
1415
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1416 if (!append)
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1417 {
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1418 Clear();
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1419 }
3005
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1420
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1421 Json::Value::Members tags = dicomAsJson.getMemberNames();
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1422 for (Json::Value::Members::const_iterator
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1423 it = tags.begin(); it != tags.end(); ++it)
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1424 {
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1425 DicomTag tag(0, 0);
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1426 if (!DicomTag::ParseHexadecimal(tag, it->c_str()))
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1427 {
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1428 throw OrthancException(ErrorCode_CorruptedFile);
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1429 }
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1430
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1431 const Json::Value& value = dicomAsJson[*it];
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1432
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1433 if (value.type() != Json::objectValue ||
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1434 !value.isMember("Type") ||
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1435 !value.isMember("Value") ||
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1436 value["Type"].type() != Json::stringValue)
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1437 {
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1438 throw OrthancException(ErrorCode_CorruptedFile);
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1439 }
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1440
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1441 if (value["Type"] == "String")
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1442 {
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1443 if (value["Value"].type() != Json::stringValue)
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1444 {
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1445 throw OrthancException(ErrorCode_CorruptedFile);
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1446 }
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1447 else
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1448 {
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1449 SetValue(tag, value["Value"].asString(), false /* not binary */);
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1450 }
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1451 }
5044
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1452 else if (value["Type"] == "Sequence" && parseSequences)
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1453 {
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1454 if (value["Value"].type() != Json::arrayValue)
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1455 {
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1456 throw OrthancException(ErrorCode_CorruptedFile);
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1457 }
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1458 else
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1459 {
5323
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1460 SetSequenceValue(tag, value["Value"]);
5044
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1461 }
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1462 }
3005
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1463 }
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1464 }
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1465
8265a6b56100 DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2863
diff changeset
1466
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1467 void DicomMap::Merge(const DicomMap& other)
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1468 {
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1469 for (Content::const_iterator it = other.content_.begin();
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1470 it != other.content_.end(); ++it)
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1471 {
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1472 assert(it->second != NULL);
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1473
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1474 if (content_.find(it->first) == content_.end())
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1475 {
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1476 content_[it->first] = it->second->Clone();
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1477 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1478 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1479 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1480
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1481
3678
26c6d47467a9 DicomMap::MergeMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3653
diff changeset
1482 void DicomMap::MergeMainDicomTags(const DicomMap& other,
26c6d47467a9 DicomMap::MergeMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3653
diff changeset
1483 ResourceType level)
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1484 {
5177
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
1485 std::set<DicomTag> mainDicomTags;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
1486 DicomMap::MainDicomTagsConfiguration::GetInstance().GetMainDicomTagsByLevel(mainDicomTags, level);
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1487
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1488 for (std::set<DicomTag>::const_iterator itmt = mainDicomTags.begin();
4981
d0c34145320c cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4960
diff changeset
1489 itmt != mainDicomTags.end(); ++itmt)
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1490 {
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1491 Content::const_iterator found = other.content_.find(*itmt);
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1492
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1493 if (found != other.content_.end() &&
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1494 content_.find(*itmt) == content_.end())
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1495 {
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1496 assert(found->second != NULL);
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1497 content_[*itmt] = found->second->Clone();
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1498 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1499 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1500 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1501
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1502
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1503 void DicomMap::ExtractMainDicomTags(const DicomMap& other)
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1504 {
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1505 Clear();
3678
26c6d47467a9 DicomMap::MergeMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3653
diff changeset
1506 MergeMainDicomTags(other, ResourceType_Patient);
26c6d47467a9 DicomMap::MergeMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3653
diff changeset
1507 MergeMainDicomTags(other, ResourceType_Study);
26c6d47467a9 DicomMap::MergeMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3653
diff changeset
1508 MergeMainDicomTags(other, ResourceType_Series);
26c6d47467a9 DicomMap::MergeMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3653
diff changeset
1509 MergeMainDicomTags(other, ResourceType_Instance);
3006
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1510 }
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1511
0e1755e5efd0 DicomMap::ExtractMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3005
diff changeset
1512
3015
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3006
diff changeset
1513 bool DicomMap::HasOnlyMainDicomTags() const
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3006
diff changeset
1514 {
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1515 for (Content::const_iterator it = content_.begin(); it != content_.end(); ++it)
3015
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3006
diff changeset
1516 {
5177
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
1517 if (!DicomMap::MainDicomTagsConfiguration::GetInstance().IsMainDicomTag(it->first))
3015
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3006
diff changeset
1518 {
