Mercurial > hg > orthanc-databases
annotate Framework/Plugins/IndexBackend.cpp @ 302:3a52e27a2d80
in GenericFormatter, replaced ${} by ${AUTOINCREMENT}
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Fri, 09 Jul 2021 16:25:08 +0200 |
| parents | 2447c290fc73 |
| children | dd4b0edd1661 |
| rev | line source |
|---|---|
| 0 | 1 /** |
| 2 * Orthanc - A Lightweight, RESTful DICOM Store | |
| 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
| 4 * Department, University Hospital of Liege, Belgium | |
|
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
| 0 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
| 8 * modify it under the terms of the GNU Affero General Public License | |
| 9 * as published by the Free Software Foundation, either version 3 of | |
| 10 * the License, or (at your option) any later version. | |
| 11 * | |
| 12 * This program is distributed in the hope that it will be useful, but | |
| 13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 15 * Affero General Public License for more details. | |
| 16 * | |
| 17 * You should have received a copy of the GNU Affero General Public License | |
| 18 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 19 **/ | |
| 20 | |
| 21 | |
| 22 #include "IndexBackend.h" | |
| 23 | |
| 152 | 24 #include "../../Resources/Orthanc/Databases/ISqlLookupFormatter.h" |
| 0 | 25 #include "../Common/BinaryStringValue.h" |
| 26 #include "../Common/Integer64Value.h" | |
| 27 #include "../Common/Utf8StringValue.h" | |
|
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28 #include "DatabaseBackendAdapterV2.h" |
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29 #include "DatabaseBackendAdapterV3.h" |
| 0 | 30 #include "GlobalProperties.h" |
| 31 | |
|
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32 #include <Compatibility.h> // For std::unique_ptr<> |
| 152 | 33 #include <Logging.h> |
| 34 #include <OrthancException.h> | |
| 0 | 35 |
| 36 | |
| 37 namespace OrthancDatabases | |
| 38 { | |
| 39 static std::string ConvertWildcardToLike(const std::string& query) | |
| 40 { | |
| 41 std::string s = query; | |
| 42 | |
| 43 for (size_t i = 0; i < s.size(); i++) | |
| 44 { | |
| 45 if (s[i] == '*') | |
| 46 { | |
| 47 s[i] = '%'; | |
| 48 } | |
| 49 else if (s[i] == '?') | |
| 50 { | |
| 51 s[i] = '_'; | |
| 52 } | |
| 53 } | |
| 54 | |
| 65 | 55 // TODO Escape underscores and percents |
| 56 | |
| 0 | 57 return s; |
| 58 } | |
| 59 | |
| 60 | |
| 61 template <typename T> | |
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62 static void ReadListOfIntegers(std::list<T>& target, |
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63 DatabaseManager::CachedStatement& statement, |
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64 const Dictionary& args) |
| 0 | 65 { |
| 66 statement.Execute(args); | |
| 67 | |
| 68 target.clear(); | |
| 69 | |
| 70 if (!statement.IsDone()) | |
| 71 { | |
| 72 if (statement.GetResultFieldsCount() != 1) | |
| 73 { | |
| 74 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
| 75 } | |
| 76 | |
| 77 statement.SetResultFieldType(0, ValueType_Integer64); | |
| 78 | |
| 79 while (!statement.IsDone()) | |
| 80 { | |
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81 target.push_back(static_cast<T>(statement.ReadInteger64(0))); |
| 0 | 82 statement.Next(); |
| 83 } | |
| 84 } | |
| 85 } | |
| 86 | |
| 87 | |
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88 static void ReadListOfStrings(std::list<std::string>& target, |
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89 DatabaseManager::CachedStatement& statement, |
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90 const Dictionary& args) |
| 0 | 91 { |
| 92 statement.Execute(args); | |
| 93 | |
| 94 target.clear(); | |
| 95 | |
| 96 if (!statement.IsDone()) | |
| 97 { | |
| 98 if (statement.GetResultFieldsCount() != 1) | |
| 99 { | |
| 100 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
| 101 } | |
| 102 | |
| 103 while (!statement.IsDone()) | |
| 104 { | |
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105 target.push_back(statement.ReadString(0)); |
| 0 | 106 statement.Next(); |
| 107 } | |
| 108 } | |
| 109 } | |
| 110 | |
| 111 | |
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112 void IndexBackend::ReadChangesInternal(IDatabaseBackendOutput& output, |
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113 bool& done, |
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114 DatabaseManager& manager, |
| 0 | 115 DatabaseManager::CachedStatement& statement, |
| 116 const Dictionary& args, | |
| 117 uint32_t maxResults) | |
| 118 { | |
| 119 statement.Execute(args); | |
| 120 | |
| 121 uint32_t count = 0; | |
| 122 | |
| 123 while (count < maxResults && | |
| 124 !statement.IsDone()) | |
| 125 { | |
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126 output.AnswerChange( |
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127 statement.ReadInteger64(0), |
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128 statement.ReadInteger32(1), |
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129 static_cast<OrthancPluginResourceType>(statement.ReadInteger32(3)), |
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130 GetPublicId(manager, statement.ReadInteger64(2)), |
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131 statement.ReadString(4)); |
| 0 | 132 |
| 133 statement.Next(); | |
| 134 count++; | |
| 135 } | |
| 136 | |
| 137 done = (count < maxResults || | |
| 138 statement.IsDone()); | |
| 139 } | |
| 140 | |
| 141 | |
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142 void IndexBackend::ReadExportedResourcesInternal(IDatabaseBackendOutput& output, |
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143 bool& done, |
| 0 | 144 DatabaseManager::CachedStatement& statement, |
| 145 const Dictionary& args, | |
| 146 uint32_t maxResults) | |
| 147 { | |
| 148 statement.Execute(args); | |
| 149 | |
| 150 uint32_t count = 0; | |
| 151 | |
| 152 while (count < maxResults && | |
| 153 !statement.IsDone()) | |
| 154 { | |
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155 int64_t seq = statement.ReadInteger64(0); |
| 0 | 156 OrthancPluginResourceType resourceType = |
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157 static_cast<OrthancPluginResourceType>(statement.ReadInteger32(1)); |
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158 std::string publicId = statement.ReadString(2); |
| 0 | 159 |
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160 output.AnswerExportedResource(seq, |
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161 resourceType, |
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162 publicId, |
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163 statement.ReadString(3), // modality |
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164 statement.ReadString(8), // date |
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165 statement.ReadString(4), // patient ID |
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166 statement.ReadString(5), // study instance UID |
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167 statement.ReadString(6), // series instance UID |
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168 statement.ReadString(7)); // sop instance UID |
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169 |
| 0 | 170 statement.Next(); |
| 171 count++; | |
| 172 } | |
| 173 | |
| 174 done = (count < maxResults || | |
| 175 statement.IsDone()); | |
| 176 } | |
| 177 | |
| 178 | |
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179 void IndexBackend::ClearDeletedFiles(DatabaseManager& manager) |
| 0 | 180 { |
| 181 DatabaseManager::CachedStatement statement( | |
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182 STATEMENT_FROM_HERE, manager, |
| 0 | 183 "DELETE FROM DeletedFiles"); |
| 184 | |
| 185 statement.Execute(); | |
| 186 } | |
| 187 | |
| 188 | |
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189 void IndexBackend::ClearDeletedResources(DatabaseManager& manager) |
| 0 | 190 { |
| 191 DatabaseManager::CachedStatement statement( | |
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192 STATEMENT_FROM_HERE, manager, |
| 0 | 193 "DELETE FROM DeletedResources"); |
| 194 | |
| 195 statement.Execute(); | |
| 196 } | |
| 197 | |
| 198 | |
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199 void IndexBackend::SignalDeletedFiles(IDatabaseBackendOutput& output, |
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200 DatabaseManager& manager) |
| 0 | 201 { |
| 202 DatabaseManager::CachedStatement statement( | |
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203 STATEMENT_FROM_HERE, manager, |
| 0 | 204 "SELECT * FROM DeletedFiles"); |
| 205 | |
| 206 statement.SetReadOnly(true); | |
| 207 statement.Execute(); | |
| 208 | |
| 209 while (!statement.IsDone()) | |
| 210 { | |
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211 std::string a = statement.ReadString(0); |
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212 std::string b = statement.ReadString(5); |
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213 std::string c = statement.ReadString(6); |
| 0 | 214 |
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215 output.SignalDeletedAttachment(a.c_str(), |
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216 statement.ReadInteger32(1), |
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217 statement.ReadInteger64(3), |
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218 b.c_str(), |
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219 statement.ReadInteger32(4), |
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220 statement.ReadInteger64(2), |
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221 c.c_str()); |
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222 |
| 0 | 223 statement.Next(); |
| 224 } | |
| 225 } | |
| 226 | |
| 227 | |
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228 void IndexBackend::SignalDeletedResources(IDatabaseBackendOutput& output, |
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229 DatabaseManager& manager) |
| 0 | 230 { |
| 231 DatabaseManager::CachedStatement statement( | |
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232 STATEMENT_FROM_HERE, manager, |
| 0 | 233 "SELECT * FROM DeletedResources"); |
| 234 | |
| 235 statement.SetReadOnly(true); | |
| 236 statement.Execute(); | |
| 237 | |
| 238 while (!statement.IsDone()) | |
| 239 { | |
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240 output.SignalDeletedResource( |
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241 statement.ReadString(1), |
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242 static_cast<OrthancPluginResourceType>(statement.ReadInteger32(0))); |
| 0 | 243 |
| 244 statement.Next(); | |
| 245 } | |
| 246 } | |
| 247 | |
| 248 | |
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249 IndexBackend::IndexBackend(OrthancPluginContext* context) : |
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250 context_(context) |
| 0 | 251 { |
| 252 } | |
| 253 | |
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254 |
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255 void IndexBackend::SetOutputFactory(IDatabaseBackendOutput::IFactory* factory) |
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256 { |
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257 boost::unique_lock<boost::shared_mutex> lock(outputFactoryMutex_); |
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258 |
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259 if (factory == NULL) |
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260 { |
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261 throw Orthanc::OrthancException(Orthanc::ErrorCode_NullPointer); |
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262 } |
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263 else if (outputFactory_.get() != NULL) |
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264 { |
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265 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls); |
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266 } |
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267 else |
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268 { |
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269 outputFactory_.reset(factory); |
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270 } |
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271 } |
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272 |
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273 |
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274 IDatabaseBackendOutput* IndexBackend::CreateOutput() |
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275 { |
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276 boost::shared_lock<boost::shared_mutex> lock(outputFactoryMutex_); |
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277 |
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278 if (outputFactory_.get() == NULL) |
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279 { |
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280 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls); |
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281 } |
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282 else |
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283 { |
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284 return outputFactory_->CreateOutput(); |
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285 } |
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286 } |
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287 |
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288 |
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289 static void ExecuteAddAttachment(DatabaseManager::CachedStatement& statement, |
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290 Dictionary& args, |
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291 int64_t id, |
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292 const OrthancPluginAttachment& attachment) |
| 0 | 293 { |
| 294 statement.SetParameterType("id", ValueType_Integer64); | |
| 295 statement.SetParameterType("type", ValueType_Integer64); | |
| 296 statement.SetParameterType("uuid", ValueType_Utf8String); | |
| 297 statement.SetParameterType("compressed", ValueType_Integer64); | |
| 298 statement.SetParameterType("uncompressed", ValueType_Integer64); | |
| 299 statement.SetParameterType("compression", ValueType_Integer64); | |
| 300 statement.SetParameterType("hash", ValueType_Utf8String); | |
| 301 statement.SetParameterType("hash-compressed", ValueType_Utf8String); | |
| 302 | |
| 303 args.SetIntegerValue("id", id); | |
| 304 args.SetIntegerValue("type", attachment.contentType); | |
| 305 args.SetUtf8Value("uuid", attachment.uuid); | |
| 306 args.SetIntegerValue("compressed", attachment.compressedSize); | |
| 307 args.SetIntegerValue("uncompressed", attachment.uncompressedSize); | |
| 308 args.SetIntegerValue("compression", attachment.compressionType); | |
| 309 args.SetUtf8Value("hash", attachment.uncompressedHash); | |
| 310 args.SetUtf8Value("hash-compressed", attachment.compressedHash); | |
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311 |
| 0 | 312 statement.Execute(args); |
| 313 } | |
| 314 | |
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315 |
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316 void IndexBackend::AddAttachment(DatabaseManager& manager, |
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317 int64_t id, |
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318 const OrthancPluginAttachment& attachment, |
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319 int64_t revision) |
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320 { |
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321 if (HasRevisionsSupport()) |
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322 { |
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323 DatabaseManager::CachedStatement statement( |
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324 STATEMENT_FROM_HERE, manager, |
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325 "INSERT INTO AttachedFiles VALUES(${id}, ${type}, ${uuid}, ${compressed}, " |
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326 "${uncompressed}, ${compression}, ${hash}, ${hash-compressed}, ${revision})"); |
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327 |
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328 Dictionary args; |
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329 |
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330 statement.SetParameterType("revision", ValueType_Integer64); |
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331 args.SetIntegerValue("revision", revision); |
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332 |
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333 ExecuteAddAttachment(statement, args, id, attachment); |
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334 } |
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335 else |
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336 { |
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337 DatabaseManager::CachedStatement statement( |
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338 STATEMENT_FROM_HERE, manager, |
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339 "INSERT INTO AttachedFiles VALUES(${id}, ${type}, ${uuid}, ${compressed}, " |
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340 "${uncompressed}, ${compression}, ${hash}, ${hash-compressed})"); |
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341 |
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342 Dictionary args; |
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343 ExecuteAddAttachment(statement, args, id, attachment); |
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344 } |
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345 } |
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346 |
| 0 | 347 |
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348 void IndexBackend::AttachChild(DatabaseManager& manager, |
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349 int64_t parent, |
| 0 | 350 int64_t child) |
| 351 { | |
| 352 DatabaseManager::CachedStatement statement( | |
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353 STATEMENT_FROM_HERE, manager, |
| 0 | 354 "UPDATE Resources SET parentId = ${parent} WHERE internalId = ${child}"); |
| 355 | |
| 356 statement.SetParameterType("parent", ValueType_Integer64); | |
| 357 statement.SetParameterType("child", ValueType_Integer64); | |
| 358 | |
| 359 Dictionary args; | |
| 360 args.SetIntegerValue("parent", parent); | |
| 361 args.SetIntegerValue("child", child); | |
| 362 | |
| 363 statement.Execute(args); | |
| 364 } | |
| 365 | |
| 366 | |
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367 void IndexBackend::ClearChanges(DatabaseManager& manager) |
| 0 | 368 { |
| 369 DatabaseManager::CachedStatement statement( | |
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370 STATEMENT_FROM_HERE, manager, |
| 0 | 371 "DELETE FROM Changes"); |
| 372 | |
| 373 statement.Execute(); | |
| 374 } | |
| 375 | |
| 376 | |
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377 void IndexBackend::ClearExportedResources(DatabaseManager& manager) |
| 0 | 378 { |
| 379 DatabaseManager::CachedStatement statement( | |
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380 STATEMENT_FROM_HERE, manager, |
| 0 | 381 "DELETE FROM ExportedResources"); |
| 382 | |
| 383 statement.Execute(); | |
| 384 } | |
| 385 | |
| 386 | |
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387 void IndexBackend::DeleteAttachment(IDatabaseBackendOutput& output, |
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388 DatabaseManager& manager, |
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389 int64_t id, |
| 0 | 390 int32_t attachment) |
| 391 { | |
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392 ClearDeletedFiles(manager); |
| 0 | 393 |
| 394 { | |
| 395 DatabaseManager::CachedStatement statement( | |
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396 STATEMENT_FROM_HERE, manager, |
| 0 | 397 "DELETE FROM AttachedFiles WHERE id=${id} AND fileType=${type}"); |
| 398 | |
| 399 statement.SetParameterType("id", ValueType_Integer64); | |
| 400 statement.SetParameterType("type", ValueType_Integer64); | |
| 401 | |
| 402 Dictionary args; | |
| 403 args.SetIntegerValue("id", id); | |
| 404 args.SetIntegerValue("type", static_cast<int>(attachment)); | |
| 405 | |
| 406 statement.Execute(args); | |
| 407 } | |
| 408 | |
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409 SignalDeletedFiles(output, manager); |
