Mercurial > hg > orthanc-databases
annotate Framework/Plugins/IndexBackend.cpp @ 237:35598014f140
refactoring to remove GlobalProperties.cpp
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Thu, 08 Apr 2021 19:09:04 +0200 |
| parents | d1b124d116c1 |
| children | f033cc039264 |
| rev | line source |
|---|---|
| 0 | 1 /** |
| 2 * Orthanc - A Lightweight, RESTful DICOM Store | |
| 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
| 4 * Department, University Hospital of Liege, Belgium | |
|
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5 * Copyright (C) 2017-2021 Osimis S.A., Belgium |
| 0 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
| 8 * modify it under the terms of the GNU Affero General Public License | |
| 9 * as published by the Free Software Foundation, either version 3 of | |
| 10 * the License, or (at your option) any later version. | |
| 11 * | |
| 12 * This program is distributed in the hope that it will be useful, but | |
| 13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
| 15 * Affero General Public License for more details. | |
| 16 * | |
| 17 * You should have received a copy of the GNU Affero General Public License | |
| 18 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
| 19 **/ | |
| 20 | |
| 21 | |
| 22 #include "IndexBackend.h" | |
| 23 | |
| 152 | 24 #include "../../Resources/Orthanc/Databases/ISqlLookupFormatter.h" |
| 0 | 25 #include "../Common/BinaryStringValue.h" |
| 26 #include "../Common/Integer64Value.h" | |
| 27 #include "../Common/Utf8StringValue.h" | |
|
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28 #include "DatabaseBackendAdapterV2.h" |
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29 #include "DatabaseBackendAdapterV3.h" |
| 0 | 30 #include "GlobalProperties.h" |
| 31 | |
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32 #include <Compatibility.h> // For std::unique_ptr<> |
| 152 | 33 #include <Logging.h> |
| 34 #include <OrthancException.h> | |
| 0 | 35 |
| 36 | |
| 37 namespace OrthancDatabases | |
| 38 { | |
| 39 static std::string ConvertWildcardToLike(const std::string& query) | |
| 40 { | |
| 41 std::string s = query; | |
| 42 | |
| 43 for (size_t i = 0; i < s.size(); i++) | |
| 44 { | |
| 45 if (s[i] == '*') | |
| 46 { | |
| 47 s[i] = '%'; | |
| 48 } | |
| 49 else if (s[i] == '?') | |
| 50 { | |
| 51 s[i] = '_'; | |
| 52 } | |
| 53 } | |
| 54 | |
| 65 | 55 // TODO Escape underscores and percents |
| 56 | |
| 0 | 57 return s; |
| 58 } | |
| 59 | |
| 60 | |
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61 int64_t IndexBackend::ReadInteger64(const DatabaseManager::StatementBase& statement, |
| 0 | 62 size_t field) |
| 63 { | |
| 64 if (statement.IsDone()) | |
| 65 { | |
| 66 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); | |
| 67 } | |
| 68 | |
| 69 const IValue& value = statement.GetResultField(field); | |
| 70 | |
| 71 switch (value.GetType()) | |
| 72 { | |
| 73 case ValueType_Integer64: | |
| 74 return dynamic_cast<const Integer64Value&>(value).GetValue(); | |
| 75 | |
| 76 default: | |
| 77 //LOG(ERROR) << value.Format(); | |
| 78 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
| 79 } | |
| 80 } | |
| 81 | |
| 82 | |
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83 int32_t IndexBackend::ReadInteger32(const DatabaseManager::StatementBase& statement, |
| 0 | 84 size_t field) |
| 85 { | |
| 86 if (statement.IsDone()) | |
| 87 { | |
| 88 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); | |
| 89 } | |
| 90 | |
| 91 int64_t value = ReadInteger64(statement, field); | |
| 92 | |
| 93 if (value != static_cast<int64_t>(static_cast<int32_t>(value))) | |
| 94 { | |
| 95 LOG(ERROR) << "Integer overflow"; | |
| 96 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
| 97 } | |
| 98 else | |
| 99 { | |
| 100 return static_cast<int32_t>(value); | |
| 101 } | |
| 102 } | |
| 103 | |
| 104 | |
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105 std::string IndexBackend::ReadString(const DatabaseManager::StatementBase& statement, |
| 0 | 106 size_t field) |
| 107 { | |
| 108 const IValue& value = statement.GetResultField(field); | |
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109 |
| 0 | 110 switch (value.GetType()) |
| 111 { | |
| 112 case ValueType_BinaryString: | |
| 113 return dynamic_cast<const BinaryStringValue&>(value).GetContent(); | |
| 114 | |
| 115 case ValueType_Utf8String: | |
| 116 return dynamic_cast<const Utf8StringValue&>(value).GetContent(); | |
| 117 | |
| 118 default: | |
| 119 //LOG(ERROR) << value.Format(); | |
| 120 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
| 121 } | |
| 122 } | |
| 123 | |
| 124 | |
| 125 template <typename T> | |
| 126 void IndexBackend::ReadListOfIntegers(std::list<T>& target, | |
| 127 DatabaseManager::CachedStatement& statement, | |
| 128 const Dictionary& args) | |
| 129 { | |
| 130 statement.Execute(args); | |
| 131 | |
| 132 target.clear(); | |
| 133 | |
| 134 if (!statement.IsDone()) | |
| 135 { | |
| 136 if (statement.GetResultFieldsCount() != 1) | |
| 137 { | |
| 138 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
| 139 } | |
| 140 | |
| 141 statement.SetResultFieldType(0, ValueType_Integer64); | |
| 142 | |
| 143 while (!statement.IsDone()) | |
| 144 { | |
| 145 target.push_back(static_cast<T>(ReadInteger64(statement, 0))); | |
| 146 statement.Next(); | |
| 147 } | |
| 148 } | |
| 149 } | |
| 150 | |
| 151 | |
| 152 void IndexBackend::ReadListOfStrings(std::list<std::string>& target, | |
| 153 DatabaseManager::CachedStatement& statement, | |
| 154 const Dictionary& args) | |
| 155 { | |
| 156 statement.Execute(args); | |
| 157 | |
| 158 target.clear(); | |
| 159 | |
| 160 if (!statement.IsDone()) | |
| 161 { | |
| 162 if (statement.GetResultFieldsCount() != 1) | |
| 163 { | |
| 164 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); | |
| 165 } | |
| 166 | |
| 167 while (!statement.IsDone()) | |
| 168 { | |
| 169 target.push_back(ReadString(statement, 0)); | |
| 170 statement.Next(); | |
| 171 } | |
| 172 } | |
| 173 } | |
| 174 | |
| 175 | |
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176 void IndexBackend::ReadChangesInternal(IDatabaseBackendOutput& output, |
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177 bool& done, |
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178 DatabaseManager& manager, |
| 0 | 179 DatabaseManager::CachedStatement& statement, |
| 180 const Dictionary& args, | |
| 181 uint32_t maxResults) | |
| 182 { | |
| 183 statement.Execute(args); | |
| 184 | |
| 185 uint32_t count = 0; | |
| 186 | |
| 187 while (count < maxResults && | |
| 188 !statement.IsDone()) | |
| 189 { | |
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190 output.AnswerChange( |
| 0 | 191 ReadInteger64(statement, 0), |
| 192 ReadInteger32(statement, 1), | |
| 193 static_cast<OrthancPluginResourceType>(ReadInteger32(statement, 3)), | |
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194 GetPublicId(manager, ReadInteger64(statement, 2)), |
| 0 | 195 ReadString(statement, 4)); |
| 196 | |
| 197 statement.Next(); | |
| 198 count++; | |
| 199 } | |
| 200 | |
| 201 done = (count < maxResults || | |
| 202 statement.IsDone()); | |
| 203 } | |
| 204 | |
| 205 | |
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206 void IndexBackend::ReadExportedResourcesInternal(IDatabaseBackendOutput& output, |
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207 bool& done, |
| 0 | 208 DatabaseManager::CachedStatement& statement, |
| 209 const Dictionary& args, | |
| 210 uint32_t maxResults) | |
| 211 { | |
| 212 statement.Execute(args); | |
| 213 | |
| 214 uint32_t count = 0; | |
| 215 | |
| 216 while (count < maxResults && | |
| 217 !statement.IsDone()) | |
| 218 { | |
| 219 int64_t seq = ReadInteger64(statement, 0); | |
| 220 OrthancPluginResourceType resourceType = | |
| 221 static_cast<OrthancPluginResourceType>(ReadInteger32(statement, 1)); | |
| 222 std::string publicId = ReadString(statement, 2); | |
| 223 | |
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224 output.AnswerExportedResource(seq, |
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225 resourceType, |
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226 publicId, |
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227 ReadString(statement, 3), // modality |
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228 ReadString(statement, 8), // date |
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229 ReadString(statement, 4), // patient ID |
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230 ReadString(statement, 5), // study instance UID |
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231 ReadString(statement, 6), // series instance UID |
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232 ReadString(statement, 7)); // sop instance UID |
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233 |
| 0 | 234 statement.Next(); |
| 235 count++; | |
| 236 } | |
| 237 | |
| 238 done = (count < maxResults || | |
| 239 statement.IsDone()); | |
| 240 } | |
| 241 | |
| 242 | |
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243 void IndexBackend::ClearDeletedFiles(DatabaseManager& manager) |
| 0 | 244 { |
| 245 DatabaseManager::CachedStatement statement( | |
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246 STATEMENT_FROM_HERE, manager, |
| 0 | 247 "DELETE FROM DeletedFiles"); |
| 248 | |
| 249 statement.Execute(); | |
| 250 } | |
| 251 | |
| 252 | |
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253 void IndexBackend::ClearDeletedResources(DatabaseManager& manager) |
| 0 | 254 { |
| 255 DatabaseManager::CachedStatement statement( | |
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256 STATEMENT_FROM_HERE, manager, |
| 0 | 257 "DELETE FROM DeletedResources"); |
| 258 | |
| 259 statement.Execute(); | |
| 260 } | |
| 261 | |
| 262 | |
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263 void IndexBackend::SignalDeletedFiles(IDatabaseBackendOutput& output, |
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264 DatabaseManager& manager) |
| 0 | 265 { |
| 266 DatabaseManager::CachedStatement statement( | |
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267 STATEMENT_FROM_HERE, manager, |
| 0 | 268 "SELECT * FROM DeletedFiles"); |
| 269 | |
| 270 statement.SetReadOnly(true); | |
| 271 statement.Execute(); | |
| 272 | |
| 273 while (!statement.IsDone()) | |
| 274 { | |
| 275 std::string a = ReadString(statement, 0); | |
| 276 std::string b = ReadString(statement, 5); | |
| 277 std::string c = ReadString(statement, 6); | |
| 278 | |
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279 output.SignalDeletedAttachment(a.c_str(), |
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280 ReadInteger32(statement, 1), |
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281 ReadInteger64(statement, 3), |
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282 b.c_str(), |
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283 ReadInteger32(statement, 4), |
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284 ReadInteger64(statement, 2), |
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285 c.c_str()); |
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286 |
| 0 | 287 statement.Next(); |
| 288 } | |
| 289 } | |
| 290 | |
| 291 | |
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292 void IndexBackend::SignalDeletedResources(IDatabaseBackendOutput& output, |
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293 DatabaseManager& manager) |
| 0 | 294 { |
| 295 DatabaseManager::CachedStatement statement( | |
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296 STATEMENT_FROM_HERE, manager, |
| 0 | 297 "SELECT * FROM DeletedResources"); |
| 298 | |
| 299 statement.SetReadOnly(true); | |
| 300 statement.Execute(); | |
| 301 | |
| 302 while (!statement.IsDone()) | |
| 303 { | |
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304 output.SignalDeletedResource( |
| 0 | 305 ReadString(statement, 1), |
| 306 static_cast<OrthancPluginResourceType>(ReadInteger32(statement, 0))); | |
| 307 | |
| 308 statement.Next(); | |
| 309 } | |
| 310 } | |
| 311 | |
| 312 | |
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313 IndexBackend::IndexBackend(OrthancPluginContext* context) : |
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314 context_(context) |
| 0 | 315 { |
| 316 } | |
| 317 | |
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318 |
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319 void IndexBackend::SetOutputFactory(IDatabaseBackendOutput::IFactory* factory) |
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320 { |
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321 boost::unique_lock<boost::shared_mutex> lock(outputFactoryMutex_); |
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322 |
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323 if (factory == NULL) |
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324 { |
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325 throw Orthanc::OrthancException(Orthanc::ErrorCode_NullPointer); |
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326 } |
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327 else if (outputFactory_.get() != NULL) |
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328 { |
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329 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls); |
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330 } |
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331 else |
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332 { |
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333 outputFactory_.reset(factory); |