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3006
diff changeset
1519 return false;
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3006
diff changeset
1520 }
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3006
diff changeset
1521 }
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3006
diff changeset
1522
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3006
diff changeset
1523 return true;
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3006
diff changeset
1524 }
5036
877bc3b96476 Handle Dicom sequences in ExtraMainDicomTags and save them in the 'MainDicomSequences' metadata
Alain Mazy <am@osimis.io>
parents: 4982
diff changeset
1525
5044
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1526 void DicomMap::ExtractSequences(DicomMap& result) const
5036
877bc3b96476 Handle Dicom sequences in ExtraMainDicomTags and save them in the 'MainDicomSequences' metadata
Alain Mazy <am@osimis.io>
parents: 4982
diff changeset
1527 {
5044
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1528 result.Clear();
5036
877bc3b96476 Handle Dicom sequences in ExtraMainDicomTags and save them in the 'MainDicomSequences' metadata
Alain Mazy <am@osimis.io>
parents: 4982
diff changeset
1529
5044
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1530 for (Content::const_iterator it = content_.begin(); it != content_.end(); ++it)
5036
877bc3b96476 Handle Dicom sequences in ExtraMainDicomTags and save them in the 'MainDicomSequences' metadata
Alain Mazy <am@osimis.io>
parents: 4982
diff changeset
1531 {
5044
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1532 if (it->second->IsSequence())
5036
877bc3b96476 Handle Dicom sequences in ExtraMainDicomTags and save them in the 'MainDicomSequences' metadata
Alain Mazy <am@osimis.io>
parents: 4982
diff changeset
1533 {
5323
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1534 result.SetSequenceValue(it->first, it->second->GetSequenceContent());
5036
877bc3b96476 Handle Dicom sequences in ExtraMainDicomTags and save them in the 'MainDicomSequences' metadata
Alain Mazy <am@osimis.io>
parents: 4982
diff changeset
1535 }
877bc3b96476 Handle Dicom sequences in ExtraMainDicomTags and save them in the 'MainDicomSequences' metadata
Alain Mazy <am@osimis.io>
parents: 4982
diff changeset
1536 }
877bc3b96476 Handle Dicom sequences in ExtraMainDicomTags and save them in the 'MainDicomSequences' metadata
Alain Mazy <am@osimis.io>
parents: 4982
diff changeset
1537 }
3015
abe49ca61cd5 On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3006
diff changeset
1538
2863
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1539 void DicomMap::Serialize(Json::Value& target) const
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1540 {
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1541 target = Json::objectValue;
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1542
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1543 for (Content::const_iterator it = content_.begin(); it != content_.end(); ++it)
2863
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1544 {
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1545 assert(it->second != NULL);
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1546
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1547 std::string tag = it->first.Format();
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1548
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1549 Json::Value value;
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1550 it->second->Serialize(value);
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1551
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1552 target[tag] = value;
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1553 }
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1554 }
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1555
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1556
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1557 void DicomMap::Unserialize(const Json::Value& source)
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1558 {
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1559 Clear();
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1560
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1561 if (source.type() != Json::objectValue)
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1562 {
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1563 throw OrthancException(ErrorCode_BadFileFormat);
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1564 }
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1565
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1566 Json::Value::Members tags = source.getMemberNames();
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1567
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1568 for (size_t i = 0; i < tags.size(); i++)
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1569 {
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1570 DicomTag tag(0, 0);
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1571
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1572 if (!DicomTag::ParseHexadecimal(tag, tags[i].c_str()) ||
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1573 content_.find(tag) != content_.end())
2863
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1574 {
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1575 throw OrthancException(ErrorCode_BadFileFormat);
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1576 }
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1577
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3690
diff changeset
1578 std::unique_ptr<DicomValue> value(new DicomValue);
2863
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1579 value->Unserialize(source[tags[i]]);
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1580
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1581 content_[tag] = value.release();
2863
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1582 }
da12ba232119 serialization of DicomMap
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2804
diff changeset
1583 }
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1584
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1585
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1586 void DicomMap::FromDicomWeb(const Json::Value& source)
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1587 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1588 static const char* const ALPHABETIC = "Alphabetic";
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1589 static const char* const IDEOGRAPHIC = "Ideographic";
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1590 static const char* const INLINE_BINARY = "InlineBinary";
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1591 static const char* const PHONETIC = "Phonetic";
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1592 static const char* const VALUE = "Value";
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1593 static const char* const VR = "vr";
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1594
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1595 Clear();
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1596
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1597 if (source.type() != Json::objectValue)
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1598 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1599 throw OrthancException(ErrorCode_BadFileFormat);
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1600 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1601
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1602 Json::Value::Members tags = source.getMemberNames();
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1603
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1604 for (size_t i = 0; i < tags.size(); i++)
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1605 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1606 const Json::Value& item = source[tags[i]];
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1607 DicomTag tag(0, 0);
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1608
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1609 if (item.type() != Json::objectValue ||
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1610 !item.isMember(VR) ||
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1611 item[VR].type() != Json::stringValue ||
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1612 !DicomTag::ParseHexadecimal(tag, tags[i].c_str()))
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1613 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1614 throw OrthancException(ErrorCode_BadFileFormat);
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1615 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1616