| 0 | 410 } |
| 411 | |
|
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412 |
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413 void IndexBackend::DeleteMetadata(DatabaseManager& manager, |
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414 int64_t id, |
| 0 | 415 int32_t metadataType) |
| 416 { | |
| 417 DatabaseManager::CachedStatement statement( | |
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418 STATEMENT_FROM_HERE, manager, |
| 0 | 419 "DELETE FROM Metadata WHERE id=${id} and type=${type}"); |
| 420 | |
| 421 statement.SetParameterType("id", ValueType_Integer64); | |
| 422 statement.SetParameterType("type", ValueType_Integer64); | |
| 423 | |
| 424 Dictionary args; | |
| 425 args.SetIntegerValue("id", id); | |
| 426 args.SetIntegerValue("type", static_cast<int>(metadataType)); | |
| 427 | |
| 428 statement.Execute(args); | |
| 429 } | |
| 430 | |
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431 |
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432 void IndexBackend::DeleteResource(IDatabaseBackendOutput& output, |
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433 DatabaseManager& manager, |
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434 int64_t id) |
| 0 | 435 { |
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436 assert(manager.GetDialect() != Dialect_MySQL); |
| 0 | 437 |
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438 ClearDeletedFiles(manager); |
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439 ClearDeletedResources(manager); |
| 0 | 440 |
| 441 { | |
| 442 DatabaseManager::CachedStatement statement( | |
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443 STATEMENT_FROM_HERE, manager, |
| 0 | 444 "DELETE FROM RemainingAncestor"); |
| 445 | |
| 446 statement.Execute(); | |
| 447 } | |
| 448 | |
| 449 { | |
| 450 DatabaseManager::CachedStatement statement( | |
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451 STATEMENT_FROM_HERE, manager, |
| 0 | 452 "DELETE FROM Resources WHERE internalId=${id}"); |
| 453 | |
| 454 statement.SetParameterType("id", ValueType_Integer64); | |
| 455 | |
| 456 Dictionary args; | |
| 457 args.SetIntegerValue("id", id); | |
| 458 | |
| 459 statement.Execute(args); | |
| 460 } | |
| 461 | |
| 462 | |
| 463 { | |
| 464 DatabaseManager::CachedStatement statement( | |
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465 STATEMENT_FROM_HERE, manager, |
| 0 | 466 "SELECT * FROM RemainingAncestor"); |
| 467 | |
| 468 statement.Execute(); | |
| 469 | |
| 470 if (!statement.IsDone()) | |
| 471 { | |
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472 output.SignalRemainingAncestor( |
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473 statement.ReadString(1), |
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474 static_cast<OrthancPluginResourceType>(statement.ReadInteger32(0))); |
| 0 | 475 |
| 476 // There is at most 1 remaining ancestor | |
| 477 assert((statement.Next(), statement.IsDone())); | |
| 478 } | |
| 479 } | |
| 480 | |
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481 SignalDeletedFiles(output, manager); |
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482 SignalDeletedResources(output, manager); |
| 0 | 483 } |
| 484 | |
| 485 | |
| 486 void IndexBackend::GetAllInternalIds(std::list<int64_t>& target, | |
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487 DatabaseManager& manager, |
| 0 | 488 OrthancPluginResourceType resourceType) |
| 489 { | |
| 490 DatabaseManager::CachedStatement statement( | |
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491 STATEMENT_FROM_HERE, manager, |
| 0 | 492 "SELECT internalId FROM Resources WHERE resourceType=${type}"); |
| 493 | |
| 494 statement.SetReadOnly(true); | |
| 495 statement.SetParameterType("type", ValueType_Integer64); | |
| 496 | |
| 497 Dictionary args; | |
| 498 args.SetIntegerValue("type", static_cast<int>(resourceType)); | |
| 499 | |
| 500 ReadListOfIntegers<int64_t>(target, statement, args); | |
| 501 } | |
| 502 | |
| 503 | |
| 504 void IndexBackend::GetAllPublicIds(std::list<std::string>& target, | |
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505 DatabaseManager& manager, |
| 0 | 506 OrthancPluginResourceType resourceType) |
| 507 { | |
| 508 DatabaseManager::CachedStatement statement( | |
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509 STATEMENT_FROM_HERE, manager, |
| 0 | 510 "SELECT publicId FROM Resources WHERE resourceType=${type}"); |
| 511 | |
| 512 statement.SetReadOnly(true); | |
| 513 statement.SetParameterType("type", ValueType_Integer64); | |
| 514 | |
| 515 Dictionary args; | |
| 516 args.SetIntegerValue("type", static_cast<int>(resourceType)); | |
| 517 | |
| 518 ReadListOfStrings(target, statement, args); | |
| 519 } | |
| 520 | |
| 521 | |
| 522 void IndexBackend::GetAllPublicIds(std::list<std::string>& target, | |
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523 DatabaseManager& manager, |
| 0 | 524 OrthancPluginResourceType resourceType, |
| 525 uint64_t since, | |
| 526 uint64_t limit) | |
| 527 { | |
| 528 DatabaseManager::CachedStatement statement( | |
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529 STATEMENT_FROM_HERE, manager, |
| 0 | 530 "SELECT publicId FROM (SELECT publicId FROM Resources " |
| 531 "WHERE resourceType=${type}) AS tmp " | |
| 532 "ORDER BY tmp.publicId LIMIT ${limit} OFFSET ${since}"); | |
| 533 | |
| 534 statement.SetReadOnly(true); | |
| 535 statement.SetParameterType("type", ValueType_Integer64); | |
| 536 statement.SetParameterType("limit", ValueType_Integer64); | |
| 537 statement.SetParameterType("since", ValueType_Integer64); | |
| 538 | |
| 539 Dictionary args; | |
| 540 args.SetIntegerValue("type", static_cast<int>(resourceType)); | |
| 541 args.SetIntegerValue("limit", limit); | |
| 542 args.SetIntegerValue("since", since); | |
| 543 | |
| 544 ReadListOfStrings(target, statement, args); | |
| 545 } | |
| 546 | |
| 547 | |
| 548 /* Use GetOutput().AnswerChange() */ | |
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549 void IndexBackend::GetChanges(IDatabaseBackendOutput& output, |
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550 bool& done /*out*/, |
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551 DatabaseManager& manager, |
| 0 | 552 int64_t since, |
| 553 uint32_t maxResults) | |
| 554 { | |
| 555 DatabaseManager::CachedStatement statement( | |
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556 STATEMENT_FROM_HERE, manager, |
| 0 | 557 "SELECT * FROM Changes WHERE seq>${since} ORDER BY seq LIMIT ${limit}"); |
| 558 | |
| 559 statement.SetReadOnly(true); | |
| 560 statement.SetParameterType("limit", ValueType_Integer64); | |
| 561 statement.SetParameterType("since", ValueType_Integer64); | |
| 562 | |
| 563 Dictionary args; | |
| 564 args.SetIntegerValue("limit", maxResults + 1); | |
| 565 args.SetIntegerValue("since", since); | |
| 566 | |
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567 ReadChangesInternal(output, done, manager, statement, args, maxResults); |
| 0 | 568 } |
| 569 | |
| 570 | |
| 571 void IndexBackend::GetChildrenInternalId(std::list<int64_t>& target /*out*/, | |
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572 DatabaseManager& manager, |
| 0 | 573 int64_t id) |
| 574 { | |
| 575 DatabaseManager::CachedStatement statement( | |
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576 STATEMENT_FROM_HERE, manager, |
| 0 | 577 "SELECT a.internalId FROM Resources AS a, Resources AS b " |
| 578 "WHERE a.parentId = b.internalId AND b.internalId = ${id}"); | |
| 579 | |
| 580 statement.SetReadOnly(true); | |
| 581 statement.SetParameterType("id", ValueType_Integer64); | |
| 582 | |
| 583 Dictionary args; | |
| 584 args.SetIntegerValue("id", id); | |
| 585 | |
| 586 ReadListOfIntegers<int64_t>(target, statement, args); | |
| 587 } | |
| 588 | |
| 589 | |
| 590 void IndexBackend::GetChildrenPublicId(std::list<std::string>& target /*out*/, | |
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591 DatabaseManager& manager, |
| 0 | 592 int64_t id) |
| 593 { | |
| 594 DatabaseManager::CachedStatement statement( | |
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595 STATEMENT_FROM_HERE, manager, |
| 0 | 596 "SELECT a.publicId FROM Resources AS a, Resources AS b " |
| 597 "WHERE a.parentId = b.internalId AND b.internalId = ${id}"); | |
| 598 | |
| 599 statement.SetReadOnly(true); | |
| 600 statement.SetParameterType("id", ValueType_Integer64); | |
| 601 | |
| 602 Dictionary args; | |
| 603 args.SetIntegerValue("id", id); | |
| 604 | |
| 605 ReadListOfStrings(target, statement, args); | |
| 606 } | |
| 607 | |
| 608 | |
| 609 /* Use GetOutput().AnswerExportedResource() */ | |
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610 void IndexBackend::GetExportedResources(IDatabaseBackendOutput& output, |
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611 bool& done /*out*/, |
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612 DatabaseManager& manager, |
| 0 | 613 int64_t since, |
| 614 uint32_t maxResults) | |
| 615 { | |
| 616 DatabaseManager::CachedStatement statement( | |
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617 STATEMENT_FROM_HERE, manager, |
| 0 | 618 "SELECT * FROM ExportedResources WHERE seq>${since} ORDER BY seq LIMIT ${limit}"); |
| 619 | |
| 620 statement.SetReadOnly(true); | |
| 621 statement.SetParameterType("limit", ValueType_Integer64); | |
| 622 statement.SetParameterType("since", ValueType_Integer64); | |
| 623 | |
| 624 Dictionary args; | |
| 625 args.SetIntegerValue("limit", maxResults + 1); | |
| 626 args.SetIntegerValue("since", since); | |
| 627 | |
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628 ReadExportedResourcesInternal(output, done, statement, args, maxResults); |
| 0 | 629 } |
| 630 | |
| 631 | |
| 632 /* Use GetOutput().AnswerChange() */ | |
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633 void IndexBackend::GetLastChange(IDatabaseBackendOutput& output, |
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634 DatabaseManager& manager) |
| 0 | 635 { |
| 636 DatabaseManager::CachedStatement statement( | |
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637 STATEMENT_FROM_HERE, manager, |
| 0 | 638 "SELECT * FROM Changes ORDER BY seq DESC LIMIT 1"); |
| 639 | |
| 640 statement.SetReadOnly(true); | |
| 641 | |
| 642 Dictionary args; | |
| 643 | |
| 644 bool done; // Ignored | |
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645 ReadChangesInternal(output, done, manager, statement, args, 1); |
| 0 | 646 } |
| 647 | |
| 648 | |
| 649 /* Use GetOutput().AnswerExportedResource() */ | |
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650 void IndexBackend::GetLastExportedResource(IDatabaseBackendOutput& output, |
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651 DatabaseManager& manager) |
| 0 | 652 { |
| 653 DatabaseManager::CachedStatement statement( | |
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654 STATEMENT_FROM_HERE, manager, |
| 0 | 655 "SELECT * FROM ExportedResources ORDER BY seq DESC LIMIT 1"); |
| 656 | |
| 657 statement.SetReadOnly(true); | |
| 658 | |
| 659 Dictionary args; | |
| 660 | |
| 661 bool done; // Ignored | |
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662 ReadExportedResourcesInternal(output, done, statement, args, 1); |
| 0 | 663 } |
| 664 | |
| 665 | |
| 666 /* Use GetOutput().AnswerDicomTag() */ | |
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667 void IndexBackend::GetMainDicomTags(IDatabaseBackendOutput& output, |
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668 DatabaseManager& manager, |
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669 int64_t id) |
| 0 | 670 { |
| 671 DatabaseManager::CachedStatement statement( | |
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672 STATEMENT_FROM_HERE, manager, |
| 0 | 673 "SELECT * FROM MainDicomTags WHERE id=${id}"); |
| 674 | |
| 675 statement.SetReadOnly(true); | |
| 676 statement.SetParameterType("id", ValueType_Integer64); | |
| 677 | |
| 678 Dictionary args; | |
| 679 args.SetIntegerValue("id", id); | |
| 680 | |
| 681 statement.Execute(args); | |
| 682 | |
| 683 while (!statement.IsDone()) | |
| 684 { | |
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685 output.AnswerDicomTag(static_cast<uint16_t>(statement.ReadInteger64(1)), |
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686 static_cast<uint16_t>(statement.ReadInteger64(2)), |
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687 statement.ReadString(3)); |
| 0 | 688 statement.Next(); |
| 689 } | |
| 690 } | |
| 691 | |
| 692 | |
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693 std::string IndexBackend::GetPublicId(DatabaseManager& manager, |
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694 int64_t resourceId) |
| 0 | 695 { |
| 696 DatabaseManager::CachedStatement statement( | |
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697 STATEMENT_FROM_HERE, manager, |
| 0 | 698 "SELECT publicId FROM Resources WHERE internalId=${id}"); |
| 699 | |
| 700 statement.SetReadOnly(true); | |
| 701 statement.SetParameterType("id", ValueType_Integer64); | |
| 702 | |
| 703 Dictionary args; | |
| 704 args.SetIntegerValue("id", resourceId); | |
| 705 | |
| 706 statement.Execute(args); | |
| 707 | |
| 708 if (statement.IsDone()) | |
| 709 { | |
| 710 throw Orthanc::OrthancException(Orthanc::ErrorCode_UnknownResource); | |
| 711 } | |
| 712 else | |
| 713 { | |
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714 return statement.ReadString(0); |
| 0 | 715 } |
| 716 } | |
| 717 | |
| 718 | |
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719 uint64_t IndexBackend::GetResourcesCount(DatabaseManager& manager, |
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720 OrthancPluginResourceType resourceType) |
| 0 | 721 { |
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722 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 723 |
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724 switch (manager.GetDialect()) |
| 0 | 725 { |
| 726 case Dialect_MySQL: | |
| 727 statement.reset(new DatabaseManager::CachedStatement( | |
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728 STATEMENT_FROM_HERE, manager, |
| 0 | 729 "SELECT CAST(COUNT(*) AS UNSIGNED INT) FROM Resources WHERE resourceType=${type}")); |
| 730 break; | |
| 731 | |
| 732 case Dialect_PostgreSQL: | |
| 733 statement.reset(new DatabaseManager::CachedStatement( | |
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734 STATEMENT_FROM_HERE, manager, |
|
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735 "SELECT CAST(COUNT(*) AS BIGINT) FROM Resources WHERE resourceType=${type}")); |
| 0 | 736 break; |
| 737 | |
| 301 | 738 case Dialect_MSSQL: |
| 0 | 739 case Dialect_SQLite: |
| 740 statement.reset(new DatabaseManager::CachedStatement( | |
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741 STATEMENT_FROM_HERE, manager, |
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742 "SELECT COUNT(*) FROM Resources WHERE resourceType=${type}")); |
| 0 | 743 break; |
| 744 | |
| 745 default: | |
| 746 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 747 } | |
| 748 | |
| 749 statement->SetReadOnly(true); | |
| 750 statement->SetParameterType("type", ValueType_Integer64); | |
| 751 | |
| 752 Dictionary args; | |
| 753 args.SetIntegerValue("type", resourceType); | |
| 754 | |
| 755 statement->Execute(args); | |
| 756 | |
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757 return static_cast<uint64_t>(statement->ReadInteger64(0)); |
| 0 | 758 } |
| 759 | |
| 760 | |
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761 OrthancPluginResourceType IndexBackend::GetResourceType(DatabaseManager& manager, |
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762 int64_t resourceId) |
| 0 | 763 { |
| 764 DatabaseManager::CachedStatement statement( | |
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765 STATEMENT_FROM_HERE, manager, |
| 0 | 766 "SELECT resourceType FROM Resources WHERE internalId=${id}"); |
| 767 | |
| 768 statement.SetReadOnly(true); | |
| 769 statement.SetParameterType("id", ValueType_Integer64); | |
| 770 | |
| 771 Dictionary args; | |
| 772 args.SetIntegerValue("id", resourceId); | |
| 773 | |
| 774 statement.Execute(args); | |
| 775 | |
| 776 if (statement.IsDone()) | |
| 777 { | |
| 778 throw Orthanc::OrthancException(Orthanc::ErrorCode_UnknownResource); | |
| 779 } | |
| 780 else | |
| 781 { | |
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782 return static_cast<OrthancPluginResourceType>(statement.ReadInteger32(0)); |
| 0 | 783 } |
| 784 } | |
| 785 | |
| 786 | |
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787 uint64_t IndexBackend::GetTotalCompressedSize(DatabaseManager& manager) |
| 0 | 788 { |
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789 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 790 |
| 791 // NB: "COALESCE" is used to replace "NULL" by "0" if the number of rows is empty | |
| 792 | |
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793 switch (manager.GetDialect()) |
| 0 | 794 { |
| 795 case Dialect_MySQL: | |
| 796 statement.reset(new DatabaseManager::CachedStatement( | |
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797 STATEMENT_FROM_HERE, manager, |
| 0 | 798 "SELECT CAST(COALESCE(SUM(compressedSize), 0) AS UNSIGNED INTEGER) FROM AttachedFiles")); |
| 799 break; | |
| 800 | |
| 801 case Dialect_PostgreSQL: | |
| 802 statement.reset(new DatabaseManager::CachedStatement( | |
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803 STATEMENT_FROM_HERE, manager, |
| 0 | 804 "SELECT CAST(COALESCE(SUM(compressedSize), 0) AS BIGINT) FROM AttachedFiles")); |
| 805 break; | |
| 806 | |
| 301 | 807 case Dialect_MSSQL: |
| 0 | 808 case Dialect_SQLite: |
| 809 statement.reset(new DatabaseManager::CachedStatement( | |
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810 STATEMENT_FROM_HERE, manager, |
| 0 | 811 "SELECT COALESCE(SUM(compressedSize), 0) FROM AttachedFiles")); |
| 812 break; | |
| 813 | |
| 814 default: | |
| 815 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 816 } | |
| 817 | |
| 818 statement->SetReadOnly(true); | |
| 819 statement->Execute(); | |
| 820 | |
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821 return static_cast<uint64_t>(statement->ReadInteger64(0)); |
| 0 | 822 } |
| 823 | |
| 824 | |
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825 uint64_t IndexBackend::GetTotalUncompressedSize(DatabaseManager& manager) |
| 0 | 826 { |
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827 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 828 |
| 829 // NB: "COALESCE" is used to replace "NULL" by "0" if the number of rows is empty | |
| 830 | |
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831 switch (manager.GetDialect()) |
| 0 | 832 { |
| 833 case Dialect_MySQL: | |
| 834 statement.reset(new DatabaseManager::CachedStatement( | |
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835 STATEMENT_FROM_HERE, manager, |
| 0 | 836 "SELECT CAST(COALESCE(SUM(uncompressedSize), 0) AS UNSIGNED INTEGER) FROM AttachedFiles")); |
| 837 break; | |
| 838 | |
| 839 case Dialect_PostgreSQL: | |
| 840 statement.reset(new DatabaseManager::CachedStatement( | |
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841 STATEMENT_FROM_HERE, manager, |
| 0 | 842 "SELECT CAST(COALESCE(SUM(uncompressedSize), 0) AS BIGINT) FROM AttachedFiles")); |
| 843 break; | |
| 844 | |
| 301 | 845 case Dialect_MSSQL: |
| 0 | 846 case Dialect_SQLite: |
| 847 statement.reset(new DatabaseManager::CachedStatement( | |
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848 STATEMENT_FROM_HERE, manager, |
| 0 | 849 "SELECT COALESCE(SUM(uncompressedSize), 0) FROM AttachedFiles")); |
| 850 break; | |
| 851 | |
| 852 default: | |
| 853 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 854 } | |
| 855 | |
| 856 statement->SetReadOnly(true); | |
| 857 statement->Execute(); | |
| 858 | |
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859 return static_cast<uint64_t>(statement->ReadInteger64(0)); |
| 0 | 860 } |
| 861 | |
| 862 | |
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863 bool IndexBackend::IsExistingResource(DatabaseManager& manager, |
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864 int64_t internalId) |
| 0 | 865 { |
| 866 DatabaseManager::CachedStatement statement( | |
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867 STATEMENT_FROM_HERE, manager, |
| 0 | 868 "SELECT * FROM Resources WHERE internalId=${id}"); |
| 869 | |
| 870 statement.SetReadOnly(true); | |
| 871 statement.SetParameterType("id", ValueType_Integer64); | |
| 872 | |
| 873 Dictionary args; | |
| 874 args.SetIntegerValue("id", internalId); | |
| 875 | |
| 876 statement.Execute(args); | |
| 877 | |
