Mercurial > hg > orthanc-stone
annotate Framework/Deprecated/Toolbox/MessagingToolbox.cpp @ 1311:3d26447ddd28 broker
warning fixes + doc + indentation + header files in cmake for VC++ sln browsing
| author | Benjamin Golinvaux <bgo@osimis.io> |
|---|---|
| date | Mon, 09 Mar 2020 14:55:22 +0100 |
| parents | 8a0a62189f46 |
| children | 1a08b779be64 |
| rev | line source |
|---|---|
| 0 | 1 /** |
| 2 * Stone of Orthanc | |
| 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
| 4 * Department, University Hospital of Liege, Belgium | |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
| 0 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
| 47 | 8 * modify it under the terms of the GNU Affero General Public License |
| 9 * as published by the Free Software Foundation, either version 3 of | |
| 10 * the License, or (at your option) any later version. | |
| 0 | 11 * |
| 12 * This program is distributed in the hope that it will be useful, but | |
| 13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 47 | 14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
| 15 * Affero General Public License for more details. | |
| 16 * | |
| 17 * You should have received a copy of the GNU Affero General Public License | |
| 0 | 18 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
| 19 **/ | |
| 20 | |
| 21 #include "MessagingToolbox.h" | |
| 22 | |
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23 #include <Core/Images/Image.h> |
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24 #include <Core/Images/ImageProcessing.h> |
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25 #include <Core/Images/JpegReader.h> |
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26 #include <Core/Images/PngReader.h> |
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27 #include <Core/OrthancException.h> |
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28 #include <Core/Toolbox.h> |
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29 #include <Core/Logging.h> |
| 0 | 30 |
| 31 #include <boost/lexical_cast.hpp> | |
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32 |
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33 // 'Json::Reader': Use CharReader and CharReaderBuilder instead |
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34 #pragma warning(disable:4996) |
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35 |
| 0 | 36 #include <json/reader.h> |
| 309 | 37 #include <json/writer.h> |
| 0 | 38 |
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39 |
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40 namespace Deprecated |
| 0 | 41 { |
| 42 namespace MessagingToolbox | |
| 43 { | |
| 44 static bool ParseVersion(std::string& version, | |
| 45 unsigned int& major, | |
| 46 unsigned int& minor, | |
| 47 unsigned int& patch, | |
| 48 const Json::Value& info) | |
| 49 { | |
| 50 if (info.type() != Json::objectValue || | |
| 51 !info.isMember("Version") || | |
| 52 info["Version"].type() != Json::stringValue) | |
| 53 { | |
| 54 return false; | |
| 55 } | |
| 56 | |
| 57 version = info["Version"].asString(); | |
| 58 if (version == "mainline") | |
| 59 { | |
| 60 // Some arbitrary high values Orthanc versions will never reach ;) | |
| 61 major = 999; | |
| 62 minor = 999; | |
| 63 patch = 999; | |
| 64 return true; | |
| 65 } | |
| 66 | |
| 67 std::vector<std::string> tokens; | |
| 68 Orthanc::Toolbox::TokenizeString(tokens, version, '.'); | |
| 69 | |
| 70 if (tokens.size() != 2 && | |
| 71 tokens.size() != 3) | |
| 72 { | |
| 73 return false; | |
| 74 } | |
| 75 | |
| 76 int a, b, c; | |
| 77 try | |
| 78 { | |
| 79 a = boost::lexical_cast<int>(tokens[0]); | |
| 80 b = boost::lexical_cast<int>(tokens[1]); | |
| 81 | |
| 82 if (tokens.size() == 3) | |
| 83 { | |
| 84 c = boost::lexical_cast<int>(tokens[2]); | |
| 85 } | |
| 86 else | |
| 87 { | |
| 88 c = 0; | |
| 89 } | |
| 90 } | |
| 91 catch (boost::bad_lexical_cast&) | |
| 92 { | |
| 93 return false; | |
| 94 } | |
| 95 | |
| 96 if (a < 0 || | |
| 97 b < 0 || | |
| 98 c < 0) | |
| 99 { | |