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1617 ValueRepresentation vr = StringToValueRepresentation(item[VR].asString(), false);
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1618
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1619 if (item.isMember(INLINE_BINARY))
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1620 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1621 const Json::Value& value = item[INLINE_BINARY];
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1622
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1623 if (value.type() == Json::stringValue)
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1624 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1625 std::string decoded;
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1626 Toolbox::DecodeBase64(decoded, value.asString());
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1627 SetValue(tag, decoded, true /* binary data */);
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1628 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1629 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1630 else if (!item.isMember(VALUE))
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1631 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1632 // Tag is present, but it has a null value
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1633 SetValue(tag, "", false /* not binary */);
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1634 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1635 else
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1636 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1637 const Json::Value& value = item[VALUE];
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1638
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1639 if (value.type() == Json::arrayValue)
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1640 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1641 bool supported = true;
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1642
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1643 std::string s;
4199
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1644 for (Json::Value::ArrayIndex j = 0; j < value.size() && supported; j++)
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1645 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1646 if (!s.empty())
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1647 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1648 s += '\\';
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1649 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1650
4199
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1651 switch (value[j].type())
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1652 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1653 case Json::objectValue:
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1654 if (vr == ValueRepresentation_PersonName &&
4199
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1655 value[j].type() == Json::objectValue)
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1656 {
4199
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1657 if (value[j].isMember(ALPHABETIC) &&
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1658 value[j][ALPHABETIC].type() == Json::stringValue)
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1659 {
4199
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1660 s += value[j][ALPHABETIC].asString();
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1661 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1662
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1663 bool hasIdeographic = false;
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1664
4199
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1665 if (value[j].isMember(IDEOGRAPHIC) &&
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1666 value[j][IDEOGRAPHIC].type() == Json::stringValue)
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1667 {
4199
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1668 s += '=' + value[j][IDEOGRAPHIC].asString();
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1669 hasIdeographic = true;
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1670 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1671
4199
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1672 if (value[j].isMember(PHONETIC) &&
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1673 value[j][PHONETIC].type() == Json::stringValue)
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1674 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1675 if (!hasIdeographic)
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1676 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1677 s += '=';
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1678 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1679
4199
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1680 s += '=' + value[j][PHONETIC].asString();
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1681 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1682 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1683 else
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1684 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1685 // This is the case of sequences
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1686 supported = false;
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1687 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1688
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1689 break;
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1690
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1691 case Json::stringValue:
4199
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1692 s += value[j].asString();
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1693 break;
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1694
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1695 case Json::intValue:
4788
b47ee86a0d10 support 64 bit integers in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1696 s += boost::lexical_cast<std::string>(value[j].asInt64());
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1697 break;
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1698
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1699 case Json::uintValue:
4788
b47ee86a0d10 support 64 bit integers in DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4501
diff changeset
1700 s += boost::lexical_cast<std::string>(value[j].asUInt64());
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1701 break;
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1702
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1703 case Json::realValue:
4199
fbc49a65340a cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4119
diff changeset
1704 s += boost::lexical_cast<std::string>(value[j].asDouble());
3496
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1705 break;
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1706
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1707 default:
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1708 break;
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1709 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1710 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1711
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1712 if (supported)
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1713 {
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1714 SetValue(tag, s, false /* not binary */);
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1715 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1716 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1717 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1718 }
109631ed3564 DicomMap::FromDicomWeb()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
1719 }
3518
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1720
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1721
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1722 std::string DicomMap::GetStringValue(const DicomTag& tag,
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1723 const std::string& defaultValue,
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1724 bool allowBinary) const
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1725 {
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1726 std::string s;
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1727 if (LookupStringValue(s, tag, allowBinary))
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1728 {
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1729 return s;