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334 } |
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335 } |
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336 |
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337 |
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338 IDatabaseBackendOutput* IndexBackend::CreateOutput() |
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339 { |
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340 boost::shared_lock<boost::shared_mutex> lock(outputFactoryMutex_); |
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341 |
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342 if (outputFactory_.get() == NULL) |
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343 { |
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344 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls); |
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345 } |
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346 else |
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347 { |
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348 return outputFactory_->CreateOutput(); |
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349 } |
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350 } |
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351 |
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352 |
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353 void IndexBackend::AddAttachment(DatabaseManager& manager, |
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354 int64_t id, |
| 0 | 355 const OrthancPluginAttachment& attachment) |
| 356 { | |
| 357 DatabaseManager::CachedStatement statement( | |
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358 STATEMENT_FROM_HERE, manager, |
| 0 | 359 "INSERT INTO AttachedFiles VALUES(${id}, ${type}, ${uuid}, " |
| 360 "${compressed}, ${uncompressed}, ${compression}, ${hash}, ${hash-compressed})"); | |
| 361 | |
| 362 statement.SetParameterType("id", ValueType_Integer64); | |
| 363 statement.SetParameterType("type", ValueType_Integer64); | |
| 364 statement.SetParameterType("uuid", ValueType_Utf8String); | |
| 365 statement.SetParameterType("compressed", ValueType_Integer64); | |
| 366 statement.SetParameterType("uncompressed", ValueType_Integer64); | |
| 367 statement.SetParameterType("compression", ValueType_Integer64); | |
| 368 statement.SetParameterType("hash", ValueType_Utf8String); | |
| 369 statement.SetParameterType("hash-compressed", ValueType_Utf8String); | |
| 370 | |
| 371 Dictionary args; | |
| 372 args.SetIntegerValue("id", id); | |
| 373 args.SetIntegerValue("type", attachment.contentType); | |
| 374 args.SetUtf8Value("uuid", attachment.uuid); | |
| 375 args.SetIntegerValue("compressed", attachment.compressedSize); | |
| 376 args.SetIntegerValue("uncompressed", attachment.uncompressedSize); | |
| 377 args.SetIntegerValue("compression", attachment.compressionType); | |
| 378 args.SetUtf8Value("hash", attachment.uncompressedHash); | |
| 379 args.SetUtf8Value("hash-compressed", attachment.compressedHash); | |
| 380 | |
| 381 statement.Execute(args); | |
| 382 } | |
| 383 | |
| 384 | |
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385 void IndexBackend::AttachChild(DatabaseManager& manager, |
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386 int64_t parent, |
| 0 | 387 int64_t child) |
| 388 { | |
| 389 DatabaseManager::CachedStatement statement( | |
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390 STATEMENT_FROM_HERE, manager, |
| 0 | 391 "UPDATE Resources SET parentId = ${parent} WHERE internalId = ${child}"); |
| 392 | |
| 393 statement.SetParameterType("parent", ValueType_Integer64); | |
| 394 statement.SetParameterType("child", ValueType_Integer64); | |
| 395 | |
| 396 Dictionary args; | |
| 397 args.SetIntegerValue("parent", parent); | |
| 398 args.SetIntegerValue("child", child); | |
| 399 | |
| 400 statement.Execute(args); | |
| 401 } | |
| 402 | |
| 403 | |
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404 void IndexBackend::ClearChanges(DatabaseManager& manager) |
| 0 | 405 { |
| 406 DatabaseManager::CachedStatement statement( | |
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407 STATEMENT_FROM_HERE, manager, |
| 0 | 408 "DELETE FROM Changes"); |
| 409 | |
| 410 statement.Execute(); | |
| 411 } | |
| 412 | |
| 413 | |
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414 void IndexBackend::ClearExportedResources(DatabaseManager& manager) |
| 0 | 415 { |
| 416 DatabaseManager::CachedStatement statement( | |
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417 STATEMENT_FROM_HERE, manager, |
| 0 | 418 "DELETE FROM ExportedResources"); |
| 419 | |
| 420 statement.Execute(); | |
| 421 } | |
| 422 | |
| 423 | |
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424 void IndexBackend::DeleteAttachment(IDatabaseBackendOutput& output, |
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425 DatabaseManager& manager, |
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426 int64_t id, |
| 0 | 427 int32_t attachment) |
| 428 { | |
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429 ClearDeletedFiles(manager); |
| 0 | 430 |
| 431 { | |
| 432 DatabaseManager::CachedStatement statement( | |
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433 STATEMENT_FROM_HERE, manager, |
| 0 | 434 "DELETE FROM AttachedFiles WHERE id=${id} AND fileType=${type}"); |
| 435 | |
| 436 statement.SetParameterType("id", ValueType_Integer64); | |
| 437 statement.SetParameterType("type", ValueType_Integer64); | |
| 438 | |
| 439 Dictionary args; | |
| 440 args.SetIntegerValue("id", id); | |
| 441 args.SetIntegerValue("type", static_cast<int>(attachment)); | |
| 442 | |
| 443 statement.Execute(args); | |
| 444 } | |
| 445 | |
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446 SignalDeletedFiles(output, manager); |
| 0 | 447 } |
| 448 | |
| 449 | |
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450 void IndexBackend::DeleteMetadata(DatabaseManager& manager, |
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451 int64_t id, |
| 0 | 452 int32_t metadataType) |
| 453 { | |
| 454 DatabaseManager::CachedStatement statement( | |
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455 STATEMENT_FROM_HERE, manager, |
| 0 | 456 "DELETE FROM Metadata WHERE id=${id} and type=${type}"); |
| 457 | |
| 458 statement.SetParameterType("id", ValueType_Integer64); | |
| 459 statement.SetParameterType("type", ValueType_Integer64); | |
| 460 | |
| 461 Dictionary args; | |
| 462 args.SetIntegerValue("id", id); | |
| 463 args.SetIntegerValue("type", static_cast<int>(metadataType)); | |
| 464 | |
| 465 statement.Execute(args); | |
| 466 } | |
| 467 | |
| 468 | |
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469 void IndexBackend::DeleteResource(IDatabaseBackendOutput& output, |
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470 DatabaseManager& manager, |
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471 int64_t id) |
| 0 | 472 { |
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473 assert(manager.GetDialect() != Dialect_MySQL); |
| 0 | 474 |
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475 ClearDeletedFiles(manager); |
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476 ClearDeletedResources(manager); |
| 0 | 477 |
| 478 { | |
| 479 DatabaseManager::CachedStatement statement( | |
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480 STATEMENT_FROM_HERE, manager, |
| 0 | 481 "DELETE FROM RemainingAncestor"); |
| 482 | |
| 483 statement.Execute(); | |
| 484 } | |
| 485 | |
| 486 { | |
| 487 DatabaseManager::CachedStatement statement( | |
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488 STATEMENT_FROM_HERE, manager, |
| 0 | 489 "DELETE FROM Resources WHERE internalId=${id}"); |
| 490 | |
| 491 statement.SetParameterType("id", ValueType_Integer64); | |
| 492 | |
| 493 Dictionary args; | |
| 494 args.SetIntegerValue("id", id); | |
| 495 | |
| 496 statement.Execute(args); | |
| 497 } | |
| 498 | |
| 499 | |
| 500 { | |
| 501 DatabaseManager::CachedStatement statement( | |
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502 STATEMENT_FROM_HERE, manager, |
| 0 | 503 "SELECT * FROM RemainingAncestor"); |
| 504 | |
| 505 statement.Execute(); | |
| 506 | |
| 507 if (!statement.IsDone()) | |
| 508 { | |
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509 output.SignalRemainingAncestor( |
| 0 | 510 ReadString(statement, 1), |
| 511 static_cast<OrthancPluginResourceType>(ReadInteger32(statement, 0))); | |
| 512 | |
| 513 // There is at most 1 remaining ancestor | |
| 514 assert((statement.Next(), statement.IsDone())); | |
| 515 } | |
| 516 } | |
| 517 | |
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518 SignalDeletedFiles(output, manager); |
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519 SignalDeletedResources(output, manager); |
| 0 | 520 } |
| 521 | |
| 522 | |
| 523 void IndexBackend::GetAllInternalIds(std::list<int64_t>& target, | |
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524 DatabaseManager& manager, |
| 0 | 525 OrthancPluginResourceType resourceType) |
| 526 { | |
| 527 DatabaseManager::CachedStatement statement( | |
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528 STATEMENT_FROM_HERE, manager, |
| 0 | 529 "SELECT internalId FROM Resources WHERE resourceType=${type}"); |
| 530 | |
| 531 statement.SetReadOnly(true); | |
| 532 statement.SetParameterType("type", ValueType_Integer64); | |
| 533 | |
| 534 Dictionary args; | |
| 535 args.SetIntegerValue("type", static_cast<int>(resourceType)); | |
| 536 | |
| 537 ReadListOfIntegers<int64_t>(target, statement, args); | |
| 538 } | |
| 539 | |
| 540 | |
| 541 void IndexBackend::GetAllPublicIds(std::list<std::string>& target, | |
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542 DatabaseManager& manager, |
| 0 | 543 OrthancPluginResourceType resourceType) |
| 544 { | |
| 545 DatabaseManager::CachedStatement statement( | |
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546 STATEMENT_FROM_HERE, manager, |
| 0 | 547 "SELECT publicId FROM Resources WHERE resourceType=${type}"); |
| 548 | |
| 549 statement.SetReadOnly(true); | |
| 550 statement.SetParameterType("type", ValueType_Integer64); | |
| 551 | |
| 552 Dictionary args; | |
| 553 args.SetIntegerValue("type", static_cast<int>(resourceType)); | |
| 554 | |
| 555 ReadListOfStrings(target, statement, args); | |
| 556 } | |
| 557 | |
| 558 | |
| 559 void IndexBackend::GetAllPublicIds(std::list<std::string>& target, | |
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560 DatabaseManager& manager, |
| 0 | 561 OrthancPluginResourceType resourceType, |
| 562 uint64_t since, | |
| 563 uint64_t limit) | |
| 564 { | |
| 565 DatabaseManager::CachedStatement statement( | |
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566 STATEMENT_FROM_HERE, manager, |
| 0 | 567 "SELECT publicId FROM (SELECT publicId FROM Resources " |
| 568 "WHERE resourceType=${type}) AS tmp " | |
| 569 "ORDER BY tmp.publicId LIMIT ${limit} OFFSET ${since}"); | |
| 570 | |
| 571 statement.SetReadOnly(true); | |
| 572 statement.SetParameterType("type", ValueType_Integer64); | |
| 573 statement.SetParameterType("limit", ValueType_Integer64); | |
| 574 statement.SetParameterType("since", ValueType_Integer64); | |
| 575 | |
| 576 Dictionary args; | |
| 577 args.SetIntegerValue("type", static_cast<int>(resourceType)); | |
| 578 args.SetIntegerValue("limit", limit); | |
| 579 args.SetIntegerValue("since", since); | |
| 580 | |
| 581 ReadListOfStrings(target, statement, args); | |
| 582 } | |
| 583 | |
| 584 | |
| 585 /* Use GetOutput().AnswerChange() */ | |
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586 void IndexBackend::GetChanges(IDatabaseBackendOutput& output, |
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587 bool& done /*out*/, |
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588 DatabaseManager& manager, |
| 0 | 589 int64_t since, |
| 590 uint32_t maxResults) | |
| 591 { | |
| 592 DatabaseManager::CachedStatement statement( | |
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593 STATEMENT_FROM_HERE, manager, |
| 0 | 594 "SELECT * FROM Changes WHERE seq>${since} ORDER BY seq LIMIT ${limit}"); |
| 595 | |
| 596 statement.SetReadOnly(true); | |
| 597 statement.SetParameterType("limit", ValueType_Integer64); | |
| 598 statement.SetParameterType("since", ValueType_Integer64); | |
| 599 | |
| 600 Dictionary args; | |
| 601 args.SetIntegerValue("limit", maxResults + 1); | |
| 602 args.SetIntegerValue("since", since); | |
| 603 | |
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604 ReadChangesInternal(output, done, manager, statement, args, maxResults); |
| 0 | 605 } |
| 606 | |
| 607 | |
| 608 void IndexBackend::GetChildrenInternalId(std::list<int64_t>& target /*out*/, | |
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609 DatabaseManager& manager, |
| 0 | 610 int64_t id) |
| 611 { | |
| 612 DatabaseManager::CachedStatement statement( | |
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613 STATEMENT_FROM_HERE, manager, |
| 0 | 614 "SELECT a.internalId FROM Resources AS a, Resources AS b " |
| 615 "WHERE a.parentId = b.internalId AND b.internalId = ${id}"); | |
| 616 | |
| 617 statement.SetReadOnly(true); | |
| 618 statement.SetParameterType("id", ValueType_Integer64); | |
| 619 | |
| 620 Dictionary args; | |
| 621 args.SetIntegerValue("id", id); | |
| 622 | |
| 623 ReadListOfIntegers<int64_t>(target, statement, args); | |
| 624 } | |
| 625 | |
| 626 | |
| 627 void IndexBackend::GetChildrenPublicId(std::list<std::string>& target /*out*/, | |
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628 DatabaseManager& manager, |