| 100 return false; | |
| 101 } | |
| 102 else | |
| 103 { | |
| 104 major = static_cast<unsigned int>(a); | |
| 105 minor = static_cast<unsigned int>(b); | |
| 106 patch = static_cast<unsigned int>(c); | |
| 107 return true; | |
| 108 } | |
| 109 } | |
| 110 | |
| 34 | 111 |
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112 bool ParseJson(Json::Value& target, |
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113 const void* content, |
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114 size_t size) |
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115 { |
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116 Json::Reader reader; |
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117 return reader.parse(reinterpret_cast<const char*>(content), |
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118 reinterpret_cast<const char*>(content) + size, |
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119 target); |
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120 } |
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121 |
| 309 | 122 void JsonToString(std::string& target, |
| 123 const Json::Value& source) | |
| 124 { | |
| 125 Json::FastWriter writer; | |
| 126 target = writer.write(source); | |
| 127 } | |
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128 |
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129 static void ParseJsonException(Json::Value& target, |
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130 const std::string& source) |
| 0 | 131 { |
| 132 Json::Reader reader; | |
| 133 if (!reader.parse(source, target)) | |
| 134 { | |
| 135 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadFileFormat); | |
| 136 } | |
| 137 } | |
| 138 | |
| 34 | 139 |
| 0 | 140 void RestApiGet(Json::Value& target, |
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141 OrthancPlugins::IOrthancConnection& orthanc, |
| 0 | 142 const std::string& uri) |
| 143 { | |
| 144 std::string tmp; | |
| 145 orthanc.RestApiGet(tmp, uri); | |
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146 ParseJsonException(target, tmp); |
| 0 | 147 } |
| 148 | |
| 149 | |
| 34 | 150 void RestApiPost(Json::Value& target, |
| 151 OrthancPlugins::IOrthancConnection& orthanc, | |
| 152 const std::string& uri, | |
| 153 const std::string& body) | |
| 154 { | |
| 155 std::string tmp; | |
| 156 orthanc.RestApiPost(tmp, uri, body); | |
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157 ParseJsonException(target, tmp); |
| 34 | 158 } |
| 159 | |
| 160 | |
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161 bool HasWebViewerInstalled(OrthancPlugins::IOrthancConnection& orthanc) |
| 0 | 162 { |
| 163 try | |
| 164 { | |
| 165 Json::Value json; | |
| 166 RestApiGet(json, orthanc, "/plugins/web-viewer"); | |
| 167 return json.type() == Json::objectValue; | |
| 168 } | |
| 169 catch (Orthanc::OrthancException&) | |
| 170 { | |
| 171 return false; | |
| 172 } | |
| 173 } | |
| 174 | |
| 175 | |
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176 bool CheckOrthancVersion(OrthancPlugins::IOrthancConnection& orthanc) |
| 0 | 177 { |
| 178 Json::Value json; | |
| 179 std::string version; | |
| 180 unsigned int major, minor, patch; | |
| 181 | |
| 182 try | |
| 183 { | |
| 184 RestApiGet(json, orthanc, "/system"); | |
| 185 } | |
| 186 catch (Orthanc::OrthancException&) | |
| 187 { | |
| 188 LOG(ERROR) << "Cannot connect to your Orthanc server"; | |
| 189 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol); | |
| 190 } | |
| 191 | |
| 192 if (!ParseVersion(version, major, minor, patch, json)) | |
| 193 { | |
| 194 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol); | |
| 195 } | |
| 196 | |
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197 LOG(WARNING) << "Version of the Orthanc core (must be above 1.3.1): " << version; |
| 0 | 198 |
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199 // Stone is only compatible with Orthanc >= 1.3.1 |
| 0 | 200 if (major < 1 || |
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201 (major == 1 && minor < 3) || |