| 878 return !statement.IsDone(); | |
| 879 } | |
| 880 | |
| 881 | |
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882 bool IndexBackend::IsProtectedPatient(DatabaseManager& manager, |
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883 int64_t internalId) |
| 0 | 884 { |
| 885 DatabaseManager::CachedStatement statement( | |
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886 STATEMENT_FROM_HERE, manager, |
| 0 | 887 "SELECT * FROM PatientRecyclingOrder WHERE patientId = ${id}"); |
| 888 | |
| 889 statement.SetReadOnly(true); | |
| 890 statement.SetParameterType("id", ValueType_Integer64); | |
| 891 | |
| 892 Dictionary args; | |
| 893 args.SetIntegerValue("id", internalId); | |
| 894 | |
| 895 statement.Execute(args); | |
| 896 | |
| 897 return statement.IsDone(); | |
| 898 } | |
| 899 | |
| 900 | |
| 901 void IndexBackend::ListAvailableMetadata(std::list<int32_t>& target /*out*/, | |
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902 DatabaseManager& manager, |
| 0 | 903 int64_t id) |
| 904 { | |
| 905 DatabaseManager::CachedStatement statement( | |
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906 STATEMENT_FROM_HERE, manager, |
| 0 | 907 "SELECT type FROM Metadata WHERE id=${id}"); |
| 908 | |
| 909 statement.SetReadOnly(true); | |
| 910 statement.SetParameterType("id", ValueType_Integer64); | |
| 911 | |
| 912 Dictionary args; | |
| 913 args.SetIntegerValue("id", id); | |
| 914 | |
| 915 ReadListOfIntegers<int32_t>(target, statement, args); | |
| 916 } | |
| 917 | |
| 918 | |
| 919 void IndexBackend::ListAvailableAttachments(std::list<int32_t>& target /*out*/, | |
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920 DatabaseManager& manager, |
| 0 | 921 int64_t id) |
| 922 { | |
| 923 DatabaseManager::CachedStatement statement( | |
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924 STATEMENT_FROM_HERE, manager, |
| 0 | 925 "SELECT fileType FROM AttachedFiles WHERE id=${id}"); |
| 926 | |
| 927 statement.SetReadOnly(true); | |
| 928 statement.SetParameterType("id", ValueType_Integer64); | |
| 929 | |
| 930 Dictionary args; | |
| 931 args.SetIntegerValue("id", id); | |
| 932 | |
| 933 ReadListOfIntegers<int32_t>(target, statement, args); | |
| 934 } | |
| 935 | |
| 936 | |
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937 void IndexBackend::LogChange(DatabaseManager& manager, |
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938 int32_t changeType, |
| 209 | 939 int64_t resourceId, |
| 940 OrthancPluginResourceType resourceType, | |
| 941 const char* date) | |
| 0 | 942 { |
| 943 DatabaseManager::CachedStatement statement( | |
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944 STATEMENT_FROM_HERE, manager, |
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945 "INSERT INTO Changes VALUES(${AUTOINCREMENT} ${changeType}, ${id}, ${resourceType}, ${date})"); |
| 0 | 946 |
| 947 statement.SetParameterType("changeType", ValueType_Integer64); | |
| 948 statement.SetParameterType("id", ValueType_Integer64); | |
| 949 statement.SetParameterType("resourceType", ValueType_Integer64); | |
| 950 statement.SetParameterType("date", ValueType_Utf8String); | |
| 951 | |
| 952 Dictionary args; | |
| 209 | 953 args.SetIntegerValue("changeType", changeType); |
| 954 args.SetIntegerValue("id", resourceId); | |
| 955 args.SetIntegerValue("resourceType", resourceType); | |
| 956 args.SetUtf8Value("date", date); | |
| 0 | 957 |
| 958 statement.Execute(args); | |
| 959 } | |
| 960 | |
| 961 | |
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962 void IndexBackend::LogExportedResource(DatabaseManager& manager, |
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963 const OrthancPluginExportedResource& resource) |
| 0 | 964 { |
| 965 DatabaseManager::CachedStatement statement( | |
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966 STATEMENT_FROM_HERE, manager, |
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967 "INSERT INTO ExportedResources VALUES(${AUTOINCREMENT} ${type}, ${publicId}, " |
| 0 | 968 "${modality}, ${patient}, ${study}, ${series}, ${instance}, ${date})"); |
| 969 | |
| 970 statement.SetParameterType("type", ValueType_Integer64); | |
| 971 statement.SetParameterType("publicId", ValueType_Utf8String); | |
| 972 statement.SetParameterType("modality", ValueType_Utf8String); | |
| 973 statement.SetParameterType("patient", ValueType_Utf8String); | |
| 974 statement.SetParameterType("study", ValueType_Utf8String); | |
| 975 statement.SetParameterType("series", ValueType_Utf8String); | |
| 976 statement.SetParameterType("instance", ValueType_Utf8String); | |
| 977 statement.SetParameterType("date", ValueType_Utf8String); | |
| 978 | |
| 979 Dictionary args; | |
| 980 args.SetIntegerValue("type", resource.resourceType); | |
| 981 args.SetUtf8Value("publicId", resource.publicId); | |
| 982 args.SetUtf8Value("modality", resource.modality); | |
| 983 args.SetUtf8Value("patient", resource.patientId); | |
| 984 args.SetUtf8Value("study", resource.studyInstanceUid); | |
| 985 args.SetUtf8Value("series", resource.seriesInstanceUid); | |
| 986 args.SetUtf8Value("instance", resource.sopInstanceUid); | |
| 987 args.SetUtf8Value("date", resource.date); | |
| 988 | |
| 989 statement.Execute(args); | |
| 990 } | |
| 991 | |
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992 |
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993 static bool ExecuteLookupAttachment(DatabaseManager::CachedStatement& statement, |
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994 IDatabaseBackendOutput& output, |
|
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995 int64_t id, |
| 0 | 996 int32_t contentType) |
| 997 { | |
| 998 statement.SetReadOnly(true); | |
| 999 statement.SetParameterType("id", ValueType_Integer64); | |
| 1000 statement.SetParameterType("type", ValueType_Integer64); | |
| 1001 | |
| 1002 Dictionary args; | |
| 1003 args.SetIntegerValue("id", id); | |
| 1004 args.SetIntegerValue("type", static_cast<int>(contentType)); | |
| 1005 | |
| 1006 statement.Execute(args); | |
| 1007 | |
| 1008 if (statement.IsDone()) | |
| 1009 { | |
| 1010 return false; | |
| 1011 } | |
| 1012 else | |
| 1013 { | |
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1014 output.AnswerAttachment(statement.ReadString(0), |
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1015 contentType, |
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1016 statement.ReadInteger64(1), |
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1017 statement.ReadString(4), |
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1018 statement.ReadInteger32(2), |
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1019 statement.ReadInteger64(3), |
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1020 statement.ReadString(5)); |
| 0 | 1021 return true; |
| 1022 } | |
| 1023 } | |
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1024 |
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1025 |
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1026 |
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1027 /* Use GetOutput().AnswerAttachment() */ |
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1028 bool IndexBackend::LookupAttachment(IDatabaseBackendOutput& output, |
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1029 int64_t& revision /*out*/, |
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1030 DatabaseManager& manager, |
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1031 int64_t id, |
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1032 int32_t contentType) |
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1033 { |
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1034 if (HasRevisionsSupport()) |
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1035 { |
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1036 DatabaseManager::CachedStatement statement( |
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1037 STATEMENT_FROM_HERE, manager, |
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1038 "SELECT uuid, uncompressedSize, compressionType, compressedSize, uncompressedHash, " |
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1039 "compressedHash, revision FROM AttachedFiles WHERE id=${id} AND fileType=${type}"); |
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1040 |
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1041 if (ExecuteLookupAttachment(statement, output, id, contentType)) |
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1042 { |
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1043 if (statement.GetResultField(6).GetType() == ValueType_Null) |
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1044 { |
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1045 // "NULL" can happen with a database created by PostgreSQL |
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1046 // plugin <= 3.3 (because of "ALTER TABLE AttachedFiles") |
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1047 revision = 0; |
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1048 } |
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1049 else |
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1050 { |
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1051 revision = statement.ReadInteger64(6); |
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1052 } |
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1053 |
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1054 return true; |
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1055 } |
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1056 else |
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1057 { |
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1058 return false; |
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1059 } |
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1060 } |
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1061 else |
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1062 { |
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1063 DatabaseManager::CachedStatement statement( |
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1064 STATEMENT_FROM_HERE, manager, |
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1065 "SELECT uuid, uncompressedSize, compressionType, compressedSize, uncompressedHash, " |
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1066 "compressedHash FROM AttachedFiles WHERE id=${id} AND fileType=${type}"); |
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1067 |
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1068 revision = 0; |
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1069 |
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1070 return ExecuteLookupAttachment(statement, output, id, contentType); |
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1071 } |
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1072 } |
| 0 | 1073 |
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1074 |
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1075 static bool ReadGlobalProperty(std::string& target, |
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1076 DatabaseManager::CachedStatement& statement, |
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1077 const Dictionary& args) |
| 0 | 1078 { |
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1079 statement.Execute(args); |
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1080 statement.SetResultFieldType(0, ValueType_Utf8String); |
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1081 |
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1082 if (statement.IsDone()) |
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1083 { |
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1084 return false; |
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1085 } |
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1086 else |
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1087 { |
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1088 ValueType type = statement.GetResultField(0).GetType(); |
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1089 |
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1090 if (type == ValueType_Null) |
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1091 { |
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1092 return false; |
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1093 } |
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1094 else if (type != ValueType_Utf8String) |
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1095 { |
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1096 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); |
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1097 } |
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1098 else |
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1099 { |
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1100 target = dynamic_cast<const Utf8StringValue&>(statement.GetResultField(0)).GetContent(); |
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1101 return true; |
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1102 } |
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1103 } |
| 0 | 1104 } |
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1105 |
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1106 |
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1107 bool IndexBackend::LookupGlobalProperty(std::string& target /*out*/, |
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1108 DatabaseManager& manager, |
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1109 const char* serverIdentifier, |
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1110 int32_t property) |
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1111 { |
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1112 if (serverIdentifier == NULL) |
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1113 { |
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1114 throw Orthanc::OrthancException(Orthanc::ErrorCode_NullPointer); |
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1115 } |
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1116 else |
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1117 { |
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1118 if (strlen(serverIdentifier) == 0) |
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1119 { |
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1120 DatabaseManager::CachedStatement statement( |
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1121 STATEMENT_FROM_HERE, manager, |
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1122 "SELECT value FROM GlobalProperties WHERE property=${property}"); |
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1123 |
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1124 statement.SetReadOnly(true); |
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1125 statement.SetParameterType("property", ValueType_Integer64); |
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1126 |
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1127 Dictionary args; |
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1128 args.SetIntegerValue("property", property); |
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1129 |
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1130 return ReadGlobalProperty(target, statement, args); |
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1131 } |
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1132 else |
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1133 { |
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1134 DatabaseManager::CachedStatement statement( |
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1135 STATEMENT_FROM_HERE, manager, |
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1136 "SELECT value FROM ServerProperties WHERE server=${server} AND property=${property}"); |
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1137 |
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1138 statement.SetReadOnly(true); |
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1139 statement.SetParameterType("server", ValueType_Utf8String); |
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1140 statement.SetParameterType("property", ValueType_Integer64); |
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1141 |
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1142 Dictionary args; |
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1143 args.SetUtf8Value("server", serverIdentifier); |
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1144 args.SetIntegerValue("property", property); |
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1145 |
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1146 return ReadGlobalProperty(target, statement, args); |
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1147 } |
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1148 } |
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1149 } |
| 0 | 1150 |
| 1151 | |
| 1152 void IndexBackend::LookupIdentifier(std::list<int64_t>& target /*out*/, | |
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1153 DatabaseManager& manager, |
| 0 | 1154 OrthancPluginResourceType resourceType, |
| 1155 uint16_t group, | |
| 1156 uint16_t element, | |
| 1157 OrthancPluginIdentifierConstraint constraint, | |
| 1158 const char* value) | |
| 1159 { | |
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1160 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 1161 |
| 1162 std::string header = | |
| 1163 "SELECT d.id FROM DicomIdentifiers AS d, Resources AS r WHERE " | |
| 1164 "d.id = r.internalId AND r.resourceType=${type} AND d.tagGroup=${group} " | |
| 1165 "AND d.tagElement=${element} AND "; | |
| 1166 | |
| 1167 switch (constraint) | |
| 1168 { | |
| 1169 case OrthancPluginIdentifierConstraint_Equal: | |
| 1170 header += "d.value = ${value}"; | |
| 1171 statement.reset(new DatabaseManager::CachedStatement( | |
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1172 STATEMENT_FROM_HERE, manager, header.c_str())); |
| 0 | 1173 break; |
| 1174 | |
| 1175 case OrthancPluginIdentifierConstraint_SmallerOrEqual: | |
| 1176 header += "d.value <= ${value}"; | |
| 1177 statement.reset(new DatabaseManager::CachedStatement( | |
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1178 STATEMENT_FROM_HERE, manager, header.c_str())); |
| 0 | 1179 break; |
| 1180 | |
| 1181 case OrthancPluginIdentifierConstraint_GreaterOrEqual: | |
| 1182 header += "d.value >= ${value}"; | |
| 1183 statement.reset(new DatabaseManager::CachedStatement( | |
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1184 STATEMENT_FROM_HERE, manager, header.c_str())); |
| 0 | 1185 break; |
| 1186 | |
| 1187 case OrthancPluginIdentifierConstraint_Wildcard: | |
| 1188 header += "d.value LIKE ${value}"; | |
| 1189 statement.reset(new DatabaseManager::CachedStatement( | |
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1190 STATEMENT_FROM_HERE, manager, header.c_str())); |
| 0 | 1191 break; |
| 1192 | |
| 1193 default: | |
| 1194 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); | |
| 1195 } | |
| 1196 | |
| 1197 statement->SetReadOnly(true); | |
| 1198 statement->SetParameterType("type", ValueType_Integer64); | |
| 1199 statement->SetParameterType("group", ValueType_Integer64); | |
| 1200 statement->SetParameterType("element", ValueType_Integer64); | |
| 1201 statement->SetParameterType("value", ValueType_Utf8String); | |
| 1202 | |
| 1203 Dictionary args; | |
| 1204 args.SetIntegerValue("type", resourceType); | |
| 1205 args.SetIntegerValue("group", group); | |
| 1206 args.SetIntegerValue("element", element); | |
| 1207 | |
| 1208 if (constraint == OrthancPluginIdentifierConstraint_Wildcard) | |
| 1209 { | |
| 1210 args.SetUtf8Value("value", ConvertWildcardToLike(value)); | |
| 1211 } | |
| 1212 else | |
| 1213 { | |
| 1214 args.SetUtf8Value("value", value); | |
| 1215 } | |
| 1216 | |
| 1217 statement->Execute(args); | |
| 1218 | |
| 1219 target.clear(); | |
| 1220 while (!statement->IsDone()) | |
| 1221 { | |
|
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1222 target.push_back(statement->ReadInteger64(0)); |
| 0 | 1223 statement->Next(); |
| 1224 } | |
| 1225 } | |
| 1226 | |
| 1227 | |
| 1228 void IndexBackend::LookupIdentifierRange(std::list<int64_t>& target /*out*/, | |
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1229 DatabaseManager& manager, |
| 0 | 1230 OrthancPluginResourceType resourceType, |
| 1231 uint16_t group, | |
| 1232 uint16_t element, | |
| 1233 const char* start, | |
| 1234 const char* end) | |
| 1235 { | |
| 1236 DatabaseManager::CachedStatement statement( | |
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1237 STATEMENT_FROM_HERE, manager, |
