Mercurial > hg > orthanc-stone

annotate OrthancStone/Sources/Toolbox/DicomInstanceParameters.h @ 1637:d569effcd433

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author Sebastien Jodogne <s.jodogne@gmail.com>
date Tue, 10 Nov 2020 16:25:20 +0100
parents d1e0b08b809d
children 5cc589bfb385
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1 /**
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2 * Stone of Orthanc
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU Lesser General Public License
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9 * as published by the Free Software Foundation, either version 3 of
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10 * the License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * Lesser General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU Lesser General Public
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18 * License along with this program. If not, see
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19 * <http://www.gnu.org/licenses/>.
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20 **/
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21
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22
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23 #pragma once
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24
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25 #include "../StoneEnumerations.h"
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26 #include "../Scene2D/LookupTableTextureSceneLayer.h"
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27 #include "../Toolbox/CoordinateSystem3D.h"
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28
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29 #include <IDynamicObject.h>
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30 #include <DicomFormat/DicomImageInformation.h>
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31
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32 namespace OrthancStone
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33 {
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34 class DicomInstanceParameters :
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35 public Orthanc::IDynamicObject /* to be used as a payload to SlicesSorter */
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36 {
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37 // This class supersedes the deprecated "DicomFrameConverter"
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38
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39 private:
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40 struct Data // Plain old struct to ease the copy constructor
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41 {
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42 std::string orthancInstanceId_;
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43 std::string studyInstanceUid_;
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44 std::string seriesInstanceUid_;
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45 std::string sopInstanceUid_;
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46 Orthanc::DicomImageInformation imageInformation_; // TODO REMOVE
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47 SopClassUid sopClassUid_;
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48 unsigned int numberOfFrames_;
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49 unsigned int width_;
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50 unsigned int height_;
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51 double sliceThickness_;
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52 double pixelSpacingX_;
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53 double pixelSpacingY_;
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54 CoordinateSystem3D geometry_;
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55 Vector frameOffsets_;
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56 bool hasRescale_;
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57 double rescaleIntercept_;
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58 double rescaleSlope_;
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59 bool hasDefaultWindowing_;
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60 float defaultWindowingCenter_;
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61 float defaultWindowingWidth_;
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62 bool hasIndexInSeries_;
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63 unsigned int indexInSeries_;
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64 std::string doseUnits_;
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65 double doseGridScaling_;
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66
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67 explicit Data(const Orthanc::DicomMap& dicom);
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68 };
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69
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70
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71 Data data_;
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72
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73 void ApplyRescaleAndDoseScaling(Orthanc::ImageAccessor& image,
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74 bool useDouble) const;
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75
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76 public:
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77 explicit DicomInstanceParameters(const DicomInstanceParameters& other) :
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78 data_(other.data_)
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79 {
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80 }
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81
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82 explicit DicomInstanceParameters(const Orthanc::DicomMap& dicom) :
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83 data_(dicom)
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84 {
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85 }
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86
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87 DicomInstanceParameters* Clone() const
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88 {
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89 return new DicomInstanceParameters(*this);
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90 }
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91
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92 void SetOrthancInstanceIdentifier(const std::string& id)
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93 {
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94 data_.orthancInstanceId_ = id;
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95 }
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96
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97 const std::string& GetOrthancInstanceIdentifier() const
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98 {
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99 return data_.orthancInstanceId_;
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100 }
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101
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102 const Orthanc::DicomImageInformation& GetImageInformation() const
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103 {
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104 return data_.imageInformation_;
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105 }
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106
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107 const std::string& GetStudyInstanceUid() const
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108 {
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109 return data_.studyInstanceUid_;
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110 }
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111
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112 const std::string& GetSeriesInstanceUid() const
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113 {
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114 return data_.seriesInstanceUid_;
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115 }
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116
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117 const std::string& GetSopInstanceUid() const
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118 {
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119 return data_.sopInstanceUid_;
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120 }
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121
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122 SopClassUid GetSopClassUid() const
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123 {
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124 return data_.sopClassUid_;
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125 }
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126
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127 unsigned int GetNumberOfFrames() const
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128 {
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129 return data_.numberOfFrames_;
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130 }
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131
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132 unsigned int GetWidth() const
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133 {
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134 return data_.width_;
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135 }
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136
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137 unsigned int GetHeight() const
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138 {
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139 return data_.height_;
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140 }
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141
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142 double GetSliceThickness() const
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143 {
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144 return data_.sliceThickness_;
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145 }
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146
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147 double GetPixelSpacingX() const
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148 {
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149 return data_.pixelSpacingX_;
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150 }
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151
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152 double GetPixelSpacingY() const
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153 {
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154 return data_.pixelSpacingY_;
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155 }
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156
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157 const CoordinateSystem3D& GetGeometry() const
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158 {
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159 return data_.geometry_;
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160 }
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161
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162 CoordinateSystem3D GetFrameGeometry(unsigned int frame) const;
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163
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164 bool IsPlaneWithinSlice(unsigned int frame,
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165 const CoordinateSystem3D& plane) const;
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166
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167 bool IsColor() const;
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168
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169 bool HasRescale() const
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170 {
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171 return data_.hasRescale_;
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172 }
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173
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174 double GetRescaleIntercept() const;
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175
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176 double GetRescaleSlope() const;
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177
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178 bool HasDefaultWindowing() const
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179 {
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180 return data_.hasDefaultWindowing_;
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181 }
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182
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183 float GetDefaultWindowingCenter() const;
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184
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185 float GetDefaultWindowingWidth() const;
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186
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187 Orthanc::PixelFormat GetExpectedPixelFormat() const;
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188
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189 Orthanc::ImageAccessor* ConvertToFloat(const Orthanc::ImageAccessor& pixelData) const;
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190
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191 TextureBaseSceneLayer* CreateTexture(const Orthanc::ImageAccessor& pixelData) const;
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192
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193 LookupTableTextureSceneLayer* CreateLookupTableTexture(const Orthanc::ImageAccessor& pixelData) const;
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194
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195 bool HasIndexInSeries() const
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196 {
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197 return data_.hasIndexInSeries_;
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198 }
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199
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200 unsigned int GetIndexInSeries() const;
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201
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202 const std::string& GetDoseUnits() const
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203 {
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204 return data_.doseUnits_;
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205 }
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206
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207 void SetDoseGridScaling(double value)
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208 {
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209 data_.doseGridScaling_ = value;
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210 }
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211
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212 double GetDoseGridScaling() const
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213 {
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214 return data_.doseGridScaling_;
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215 }
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216
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217 double ApplyRescale(double value) const;
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218
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219 // Required for RT-DOSE
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220 bool ComputeRegularSpacing(double& target) const;
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221 };
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222 }