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202 (major == 1 && minor == 3 && patch < 1)) |
| 0 | 203 { |
| 204 return false; | |
| 205 } | |
| 206 | |
| 207 try | |
| 208 { | |
| 209 RestApiGet(json, orthanc, "/plugins/web-viewer"); | |
| 210 } | |
| 211 catch (Orthanc::OrthancException&) | |
| 212 { | |
| 213 // The Web viewer is not installed, this is OK | |
| 214 LOG(WARNING) << "The Web viewer plugin is not installed, progressive download is disabled"; | |
| 215 return true; | |
| 216 } | |
| 217 | |
| 218 if (!ParseVersion(version, major, minor, patch, json)) | |
| 219 { | |
| 220 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol); | |
| 221 } | |
| 222 | |
| 223 LOG(WARNING) << "Version of the Web viewer plugin (must be above 2.2): " << version; | |
| 224 | |
| 225 return (major >= 3 || | |
| 226 (major == 2 && minor >= 2)); | |
| 227 } | |
| 228 | |
| 229 | |
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230 Orthanc::ImageAccessor* DecodeFrame(OrthancPlugins::IOrthancConnection& orthanc, |
| 0 | 231 const std::string& instance, |
| 232 unsigned int frame, | |
| 233 Orthanc::PixelFormat targetFormat) | |
| 234 { | |
| 235 std::string uri = ("instances/" + instance + "/frames/" + | |
| 236 boost::lexical_cast<std::string>(frame)); | |
| 237 | |
| 238 std::string compressed; | |
| 239 | |
| 240 switch (targetFormat) | |
| 241 { | |
| 242 case Orthanc::PixelFormat_RGB24: | |
| 243 orthanc.RestApiGet(compressed, uri + "/preview"); | |
| 244 break; | |
| 245 | |
| 246 case Orthanc::PixelFormat_Grayscale16: | |
| 247 orthanc.RestApiGet(compressed, uri + "/image-uint16"); | |
| 248 break; | |
| 249 | |
| 250 case Orthanc::PixelFormat_SignedGrayscale16: | |
| 251 orthanc.RestApiGet(compressed, uri + "/image-int16"); | |
| 252 break; | |
| 253 | |
| 254 default: | |
| 255 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); | |
| 256 } | |
| 257 | |
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258 std::unique_ptr<Orthanc::PngReader> result(new Orthanc::PngReader); |
| 0 | 259 result->ReadFromMemory(compressed); |
| 260 | |
| 261 if (targetFormat == Orthanc::PixelFormat_SignedGrayscale16) | |
| 262 { | |
| 263 if (result->GetFormat() == Orthanc::PixelFormat_Grayscale16) | |
| 264 { | |
| 265 result->SetFormat(Orthanc::PixelFormat_SignedGrayscale16); | |
| 266 } | |
| 267 else | |
| 268 { | |
| 269 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol); | |
| 270 } | |
| 271 } | |
| 272 | |
| 273 return result.release(); | |
| 274 } | |
| 275 | |
| 276 | |
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277 Orthanc::ImageAccessor* DecodeJpegFrame(OrthancPlugins::IOrthancConnection& orthanc, |
| 0 | 278 const std::string& instance, |
| 279 unsigned int frame, | |
| 280 unsigned int quality, | |
| 281 Orthanc::PixelFormat targetFormat) | |
| 282 { | |
| 283 if (quality <= 0 || | |
| 284 quality > 100) | |
| 285 { | |
| 286 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange); | |
| 287 } | |
| 288 | |
| 289 // This requires the official Web viewer plugin to be installed! | |
| 290 std::string uri = ("web-viewer/instances/jpeg" + | |
| 291 boost::lexical_cast<std::string>(quality) + | |
| 292 "-" + instance + "_" + | |
| 293 boost::lexical_cast<std::string>(frame)); | |
| 294 | |
| 295 Json::Value encoded; | |
| 296 RestApiGet(encoded, orthanc, uri); | |
| 297 | |
| 298 if (encoded.type() != Json::objectValue || | |
| 299 !encoded.isMember("Orthanc") || | |
| 300 encoded["Orthanc"].type() != Json::objectValue) | |
| 301 { | |
| 302 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol); | |
| 303 } | |
| 304 | |
| 305 Json::Value& info = encoded["Orthanc"]; | |
| 306 if (!info.isMember("PixelData") || | |
| 307 !info.isMember("Stretched") || | |
| 308 !info.isMember("Compression") || | |
| 309 info["Compression"].type() != Json::stringValue || | |
| 310 info["PixelData"].type() != Json::stringValue || | |
| 311 info["Stretched"].type() != Json::booleanValue || | |
| 312 info["Compression"].asString() != "Jpeg") | |