| 0 | 1238 "SELECT d.id FROM DicomIdentifiers AS d, Resources AS r WHERE " |
| 1239 "d.id = r.internalId AND r.resourceType=${type} AND d.tagGroup=${group} " | |
| 1240 "AND d.tagElement=${element} AND d.value>=${start} AND d.value<=${end}"); | |
| 1241 | |
| 1242 statement.SetReadOnly(true); | |
| 1243 statement.SetParameterType("type", ValueType_Integer64); | |
| 1244 statement.SetParameterType("group", ValueType_Integer64); | |
| 1245 statement.SetParameterType("element", ValueType_Integer64); | |
| 1246 statement.SetParameterType("start", ValueType_Utf8String); | |
| 1247 statement.SetParameterType("end", ValueType_Utf8String); | |
| 1248 | |
| 1249 Dictionary args; | |
| 1250 args.SetIntegerValue("type", resourceType); | |
| 1251 args.SetIntegerValue("group", group); | |
| 1252 args.SetIntegerValue("element", element); | |
| 1253 args.SetUtf8Value("start", start); | |
| 1254 args.SetUtf8Value("end", end); | |
| 1255 | |
| 1256 statement.Execute(args); | |
| 1257 | |
| 1258 target.clear(); | |
| 1259 while (!statement.IsDone()) | |
| 1260 { | |
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1261 target.push_back(statement.ReadInteger64(0)); |
| 0 | 1262 statement.Next(); |
| 1263 } | |
| 1264 } | |
| 1265 | |
| 1266 | |
| 1267 bool IndexBackend::LookupMetadata(std::string& target /*out*/, | |
|
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1268 int64_t& revision /*out*/, |
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1269 DatabaseManager& manager, |
| 0 | 1270 int64_t id, |
| 1271 int32_t metadataType) | |
| 1272 { | |
|
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1273 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
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1274 |
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1275 if (HasRevisionsSupport()) |
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1276 { |
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1277 statement.reset(new DatabaseManager::CachedStatement( |
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1278 STATEMENT_FROM_HERE, manager, |
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1279 "SELECT value, revision FROM Metadata WHERE id=${id} and type=${type}")); |
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1280 } |
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1281 else |
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1282 { |
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1283 statement.reset(new DatabaseManager::CachedStatement( |
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1284 STATEMENT_FROM_HERE, manager, |
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1285 "SELECT value FROM Metadata WHERE id=${id} and type=${type}")); |
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1286 } |
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1287 |
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1288 statement->SetReadOnly(true); |
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1289 statement->SetParameterType("id", ValueType_Integer64); |
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1290 statement->SetParameterType("type", ValueType_Integer64); |
| 0 | 1291 |
| 1292 Dictionary args; | |
| 1293 args.SetIntegerValue("id", id); | |
| 1294 args.SetIntegerValue("type", metadataType); | |
| 1295 | |
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1296 statement->Execute(args); |
| 0 | 1297 |
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1298 if (statement->IsDone()) |
| 0 | 1299 { |
| 1300 return false; | |
| 1301 } | |
| 1302 else | |
| 1303 { | |
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1304 target = statement->ReadString(0); |
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1305 |
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1306 if (HasRevisionsSupport()) |
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1307 { |
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1308 if (statement->GetResultField(1).GetType() == ValueType_Null) |
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1309 { |
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1310 // "NULL" can happen with a database created by PostgreSQL |
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1311 // plugin <= 3.3 (because of "ALTER TABLE AttachedFiles") |
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1312 revision = 0; |
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1313 } |
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1314 else |
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1315 { |
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1316 revision = statement->ReadInteger64(1); |
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1317 } |
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1318 } |
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1319 else |
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1320 { |
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1321 revision = 0; // No support for revisions |
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1322 } |
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1323 |
| 0 | 1324 return true; |
| 1325 } | |
| 1326 } | |
| 1327 | |
| 1328 | |
| 1329 bool IndexBackend::LookupParent(int64_t& parentId /*out*/, | |
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1330 DatabaseManager& manager, |
| 0 | 1331 int64_t resourceId) |
| 1332 { | |
| 1333 DatabaseManager::CachedStatement statement( | |
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1334 STATEMENT_FROM_HERE, manager, |
| 0 | 1335 "SELECT parentId FROM Resources WHERE internalId=${id}"); |
| 1336 | |
| 1337 statement.SetReadOnly(true); | |
| 1338 statement.SetParameterType("id", ValueType_Integer64); | |
| 1339 | |
| 1340 Dictionary args; | |
| 1341 args.SetIntegerValue("id", resourceId); | |
| 1342 | |
| 1343 statement.Execute(args); | |
| 1344 | |
| 1345 if (statement.IsDone() || | |
| 1346 statement.GetResultField(0).GetType() == ValueType_Null) | |
| 1347 { | |
| 1348 return false; | |
| 1349 } | |
| 1350 else | |
| 1351 { | |
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1352 parentId = statement.ReadInteger64(0); |
| 0 | 1353 return true; |
| 1354 } | |
| 1355 } | |
| 1356 | |
| 1357 | |
| 1358 bool IndexBackend::LookupResource(int64_t& id /*out*/, | |
| 1359 OrthancPluginResourceType& type /*out*/, | |
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1360 DatabaseManager& manager, |
| 0 | 1361 const char* publicId) |
| 1362 { | |
| 1363 DatabaseManager::CachedStatement statement( | |
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1364 STATEMENT_FROM_HERE, manager, |
| 0 | 1365 "SELECT internalId, resourceType FROM Resources WHERE publicId=${id}"); |
| 1366 | |
| 1367 statement.SetReadOnly(true); | |
| 1368 statement.SetParameterType("id", ValueType_Utf8String); | |
| 1369 | |
| 1370 Dictionary args; | |
| 1371 args.SetUtf8Value("id", publicId); | |
| 1372 | |
| 1373 statement.Execute(args); | |
| 1374 | |
| 1375 if (statement.IsDone()) | |
| 1376 { | |
| 1377 return false; | |
| 1378 } | |
| 1379 else | |
| 1380 { | |
|
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1381 id = statement.ReadInteger64(0); |
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1382 type = static_cast<OrthancPluginResourceType>(statement.ReadInteger32(1)); |
| 0 | 1383 return true; |
| 1384 } | |
| 1385 } | |
| 1386 | |
| 1387 | |
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1388 bool IndexBackend::SelectPatientToRecycle(int64_t& internalId /*out*/, |
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1389 DatabaseManager& manager) |
| 0 | 1390 { |
| 1391 DatabaseManager::CachedStatement statement( | |
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1392 STATEMENT_FROM_HERE, manager, |
| 0 | 1393 "SELECT patientId FROM PatientRecyclingOrder ORDER BY seq ASC LIMIT 1"); |
| 1394 | |
| 1395 statement.SetReadOnly(true); | |
| 1396 statement.Execute(); | |
| 1397 | |
| 1398 if (statement.IsDone()) | |
| 1399 { | |
| 1400 return false; | |
| 1401 } | |
| 1402 else | |
| 1403 { | |
|
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1404 internalId = statement.ReadInteger64(0); |
| 0 | 1405 return true; |
| 1406 } | |
| 1407 } | |
| 1408 | |
| 1409 | |
| 1410 bool IndexBackend::SelectPatientToRecycle(int64_t& internalId /*out*/, | |
|
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1411 DatabaseManager& manager, |
| 0 | 1412 int64_t patientIdToAvoid) |
| 1413 { | |
| 1414 DatabaseManager::CachedStatement statement( | |
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1415 STATEMENT_FROM_HERE, manager, |
| 0 | 1416 "SELECT patientId FROM PatientRecyclingOrder " |
| 1417 "WHERE patientId != ${id} ORDER BY seq ASC LIMIT 1"); | |
| 1418 | |
| 1419 statement.SetReadOnly(true); | |
| 1420 statement.SetParameterType("id", ValueType_Integer64); | |
| 1421 | |
| 1422 Dictionary args; | |
| 1423 args.SetIntegerValue("id", patientIdToAvoid); | |
| 1424 | |
| 1425 statement.Execute(args); | |
| 1426 | |
| 1427 if (statement.IsDone()) | |
| 1428 { | |
| 1429 return false; | |
| 1430 } | |
| 1431 else | |
| 1432 { | |
|
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1433 internalId = statement.ReadInteger64(0); |
| 0 | 1434 return true; |
| 1435 } | |
| 1436 } | |
| 1437 | |
|
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1438 |
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1439 static void RunSetGlobalPropertyStatement(DatabaseManager::CachedStatement& statement, |
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1440 bool hasServer, |
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1441 bool hasValue, |
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1442 const char* serverIdentifier, |
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1443 int32_t property, |
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1444 const char* utf8) |
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1445 { |
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1446 Dictionary args; |
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1447 |
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1448 statement.SetParameterType("property", ValueType_Integer64); |
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1449 args.SetIntegerValue("property", static_cast<int>(property)); |
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1450 |
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1451 if (hasValue) |
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1452 { |
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1453 assert(utf8 != NULL); |
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1454 statement.SetParameterType("value", ValueType_Utf8String); |
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1455 args.SetUtf8Value("value", utf8); |
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1456 } |
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1457 else |
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1458 { |
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1459 assert(utf8 == NULL); |
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1460 } |
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1461 |
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1462 if (hasServer) |
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1463 { |
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1464 assert(serverIdentifier != NULL && strlen(serverIdentifier) > 0); |
|
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1465 statement.SetParameterType("server", ValueType_Utf8String); |
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1466 args.SetUtf8Value("server", serverIdentifier); |
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1467 } |
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1468 else |
|
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1469 { |
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1470 assert(serverIdentifier == NULL); |
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1471 } |
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1472 |
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1473 statement.Execute(args); |
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1474 } |
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1475 |
| 0 | 1476 |
|
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1477 void IndexBackend::SetGlobalProperty(DatabaseManager& manager, |
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1478 const char* serverIdentifier, |
|
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1479 int32_t property, |
|
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1480 const char* utf8) |
| 0 | 1481 { |
|
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1482 if (serverIdentifier == NULL) |
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1483 { |
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1484 throw Orthanc::OrthancException(Orthanc::ErrorCode_NullPointer); |
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1485 } |
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1486 else if (manager.GetDialect() == Dialect_SQLite) |
|
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1487 { |
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1488 bool hasServer = (strlen(serverIdentifier) != 0); |
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1489 |
|
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1490 if (hasServer) |
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1491 { |
|
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1492 DatabaseManager::CachedStatement statement( |
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1493 STATEMENT_FROM_HERE, manager, |
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1494 "INSERT OR REPLACE INTO ServerProperties VALUES (${server}, ${property}, ${value})"); |
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1495 |
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1496 RunSetGlobalPropertyStatement(statement, true, true, serverIdentifier, property, utf8); |
|
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1497 } |
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1498 else |
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1499 { |
|
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1500 DatabaseManager::CachedStatement statement( |
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1501 STATEMENT_FROM_HERE, manager, |
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1502 "INSERT OR REPLACE INTO GlobalProperties VALUES (${property}, ${value})"); |
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1503 |
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1504 RunSetGlobalPropertyStatement(statement, false, true, NULL, property, utf8); |
|
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1505 } |
|
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1506 } |
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1507 else |
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1508 { |
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1509 bool hasServer = (strlen(serverIdentifier) != 0); |
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1510 |
|
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1511 if (hasServer) |
|
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1512 { |
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1513 { |
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|
1514 DatabaseManager::CachedStatement statement( |
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1515 STATEMENT_FROM_HERE, manager, |
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1516 "DELETE FROM ServerProperties WHERE server=${server} AND property=${property}"); |
|
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1517 |
|
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1518 RunSetGlobalPropertyStatement(statement, true, false, serverIdentifier, property, NULL); |
|
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1519 } |
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1520 |
|
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1521 { |
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1522 DatabaseManager::CachedStatement statement( |
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1523 STATEMENT_FROM_HERE, manager, |
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1524 "INSERT INTO ServerProperties VALUES (${server}, ${property}, ${value})"); |
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1525 |
|
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1526 RunSetGlobalPropertyStatement(statement, true, true, serverIdentifier, property, utf8); |
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1527 } |
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1528 } |
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1529 else |
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1530 { |
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1531 { |
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|
1532 DatabaseManager::CachedStatement statement( |
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|
1533 STATEMENT_FROM_HERE, manager, |
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1534 "DELETE FROM GlobalProperties WHERE property=${property}"); |
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1535 |
|
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1536 RunSetGlobalPropertyStatement(statement, false, false, NULL, property, NULL); |
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1537 } |
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1538 |
|
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1539 { |
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|
1540 DatabaseManager::CachedStatement statement( |
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|
1541 STATEMENT_FROM_HERE, manager, |
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|
1542 "INSERT INTO GlobalProperties VALUES (${property}, ${value})"); |
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1543 |
|
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|
1544 RunSetGlobalPropertyStatement(statement, false, true, NULL, property, utf8); |
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1545 } |
|
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1546 } |
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|
1547 } |
| 0 | 1548 } |
| 1549 | |
| 1550 | |
| 1551 static void ExecuteSetTag(DatabaseManager::CachedStatement& statement, | |
| 1552 int64_t id, | |
| 1553 uint16_t group, | |
| 1554 uint16_t element, | |
| 1555 const char* value) | |
| 1556 { | |
| 1557 statement.SetParameterType("id", ValueType_Integer64); | |
| 1558 statement.SetParameterType("group", ValueType_Integer64); | |
| 1559 statement.SetParameterType("element", ValueType_Integer64); | |
| 1560 statement.SetParameterType("value", ValueType_Utf8String); | |
| 1561 | |
| 1562 Dictionary args; | |
| 1563 args.SetIntegerValue("id", id); | |
| 1564 args.SetIntegerValue("group", group); | |
| 1565 args.SetIntegerValue("element", element); | |
| 1566 args.SetUtf8Value("value", value); | |
| 1567 | |
| 1568 statement.Execute(args); | |
| 1569 } | |
| 1570 | |
| 1571 | |
|
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1572 void IndexBackend::SetMainDicomTag(DatabaseManager& manager, |
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1573 int64_t id, |
| 0 | 1574 uint16_t group, |
| 1575 uint16_t element, | |
| 1576 const char* value) | |
| 1577 { | |
| 1578 DatabaseManager::CachedStatement statement( | |
|
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1579 STATEMENT_FROM_HERE, manager, |
| 0 | 1580 "INSERT INTO MainDicomTags VALUES(${id}, ${group}, ${element}, ${value})"); |
| 1581 | |
| 1582 ExecuteSetTag(statement, id, group, element, value); | |
| 1583 } | |
| 1584 | |
| 1585 | |
|
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1586 void IndexBackend::SetIdentifierTag(DatabaseManager& manager, |
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1587 int64_t id, |
| 0 | 1588 uint16_t group, |
| 1589 uint16_t element, | |
| 1590 const char* value) | |
| 1591 { | |
| 1592 DatabaseManager::CachedStatement statement( | |
|
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1593 STATEMENT_FROM_HERE, manager, |
| 0 | 1594 "INSERT INTO DicomIdentifiers VALUES(${id}, ${group}, ${element}, ${value})"); |
| 1595 | |
| 1596 ExecuteSetTag(statement, id, group, element, value); | |
| 1597 } | |
| 1598 | |
|
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1599 |
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1600 static void ExecuteSetMetadata(DatabaseManager::CachedStatement& statement, |
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1601 Dictionary& args, |