| 0 | 629 int64_t id) |
| 630 { | |
| 631 DatabaseManager::CachedStatement statement( | |
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632 STATEMENT_FROM_HERE, manager, |
| 0 | 633 "SELECT a.publicId FROM Resources AS a, Resources AS b " |
| 634 "WHERE a.parentId = b.internalId AND b.internalId = ${id}"); | |
| 635 | |
| 636 statement.SetReadOnly(true); | |
| 637 statement.SetParameterType("id", ValueType_Integer64); | |
| 638 | |
| 639 Dictionary args; | |
| 640 args.SetIntegerValue("id", id); | |
| 641 | |
| 642 ReadListOfStrings(target, statement, args); | |
| 643 } | |
| 644 | |
| 645 | |
| 646 /* Use GetOutput().AnswerExportedResource() */ | |
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647 void IndexBackend::GetExportedResources(IDatabaseBackendOutput& output, |
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648 bool& done /*out*/, |
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649 DatabaseManager& manager, |
| 0 | 650 int64_t since, |
| 651 uint32_t maxResults) | |
| 652 { | |
| 653 DatabaseManager::CachedStatement statement( | |
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654 STATEMENT_FROM_HERE, manager, |
| 0 | 655 "SELECT * FROM ExportedResources WHERE seq>${since} ORDER BY seq LIMIT ${limit}"); |
| 656 | |
| 657 statement.SetReadOnly(true); | |
| 658 statement.SetParameterType("limit", ValueType_Integer64); | |
| 659 statement.SetParameterType("since", ValueType_Integer64); | |
| 660 | |
| 661 Dictionary args; | |
| 662 args.SetIntegerValue("limit", maxResults + 1); | |
| 663 args.SetIntegerValue("since", since); | |
| 664 | |
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665 ReadExportedResourcesInternal(output, done, statement, args, maxResults); |
| 0 | 666 } |
| 667 | |
| 668 | |
| 669 /* Use GetOutput().AnswerChange() */ | |
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670 void IndexBackend::GetLastChange(IDatabaseBackendOutput& output, |
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671 DatabaseManager& manager) |
| 0 | 672 { |
| 673 DatabaseManager::CachedStatement statement( | |
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674 STATEMENT_FROM_HERE, manager, |
| 0 | 675 "SELECT * FROM Changes ORDER BY seq DESC LIMIT 1"); |
| 676 | |
| 677 statement.SetReadOnly(true); | |
| 678 | |
| 679 Dictionary args; | |
| 680 | |
| 681 bool done; // Ignored | |
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682 ReadChangesInternal(output, done, manager, statement, args, 1); |
| 0 | 683 } |
| 684 | |
| 685 | |
| 686 /* Use GetOutput().AnswerExportedResource() */ | |
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687 void IndexBackend::GetLastExportedResource(IDatabaseBackendOutput& output, |
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688 DatabaseManager& manager) |
| 0 | 689 { |
| 690 DatabaseManager::CachedStatement statement( | |
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691 STATEMENT_FROM_HERE, manager, |
| 0 | 692 "SELECT * FROM ExportedResources ORDER BY seq DESC LIMIT 1"); |
| 693 | |
| 694 statement.SetReadOnly(true); | |
| 695 | |
| 696 Dictionary args; | |
| 697 | |
| 698 bool done; // Ignored | |
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699 ReadExportedResourcesInternal(output, done, statement, args, 1); |
| 0 | 700 } |
| 701 | |
| 702 | |
| 703 /* Use GetOutput().AnswerDicomTag() */ | |
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704 void IndexBackend::GetMainDicomTags(IDatabaseBackendOutput& output, |
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705 DatabaseManager& manager, |
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706 int64_t id) |
| 0 | 707 { |
| 708 DatabaseManager::CachedStatement statement( | |
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709 STATEMENT_FROM_HERE, manager, |
| 0 | 710 "SELECT * FROM MainDicomTags WHERE id=${id}"); |
| 711 | |
| 712 statement.SetReadOnly(true); | |
| 713 statement.SetParameterType("id", ValueType_Integer64); | |
| 714 | |
| 715 Dictionary args; | |
| 716 args.SetIntegerValue("id", id); | |
| 717 | |
| 718 statement.Execute(args); | |
| 719 | |
| 720 while (!statement.IsDone()) | |
| 721 { | |
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722 output.AnswerDicomTag(static_cast<uint16_t>(ReadInteger64(statement, 1)), |
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723 static_cast<uint16_t>(ReadInteger64(statement, 2)), |
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724 ReadString(statement, 3)); |
| 0 | 725 statement.Next(); |
| 726 } | |
| 727 } | |
| 728 | |
| 729 | |
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730 std::string IndexBackend::GetPublicId(DatabaseManager& manager, |
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731 int64_t resourceId) |
| 0 | 732 { |
| 733 DatabaseManager::CachedStatement statement( | |
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734 STATEMENT_FROM_HERE, manager, |
| 0 | 735 "SELECT publicId FROM Resources WHERE internalId=${id}"); |
| 736 | |
| 737 statement.SetReadOnly(true); | |
| 738 statement.SetParameterType("id", ValueType_Integer64); | |
| 739 | |
| 740 Dictionary args; | |
| 741 args.SetIntegerValue("id", resourceId); | |
| 742 | |
| 743 statement.Execute(args); | |
| 744 | |
| 745 if (statement.IsDone()) | |
| 746 { | |
| 747 throw Orthanc::OrthancException(Orthanc::ErrorCode_UnknownResource); | |
| 748 } | |
| 749 else | |
| 750 { | |
| 751 return ReadString(statement, 0); | |
| 752 } | |
| 753 } | |
| 754 | |
| 755 | |
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756 uint64_t IndexBackend::GetResourcesCount(DatabaseManager& manager, |
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757 OrthancPluginResourceType resourceType) |
| 0 | 758 { |
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759 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 760 |
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761 switch (manager.GetDialect()) |
| 0 | 762 { |
| 763 case Dialect_MySQL: | |
| 764 statement.reset(new DatabaseManager::CachedStatement( | |
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765 STATEMENT_FROM_HERE, manager, |
| 0 | 766 "SELECT CAST(COUNT(*) AS UNSIGNED INT) FROM Resources WHERE resourceType=${type}")); |
| 767 break; | |
| 768 | |
| 769 case Dialect_PostgreSQL: | |
| 770 statement.reset(new DatabaseManager::CachedStatement( | |
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771 STATEMENT_FROM_HERE, manager, |
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772 "SELECT CAST(COUNT(*) AS BIGINT) FROM Resources WHERE resourceType=${type}")); |
| 0 | 773 break; |
| 774 | |
| 775 case Dialect_SQLite: | |
| 776 statement.reset(new DatabaseManager::CachedStatement( | |
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777 STATEMENT_FROM_HERE, manager, |
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778 "SELECT COUNT(*) FROM Resources WHERE resourceType=${type}")); |
| 0 | 779 break; |
| 780 | |
| 781 default: | |
| 782 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 783 } | |
| 784 | |
| 785 statement->SetReadOnly(true); | |
| 786 statement->SetParameterType("type", ValueType_Integer64); | |
| 787 | |
| 788 Dictionary args; | |
| 789 args.SetIntegerValue("type", resourceType); | |
| 790 | |
| 791 statement->Execute(args); | |
| 792 | |
| 793 return static_cast<uint64_t>(ReadInteger64(*statement, 0)); | |
| 794 } | |
| 795 | |
| 796 | |
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797 OrthancPluginResourceType IndexBackend::GetResourceType(DatabaseManager& manager, |
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798 int64_t resourceId) |
| 0 | 799 { |
| 800 DatabaseManager::CachedStatement statement( | |
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801 STATEMENT_FROM_HERE, manager, |
| 0 | 802 "SELECT resourceType FROM Resources WHERE internalId=${id}"); |
| 803 | |
| 804 statement.SetReadOnly(true); | |
| 805 statement.SetParameterType("id", ValueType_Integer64); | |
| 806 | |
| 807 Dictionary args; | |
| 808 args.SetIntegerValue("id", resourceId); | |
| 809 | |
| 810 statement.Execute(args); | |
| 811 | |
| 812 if (statement.IsDone()) | |
| 813 { | |
| 814 throw Orthanc::OrthancException(Orthanc::ErrorCode_UnknownResource); | |
| 815 } | |
| 816 else | |
| 817 { | |
| 818 return static_cast<OrthancPluginResourceType>(ReadInteger32(statement, 0)); | |
| 819 } | |
| 820 } | |
| 821 | |
| 822 | |
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823 uint64_t IndexBackend::GetTotalCompressedSize(DatabaseManager& manager) |
| 0 | 824 { |
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825 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 826 |
| 827 // NB: "COALESCE" is used to replace "NULL" by "0" if the number of rows is empty | |
| 828 | |
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829 switch (manager.GetDialect()) |
| 0 | 830 { |
| 831 case Dialect_MySQL: | |
| 832 statement.reset(new DatabaseManager::CachedStatement( | |
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833 STATEMENT_FROM_HERE, manager, |
| 0 | 834 "SELECT CAST(COALESCE(SUM(compressedSize), 0) AS UNSIGNED INTEGER) FROM AttachedFiles")); |
| 835 break; | |
| 836 | |
| 837 case Dialect_PostgreSQL: | |
| 838 statement.reset(new DatabaseManager::CachedStatement( | |
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839 STATEMENT_FROM_HERE, manager, |
| 0 | 840 "SELECT CAST(COALESCE(SUM(compressedSize), 0) AS BIGINT) FROM AttachedFiles")); |
| 841 break; | |
| 842 | |
| 843 case Dialect_SQLite: | |
| 844 statement.reset(new DatabaseManager::CachedStatement( | |
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845 STATEMENT_FROM_HERE, manager, |
| 0 | 846 "SELECT COALESCE(SUM(compressedSize), 0) FROM AttachedFiles")); |
| 847 break; | |
| 848 | |
| 849 default: | |
| 850 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 851 } | |
| 852 | |
| 853 statement->SetReadOnly(true); | |
| 854 statement->Execute(); | |
| 855 | |
| 856 return static_cast<uint64_t>(ReadInteger64(*statement, 0)); | |
| 857 } | |
| 858 | |
| 859 | |
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860 uint64_t IndexBackend::GetTotalUncompressedSize(DatabaseManager& manager) |
| 0 | 861 { |
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862 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 863 |
| 864 // NB: "COALESCE" is used to replace "NULL" by "0" if the number of rows is empty | |
| 865 | |
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866 switch (manager.GetDialect()) |
| 0 | 867 { |
| 868 case Dialect_MySQL: | |
| 869 statement.reset(new DatabaseManager::CachedStatement( | |
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870 STATEMENT_FROM_HERE, manager, |
| 0 | 871 "SELECT CAST(COALESCE(SUM(uncompressedSize), 0) AS UNSIGNED INTEGER) FROM AttachedFiles")); |
| 872 break; | |
| 873 | |
| 874 case Dialect_PostgreSQL: | |
| 875 statement.reset(new DatabaseManager::CachedStatement( | |
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876 STATEMENT_FROM_HERE, manager, |
| 0 | 877 "SELECT CAST(COALESCE(SUM(uncompressedSize), 0) AS BIGINT) FROM AttachedFiles")); |
| 878 break; | |
| 879 | |
| 880 case Dialect_SQLite: | |
| 881 statement.reset(new DatabaseManager::CachedStatement( | |
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882 STATEMENT_FROM_HERE, manager, |
| 0 | 883 "SELECT COALESCE(SUM(uncompressedSize), 0) FROM AttachedFiles")); |
| 884 break; | |
| 885 | |
| 886 default: | |
| 887 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 888 } | |
| 889 | |
| 890 statement->SetReadOnly(true); | |
| 891 statement->Execute(); | |
| 892 | |
| 893 return static_cast<uint64_t>(ReadInteger64(*statement, 0)); | |
| 894 } | |
| 895 | |
| 896 | |
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897 bool IndexBackend::IsExistingResource(DatabaseManager& manager, |
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898 int64_t internalId) |
| 0 | 899 { |
| 900 DatabaseManager::CachedStatement statement( | |
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901 STATEMENT_FROM_HERE, manager, |
| 0 | 902 "SELECT * FROM Resources WHERE internalId=${id}"); |
| 903 | |
| 904 statement.SetReadOnly(true); | |
| 905 statement.SetParameterType("id", ValueType_Integer64); | |
| 906 | |
| 907 Dictionary args; | |
| 908 args.SetIntegerValue("id", internalId); | |
| 909 | |
| 910 statement.Execute(args); | |
| 911 | |
| 912 return !statement.IsDone(); | |
| 913 } | |
| 914 | |
| 915 | |
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916 bool IndexBackend::IsProtectedPatient(DatabaseManager& manager, |
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917 int64_t internalId) |
| 0 | 918 { |
| 919 DatabaseManager::CachedStatement statement( | |
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920 STATEMENT_FROM_HERE, manager, |
| 0 | 921 "SELECT * FROM PatientRecyclingOrder WHERE patientId = ${id}"); |
| 922 | |
| 923 statement.SetReadOnly(true); | |
| 924 statement.SetParameterType("id", ValueType_Integer64); | |
| 925 | |
| 926 Dictionary args; | |
| 927 args.SetIntegerValue("id", internalId); | |
| 928 | |
| 929 statement.Execute(args); | |
| 930 | |
| 931 return statement.IsDone(); | |
| 932 } | |
| 933 | |
| 934 | |
| 935 void IndexBackend::ListAvailableMetadata(std::list<int32_t>& target /*out*/, | |
|
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936 DatabaseManager& manager, |
| 0 | 937 int64_t id) |
| 938 { | |
| 939 DatabaseManager::CachedStatement statement( | |
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940 STATEMENT_FROM_HERE, manager, |
| 0 | 941 "SELECT type FROM Metadata WHERE id=${id}"); |
| 942 | |