| 313 { | |
| 314 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol); | |
| 315 } | |
| 316 | |
| 317 bool isSigned = false; | |
| 318 bool isStretched = info["Stretched"].asBool(); | |
| 319 | |
| 320 if (info.isMember("IsSigned")) | |
| 321 { | |
| 322 if (info["IsSigned"].type() != Json::booleanValue) | |
| 323 { | |
| 324 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol); | |
| 325 } | |
| 326 else | |
| 327 { | |
| 328 isSigned = info["IsSigned"].asBool(); | |
| 329 } | |
| 330 } | |
| 331 | |
| 332 std::string jpeg; | |
| 333 Orthanc::Toolbox::DecodeBase64(jpeg, info["PixelData"].asString()); | |
| 334 | |
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335 std::unique_ptr<Orthanc::JpegReader> reader(new Orthanc::JpegReader); |
| 0 | 336 reader->ReadFromMemory(jpeg); |
| 337 | |
| 338 if (reader->GetFormat() == Orthanc::PixelFormat_RGB24) // This is a color image | |
| 339 { | |
| 340 if (targetFormat != Orthanc::PixelFormat_RGB24) | |
| 341 { | |
| 342 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol); | |
| 343 } | |
| 344 | |
| 345 if (isSigned || isStretched) | |
| 346 { | |
| 347 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 348 } | |
| 349 else | |
| 350 { | |
| 351 return reader.release(); | |
| 352 } | |
| 353 } | |
| 354 | |
| 355 if (reader->GetFormat() != Orthanc::PixelFormat_Grayscale8) | |
| 356 { | |
| 357 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 358 } | |
| 359 | |
| 360 if (!isStretched) | |
| 361 { | |
| 362 if (targetFormat != reader->GetFormat()) | |
| 363 { | |
| 364 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol); | |
| 365 } | |
| 366 | |
| 367 return reader.release(); | |
| 368 } | |
| 369 | |
| 370 int32_t stretchLow = 0; | |
| 371 int32_t stretchHigh = 0; | |
| 372 | |
| 373 if (!info.isMember("StretchLow") || | |
| 374 !info.isMember("StretchHigh") || | |
| 375 info["StretchLow"].type() != Json::intValue || | |
| 376 info["StretchHigh"].type() != Json::intValue) | |
| 377 { | |
| 378 throw Orthanc::OrthancException(Orthanc::ErrorCode_NetworkProtocol); | |
| 379 } | |
| 380 | |
| 381 stretchLow = info["StretchLow"].asInt(); | |
| 382 stretchHigh = info["StretchHigh"].asInt(); | |
| 383 | |
| 384 if (stretchLow < -32768 || | |
| 385 stretchHigh > 65535 || | |
| 386 (stretchLow < 0 && stretchHigh > 32767)) | |
| 387 { | |
| 388 // This range cannot be represented with a uint16_t or an int16_t | |
| 389 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 390 } | |
| 391 | |
| 392 // Decode a grayscale JPEG 8bpp image coming from the Web viewer | |
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393 std::unique_ptr<Orthanc::ImageAccessor> image |
| 11 | 394 (new Orthanc::Image(targetFormat, reader->GetWidth(), reader->GetHeight(), false)); |
| 0 | 395 |
| 396 float scaling = static_cast<float>(stretchHigh - stretchLow) / 255.0f; | |
| 397 float offset = static_cast<float>(stretchLow) / scaling; | |
| 398 | |
| 399 Orthanc::ImageProcessing::Convert(*image, *reader); | |
| 178 | 400 Orthanc::ImageProcessing::ShiftScale(*image, offset, scaling, true); |
| 0 | 401 |
| 402 #if 0 | |
| 403 /*info.removeMember("PixelData"); | |
| 404 std::cout << info.toStyledString();*/ | |
| 405 | |
| 406 int64_t a, b; | |
| 407 Orthanc::ImageProcessing::GetMinMaxValue(a, b, *image); | |
| 408 std::cout << stretchLow << "->" << stretchHigh << " = " << a << "->" << b << std::endl; | |
| 409 #endif | |
| 410 | |
| 411 return image.release(); | |
| 412 } | |
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413 |
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414 |
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415 static void AddTag(Orthanc::DicomMap& target, |
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416 const OrthancPlugins::IDicomDataset& source, |
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417 const Orthanc::DicomTag& tag) |
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418 { |
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419 OrthancPlugins::DicomTag key(tag.GetGroup(), tag.GetElement()); |