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1602 int64_t id, |
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1603 int32_t metadataType, |
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1604 const char* value) |
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1605 { |
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1606 statement.SetParameterType("id", ValueType_Integer64); |
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1607 statement.SetParameterType("type", ValueType_Integer64); |
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1608 statement.SetParameterType("value", ValueType_Utf8String); |
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1609 |
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1610 args.SetIntegerValue("id", id); |
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1611 args.SetIntegerValue("type", metadataType); |
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1612 args.SetUtf8Value("value", value); |
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1613 |
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1614 statement.Execute(args); |
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1615 } |
| 0 | 1616 |
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1617 void IndexBackend::SetMetadata(DatabaseManager& manager, |
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1618 int64_t id, |
| 0 | 1619 int32_t metadataType, |
|
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1620 const char* value, |
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1621 int64_t revision) |
| 0 | 1622 { |
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1623 if (manager.GetDialect() == Dialect_SQLite) |
| 0 | 1624 { |
|
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1625 assert(HasRevisionsSupport()); |
| 0 | 1626 DatabaseManager::CachedStatement statement( |
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1627 STATEMENT_FROM_HERE, manager, |
|
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1628 "INSERT OR REPLACE INTO Metadata VALUES (${id}, ${type}, ${value}, ${revision})"); |
| 0 | 1629 |
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1630 Dictionary args; |
|
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1631 statement.SetParameterType("revision", ValueType_Integer64); |
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1632 args.SetIntegerValue("revision", revision); |
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1633 |
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1634 ExecuteSetMetadata(statement, args, id, metadataType, value); |
| 0 | 1635 } |
| 1636 else | |
| 1637 { | |
| 1638 { | |
| 1639 DatabaseManager::CachedStatement statement( | |
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1640 STATEMENT_FROM_HERE, manager, |
| 0 | 1641 "DELETE FROM Metadata WHERE id=${id} AND type=${type}"); |
| 1642 | |
| 1643 statement.SetParameterType("id", ValueType_Integer64); | |
| 1644 statement.SetParameterType("type", ValueType_Integer64); | |
| 1645 | |
| 1646 Dictionary args; | |
| 1647 args.SetIntegerValue("id", id); | |
| 1648 args.SetIntegerValue("type", metadataType); | |
| 1649 | |
| 1650 statement.Execute(args); | |
| 1651 } | |
| 1652 | |
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1653 if (HasRevisionsSupport()) |
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1654 { |
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1655 DatabaseManager::CachedStatement statement( |
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1656 STATEMENT_FROM_HERE, manager, |
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1657 "INSERT INTO Metadata VALUES (${id}, ${type}, ${value}, ${revision})"); |
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1658 |
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1659 Dictionary args; |
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1660 statement.SetParameterType("revision", ValueType_Integer64); |
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1661 args.SetIntegerValue("revision", revision); |
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1662 |
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1663 ExecuteSetMetadata(statement, args, id, metadataType, value); |
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1664 } |
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1665 else |
| 0 | 1666 { |
| 1667 DatabaseManager::CachedStatement statement( | |
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1668 STATEMENT_FROM_HERE, manager, |
| 0 | 1669 "INSERT INTO Metadata VALUES (${id}, ${type}, ${value})"); |
| 1670 | |
| 1671 Dictionary args; | |
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1672 ExecuteSetMetadata(statement, args, id, metadataType, value); |
| 0 | 1673 } |
| 1674 } | |
| 1675 } | |
| 1676 | |
| 1677 | |
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1678 void IndexBackend::SetProtectedPatient(DatabaseManager& manager, |
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1679 int64_t internalId, |
| 0 | 1680 bool isProtected) |
| 1681 { | |
| 1682 if (isProtected) | |
| 1683 { | |
| 1684 DatabaseManager::CachedStatement statement( | |
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1685 STATEMENT_FROM_HERE, manager, |
| 0 | 1686 "DELETE FROM PatientRecyclingOrder WHERE patientId=${id}"); |
| 1687 | |
| 1688 statement.SetParameterType("id", ValueType_Integer64); | |
| 1689 | |
| 1690 Dictionary args; | |
| 1691 args.SetIntegerValue("id", internalId); | |
| 1692 | |
| 1693 statement.Execute(args); | |
| 1694 } | |
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1695 else if (IsProtectedPatient(manager, internalId)) |
| 0 | 1696 { |
| 1697 DatabaseManager::CachedStatement statement( | |
|
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1698 STATEMENT_FROM_HERE, manager, |
|
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1699 "INSERT INTO PatientRecyclingOrder VALUES(${AUTOINCREMENT} ${id})"); |
| 0 | 1700 |
| 1701 statement.SetParameterType("id", ValueType_Integer64); | |
| 1702 | |
| 1703 Dictionary args; | |
| 1704 args.SetIntegerValue("id", internalId); | |
| 1705 | |
| 1706 statement.Execute(args); | |
| 1707 } | |
| 1708 else | |
| 1709 { | |
| 1710 // Nothing to do: The patient is already unprotected | |
| 1711 } | |
| 1712 } | |
| 1713 | |
| 1714 | |
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1715 uint32_t IndexBackend::GetDatabaseVersion(DatabaseManager& manager) |
| 0 | 1716 { |
|
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1717 // Create a read-only, explicit transaction to read the database |
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1718 // version (this was a read-write, implicit transaction in |
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1719 // PostgreSQL plugin <= 3.3 and MySQL plugin <= 3.0) |
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1720 DatabaseManager::Transaction transaction(manager, TransactionType_ReadOnly); |
|
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1721 |
| 0 | 1722 std::string version = "unknown"; |
| 1723 | |
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1724 if (LookupGlobalProperty(version, manager, MISSING_SERVER_IDENTIFIER, Orthanc::GlobalProperty_DatabaseSchemaVersion)) |
| 0 | 1725 { |
| 1726 try | |
| 1727 { | |
| 1728 return boost::lexical_cast<unsigned int>(version); | |
| 1729 } | |
| 1730 catch (boost::bad_lexical_cast&) | |
| 1731 { | |
| 1732 } | |
| 1733 } | |
| 1734 | |
| 1735 LOG(ERROR) << "The database is corrupted. Drop it manually for Orthanc to recreate it"; | |
| 1736 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); | |
| 1737 } | |
| 1738 | |
| 1739 | |
| 1740 /** | |
| 1741 * Upgrade the database to the specified version of the database | |
| 1742 * schema. The upgrade script is allowed to make calls to | |
| 1743 * OrthancPluginReconstructMainDicomTags(). | |
| 1744 **/ | |
|
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1745 void IndexBackend::UpgradeDatabase(DatabaseManager& manager, |
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1746 uint32_t targetVersion, |
| 0 | 1747 OrthancPluginStorageArea* storageArea) |
| 1748 { | |
| 1749 LOG(ERROR) << "Upgrading database is not implemented by this plugin"; | |
| 1750 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 1751 } | |
| 1752 | |
| 1753 | |
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1754 void IndexBackend::ClearMainDicomTags(DatabaseManager& manager, |
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1755 int64_t internalId) |
| 0 | 1756 { |
| 1757 { | |
| 1758 DatabaseManager::CachedStatement statement( | |
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1759 STATEMENT_FROM_HERE, manager, |
| 0 | 1760 "DELETE FROM MainDicomTags WHERE id=${id}"); |
| 1761 | |
| 1762 statement.SetParameterType("id", ValueType_Integer64); | |
| 1763 | |
| 1764 Dictionary args; | |
| 1765 args.SetIntegerValue("id", internalId); | |
| 1766 | |
| 1767 statement.Execute(args); | |
| 1768 } | |
| 1769 | |
| 1770 { | |
| 1771 DatabaseManager::CachedStatement statement( | |
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1772 STATEMENT_FROM_HERE, manager, |
| 0 | 1773 "DELETE FROM DicomIdentifiers WHERE id=${id}"); |
| 1774 | |
| 1775 statement.SetParameterType("id", ValueType_Integer64); | |
| 1776 | |
| 1777 Dictionary args; | |
| 1778 args.SetIntegerValue("id", internalId); | |
| 1779 | |
| 1780 statement.Execute(args); | |
| 1781 } | |
| 1782 } | |
| 1783 | |
| 1784 | |
| 1785 // For unit testing only! | |
|
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1786 uint64_t IndexBackend::GetAllResourcesCount(DatabaseManager& manager) |
| 0 | 1787 { |
|
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1788 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 1789 |
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1790 switch (manager.GetDialect()) |
| 0 | 1791 { |
| 1792 case Dialect_MySQL: | |
| 1793 statement.reset(new DatabaseManager::CachedStatement( | |
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1794 STATEMENT_FROM_HERE, manager, |
| 0 | 1795 "SELECT CAST(COUNT(*) AS UNSIGNED INT) FROM Resources")); |
| 1796 break; | |
| 1797 | |
| 1798 case Dialect_PostgreSQL: | |
| 1799 statement.reset(new DatabaseManager::CachedStatement( | |
|
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1800 STATEMENT_FROM_HERE, manager, |
| 0 | 1801 "SELECT CAST(COUNT(*) AS BIGINT) FROM Resources")); |
| 1802 break; | |
| 1803 | |
| 1804 case Dialect_SQLite: | |
| 301 | 1805 case Dialect_MSSQL: |
| 0 | 1806 statement.reset(new DatabaseManager::CachedStatement( |
|
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1807 STATEMENT_FROM_HERE, manager, |
| 0 | 1808 "SELECT COUNT(*) FROM Resources")); |
| 1809 break; | |
| 1810 | |
| 1811 default: | |
| 1812 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 1813 } | |
| 1814 | |
| 1815 statement->SetReadOnly(true); | |
| 1816 statement->Execute(); | |
| 1817 | |
|
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1818 return static_cast<uint64_t>(statement->ReadInteger64(0)); |
| 0 | 1819 } |
| 1820 | |
| 1821 | |
| 1822 // For unit testing only! | |
|
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1823 uint64_t IndexBackend::GetUnprotectedPatientsCount(DatabaseManager& manager) |
| 0 | 1824 { |
|
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1825 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 1826 |
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1827 switch (manager.GetDialect()) |
| 0 | 1828 { |
| 1829 case Dialect_MySQL: | |
| 1830 statement.reset(new DatabaseManager::CachedStatement( | |
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1831 STATEMENT_FROM_HERE, manager, |
| 0 | 1832 "SELECT CAST(COUNT(*) AS UNSIGNED INT) FROM PatientRecyclingOrder")); |
| 1833 break; | |
| 1834 | |
| 1835 case Dialect_PostgreSQL: | |
| 1836 statement.reset(new DatabaseManager::CachedStatement( | |
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1837 STATEMENT_FROM_HERE, manager, |
| 0 | 1838 "SELECT CAST(COUNT(*) AS BIGINT) FROM PatientRecyclingOrder")); |
| 1839 break; | |
| 1840 | |
| 1841 case Dialect_SQLite: | |
| 1842 statement.reset(new DatabaseManager::CachedStatement( | |
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1843 STATEMENT_FROM_HERE, manager, |
| 0 | 1844 "SELECT COUNT(*) FROM PatientRecyclingOrder")); |
| 1845 break; | |
| 1846 | |
| 1847 default: | |
| 1848 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 1849 } | |
| 1850 | |
| 1851 statement->SetReadOnly(true); | |
| 1852 statement->Execute(); | |
| 1853 | |
|
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1854 return static_cast<uint64_t>(statement->ReadInteger64(0)); |
| 0 | 1855 } |
| 1856 | |
| 1857 | |
| 1858 // For unit testing only! | |
| 1859 bool IndexBackend::GetParentPublicId(std::string& target, | |
|
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1860 DatabaseManager& manager, |
| 0 | 1861 int64_t id) |
| 1862 { | |
| 1863 DatabaseManager::CachedStatement statement( | |
|
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1864 STATEMENT_FROM_HERE, manager, |
| 0 | 1865 "SELECT a.publicId FROM Resources AS a, Resources AS b " |
| 1866 "WHERE a.internalId = b.parentId AND b.internalId = ${id}"); | |
| 1867 | |
| 1868 statement.SetReadOnly(true); | |
| 1869 statement.SetParameterType("id", ValueType_Integer64); | |
| 1870 | |
| 1871 Dictionary args; | |
| 1872 args.SetIntegerValue("id", id); | |
| 1873 | |
| 1874 statement.Execute(args); | |
| 1875 | |
| 1876 if (statement.IsDone()) | |
| 1877 { | |
| 1878 return false; | |
| 1879 } | |
| 1880 else | |
| 1881 { | |
|
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1882 target = statement.ReadString(0); |
| 0 | 1883 return true; |
| 1884 } | |
| 1885 } | |
| 1886 | |
| 1887 | |
| 1888 // For unit tests only! | |
| 1889 void IndexBackend::GetChildren(std::list<std::string>& childrenPublicIds, | |
|
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1890 DatabaseManager& manager, |
| 0 | 1891 int64_t id) |
| 1892 { | |
| 1893 DatabaseManager::CachedStatement statement( | |
|
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1894 STATEMENT_FROM_HERE, manager, |
| 0 | 1895 "SELECT publicId FROM Resources WHERE parentId=${id}"); |
| 1896 | |
| 1897 statement.SetReadOnly(true); | |
| 1898 statement.SetParameterType("id", ValueType_Integer64); | |
| 1899 | |
| 1900 Dictionary args; | |
| 1901 args.SetIntegerValue("id", id); | |
| 1902 | |
| 1903 ReadListOfStrings(childrenPublicIds, statement, args); | |
| 1904 } | |
|
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1905 |
|
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1906 |
| 78 | 1907 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1 |
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1908 class IndexBackend::LookupFormatter : public Orthanc::ISqlLookupFormatter |
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1909 { |
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1910 private: |
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1911 Dialect dialect_; |
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1912 size_t count_; |
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1913 Dictionary dictionary_; |
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1914 |
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1915 static std::string FormatParameter(size_t index) |
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1916 { |
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1917 return "p" + boost::lexical_cast<std::string>(index); |
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1918 } |
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1919 |
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1920 public: |
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1921 LookupFormatter(Dialect dialect) : |
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1922 dialect_(dialect), |
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1923 count_(0) |
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1924 { |
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1925 } |
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1926 |
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1927 virtual std::string GenerateParameter(const std::string& value) |
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1928 { |
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1929 const std::string key = FormatParameter(count_); |
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1930 |
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1931 count_ ++; |
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1932 dictionary_.SetUtf8Value(key, value); |
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1933 |
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1934 return "${" + key + "}"; |
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1935 } |
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1936 |
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1937 virtual std::string FormatResourceType(Orthanc::ResourceType level) |
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1938 { |
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1939 return boost::lexical_cast<std::string>(Orthanc::Plugins::Convert(level)); |
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1940 } |
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1941 |
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1942 virtual std::string FormatWildcardEscape() |
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1943 { |
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1944 switch (dialect_) |
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1945 { |
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1946 case Dialect_SQLite: |
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1947 case Dialect_PostgreSQL: |
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1948 return "ESCAPE '\\'"; |
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1949 |
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1950 case Dialect_MySQL: |
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1951 return "ESCAPE '\\\\'"; |
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1952 |
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1953 default: |
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1954 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); |
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1955 } |
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1956 } |
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1957 |
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1958 void PrepareStatement(DatabaseManager::StandaloneStatement& statement) const |
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1959 { |
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1960 statement.SetReadOnly(true); |
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1961 |
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1962 for (size_t i = 0; i < count_; i++) |
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1963 { |
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1964 statement.SetParameterType(FormatParameter(i), ValueType_Utf8String); |
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1965 } |
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1966 } |
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1967 |
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1968 const Dictionary& GetDictionary() const |
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1969 { |
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1970 return dictionary_; |
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1971 } |
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1972 }; |
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1973 #endif |
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1974 |
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1975 |
| 78 | 1976 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1 |
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1977 // New primitive since Orthanc 1.5.2 |
|
203
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1978 void IndexBackend::LookupResources(IDatabaseBackendOutput& output, |
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1979 DatabaseManager& manager, |
|
201
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1980 const std::vector<Orthanc::DatabaseConstraint>& lookup, |
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1981 OrthancPluginResourceType queryLevel, |
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1982 uint32_t limit, |
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1983 bool requestSomeInstance) |