| 943 statement.SetReadOnly(true); | |
| 944 statement.SetParameterType("id", ValueType_Integer64); | |
| 945 | |
| 946 Dictionary args; | |
| 947 args.SetIntegerValue("id", id); | |
| 948 | |
| 949 ReadListOfIntegers<int32_t>(target, statement, args); | |
| 950 } | |
| 951 | |
| 952 | |
| 953 void IndexBackend::ListAvailableAttachments(std::list<int32_t>& target /*out*/, | |
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954 DatabaseManager& manager, |
| 0 | 955 int64_t id) |
| 956 { | |
| 957 DatabaseManager::CachedStatement statement( | |
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958 STATEMENT_FROM_HERE, manager, |
| 0 | 959 "SELECT fileType FROM AttachedFiles WHERE id=${id}"); |
| 960 | |
| 961 statement.SetReadOnly(true); | |
| 962 statement.SetParameterType("id", ValueType_Integer64); | |
| 963 | |
| 964 Dictionary args; | |
| 965 args.SetIntegerValue("id", id); | |
| 966 | |
| 967 ReadListOfIntegers<int32_t>(target, statement, args); | |
| 968 } | |
| 969 | |
| 970 | |
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971 void IndexBackend::LogChange(DatabaseManager& manager, |
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972 int32_t changeType, |
| 209 | 973 int64_t resourceId, |
| 974 OrthancPluginResourceType resourceType, | |
| 975 const char* date) | |
| 0 | 976 { |
| 977 DatabaseManager::CachedStatement statement( | |
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978 STATEMENT_FROM_HERE, manager, |
| 0 | 979 "INSERT INTO Changes VALUES(${}, ${changeType}, ${id}, ${resourceType}, ${date})"); |
| 980 | |
| 981 statement.SetParameterType("changeType", ValueType_Integer64); | |
| 982 statement.SetParameterType("id", ValueType_Integer64); | |
| 983 statement.SetParameterType("resourceType", ValueType_Integer64); | |
| 984 statement.SetParameterType("date", ValueType_Utf8String); | |
| 985 | |
| 986 Dictionary args; | |
| 209 | 987 args.SetIntegerValue("changeType", changeType); |
| 988 args.SetIntegerValue("id", resourceId); | |
| 989 args.SetIntegerValue("resourceType", resourceType); | |
| 990 args.SetUtf8Value("date", date); | |
| 0 | 991 |
| 992 statement.Execute(args); | |
| 993 } | |
| 994 | |
| 995 | |
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996 void IndexBackend::LogExportedResource(DatabaseManager& manager, |
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997 const OrthancPluginExportedResource& resource) |
| 0 | 998 { |
| 999 DatabaseManager::CachedStatement statement( | |
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1000 STATEMENT_FROM_HERE, manager, |
| 0 | 1001 "INSERT INTO ExportedResources VALUES(${}, ${type}, ${publicId}, " |
| 1002 "${modality}, ${patient}, ${study}, ${series}, ${instance}, ${date})"); | |
| 1003 | |
| 1004 statement.SetParameterType("type", ValueType_Integer64); | |
| 1005 statement.SetParameterType("publicId", ValueType_Utf8String); | |
| 1006 statement.SetParameterType("modality", ValueType_Utf8String); | |
| 1007 statement.SetParameterType("patient", ValueType_Utf8String); | |
| 1008 statement.SetParameterType("study", ValueType_Utf8String); | |
| 1009 statement.SetParameterType("series", ValueType_Utf8String); | |
| 1010 statement.SetParameterType("instance", ValueType_Utf8String); | |
| 1011 statement.SetParameterType("date", ValueType_Utf8String); | |
| 1012 | |
| 1013 Dictionary args; | |
| 1014 args.SetIntegerValue("type", resource.resourceType); | |
| 1015 args.SetUtf8Value("publicId", resource.publicId); | |
| 1016 args.SetUtf8Value("modality", resource.modality); | |
| 1017 args.SetUtf8Value("patient", resource.patientId); | |
| 1018 args.SetUtf8Value("study", resource.studyInstanceUid); | |
| 1019 args.SetUtf8Value("series", resource.seriesInstanceUid); | |
| 1020 args.SetUtf8Value("instance", resource.sopInstanceUid); | |
| 1021 args.SetUtf8Value("date", resource.date); | |
| 1022 | |
| 1023 statement.Execute(args); | |
| 1024 } | |
| 1025 | |
| 1026 | |
| 1027 /* Use GetOutput().AnswerAttachment() */ | |
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1028 bool IndexBackend::LookupAttachment(IDatabaseBackendOutput& output, |
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1029 DatabaseManager& manager, |
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1030 int64_t id, |
| 0 | 1031 int32_t contentType) |
| 1032 { | |
| 1033 DatabaseManager::CachedStatement statement( | |
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1034 STATEMENT_FROM_HERE, manager, |
| 0 | 1035 "SELECT uuid, uncompressedSize, compressionType, compressedSize, " |
| 1036 "uncompressedHash, compressedHash FROM AttachedFiles WHERE id=${id} AND fileType=${type}"); | |
| 1037 | |
| 1038 statement.SetReadOnly(true); | |
| 1039 statement.SetParameterType("id", ValueType_Integer64); | |
| 1040 statement.SetParameterType("type", ValueType_Integer64); | |
| 1041 | |
| 1042 Dictionary args; | |
| 1043 args.SetIntegerValue("id", id); | |
| 1044 args.SetIntegerValue("type", static_cast<int>(contentType)); | |
| 1045 | |
| 1046 statement.Execute(args); | |
| 1047 | |
| 1048 if (statement.IsDone()) | |
| 1049 { | |
| 1050 return false; | |
| 1051 } | |
| 1052 else | |
| 1053 { | |
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1054 output.AnswerAttachment(ReadString(statement, 0), |
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1055 contentType, |
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1056 ReadInteger64(statement, 1), |
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1057 ReadString(statement, 4), |
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1058 ReadInteger32(statement, 2), |
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1059 ReadInteger64(statement, 3), |
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1060 ReadString(statement, 5)); |
| 0 | 1061 return true; |
| 1062 } | |
| 1063 } | |
| 1064 | |
| 1065 | |
| 1066 bool IndexBackend::LookupGlobalProperty(std::string& target /*out*/, | |
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1067 DatabaseManager& manager, |
|
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1068 const char* serverIdentifier, |
| 0 | 1069 int32_t property) |
| 1070 { | |
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1071 DatabaseManager::CachedStatement statement( |
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1072 STATEMENT_FROM_HERE, manager, |
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1073 "SELECT value FROM GlobalProperties WHERE property=${property}"); |
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1074 |
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1075 statement.SetReadOnly(true); |
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1076 statement.SetParameterType("property", ValueType_Integer64); |
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1077 |
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1078 Dictionary args; |
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1079 args.SetIntegerValue("property", property); |
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1080 |
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1081 statement.Execute(args); |
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1082 statement.SetResultFieldType(0, ValueType_Utf8String); |
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1083 |
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1084 if (statement.IsDone()) |
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1085 { |
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1086 return false; |
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1087 } |
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1088 else |
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1089 { |
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1090 ValueType type = statement.GetResultField(0).GetType(); |
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1091 |
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1092 if (type == ValueType_Null) |
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1093 { |
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1094 return false; |
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1095 } |
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1096 else if (type != ValueType_Utf8String) |
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1097 { |
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1098 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); |
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1099 } |
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1100 else |
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1101 { |
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1102 target = dynamic_cast<const Utf8StringValue&>(statement.GetResultField(0)).GetContent(); |
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1103 return true; |
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1104 } |
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1105 } |
| 0 | 1106 } |
| 1107 | |
| 1108 | |
| 1109 void IndexBackend::LookupIdentifier(std::list<int64_t>& target /*out*/, | |
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1110 DatabaseManager& manager, |
| 0 | 1111 OrthancPluginResourceType resourceType, |
| 1112 uint16_t group, | |
| 1113 uint16_t element, | |
| 1114 OrthancPluginIdentifierConstraint constraint, | |
| 1115 const char* value) | |
| 1116 { | |
|
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1117 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 1118 |
| 1119 std::string header = | |
| 1120 "SELECT d.id FROM DicomIdentifiers AS d, Resources AS r WHERE " | |
| 1121 "d.id = r.internalId AND r.resourceType=${type} AND d.tagGroup=${group} " | |
| 1122 "AND d.tagElement=${element} AND "; | |
| 1123 | |
| 1124 switch (constraint) | |
| 1125 { | |
| 1126 case OrthancPluginIdentifierConstraint_Equal: | |
| 1127 header += "d.value = ${value}"; | |
| 1128 statement.reset(new DatabaseManager::CachedStatement( | |
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1129 STATEMENT_FROM_HERE, manager, header.c_str())); |
| 0 | 1130 break; |
| 1131 | |
| 1132 case OrthancPluginIdentifierConstraint_SmallerOrEqual: | |
| 1133 header += "d.value <= ${value}"; | |
| 1134 statement.reset(new DatabaseManager::CachedStatement( | |
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1135 STATEMENT_FROM_HERE, manager, header.c_str())); |
| 0 | 1136 break; |
| 1137 | |
| 1138 case OrthancPluginIdentifierConstraint_GreaterOrEqual: | |
| 1139 header += "d.value >= ${value}"; | |
| 1140 statement.reset(new DatabaseManager::CachedStatement( | |
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1141 STATEMENT_FROM_HERE, manager, header.c_str())); |
| 0 | 1142 break; |
| 1143 | |
| 1144 case OrthancPluginIdentifierConstraint_Wildcard: | |
| 1145 header += "d.value LIKE ${value}"; | |
| 1146 statement.reset(new DatabaseManager::CachedStatement( | |
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1147 STATEMENT_FROM_HERE, manager, header.c_str())); |
| 0 | 1148 break; |
| 1149 | |
| 1150 default: | |
| 1151 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); | |
| 1152 } | |
| 1153 | |
| 1154 statement->SetReadOnly(true); | |
| 1155 statement->SetParameterType("type", ValueType_Integer64); | |
| 1156 statement->SetParameterType("group", ValueType_Integer64); | |
| 1157 statement->SetParameterType("element", ValueType_Integer64); | |
| 1158 statement->SetParameterType("value", ValueType_Utf8String); | |
| 1159 | |
| 1160 Dictionary args; | |
| 1161 args.SetIntegerValue("type", resourceType); | |
| 1162 args.SetIntegerValue("group", group); | |
| 1163 args.SetIntegerValue("element", element); | |
| 1164 | |
| 1165 if (constraint == OrthancPluginIdentifierConstraint_Wildcard) | |
| 1166 { | |
| 1167 args.SetUtf8Value("value", ConvertWildcardToLike(value)); | |
| 1168 } | |
| 1169 else | |
| 1170 { | |
| 1171 args.SetUtf8Value("value", value); | |
| 1172 } | |
| 1173 | |
| 1174 statement->Execute(args); | |
| 1175 | |
| 1176 target.clear(); | |
| 1177 while (!statement->IsDone()) | |
| 1178 { | |
| 1179 target.push_back(ReadInteger64(*statement, 0)); | |
| 1180 statement->Next(); | |
| 1181 } | |
| 1182 } | |
| 1183 | |
| 1184 | |
| 1185 void IndexBackend::LookupIdentifierRange(std::list<int64_t>& target /*out*/, | |
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1186 DatabaseManager& manager, |
| 0 | 1187 OrthancPluginResourceType resourceType, |
| 1188 uint16_t group, | |
| 1189 uint16_t element, | |
| 1190 const char* start, | |
| 1191 const char* end) | |
| 1192 { | |
| 1193 DatabaseManager::CachedStatement statement( | |
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1194 STATEMENT_FROM_HERE, manager, |
| 0 | 1195 "SELECT d.id FROM DicomIdentifiers AS d, Resources AS r WHERE " |
| 1196 "d.id = r.internalId AND r.resourceType=${type} AND d.tagGroup=${group} " | |
| 1197 "AND d.tagElement=${element} AND d.value>=${start} AND d.value<=${end}"); | |
| 1198 | |
| 1199 statement.SetReadOnly(true); | |
| 1200 statement.SetParameterType("type", ValueType_Integer64); | |
| 1201 statement.SetParameterType("group", ValueType_Integer64); | |
| 1202 statement.SetParameterType("element", ValueType_Integer64); | |
| 1203 statement.SetParameterType("start", ValueType_Utf8String); | |
| 1204 statement.SetParameterType("end", ValueType_Utf8String); | |
| 1205 | |
| 1206 Dictionary args; | |
| 1207 args.SetIntegerValue("type", resourceType); | |
| 1208 args.SetIntegerValue("group", group); | |
| 1209 args.SetIntegerValue("element", element); | |
| 1210 args.SetUtf8Value("start", start); | |
| 1211 args.SetUtf8Value("end", end); | |
| 1212 | |
| 1213 statement.Execute(args); | |