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420 |
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421 std::string value; |
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422 if (source.GetStringValue(value, key)) |
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423 { |
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424 target.SetValue(tag, value, false); |
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425 } |
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426 } |
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427 |
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428 |
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429 void ConvertDataset(Orthanc::DicomMap& target, |
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430 const OrthancPlugins::IDicomDataset& source) |
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431 { |
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432 target.Clear(); |
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433 |
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434 AddTag(target, source, Orthanc::DICOM_TAG_BITS_ALLOCATED); |
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435 AddTag(target, source, Orthanc::DICOM_TAG_BITS_STORED); |
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436 AddTag(target, source, Orthanc::DICOM_TAG_COLUMNS); |
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437 AddTag(target, source, Orthanc::DICOM_TAG_DOSE_GRID_SCALING); |
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438 AddTag(target, source, Orthanc::DICOM_TAG_FRAME_INCREMENT_POINTER); |
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439 AddTag(target, source, Orthanc::DICOM_TAG_GRID_FRAME_OFFSET_VECTOR); |
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440 AddTag(target, source, Orthanc::DICOM_TAG_HIGH_BIT); |
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441 AddTag(target, source, Orthanc::DICOM_TAG_IMAGE_ORIENTATION_PATIENT); |
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442 AddTag(target, source, Orthanc::DICOM_TAG_IMAGE_POSITION_PATIENT); |
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443 AddTag(target, source, Orthanc::DICOM_TAG_NUMBER_OF_FRAMES); |
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444 AddTag(target, source, Orthanc::DICOM_TAG_PHOTOMETRIC_INTERPRETATION); |
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445 AddTag(target, source, Orthanc::DICOM_TAG_PIXEL_REPRESENTATION); |
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446 AddTag(target, source, Orthanc::DICOM_TAG_PIXEL_SPACING); |
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447 AddTag(target, source, Orthanc::DICOM_TAG_PLANAR_CONFIGURATION); |
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448 AddTag(target, source, Orthanc::DICOM_TAG_RESCALE_INTERCEPT); |
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449 AddTag(target, source, Orthanc::DICOM_TAG_RESCALE_SLOPE); |
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450 AddTag(target, source, Orthanc::DICOM_TAG_ROWS); |
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451 AddTag(target, source, Orthanc::DICOM_TAG_SAMPLES_PER_PIXEL); |
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452 AddTag(target, source, Orthanc::DICOM_TAG_SERIES_INSTANCE_UID); |
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453 AddTag(target, source, Orthanc::DICOM_TAG_SLICE_THICKNESS); |
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454 AddTag(target, source, Orthanc::DICOM_TAG_SOP_CLASS_UID); |
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455 AddTag(target, source, Orthanc::DICOM_TAG_SOP_INSTANCE_UID); |
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456 AddTag(target, source, Orthanc::DICOM_TAG_WINDOW_CENTER); |
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457 AddTag(target, source, Orthanc::DICOM_TAG_WINDOW_WIDTH); |
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458 } |
| 0 | 459 } |
| 460 } |