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1984 { |
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1985 LookupFormatter formatter(manager.GetDialect()); |
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1986 |
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1987 std::string sql; |
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1988 Orthanc::ISqlLookupFormatter::Apply(sql, formatter, lookup, |
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1989 Orthanc::Plugins::Convert(queryLevel), limit); |
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1990 |
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1991 if (requestSomeInstance) |
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1992 { |
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1993 // Composite query to find some instance if requested |
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1994 switch (queryLevel) |
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1995 { |
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1996 case OrthancPluginResourceType_Patient: |
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1997 sql = ("SELECT patients.publicId, MIN(instances.publicId) FROM (" + sql + ") patients " |
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1998 "INNER JOIN Resources studies ON studies.parentId = patients.internalId " |
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1999 "INNER JOIN Resources series ON series.parentId = studies.internalId " |
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2000 "INNER JOIN Resources instances ON instances.parentId = series.internalId " |
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2001 "GROUP BY patients.publicId"); |
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2002 break; |
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2003 |
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2004 case OrthancPluginResourceType_Study: |
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2005 sql = ("SELECT studies.publicId, MIN(instances.publicId) FROM (" + sql + ") studies " |
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2006 "INNER JOIN Resources series ON series.parentId = studies.internalId " |
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2007 "INNER JOIN Resources instances ON instances.parentId = series.internalId " |
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2008 "GROUP BY studies.publicId"); |
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2009 break; |
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2010 |
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2011 case OrthancPluginResourceType_Series: |
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2012 sql = ("SELECT series.publicId, MIN(instances.publicId) FROM (" + sql + ") series " |
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2013 "INNER JOIN Resources instances ON instances.parentId = series.internalId " |
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2014 "GROUP BY series.publicId"); |
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2015 break; |
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2016 |
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2017 case OrthancPluginResourceType_Instance: |
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2018 sql = ("SELECT instances.publicId, instances.publicId FROM (" + sql + ") instances"); |
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2019 break; |
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2020 |
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2021 default: |
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2022 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); |
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2023 } |
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2024 } |
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2025 |
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225
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2026 DatabaseManager::StandaloneStatement statement(manager, sql); |
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2027 formatter.PrepareStatement(statement); |
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2028 |
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2029 statement.Execute(formatter.GetDictionary()); |
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2030 |
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2031 while (!statement.IsDone()) |
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2032 { |
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2033 if (requestSomeInstance) |
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2034 { |
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2035 output.AnswerMatchingResource(statement.ReadString(0), statement.ReadString(1)); |
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2036 } |
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2037 else |
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2038 { |
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2039 output.AnswerMatchingResource(statement.ReadString(0)); |
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2040 } |
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2041 |
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2042 statement.Next(); |
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2043 } |
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2044 } |
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2045 #endif |
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2046 |
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2047 |
| 78 | 2048 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1 |
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2049 static void ExecuteSetResourcesContentTags( |
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2050 DatabaseManager& manager, |
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2051 const std::string& table, |
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2052 const std::string& variablePrefix, |
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2053 uint32_t count, |
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2054 const OrthancPluginResourcesContentTags* tags) |
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2055 { |
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2056 std::string sql; |
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2057 Dictionary args; |
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2058 |
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2059 for (uint32_t i = 0; i < count; i++) |
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2060 { |
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2061 std::string name = variablePrefix + boost::lexical_cast<std::string>(i); |
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2062 |
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2063 args.SetUtf8Value(name, tags[i].value); |
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2064 |
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2065 std::string insert = ("(" + boost::lexical_cast<std::string>(tags[i].resource) + ", " + |
|
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2066 boost::lexical_cast<std::string>(tags[i].group) + ", " + |
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2067 boost::lexical_cast<std::string>(tags[i].element) + ", " + |
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|
2068 "${" + name + "})"); |
|
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2069 |
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2070 if (sql.empty()) |
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2071 { |
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2072 sql = "INSERT INTO " + table + " VALUES " + insert; |
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2073 } |
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2074 else |
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2075 { |
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|
2076 sql += ", " + insert; |
|
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2077 } |
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2078 } |
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2079 |
|
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2080 if (!sql.empty()) |
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2081 { |
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|
2082 DatabaseManager::StandaloneStatement statement(manager, sql); |
|
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2083 |
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2084 for (uint32_t i = 0; i < count; i++) |
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2085 { |
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|
2086 statement.SetParameterType(variablePrefix + boost::lexical_cast<std::string>(i), |
|
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2087 ValueType_Utf8String); |
|
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2088 } |
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2089 |
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2090 statement.Execute(args); |
|
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2091 } |
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2092 } |
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2093 #endif |
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2094 |
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2095 |
| 78 | 2096 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1 |
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2097 static void ExecuteSetResourcesContentMetadata( |
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2098 DatabaseManager& manager, |
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2099 bool hasRevisionsSupport, |
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2100 uint32_t count, |
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2101 const OrthancPluginResourcesContentMetadata* metadata) |
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2102 { |
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2103 std::string sqlRemove; // To overwrite |
|
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2104 std::string sqlInsert; |
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2105 Dictionary args; |
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2106 |
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2107 for (uint32_t i = 0; i < count; i++) |
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2108 { |
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2109 std::string name = "m" + boost::lexical_cast<std::string>(i); |
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2110 |
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2111 args.SetUtf8Value(name, metadata[i].value); |
|
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2112 |
|
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|
2113 std::string revisionSuffix; |
|
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2114 if (hasRevisionsSupport) |
|
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2115 { |
|
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2116 revisionSuffix = ", 0"; |
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2117 } |
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2118 |
|
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2119 std::string insert = ("(" + boost::lexical_cast<std::string>(metadata[i].resource) + ", " + |
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2120 boost::lexical_cast<std::string>(metadata[i].metadata) + ", " + |
|
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2121 "${" + name + "}" + revisionSuffix + ")"); |
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2122 |
|
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2123 std::string remove = ("(id=" + boost::lexical_cast<std::string>(metadata[i].resource) + |
|
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2124 " AND type=" + boost::lexical_cast<std::string>(metadata[i].metadata) |
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2125 + ")"); |
|
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2126 |
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2127 if (sqlInsert.empty()) |
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2128 { |
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2129 sqlInsert = "INSERT INTO Metadata VALUES " + insert; |
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2130 } |
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2131 else |
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2132 { |
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2133 sqlInsert += ", " + insert; |
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2134 } |
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2135 |
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2136 if (sqlRemove.empty()) |
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2137 { |
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2138 sqlRemove = "DELETE FROM Metadata WHERE " + remove; |
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2139 } |
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2140 else |
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2141 { |
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2142 sqlRemove += " OR " + remove; |
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2143 } |
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2144 } |
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2145 |
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2146 if (!sqlRemove.empty()) |
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2147 { |
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2148 DatabaseManager::StandaloneStatement statement(manager, sqlRemove); |
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2149 statement.Execute(); |
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2150 } |
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2151 |
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2152 if (!sqlInsert.empty()) |
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2153 { |
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2154 DatabaseManager::StandaloneStatement statement(manager, sqlInsert); |
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2155 |
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2156 for (uint32_t i = 0; i < count; i++) |
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2157 { |
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2158 statement.SetParameterType("m" + boost::lexical_cast<std::string>(i), |
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2159 ValueType_Utf8String); |
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2160 } |
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2161 |
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2162 statement.Execute(args); |
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2163 } |
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2164 } |
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2165 #endif |
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2166 |
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2167 |
| 78 | 2168 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1 |
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2169 // New primitive since Orthanc 1.5.2 |
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2170 void IndexBackend::SetResourcesContent( |
|
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2171 DatabaseManager& manager, |
|
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2172 uint32_t countIdentifierTags, |
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2173 const OrthancPluginResourcesContentTags* identifierTags, |
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2174 uint32_t countMainDicomTags, |
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2175 const OrthancPluginResourcesContentTags* mainDicomTags, |
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2176 uint32_t countMetadata, |
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2177 const OrthancPluginResourcesContentMetadata* metadata) |
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2178 { |
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|
2179 /** |
|
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2180 * TODO - PostgreSQL doesn't allow multiple commands in a prepared |
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2181 * statement, so we execute 3 separate commands (for identifiers, |
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2182 * main tags and metadata). Maybe MySQL does not suffer from the |
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2183 * same limitation, to check. |
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2184 **/ |
|
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2185 |
|
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2186 ExecuteSetResourcesContentTags(manager, "DicomIdentifiers", "i", |
|
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2187 countIdentifierTags, identifierTags); |
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2188 |
|
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2189 ExecuteSetResourcesContentTags(manager, "MainDicomTags", "t", |
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2190 countMainDicomTags, mainDicomTags); |
|
256
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|
2191 |
|
266
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2192 ExecuteSetResourcesContentMetadata(manager, HasRevisionsSupport(), countMetadata, metadata); |
|
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2193 } |
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2194 #endif |
|
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2195 |
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2196 |
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|
2197 // New primitive since Orthanc 1.5.2 |
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|
2198 void IndexBackend::GetChildrenMetadata(std::list<std::string>& target, |
|
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|
2199 DatabaseManager& manager, |
|
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2200 int64_t resourceId, |
|
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|
2201 int32_t metadata) |
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2202 { |
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2203 DatabaseManager::CachedStatement statement( |
|
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2204 STATEMENT_FROM_HERE, manager, |
|
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|
2205 "SELECT value FROM Metadata WHERE type=${metadata} AND " |
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|
2206 "id IN (SELECT internalId FROM Resources WHERE parentId=${id})"); |
|
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2207 |
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2208 statement.SetReadOnly(true); |
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|
2209 statement.SetParameterType("id", ValueType_Integer64); |
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|
2210 statement.SetParameterType("metadata", ValueType_Integer64); |
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2211 |
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|
2212 Dictionary args; |
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|
2213 args.SetIntegerValue("id", static_cast<int>(resourceId)); |
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2214 args.SetIntegerValue("metadata", static_cast<int>(metadata)); |
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2215 |
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|
2216 ReadListOfStrings(target, statement, args); |
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2217 } |
|
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2218 |
|
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2219 |
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2220 // New primitive since Orthanc 1.5.2 |
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2221 void IndexBackend::TagMostRecentPatient(DatabaseManager& manager, |
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2222 int64_t patient) |
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2223 { |
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|
2224 int64_t seq; |
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2225 |
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2226 { |
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|
2227 DatabaseManager::CachedStatement statement( |
|