| 1214 | |
| 1215 target.clear(); | |
| 1216 while (!statement.IsDone()) | |
| 1217 { | |
| 1218 target.push_back(ReadInteger64(statement, 0)); | |
| 1219 statement.Next(); | |
| 1220 } | |
| 1221 } | |
| 1222 | |
| 1223 | |
| 1224 bool IndexBackend::LookupMetadata(std::string& target /*out*/, | |
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1225 DatabaseManager& manager, |
| 0 | 1226 int64_t id, |
| 1227 int32_t metadataType) | |
| 1228 { | |
| 1229 DatabaseManager::CachedStatement statement( | |
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1230 STATEMENT_FROM_HERE, manager, |
| 0 | 1231 "SELECT value FROM Metadata WHERE id=${id} and type=${type}"); |
| 1232 | |
| 1233 statement.SetReadOnly(true); | |
| 1234 statement.SetParameterType("id", ValueType_Integer64); | |
| 1235 statement.SetParameterType("type", ValueType_Integer64); | |
| 1236 | |
| 1237 Dictionary args; | |
| 1238 args.SetIntegerValue("id", id); | |
| 1239 args.SetIntegerValue("type", metadataType); | |
| 1240 | |
| 1241 statement.Execute(args); | |
| 1242 | |
| 1243 if (statement.IsDone()) | |
| 1244 { | |
| 1245 return false; | |
| 1246 } | |
| 1247 else | |
| 1248 { | |
| 1249 target = ReadString(statement, 0); | |
| 1250 return true; | |
| 1251 } | |
| 1252 } | |
| 1253 | |
| 1254 | |
| 1255 bool IndexBackend::LookupParent(int64_t& parentId /*out*/, | |
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1256 DatabaseManager& manager, |
| 0 | 1257 int64_t resourceId) |
| 1258 { | |
| 1259 DatabaseManager::CachedStatement statement( | |
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1260 STATEMENT_FROM_HERE, manager, |
| 0 | 1261 "SELECT parentId FROM Resources WHERE internalId=${id}"); |
| 1262 | |
| 1263 statement.SetReadOnly(true); | |
| 1264 statement.SetParameterType("id", ValueType_Integer64); | |
| 1265 | |
| 1266 Dictionary args; | |
| 1267 args.SetIntegerValue("id", resourceId); | |
| 1268 | |
| 1269 statement.Execute(args); | |
| 1270 | |
| 1271 if (statement.IsDone() || | |
| 1272 statement.GetResultField(0).GetType() == ValueType_Null) | |
| 1273 { | |
| 1274 return false; | |
| 1275 } | |
| 1276 else | |
| 1277 { | |
| 1278 parentId = ReadInteger64(statement, 0); | |
| 1279 return true; | |
| 1280 } | |
| 1281 } | |
| 1282 | |
| 1283 | |
| 1284 bool IndexBackend::LookupResource(int64_t& id /*out*/, | |
| 1285 OrthancPluginResourceType& type /*out*/, | |
|
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1286 DatabaseManager& manager, |
| 0 | 1287 const char* publicId) |
| 1288 { | |
| 1289 DatabaseManager::CachedStatement statement( | |
|
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1290 STATEMENT_FROM_HERE, manager, |
| 0 | 1291 "SELECT internalId, resourceType FROM Resources WHERE publicId=${id}"); |
| 1292 | |
| 1293 statement.SetReadOnly(true); | |
| 1294 statement.SetParameterType("id", ValueType_Utf8String); | |
| 1295 | |
| 1296 Dictionary args; | |
| 1297 args.SetUtf8Value("id", publicId); | |
| 1298 | |
| 1299 statement.Execute(args); | |
| 1300 | |
| 1301 if (statement.IsDone()) | |
| 1302 { | |
| 1303 return false; | |
| 1304 } | |
| 1305 else | |
| 1306 { | |
| 1307 id = ReadInteger64(statement, 0); | |
| 1308 type = static_cast<OrthancPluginResourceType>(ReadInteger32(statement, 1)); | |
| 1309 return true; | |
| 1310 } | |
| 1311 } | |
| 1312 | |
| 1313 | |
|
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1314 bool IndexBackend::SelectPatientToRecycle(int64_t& internalId /*out*/, |
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1315 DatabaseManager& manager) |
| 0 | 1316 { |
| 1317 DatabaseManager::CachedStatement statement( | |
|
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1318 STATEMENT_FROM_HERE, manager, |
| 0 | 1319 "SELECT patientId FROM PatientRecyclingOrder ORDER BY seq ASC LIMIT 1"); |
| 1320 | |
| 1321 statement.SetReadOnly(true); | |
| 1322 statement.Execute(); | |
| 1323 | |
| 1324 if (statement.IsDone()) | |
| 1325 { | |
| 1326 return false; | |
| 1327 } | |
| 1328 else | |
| 1329 { | |
| 1330 internalId = ReadInteger64(statement, 0); | |
| 1331 return true; | |
| 1332 } | |
| 1333 } | |
| 1334 | |
| 1335 | |
| 1336 bool IndexBackend::SelectPatientToRecycle(int64_t& internalId /*out*/, | |
|
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1337 DatabaseManager& manager, |
| 0 | 1338 int64_t patientIdToAvoid) |
| 1339 { | |
| 1340 DatabaseManager::CachedStatement statement( | |
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1341 STATEMENT_FROM_HERE, manager, |
| 0 | 1342 "SELECT patientId FROM PatientRecyclingOrder " |
| 1343 "WHERE patientId != ${id} ORDER BY seq ASC LIMIT 1"); | |
| 1344 | |
| 1345 statement.SetReadOnly(true); | |
| 1346 statement.SetParameterType("id", ValueType_Integer64); | |
| 1347 | |
| 1348 Dictionary args; | |
| 1349 args.SetIntegerValue("id", patientIdToAvoid); | |
| 1350 | |
| 1351 statement.Execute(args); | |
| 1352 | |
| 1353 if (statement.IsDone()) | |
| 1354 { | |
| 1355 return false; | |
| 1356 } | |
| 1357 else | |
| 1358 { | |
| 1359 internalId = ReadInteger64(statement, 0); | |
| 1360 return true; | |
| 1361 } | |
| 1362 } | |
| 1363 | |
| 1364 | |
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1365 void IndexBackend::SetGlobalProperty(DatabaseManager& manager, |
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1366 const char* serverIdentifier, |
|
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1367 int32_t property, |
|
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1368 const char* utf8) |
| 0 | 1369 { |
|
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1370 if (manager.GetDialect() == Dialect_SQLite) |
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1371 { |
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1372 DatabaseManager::CachedStatement statement( |
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1373 STATEMENT_FROM_HERE, manager, |
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1374 "INSERT OR REPLACE INTO GlobalProperties VALUES (${property}, ${value})"); |
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1375 |
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1376 statement.SetParameterType("property", ValueType_Integer64); |
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1377 statement.SetParameterType("value", ValueType_Utf8String); |
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1378 |
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1379 Dictionary args; |
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1380 args.SetIntegerValue("property", static_cast<int>(property)); |
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1381 args.SetUtf8Value("value", utf8); |
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1382 |
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1383 statement.Execute(args); |
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1384 } |
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1385 else |
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1386 { |
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1387 { |
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1388 DatabaseManager::CachedStatement statement( |
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1389 STATEMENT_FROM_HERE, manager, |
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1390 "DELETE FROM GlobalProperties WHERE property=${property}"); |
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1391 |
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1392 statement.SetParameterType("property", ValueType_Integer64); |
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1393 |
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1394 Dictionary args; |
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1395 args.SetIntegerValue("property", property); |
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1396 |
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1397 statement.Execute(args); |
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1398 } |
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1399 |
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1400 { |
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1401 DatabaseManager::CachedStatement statement( |
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1402 STATEMENT_FROM_HERE, manager, |
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1403 "INSERT INTO GlobalProperties VALUES (${property}, ${value})"); |
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1404 |
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1405 statement.SetParameterType("property", ValueType_Integer64); |
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1406 statement.SetParameterType("value", ValueType_Utf8String); |
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1407 |
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1408 Dictionary args; |
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1409 args.SetIntegerValue("property", static_cast<int>(property)); |
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1410 args.SetUtf8Value("value", utf8); |
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1411 |
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1412 statement.Execute(args); |
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1413 } |
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1414 } |
| 0 | 1415 } |
| 1416 | |
| 1417 | |
| 1418 static void ExecuteSetTag(DatabaseManager::CachedStatement& statement, | |
| 1419 int64_t id, | |
| 1420 uint16_t group, | |
| 1421 uint16_t element, | |
| 1422 const char* value) | |
| 1423 { | |
| 1424 statement.SetParameterType("id", ValueType_Integer64); | |
| 1425 statement.SetParameterType("group", ValueType_Integer64); | |
| 1426 statement.SetParameterType("element", ValueType_Integer64); | |
| 1427 statement.SetParameterType("value", ValueType_Utf8String); | |
| 1428 | |
| 1429 Dictionary args; | |
| 1430 args.SetIntegerValue("id", id); | |
| 1431 args.SetIntegerValue("group", group); | |
| 1432 args.SetIntegerValue("element", element); | |
| 1433 args.SetUtf8Value("value", value); | |
| 1434 | |
| 1435 statement.Execute(args); | |
| 1436 } | |
| 1437 | |
| 1438 | |
|
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1439 void IndexBackend::SetMainDicomTag(DatabaseManager& manager, |
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1440 int64_t id, |
| 0 | 1441 uint16_t group, |
| 1442 uint16_t element, | |
| 1443 const char* value) | |
| 1444 { | |
| 1445 DatabaseManager::CachedStatement statement( | |
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1446 STATEMENT_FROM_HERE, manager, |
| 0 | 1447 "INSERT INTO MainDicomTags VALUES(${id}, ${group}, ${element}, ${value})"); |
| 1448 | |
| 1449 ExecuteSetTag(statement, id, group, element, value); | |
| 1450 } | |
| 1451 | |
| 1452 | |
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1453 void IndexBackend::SetIdentifierTag(DatabaseManager& manager, |
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1454 int64_t id, |
| 0 | 1455 uint16_t group, |
| 1456 uint16_t element, | |
| 1457 const char* value) | |
| 1458 { | |
| 1459 DatabaseManager::CachedStatement statement( | |
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1460 STATEMENT_FROM_HERE, manager, |
| 0 | 1461 "INSERT INTO DicomIdentifiers VALUES(${id}, ${group}, ${element}, ${value})"); |
| 1462 | |
| 1463 ExecuteSetTag(statement, id, group, element, value); | |
| 1464 } | |
| 1465 | |
| 1466 | |
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1467 void IndexBackend::SetMetadata(DatabaseManager& manager, |
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1468 int64_t id, |
| 0 | 1469 int32_t metadataType, |
| 1470 const char* value) | |
| 1471 { | |
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1472 if (manager.GetDialect() == Dialect_SQLite) |
| 0 | 1473 { |
| 1474 DatabaseManager::CachedStatement statement( | |
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1475 STATEMENT_FROM_HERE, manager, |
| 0 | 1476 "INSERT OR REPLACE INTO Metadata VALUES (${id}, ${type}, ${value})"); |
| 1477 | |
| 1478 statement.SetParameterType("id", ValueType_Integer64); | |
| 1479 statement.SetParameterType("type", ValueType_Integer64); | |
| 1480 statement.SetParameterType("value", ValueType_Utf8String); | |
| 1481 | |
| 1482 Dictionary args; | |
| 1483 args.SetIntegerValue("id", id); | |
| 1484 args.SetIntegerValue("type", metadataType); | |
| 1485 args.SetUtf8Value("value", value); | |
| 1486 | |
| 1487 statement.Execute(args); | |
| 1488 } | |
| 1489 else | |
| 1490 { | |
| 1491 { | |
| 1492 DatabaseManager::CachedStatement statement( | |
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1493 STATEMENT_FROM_HERE, manager, |
| 0 | 1494 "DELETE FROM Metadata WHERE id=${id} AND type=${type}"); |
| 1495 | |
| 1496 statement.SetParameterType("id", ValueType_Integer64); | |
| 1497 statement.SetParameterType("type", ValueType_Integer64); | |
| 1498 | |
| 1499 Dictionary args; | |
| 1500 args.SetIntegerValue("id", id); | |
| 1501 args.SetIntegerValue("type", metadataType); | |
| 1502 | |
| 1503 statement.Execute(args); | |
| 1504 } | |
| 1505 | |
| 1506 { | |
| 1507 DatabaseManager::CachedStatement statement( | |
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1508 STATEMENT_FROM_HERE, manager, |
| 0 | 1509 "INSERT INTO Metadata VALUES (${id}, ${type}, ${value})"); |
| 1510 | |
| 1511 statement.SetParameterType("id", ValueType_Integer64); | |
| 1512 statement.SetParameterType("type", ValueType_Integer64); | |
| 1513 statement.SetParameterType("value", ValueType_Utf8String); | |
| 1514 | |
| 1515 Dictionary args; | |
| 1516 args.SetIntegerValue("id", id); | |