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1730 }
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1731 else
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1732 {
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1733 return defaultValue;
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1734 }
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1735 }
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1736
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1737
3551
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1738 void DicomMap::RemoveBinaryTags()
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1739 {
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1740 Content kept;
3551
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1741
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1742 for (Content::iterator it = content_.begin(); it != content_.end(); ++it)
3551
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1743 {
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1744 assert(it->second != NULL);
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1745
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1746 if (!it->second->IsBinary() &&
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1747 !it->second->IsNull())
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1748 {
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1749 kept[it->first] = it->second;
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1750 }
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1751 else
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1752 {
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1753 delete it->second;
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1754 }
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1755 }
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1756
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1757 content_ = kept;
3551
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1758 }
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1759
173c7f363d8f DicomMap::RemoveBinaryTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3518
diff changeset
1760
5044
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1761 void DicomMap::RemoveSequences()
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1762 {
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1763 Content kept;
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1764
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1765 for (Content::iterator it = content_.begin(); it != content_.end(); ++it)
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1766 {
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1767 assert(it->second != NULL);
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1768
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1769 if (!it->second->IsSequence())
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1770 {
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1771 kept[it->first] = it->second;
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1772 }
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1773 else
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1774 {
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1775 delete it->second;
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1776 }
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1777 }
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1778
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1779 content_ = kept;
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1780 }
6fed78e13233 Refactored DicomMap to handle sequences when needed
Alain Mazy <am@osimis.io>
parents: 5040
diff changeset
1781
3650
e5811a9f8df0 removing DicomMap::LoadMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1782 void DicomMap::DumpMainDicomTags(Json::Value& target,
e5811a9f8df0 removing DicomMap::LoadMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1783 ResourceType level) const
e5811a9f8df0 removing DicomMap::LoadMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1784 {
5177
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
1785 std::set<DicomTag> mainDicomTags;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5176
diff changeset
1786 DicomMap::MainDicomTagsConfiguration::GetInstance().GetMainDicomTagsByLevel(mainDicomTags, level);
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1787
3650
e5811a9f8df0 removing DicomMap::LoadMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1788 target = Json::objectValue;
e5811a9f8df0 removing DicomMap::LoadMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1789
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1790 for (Content::const_iterator it = content_.begin(); it != content_.end(); ++it)
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1791 {
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1792 assert(it->second != NULL);
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1793
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1794 if (!it->second->IsBinary() &&
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1795 !it->second->IsNull())
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1796 {
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1797 std::set<DicomTag>::const_iterator found = mainDicomTags.find(it->first);
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1798
4932
b7ce2bb6b881 refactored the list of MainDicomTags to be able to change it dynamicaly. Unit tests and Integration tests ok
Alain Mazy <am@osimis.io>
parents: 4870
diff changeset
1799 if (found != mainDicomTags.end())
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1800 {
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1801 #if ORTHANC_ENABLE_DCMTK == 1
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1802 target[FromDcmtkBridge::GetTagName(*found, "")] = it->second->GetContent();
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1803 #else
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1804 target[found->Format()] = it->second->GetContent();
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1805 #endif
3651
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1806 }
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1807 }
46cb00e4adbb DicomMap::DumpMainDicomTags() and DicomMap::ParseMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3650
diff changeset
1808 }
3650
e5811a9f8df0 removing DicomMap::LoadMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1809 }
e5811a9f8df0 removing DicomMap::LoadMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1810
e5811a9f8df0 removing DicomMap::LoadMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1811
5323
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1812 ValueRepresentation DicomMap::GuessPixelDataValueRepresentation(DicomTransferSyntax transferSyntax) const
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1813 {
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1814 const DicomValue* value = TestAndGetValue(DICOM_TAG_BITS_ALLOCATED);
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1815
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1816 uint32_t bitsAllocated;
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1817 if (value == NULL ||
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1818 !value->ParseUnsignedInteger32(bitsAllocated))
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1819 {
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1820 bitsAllocated = 8;
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1821 }
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1822
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1823 return DicomImageInformation::GuessPixelDataValueRepresentation(transferSyntax, bitsAllocated);
138e9d0c08c1 added DicomMap::GuessPixelDataValueRepresentation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
1824 }
5040
1c08cd68250a removed the 'name' of MainDicomTags to simplify code -> DicomMap::ParseMainDicomTags has been deprecated and one should use DicomMap::FromDicomAsJson on 'full' formatted tags
Alain Mazy <am@osimis.io>
parents: 5038
diff changeset
1825
3650
e5811a9f8df0 removing DicomMap::LoadMainDicomTags()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
1826
3518
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1827 void DicomMap::Print(FILE* fp) const
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1828 {
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1829 DicomArray a(*this);
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1830 a.Print(fp);
a57c8163d9ae DicomMap::GetStringValue()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3498
diff changeset
1831 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1832 }