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2228 STATEMENT_FROM_HERE, manager, |
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2229 "SELECT * FROM PatientRecyclingOrder WHERE seq >= " |
|
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|
2230 "(SELECT seq FROM PatientRecyclingOrder WHERE patientid=${id}) ORDER BY seq LIMIT 2"); |
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2231 |
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2232 statement.SetReadOnly(true); |
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|
2233 statement.SetParameterType("id", ValueType_Integer64); |
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2234 |
|
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2235 Dictionary args; |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2236 args.SetIntegerValue("id", patient); |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2237 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2238 statement.Execute(args); |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2239 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2240 if (statement.IsDone()) |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
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|
2241 { |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2242 // The patient is protected, don't add it to the recycling order |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2243 return; |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2244 } |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2245 |
|
263
29d2b76516f6
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
262
diff
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|
2246 seq = statement.ReadInteger64(0); |
|
88
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
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|
2247 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2248 statement.Next(); |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2249 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2250 if (statement.IsDone()) |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2251 { |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2252 // The patient is already at the end of the recycling order |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2253 // (because of the "LIMIT 2" above), no need to modify the table |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2254 return; |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2255 } |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2256 } |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2257 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2258 // Delete the old position of the patient in the recycling order |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2259 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2260 { |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2261 DatabaseManager::CachedStatement statement( |
|
225
94c9908e6aca
removed DatabaseManager member out of class IndexBackend
Sebastien Jodogne <s.jodogne@gmail.com>
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222
diff
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|
2262 STATEMENT_FROM_HERE, manager, |
|
88
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
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85
diff
changeset
|
2263 "DELETE FROM PatientRecyclingOrder WHERE seq=${seq}"); |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2264 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2265 statement.SetParameterType("seq", ValueType_Integer64); |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2266 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2267 Dictionary args; |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2268 args.SetIntegerValue("seq", seq); |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2269 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2270 statement.Execute(args); |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
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85
diff
changeset
|
2271 } |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2272 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2273 // Add the patient to the end of the recycling order |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2274 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
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85
diff
changeset
|
2275 { |
|
eb08ec14fb04
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Sebastien Jodogne <s.jodogne@gmail.com>
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85
diff
changeset
|
2276 DatabaseManager::CachedStatement statement( |
|
225
94c9908e6aca
removed DatabaseManager member out of class IndexBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
222
diff
changeset
|
2277 STATEMENT_FROM_HERE, manager, |
|
302
3a52e27a2d80
in GenericFormatter, replaced ${} by ${AUTOINCREMENT}
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
301
diff
changeset
|
2278 "INSERT INTO PatientRecyclingOrder VALUES({AUTOINCREMENT} ${id})"); |
|
88
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
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85
diff
changeset
|
2279 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2280 statement.SetParameterType("id", ValueType_Integer64); |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2281 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2282 Dictionary args; |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2283 args.SetIntegerValue("id", patient); |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2284 |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
changeset
|
2285 statement.Execute(args); |
|
eb08ec14fb04
new extension implemented: TagMostRecentPatient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
85
diff
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|
2286 } |
|
eb08ec14fb04
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Sebastien Jodogne <s.jodogne@gmail.com>
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85
diff
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|
2287 } |
|
117
ca0ecd412988
Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
88
diff
changeset
|
2288 |
|
ca0ecd412988
Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
88
diff
changeset
|
2289 |
|
ca0ecd412988
Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
88
diff
changeset
|
2290 #if defined(ORTHANC_PLUGINS_VERSION_IS_ABOVE) // Macro introduced in 1.3.1 |
|
ca0ecd412988
Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
88
diff
changeset
|
2291 # if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 5, 4) |
|
ca0ecd412988
Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
88
diff
changeset
|
2292 // New primitive since Orthanc 1.5.4 |
|
203
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2293 bool IndexBackend::LookupResourceAndParent(int64_t& id, |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2294 OrthancPluginResourceType& type, |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2295 std::string& parentPublicId, |
|
225
94c9908e6aca
removed DatabaseManager member out of class IndexBackend
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
222
diff
changeset
|
2296 DatabaseManager& manager, |
|
203
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2297 const char* publicId) |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2298 { |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2299 DatabaseManager::CachedStatement statement( |
|
225
94c9908e6aca
removed DatabaseManager member out of class IndexBackend
Sebastien Jodogne <s.jodogne@gmail.com>
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222
diff
changeset
|
2300 STATEMENT_FROM_HERE, manager, |
|
203
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2301 "SELECT resource.internalId, resource.resourceType, parent.publicId " |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2302 "FROM Resources AS resource LEFT JOIN Resources parent ON parent.internalId=resource.parentId " |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2303 "WHERE resource.publicId=${id}"); |
|
117
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Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
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88
diff
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|
2304 |
|
203
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
2305 statement.SetParameterType("id", ValueType_Utf8String); |
|
117
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diff
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|
2306 |
|
203
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2307 Dictionary args; |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2308 args.SetUtf8Value("id", publicId); |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2309 |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2310 statement.Execute(args); |
|
117
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88
diff
changeset
|
2311 |
|
203
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2312 if (statement.IsDone()) |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
201
diff
changeset
|
2313 { |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
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201
diff
changeset
|
2314 return false; |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
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201
diff
changeset
|
2315 } |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
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parents:
201
diff
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|
2316 else |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
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201
diff
changeset
|
2317 { |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
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201
diff
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|
2318 if (statement.GetResultFieldsCount() != 3) |
|
117
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|
2319 { |
|
203
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|
2320 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); |
|
117
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|
2321 } |
|
203
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moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
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201
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changeset
|
2322 |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
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201
diff
changeset
|
2323 statement.SetResultFieldType(0, ValueType_Integer64); |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
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201
diff
changeset
|
2324 statement.SetResultFieldType(1, ValueType_Integer64); |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
2325 statement.SetResultFieldType(2, ValueType_Utf8String); |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
Sebastien Jodogne <s.jodogne@gmail.com>
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201
diff
changeset
|
2326 |
|
263
29d2b76516f6
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Sebastien Jodogne <s.jodogne@gmail.com>
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262
diff
changeset
|
2327 id = statement.ReadInteger64(0); |
|
29d2b76516f6
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
2328 type = static_cast<OrthancPluginResourceType>(statement.ReadInteger32(1)); |
|
203
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changeset
|
2329 |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
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diff
changeset
|
2330 const IValue& value = statement.GetResultField(2); |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
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changeset
|
2331 |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
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diff
changeset
|
2332 switch (value.GetType()) |
|
117
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|
2333 { |
|
203
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moving classes out of OrthancPlugins namespace, to OrthancDatabases
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changeset
|
2334 case ValueType_Null: |
|
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moving classes out of OrthancPlugins namespace, to OrthancDatabases
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changeset
|
2335 parentPublicId.clear(); |
|
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moving classes out of OrthancPlugins namespace, to OrthancDatabases
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|
2336 break; |
|
2089d4071408
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diff
changeset
|
2337 |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
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changeset
|
2338 case ValueType_Utf8String: |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
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changeset
|
2339 parentPublicId = dynamic_cast<const Utf8StringValue&>(value).GetContent(); |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
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changeset
|
2340 break; |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
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changeset
|
2341 |
|
2089d4071408
moving classes out of OrthancPlugins namespace, to OrthancDatabases
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|
2342 default: |
|
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|
2343 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); |
|
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2344 } |
|
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2345 |
|
203
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2346 assert((statement.Next(), statement.IsDone())); |
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2347 return true; |
|
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|
2348 } |
|
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2349 } |
|
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|
2350 # endif |
|
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|
2351 #endif |
|
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Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
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|
2352 |
|
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Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
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diff
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|
2353 |
|
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Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
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|
2354 #if defined(ORTHANC_PLUGINS_VERSION_IS_ABOVE) // Macro introduced in 1.3.1 |
|
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|
2355 # if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 5, 4) |
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|
2356 // New primitive since Orthanc 1.5.4 |
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Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
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|
2357 void IndexBackend::GetAllMetadata(std::map<int32_t, std::string>& result, |
|
225
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2358 DatabaseManager& manager, |
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|
2359 int64_t id) |
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|
2360 { |
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|
2361 DatabaseManager::CachedStatement statement( |
|
225
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2362 STATEMENT_FROM_HERE, manager, |
|
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2363 "SELECT type, value FROM Metadata WHERE id=${id}"); |
|
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|
2364 |
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|
2365 statement.SetReadOnly(true); |
|
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|
2366 statement.SetParameterType("id", ValueType_Integer64); |
|
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|
2367 |
|
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|
2368 Dictionary args; |
|
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|
2369 args.SetIntegerValue("id", id); |
|
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|
2370 |
|
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|
2371 statement.Execute(args); |
|
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|
2372 |
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|
2373 result.clear(); |
|
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|
2374 |
|
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|
2375 if (!statement.IsDone()) |
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|
2376 { |
|
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|
2377 if (statement.GetResultFieldsCount() != 2) |
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|
2378 { |
|
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|
2379 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); |
|
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|
2380 } |
|
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|
2381 |
|
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|
2382 statement.SetResultFieldType(0, ValueType_Integer64); |
|
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|
2383 statement.SetResultFieldType(1, ValueType_Utf8String); |
|
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|
2384 |
|
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|
2385 while (!statement.IsDone()) |
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|
2386 { |
|
263
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|
2387 result[statement.ReadInteger32(0)] = statement.ReadString(1); |
|
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|
2388 statement.Next(); |
|
ca0ecd412988
Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
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|
2389 } |
|
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|
2390 } |
|
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|
2391 } |
|
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|
2392 # endif |
|
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|
2393 #endif |
|
210
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|
2394 |
|
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changeset
|
2395 |
|
271
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266
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|
2396 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1 |
|
210
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changeset
|
2397 void IndexBackend::CreateInstanceGeneric(OrthancPluginCreateInstanceResult& result, |
|
225
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changeset
|
2398 DatabaseManager& manager, |
|
210
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|
2399 const char* hashPatient, |
|
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|
2400 const char* hashStudy, |
|
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|
2401 const char* hashSeries, |
|
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|
2402 const char* hashInstance) |
|
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|
2403 { |
|
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|
2404 // Check out "OrthancServer/Sources/Database/Compatibility/ICreateInstance.cpp" |
|
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|
2405 |
|
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diff
changeset
|
2406 { |
|
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|
2407 OrthancPluginResourceType type; |
|
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|
2408 int64_t tmp; |
|
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|
2409 |
|
225
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|
2410 if (LookupResource(tmp, type, manager, hashInstance)) |
|
210
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|
2411 { |
|
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|
2412 // The instance already exists |
|
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|
2413 assert(type == OrthancPluginResourceType_Instance); |
|
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|
2414 result.instanceId = tmp; |
|
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changeset
|
2415 result.isNewInstance = false; |
|
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|
2416 return; |
|
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|
2417 } |