| 1517 args.SetIntegerValue("type", metadataType); | |
| 1518 args.SetUtf8Value("value", value); | |
| 1519 | |
| 1520 statement.Execute(args); | |
| 1521 } | |
| 1522 } | |
| 1523 } | |
| 1524 | |
| 1525 | |
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1526 void IndexBackend::SetProtectedPatient(DatabaseManager& manager, |
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|
1527 int64_t internalId, |
| 0 | 1528 bool isProtected) |
| 1529 { | |
| 1530 if (isProtected) | |
| 1531 { | |
| 1532 DatabaseManager::CachedStatement statement( | |
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|
1533 STATEMENT_FROM_HERE, manager, |
| 0 | 1534 "DELETE FROM PatientRecyclingOrder WHERE patientId=${id}"); |
| 1535 | |
| 1536 statement.SetParameterType("id", ValueType_Integer64); | |
| 1537 | |
| 1538 Dictionary args; | |
| 1539 args.SetIntegerValue("id", internalId); | |
| 1540 | |
| 1541 statement.Execute(args); | |
| 1542 } | |
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1543 else if (IsProtectedPatient(manager, internalId)) |
| 0 | 1544 { |
| 1545 DatabaseManager::CachedStatement statement( | |
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1546 STATEMENT_FROM_HERE, manager, |
| 0 | 1547 "INSERT INTO PatientRecyclingOrder VALUES(${}, ${id})"); |
| 1548 | |
| 1549 statement.SetParameterType("id", ValueType_Integer64); | |
| 1550 | |
| 1551 Dictionary args; | |
| 1552 args.SetIntegerValue("id", internalId); | |
| 1553 | |
| 1554 statement.Execute(args); | |
| 1555 } | |
| 1556 else | |
| 1557 { | |
| 1558 // Nothing to do: The patient is already unprotected | |
| 1559 } | |
| 1560 } | |
| 1561 | |
| 1562 | |
|
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1563 uint32_t IndexBackend::GetDatabaseVersion(DatabaseManager& manager) |
| 0 | 1564 { |
|
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1565 // Create a read-only, explicit transaction to read the database |
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1566 // version (this was a read-write, implicit transaction in |
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1567 // PostgreSQL plugin <= 3.3 and MySQL plugin <= 3.0) |
|
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1568 DatabaseManager::Transaction transaction(manager, TransactionType_ReadOnly); |
|
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1569 |
| 0 | 1570 std::string version = "unknown"; |
| 1571 | |
|
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1572 if (LookupGlobalProperty(version, manager, MISSING_SERVER_IDENTIFIER, Orthanc::GlobalProperty_DatabaseSchemaVersion)) |
| 0 | 1573 { |
| 1574 try | |
| 1575 { | |
| 1576 return boost::lexical_cast<unsigned int>(version); | |
| 1577 } | |
| 1578 catch (boost::bad_lexical_cast&) | |
| 1579 { | |
| 1580 } | |
| 1581 } | |
| 1582 | |
| 1583 LOG(ERROR) << "The database is corrupted. Drop it manually for Orthanc to recreate it"; | |
| 1584 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); | |
| 1585 } | |
| 1586 | |
| 1587 | |
| 1588 /** | |
| 1589 * Upgrade the database to the specified version of the database | |
| 1590 * schema. The upgrade script is allowed to make calls to | |
| 1591 * OrthancPluginReconstructMainDicomTags(). | |
| 1592 **/ | |
|
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1593 void IndexBackend::UpgradeDatabase(DatabaseManager& manager, |
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|
1594 uint32_t targetVersion, |
| 0 | 1595 OrthancPluginStorageArea* storageArea) |
| 1596 { | |
| 1597 LOG(ERROR) << "Upgrading database is not implemented by this plugin"; | |
| 1598 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 1599 } | |
| 1600 | |
| 1601 | |
|
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|
1602 void IndexBackend::ClearMainDicomTags(DatabaseManager& manager, |
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|
1603 int64_t internalId) |
| 0 | 1604 { |
| 1605 { | |
| 1606 DatabaseManager::CachedStatement statement( | |
|
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|
1607 STATEMENT_FROM_HERE, manager, |
| 0 | 1608 "DELETE FROM MainDicomTags WHERE id=${id}"); |
| 1609 | |
| 1610 statement.SetParameterType("id", ValueType_Integer64); | |
| 1611 | |
| 1612 Dictionary args; | |
| 1613 args.SetIntegerValue("id", internalId); | |
| 1614 | |
| 1615 statement.Execute(args); | |
| 1616 } | |
| 1617 | |
| 1618 { | |
| 1619 DatabaseManager::CachedStatement statement( | |
|
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|
1620 STATEMENT_FROM_HERE, manager, |
| 0 | 1621 "DELETE FROM DicomIdentifiers WHERE id=${id}"); |
| 1622 | |
| 1623 statement.SetParameterType("id", ValueType_Integer64); | |
| 1624 | |
| 1625 Dictionary args; | |
| 1626 args.SetIntegerValue("id", internalId); | |
| 1627 | |
| 1628 statement.Execute(args); | |
| 1629 } | |
| 1630 } | |
| 1631 | |
| 1632 | |
| 1633 // For unit testing only! | |
|
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1634 uint64_t IndexBackend::GetAllResourcesCount(DatabaseManager& manager) |
| 0 | 1635 { |
|
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|
1636 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 1637 |
|
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|
1638 switch (manager.GetDialect()) |
| 0 | 1639 { |
| 1640 case Dialect_MySQL: | |
| 1641 statement.reset(new DatabaseManager::CachedStatement( | |
|
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|
1642 STATEMENT_FROM_HERE, manager, |
| 0 | 1643 "SELECT CAST(COUNT(*) AS UNSIGNED INT) FROM Resources")); |
| 1644 break; | |
| 1645 | |
| 1646 case Dialect_PostgreSQL: | |
| 1647 statement.reset(new DatabaseManager::CachedStatement( | |
|
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|
1648 STATEMENT_FROM_HERE, manager, |
| 0 | 1649 "SELECT CAST(COUNT(*) AS BIGINT) FROM Resources")); |
| 1650 break; | |
| 1651 | |
| 1652 case Dialect_SQLite: | |
| 1653 statement.reset(new DatabaseManager::CachedStatement( | |
|
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|
1654 STATEMENT_FROM_HERE, manager, |
| 0 | 1655 "SELECT COUNT(*) FROM Resources")); |
| 1656 break; | |
| 1657 | |
| 1658 default: | |
| 1659 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 1660 } | |
| 1661 | |
| 1662 statement->SetReadOnly(true); | |
| 1663 statement->Execute(); | |
| 1664 | |
| 1665 return static_cast<uint64_t>(ReadInteger64(*statement, 0)); | |
| 1666 } | |
| 1667 | |
| 1668 | |
| 1669 // For unit testing only! | |
|
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|
1670 uint64_t IndexBackend::GetUnprotectedPatientsCount(DatabaseManager& manager) |
| 0 | 1671 { |
|
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|
1672 std::unique_ptr<DatabaseManager::CachedStatement> statement; |
| 0 | 1673 |
|
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|
1674 switch (manager.GetDialect()) |
| 0 | 1675 { |
| 1676 case Dialect_MySQL: | |
| 1677 statement.reset(new DatabaseManager::CachedStatement( | |
|
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|
1678 STATEMENT_FROM_HERE, manager, |
| 0 | 1679 "SELECT CAST(COUNT(*) AS UNSIGNED INT) FROM PatientRecyclingOrder")); |
| 1680 break; | |
| 1681 | |
| 1682 case Dialect_PostgreSQL: | |
| 1683 statement.reset(new DatabaseManager::CachedStatement( | |
|
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|
1684 STATEMENT_FROM_HERE, manager, |
| 0 | 1685 "SELECT CAST(COUNT(*) AS BIGINT) FROM PatientRecyclingOrder")); |
| 1686 break; | |
| 1687 | |
| 1688 case Dialect_SQLite: | |
| 1689 statement.reset(new DatabaseManager::CachedStatement( | |
|
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|
1690 STATEMENT_FROM_HERE, manager, |
| 0 | 1691 "SELECT COUNT(*) FROM PatientRecyclingOrder")); |
| 1692 break; | |
| 1693 | |
| 1694 default: | |
| 1695 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); | |
| 1696 } | |
| 1697 | |
| 1698 statement->SetReadOnly(true); | |
| 1699 statement->Execute(); | |
| 1700 | |
| 1701 return static_cast<uint64_t>(ReadInteger64(*statement, 0)); | |
| 1702 } | |
| 1703 | |
| 1704 | |
| 1705 // For unit testing only! | |
| 1706 bool IndexBackend::GetParentPublicId(std::string& target, | |
|
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|
1707 DatabaseManager& manager, |
| 0 | 1708 int64_t id) |
| 1709 { | |
| 1710 DatabaseManager::CachedStatement statement( | |
|
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|
1711 STATEMENT_FROM_HERE, manager, |
| 0 | 1712 "SELECT a.publicId FROM Resources AS a, Resources AS b " |
| 1713 "WHERE a.internalId = b.parentId AND b.internalId = ${id}"); | |
| 1714 | |
| 1715 statement.SetReadOnly(true); | |
| 1716 statement.SetParameterType("id", ValueType_Integer64); | |
| 1717 | |
| 1718 Dictionary args; | |
| 1719 args.SetIntegerValue("id", id); | |
| 1720 | |
| 1721 statement.Execute(args); | |
| 1722 | |
| 1723 if (statement.IsDone()) | |
| 1724 { | |
| 1725 return false; | |
| 1726 } | |
| 1727 else | |
| 1728 { | |
| 1729 target = ReadString(statement, 0); | |
| 1730 return true; | |
| 1731 } | |
| 1732 } | |
| 1733 | |
| 1734 | |
| 1735 // For unit tests only! | |
| 1736 void IndexBackend::GetChildren(std::list<std::string>& childrenPublicIds, | |
|
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|
1737 DatabaseManager& manager, |
| 0 | 1738 int64_t id) |
| 1739 { | |
| 1740 DatabaseManager::CachedStatement statement( | |
|
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|
1741 STATEMENT_FROM_HERE, manager, |
| 0 | 1742 "SELECT publicId FROM Resources WHERE parentId=${id}"); |
| 1743 | |
| 1744 statement.SetReadOnly(true); | |
| 1745 statement.SetParameterType("id", ValueType_Integer64); | |
| 1746 | |
| 1747 Dictionary args; | |
| 1748 args.SetIntegerValue("id", id); | |
| 1749 | |
| 1750 ReadListOfStrings(childrenPublicIds, statement, args); | |
| 1751 } | |
|
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|
1752 |
|
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|
1753 |
| 78 | 1754 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1 |
|
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|
1755 class IndexBackend::LookupFormatter : public Orthanc::ISqlLookupFormatter |
|
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|
1756 { |
|
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|
1757 private: |
|
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|
1758 Dialect dialect_; |
|
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|
1759 size_t count_; |
|
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|
1760 Dictionary dictionary_; |
|
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|
1761 |
|
70
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|
1762 static std::string FormatParameter(size_t index) |
|
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|
1763 { |
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|
1764 return "p" + boost::lexical_cast<std::string>(index); |
|
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|
1765 } |
|
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|
1766 |
|
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|
1767 public: |
|
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|
1768 LookupFormatter(Dialect dialect) : |
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|
1769 dialect_(dialect), |
|
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|
1770 count_(0) |
|
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|
1771 { |
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|
1772 } |
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|
1773 |
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|
1774 virtual std::string GenerateParameter(const std::string& value) |
|
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|
1775 { |
|
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|
1776 const std::string key = FormatParameter(count_); |
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|
1777 |
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|
1778 count_ ++; |
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|
1779 dictionary_.SetUtf8Value(key, value); |
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|
1780 |
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|
1781 return "${" + key + "}"; |
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|
1782 } |
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|
1783 |
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|
1784 virtual std::string FormatResourceType(Orthanc::ResourceType level) |
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|
1785 { |
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|
1786 return boost::lexical_cast<std::string>(Orthanc::Plugins::Convert(level)); |
|
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|
1787 } |
|
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|
1788 |
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|
1789 virtual std::string FormatWildcardEscape() |
|
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|
1790 { |
|
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|
1791 switch (dialect_) |
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1792 { |
|
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|
1793 case Dialect_SQLite: |
|
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1794 case Dialect_PostgreSQL: |
|
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|
1795 return "ESCAPE '\\'"; |
|
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1796 |
|
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|
1797 case Dialect_MySQL: |
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|
1798 return "ESCAPE '\\\\'"; |
|
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1799 |
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|
1800 default: |
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1801 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); |
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1802 } |
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1803 } |
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1804 |
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1805 void PrepareStatement(DatabaseManager::StandaloneStatement& statement) const |
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1806 { |
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1807 statement.SetReadOnly(true); |
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1808 |
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1809 for (size_t i = 0; i < count_; i++) |
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1810 { |
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1811 statement.SetParameterType(FormatParameter(i), ValueType_Utf8String); |
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1812 } |
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1813 } |
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1814 |
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1815 const Dictionary& GetDictionary() const |
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1816 { |
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1817 return dictionary_; |
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1818 } |
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1819 }; |
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1820 #endif |
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1821 |
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1822 |
| 78 | 1823 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1 |
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1824 // New primitive since Orthanc 1.5.2 |
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1825 void IndexBackend::LookupResources(IDatabaseBackendOutput& output, |
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1826 DatabaseManager& manager, |
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1827 const std::vector<Orthanc::DatabaseConstraint>& lookup, |
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1828 OrthancPluginResourceType queryLevel, |
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1829 uint32_t limit, |
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1830 bool requestSomeInstance) |
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1831 { |
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1832 LookupFormatter formatter(manager.GetDialect()); |
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1833 |
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1834 std::string sql; |
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1835 Orthanc::ISqlLookupFormatter::Apply(sql, formatter, lookup, |
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1836 Orthanc::Plugins::Convert(queryLevel), limit); |
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1837 |
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1838 if (requestSomeInstance) |
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1839 { |
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1840 // Composite query to find some instance if requested |
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1841 switch (queryLevel) |
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1842 { |
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1843 case OrthancPluginResourceType_Patient: |
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1844 sql = ("SELECT patients.publicId, MIN(instances.publicId) FROM (" + sql + ") patients " |
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1845 "INNER JOIN Resources studies ON studies.parentId = patients.internalId " |
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1846 "INNER JOIN Resources series ON series.parentId = studies.internalId " |
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1847 "INNER JOIN Resources instances ON instances.parentId = series.internalId " |
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1848 "GROUP BY patients.publicId"); |
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1849 break; |
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1850 |
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1851 case OrthancPluginResourceType_Study: |
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1852 sql = ("SELECT studies.publicId, MIN(instances.publicId) FROM (" + sql + ") studies " |
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1853 "INNER JOIN Resources series ON series.parentId = studies.internalId " |
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1854 "INNER JOIN Resources instances ON instances.parentId = series.internalId " |
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1855 "GROUP BY studies.publicId"); |
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1856 break; |
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1857 |
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1858 case OrthancPluginResourceType_Series: |
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1859 sql = ("SELECT series.publicId, MIN(instances.publicId) FROM (" + sql + ") series " |
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1860 "INNER JOIN Resources instances ON instances.parentId = series.internalId " |
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1861 "GROUP BY series.publicId"); |
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1862 break; |
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1863 |
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1864 case OrthancPluginResourceType_Instance: |
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1865 sql = ("SELECT instances.publicId, instances.publicId FROM (" + sql + ") instances"); |
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1866 break; |
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1867 |
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1868 default: |
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1869 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); |
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1870 } |
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1871 } |
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1872 |
|
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1873 DatabaseManager::StandaloneStatement statement(manager, sql); |
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1874 formatter.PrepareStatement(statement); |
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1875 |
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1876 statement.Execute(formatter.GetDictionary()); |
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1877 |
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1878 while (!statement.IsDone()) |
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1879 { |
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1880 if (requestSomeInstance) |
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1881 { |
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1882 output.AnswerMatchingResource(ReadString(statement, 0), ReadString(statement, 1)); |
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1883 } |
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1884 else |
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1885 { |
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1886 output.AnswerMatchingResource(ReadString(statement, 0)); |
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1887 } |
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1888 |
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1889 statement.Next(); |
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1890 } |
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1891 } |
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1892 #endif |
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1893 |
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1894 |
| 78 | 1895 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1 |
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1896 static void ExecuteSetResourcesContentTags( |
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1897 DatabaseManager& manager, |
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1898 const std::string& table, |
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1899 const std::string& variablePrefix, |
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1900 uint32_t count, |
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1901 const OrthancPluginResourcesContentTags* tags) |
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1902 { |
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1903 std::string sql; |
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1904 Dictionary args; |
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1905 |
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1906 for (uint32_t i = 0; i < count; i++) |
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1907 { |
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1908 std::string name = variablePrefix + boost::lexical_cast<std::string>(i); |
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1909 |
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1910 args.SetUtf8Value(name, tags[i].value); |
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1911 |
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1912 std::string insert = ("(" + boost::lexical_cast<std::string>(tags[i].resource) + ", " + |
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1913 boost::lexical_cast<std::string>(tags[i].group) + ", " + |
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1914 boost::lexical_cast<std::string>(tags[i].element) + ", " + |
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1915 "${" + name + "})"); |
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1916 |
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1917 if (sql.empty()) |
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1918 { |
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1919 sql = "INSERT INTO " + table + " VALUES " + insert; |
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1920 } |
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1921 else |
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1922 { |
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1923 sql += ", " + insert; |
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1924 } |
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1925 } |
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1926 |
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1927 if (!sql.empty()) |
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1928 { |
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1929 DatabaseManager::StandaloneStatement statement(manager, sql); |
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1930 |
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1931 for (uint32_t i = 0; i < count; i++) |
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1932 { |
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1933 statement.SetParameterType(variablePrefix + boost::lexical_cast<std::string>(i), |
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1934 ValueType_Utf8String); |
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1935 } |
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1936 |
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1937 statement.Execute(args); |
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1938 } |
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1939 } |
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1940 #endif |
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1941 |
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1942 |
| 78 | 1943 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1 |
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1944 static void ExecuteSetResourcesContentMetadata( |
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1945 DatabaseManager& manager, |
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1946 uint32_t count, |
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1947 const OrthancPluginResourcesContentMetadata* metadata) |
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1948 { |
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1949 std::string sqlRemove; // To overwrite |
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1950 std::string sqlInsert; |
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1951 Dictionary args; |
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1952 |
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1953 for (uint32_t i = 0; i < count; i++) |
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1954 { |
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1955 std::string name = "m" + boost::lexical_cast<std::string>(i); |
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1956 |
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1957 args.SetUtf8Value(name, metadata[i].value); |
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1958 |
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1959 std::string insert = ("(" + boost::lexical_cast<std::string>(metadata[i].resource) + ", " + |
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1960 boost::lexical_cast<std::string>(metadata[i].metadata) + ", " + |
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1961 "${" + name + "})"); |