|
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|
2418 } |
|
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|
2419 |
|
225
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|
2420 result.instanceId = CreateResource(manager, hashInstance, OrthancPluginResourceType_Instance); |
|
210
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|
2421 result.isNewInstance = true; |
|
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|
2422 |
|
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|
2423 result.isNewPatient = false; |
|
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|
2424 result.isNewStudy = false; |
|
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|
2425 result.isNewSeries = false; |
|
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|
2426 result.patientId = -1; |
|
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|
2427 result.studyId = -1; |
|
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|
2428 result.seriesId = -1; |
|
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|
2429 |
|
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|
2430 // Detect up to which level the patient/study/series/instance |
|
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|
2431 // hierarchy must be created |
|
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|
2432 |
|
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|
2433 { |
|
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|
2434 OrthancPluginResourceType dummy; |
|
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|
2435 |
|
225
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|
2436 if (LookupResource(result.seriesId, dummy, manager, hashSeries)) |
|
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|
2437 { |
|
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|
2438 assert(dummy == OrthancPluginResourceType_Series); |
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|
2439 // The patient, the study and the series already exist |
|
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|
2440 |
|
225
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2441 bool ok = (LookupResource(result.patientId, dummy, manager, hashPatient) && |
|
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2442 LookupResource(result.studyId, dummy, manager, hashStudy)); |
|
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|
2443 (void) ok; // Remove warning about unused variable in release builds |
|
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|
2444 assert(ok); |
|
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2445 } |
|
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|
2446 else if (LookupResource(result.studyId, dummy, manager, hashStudy)) |
|
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|
2447 { |
|
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changeset
|
2448 assert(dummy == OrthancPluginResourceType_Study); |
|
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changeset
|
2449 |
|
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diff
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|
2450 // New series: The patient and the study already exist |
|
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diff
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|
2451 result.isNewSeries = true; |
|
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diff
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|
2452 |
|
225
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|
2453 bool ok = LookupResource(result.patientId, dummy, manager, hashPatient); |
|
210
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diff
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|
2454 (void) ok; // Remove warning about unused variable in release builds |
|
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diff
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|
2455 assert(ok); |
|
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diff
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|
2456 } |
|
225
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|
2457 else if (LookupResource(result.patientId, dummy, manager, hashPatient)) |
|
210
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diff
changeset
|
2458 { |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2459 assert(dummy == OrthancPluginResourceType_Patient); |
|
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209
diff
changeset
|
2460 |
|
a0c095a4ba7d
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diff
changeset
|
2461 // New study and series: The patient already exist |
|
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diff
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|
2462 result.isNewStudy = true; |
|
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diff
changeset
|
2463 result.isNewSeries = true; |
|
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diff
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|
2464 } |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2465 else |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2466 { |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2467 // New patient, study and series: Nothing exists |
|
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209
diff
changeset
|
2468 result.isNewPatient = true; |
|
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diff
changeset
|
2469 result.isNewStudy = true; |
|
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209
diff
changeset
|
2470 result.isNewSeries = true; |
|
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diff
changeset
|
2471 } |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2472 } |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2473 |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2474 // Create the series if needed |
|
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209
diff
changeset
|
2475 if (result.isNewSeries) |
|
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diff
changeset
|
2476 { |
|
225
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diff
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|
2477 result.seriesId = CreateResource(manager, hashSeries, OrthancPluginResourceType_Series); |
|
210
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diff
changeset
|
2478 } |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2479 |
|
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diff
changeset
|
2480 // Create the study if needed |
|
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diff
changeset
|
2481 if (result.isNewStudy) |
|
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diff
changeset
|
2482 { |
|
225
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diff
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|
2483 result.studyId = CreateResource(manager, hashStudy, OrthancPluginResourceType_Study); |
|
210
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changeset
|
2484 } |
|
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diff
changeset
|
2485 |
|
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diff
changeset
|
2486 // Create the patient if needed |
|
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diff
changeset
|
2487 if (result.isNewPatient) |
|
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diff
changeset
|
2488 { |
|
225
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diff
changeset
|
2489 result.patientId = CreateResource(manager, hashPatient, OrthancPluginResourceType_Patient); |
|
210
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diff
changeset
|
2490 } |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2491 |
|
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diff
changeset
|
2492 // Create the parent-to-child links |
|
225
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diff
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|
2493 AttachChild(manager, result.seriesId, result.instanceId); |
|
210
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diff
changeset
|
2494 |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2495 if (result.isNewSeries) |
|
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diff
changeset
|
2496 { |
|
225
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diff
changeset
|
2497 AttachChild(manager, result.studyId, result.seriesId); |
|
210
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diff
changeset
|
2498 } |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2499 |
|
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all the integration tests pass on SQLite
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diff
changeset
|
2500 if (result.isNewStudy) |
|
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209
diff
changeset
|
2501 { |
|
225
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diff
changeset
|
2502 AttachChild(manager, result.patientId, result.studyId); |
|
210
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diff
changeset
|
2503 } |
|
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all the integration tests pass on SQLite
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209
diff
changeset
|
2504 |
|
225
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diff
changeset
|
2505 TagMostRecentPatient(manager, result.patientId); |
|
210
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diff
changeset
|
2506 |
|
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diff
changeset
|
2507 // Sanity checks |
|
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diff
changeset
|
2508 assert(result.patientId != -1); |
|
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diff
changeset
|
2509 assert(result.studyId != -1); |
|
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diff
changeset
|
2510 assert(result.seriesId != -1); |
|
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209
diff
changeset
|
2511 assert(result.instanceId != -1); |
|
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209
diff
changeset
|
2512 } |
|
271
6b18d3fbee82
backward compatibility with Orthanc SDK 0.9.5
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266
diff
changeset
|
2513 #endif |
|
213
c2e4a909de0e
added IndexBackend::Register() to be used in all the index plugins
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210
diff
changeset
|
2514 |
|
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added IndexBackend::Register() to be used in all the index plugins
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210
diff
changeset
|
2515 |
|
234
d1b124d116c1
PostgreSQL index plugin handles retries for collisions between multiple writers
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diff
changeset
|
2516 void IndexBackend::Register(IndexBackend* backend, |
|
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diff
changeset
|
2517 size_t countConnections, |
|
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diff
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|
2518 unsigned int maxDatabaseRetries) |
|
213
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added IndexBackend::Register() to be used in all the index plugins
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diff
changeset
|
2519 { |
|
222
c8e06b41feec
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diff
changeset
|
2520 if (backend == NULL) |
|
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refactoring registration/finalization of index backend
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diff
changeset
|
2521 { |
|
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refactoring registration/finalization of index backend
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diff
changeset
|
2522 throw Orthanc::OrthancException(Orthanc::ErrorCode_NullPointer); |
|
c8e06b41feec
refactoring registration/finalization of index backend
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diff
changeset
|
2523 } |
|
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refactoring registration/finalization of index backend
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diff
changeset
|
2524 |
|
213
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diff
changeset
|
2525 bool hasLoadedV3 = false; |
|
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added IndexBackend::Register() to be used in all the index plugins
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diff
changeset
|
2526 |
|
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added IndexBackend::Register() to be used in all the index plugins
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diff
changeset
|
2527 #if defined(ORTHANC_PLUGINS_VERSION_IS_ABOVE) // Macro introduced in Orthanc 1.3.1 |
|
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added IndexBackend::Register() to be used in all the index plugins
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diff
changeset
|
2528 # if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 9, 2) |
|
222
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diff
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|
2529 if (OrthancPluginCheckVersionAdvanced(backend->GetContext(), 1, 9, 2) == 1) |
|
213
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added IndexBackend::Register() to be used in all the index plugins
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diff
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|
2530 { |
|
253
3bc442765b88
new configuration option: "IndexConnectionsCount"
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249
diff
changeset
|
2531 LOG(WARNING) << "The index plugin will use " << countConnections << " connection(s) to the database, " |
|
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diff
changeset
|
2532 << "and will retry up to " << maxDatabaseRetries << " time(s) in the case of a collision"; |
|
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diff
changeset
|
2533 |
|
234
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diff
changeset
|
2534 OrthancDatabases::DatabaseBackendAdapterV3::Register(backend, countConnections, maxDatabaseRetries); |
|
213
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diff
changeset
|
2535 hasLoadedV3 = true; |
|
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|
2536 } |
|
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diff
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|
2537 # endif |
|
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diff
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|
2538 #endif |
|
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added IndexBackend::Register() to be used in all the index plugins
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|
2539 |
|
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added IndexBackend::Register() to be used in all the index plugins
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diff
changeset
|
2540 if (!hasLoadedV3) |
|
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diff
changeset
|
2541 { |
|
278
e55e4e8f9459
improved log message
Sebastien Jodogne <s.jodogne@gmail.com>
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271
diff
changeset
|
2542 LOG(WARNING) << "Performance warning: Your version of the Orthanc core or SDK doesn't support multiple readers/writers"; |
|
213
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added IndexBackend::Register() to be used in all the index plugins
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diff
changeset
|
2543 OrthancDatabases::DatabaseBackendAdapterV2::Register(backend); |
|
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|
2544 } |
|
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added IndexBackend::Register() to be used in all the index plugins
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diff
changeset
|
2545 } |
|
222
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diff
changeset
|
2546 |
|
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diff
changeset
|
2547 |
|
237
35598014f140
refactoring to remove GlobalProperties.cpp
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diff
changeset
|
2548 bool IndexBackend::LookupGlobalIntegerProperty(int& target, |
|
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diff
changeset
|
2549 DatabaseManager& manager, |
|
35598014f140
refactoring to remove GlobalProperties.cpp
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diff
changeset
|
2550 const char* serverIdentifier, |
|
35598014f140
refactoring to remove GlobalProperties.cpp
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diff
changeset
|
2551 int32_t property) |
|
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diff
changeset
|
2552 { |
|
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diff
changeset
|
2553 std::string value; |
|
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2554 |
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2555 if (LookupGlobalProperty(value, manager, serverIdentifier, property)) |
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2556 { |
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2557 try |
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2558 { |
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2559 target = boost::lexical_cast<int>(value); |
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2560 return true; |
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2561 } |
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2562 catch (boost::bad_lexical_cast&) |
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2563 { |
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2564 LOG(ERROR) << "Corrupted PostgreSQL database"; |
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2565 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); |
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2566 } |
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2567 } |
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2568 else |
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2569 { |
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2570 return false; |
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2571 } |
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2572 } |
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2573 |
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2574 |
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2575 void IndexBackend::SetGlobalIntegerProperty(DatabaseManager& manager, |
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2576 const char* serverIdentifier, |
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2577 int32_t property, |
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2578 int value) |
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2579 { |
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2580 std::string s = boost::lexical_cast<std::string>(value); |
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2581 SetGlobalProperty(manager, serverIdentifier, property, s.c_str()); |
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2582 } |
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2583 |
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2584 |
|
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2585 void IndexBackend::Finalize() |
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2586 { |
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2587 OrthancDatabases::DatabaseBackendAdapterV2::Finalize(); |
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2588 |
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2589 #if defined(ORTHANC_PLUGINS_VERSION_IS_ABOVE) // Macro introduced in Orthanc 1.3.1 |
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2590 # if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 9, 2) |
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2591 OrthancDatabases::DatabaseBackendAdapterV3::Finalize(); |
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2592 # endif |
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2593 #endif |
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2594 } |
|
226
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2595 |
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2596 |
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2597 DatabaseManager* IndexBackend::CreateSingleDatabaseManager(IDatabaseBackend& backend) |
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2598 { |
|
255
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2599 std::unique_ptr<DatabaseManager> manager(new DatabaseManager(backend.CreateDatabaseFactory())); |
|
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2600 backend.ConfigureDatabase(*manager); |
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2601 return manager.release(); |
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2602 } |
| 0 | 2603 } |