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1962 |
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1963 std::string remove = ("(id=" + boost::lexical_cast<std::string>(metadata[i].resource) + |
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1964 " AND type=" + boost::lexical_cast<std::string>(metadata[i].metadata) |
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1965 + ")"); |
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1966 |
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1967 if (sqlInsert.empty()) |
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1968 { |
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1969 sqlInsert = "INSERT INTO Metadata VALUES " + insert; |
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1970 } |
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1971 else |
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1972 { |
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1973 sqlInsert += ", " + insert; |
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1974 } |
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1975 |
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1976 if (sqlRemove.empty()) |
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1977 { |
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1978 sqlRemove = "DELETE FROM Metadata WHERE " + remove; |
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1979 } |
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1980 else |
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1981 { |
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1982 sqlRemove += " OR " + remove; |
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1983 } |
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1984 } |
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1985 |
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1986 if (!sqlRemove.empty()) |
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1987 { |
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1988 DatabaseManager::StandaloneStatement statement(manager, sqlRemove); |
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1989 statement.Execute(); |
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1990 } |
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1991 |
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1992 if (!sqlInsert.empty()) |
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1993 { |
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1994 DatabaseManager::StandaloneStatement statement(manager, sqlInsert); |
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1995 |
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1996 for (uint32_t i = 0; i < count; i++) |
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1997 { |
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1998 statement.SetParameterType("m" + boost::lexical_cast<std::string>(i), |
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1999 ValueType_Utf8String); |
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2000 } |
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2001 |
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2002 statement.Execute(args); |
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2003 } |
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2004 } |
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2005 #endif |
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2006 |
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2007 |
| 78 | 2008 #if ORTHANC_PLUGINS_HAS_DATABASE_CONSTRAINT == 1 |
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2009 // New primitive since Orthanc 1.5.2 |
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2010 void IndexBackend::SetResourcesContent( |
|
225
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2011 DatabaseManager& manager, |
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2012 uint32_t countIdentifierTags, |
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2013 const OrthancPluginResourcesContentTags* identifierTags, |
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2014 uint32_t countMainDicomTags, |
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2015 const OrthancPluginResourcesContentTags* mainDicomTags, |
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2016 uint32_t countMetadata, |
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2017 const OrthancPluginResourcesContentMetadata* metadata) |
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2018 { |
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2019 /** |
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2020 * TODO - PostgreSQL doesn't allow multiple commands in a prepared |
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2021 * statement, so we execute 3 separate commands (for identifiers, |
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2022 * main tags and metadata). Maybe MySQL does not suffer from the |
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2023 * same limitation, to check. |
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2024 **/ |
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2025 |
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2026 ExecuteSetResourcesContentTags(manager, "DicomIdentifiers", "i", |
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|
2027 countIdentifierTags, identifierTags); |
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2028 |
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2029 ExecuteSetResourcesContentTags(manager, "MainDicomTags", "t", |
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|
2030 countMainDicomTags, mainDicomTags); |
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2031 |
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2032 ExecuteSetResourcesContentMetadata(manager, countMetadata, metadata); |
|
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2033 } |
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2034 #endif |
|
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2035 |
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|
2036 |
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|
2037 // New primitive since Orthanc 1.5.2 |
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|
2038 void IndexBackend::GetChildrenMetadata(std::list<std::string>& target, |
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2039 DatabaseManager& manager, |
|
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|
2040 int64_t resourceId, |
|
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|
2041 int32_t metadata) |
|
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|
2042 { |
|
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2043 DatabaseManager::CachedStatement statement( |
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2044 STATEMENT_FROM_HERE, manager, |
|
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|
2045 "SELECT value FROM Metadata WHERE type=${metadata} AND " |
|
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|
2046 "id IN (SELECT internalId FROM Resources WHERE parentId=${id})"); |
|
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|
2047 |
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|
2048 statement.SetReadOnly(true); |
|
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|
2049 statement.SetParameterType("id", ValueType_Integer64); |
|
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|
2050 statement.SetParameterType("metadata", ValueType_Integer64); |
|
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|
2051 |
|
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diff
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|
2052 Dictionary args; |
|
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diff
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|
2053 args.SetIntegerValue("id", static_cast<int>(resourceId)); |
|
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|
2054 args.SetIntegerValue("metadata", static_cast<int>(metadata)); |
|
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|
2055 |
|
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|
2056 ReadListOfStrings(target, statement, args); |
|
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|
2057 } |
|
88
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2058 |
|
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|
2059 |
|
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|
2060 // New primitive since Orthanc 1.5.2 |
|
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|
2061 void IndexBackend::TagMostRecentPatient(DatabaseManager& manager, |
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|
2062 int64_t patient) |
|
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|
2063 { |
|
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|
2064 int64_t seq; |
|
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|
2065 |
|
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diff
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|
2066 { |
|
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|
2067 DatabaseManager::CachedStatement statement( |
|
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|
2068 STATEMENT_FROM_HERE, manager, |
|
88
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|
2069 "SELECT * FROM PatientRecyclingOrder WHERE seq >= " |
|
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|
2070 "(SELECT seq FROM PatientRecyclingOrder WHERE patientid=${id}) ORDER BY seq LIMIT 2"); |
|
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|
2071 |
|
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|
2072 statement.SetReadOnly(true); |
|
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|
2073 statement.SetParameterType("id", ValueType_Integer64); |
|
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|
2074 |
|
eb08ec14fb04
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diff
changeset
|
2075 Dictionary args; |
|
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|
2076 args.SetIntegerValue("id", patient); |
|
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|
2077 |
|
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diff
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|
2078 statement.Execute(args); |
|
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|
2079 |
|
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|
2080 if (statement.IsDone()) |
|
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|
2081 { |
|
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|
2082 // The patient is protected, don't add it to the recycling order |
|
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|
2083 return; |
|
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diff
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|
2084 } |
|
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diff
changeset
|
2085 |
|
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diff
changeset
|
2086 seq = ReadInteger64(statement, 0); |
|
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|
2087 |
|
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diff
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|
2088 statement.Next(); |
|
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|
2089 |
|
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diff
changeset
|
2090 if (statement.IsDone()) |
|
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|
2091 { |
|
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|
2092 // The patient is already at the end of the recycling order |
|
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|
2093 // (because of the "LIMIT 2" above), no need to modify the table |
|
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|
2094 return; |
|
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diff
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|
2095 } |
|
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diff
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|
2096 } |
|
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changeset
|
2097 |
|
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changeset
|
2098 // Delete the old position of the patient in the recycling order |
|
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|
2099 |
|
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|
2100 { |
|
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|
2101 DatabaseManager::CachedStatement statement( |
|
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|
2102 STATEMENT_FROM_HERE, manager, |
|
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|
2103 "DELETE FROM PatientRecyclingOrder WHERE seq=${seq}"); |
|
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|
2104 |
|
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changeset
|
2105 statement.SetParameterType("seq", ValueType_Integer64); |
|
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|
2106 |
|
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diff
changeset
|
2107 Dictionary args; |
|
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|
2108 args.SetIntegerValue("seq", seq); |
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|
2109 |
|
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|
2110 statement.Execute(args); |
|
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|
2111 } |
|
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|
2112 |
|
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diff
changeset
|
2113 // Add the patient to the end of the recycling order |
|
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|
2114 |
|
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diff
changeset
|
2115 { |
|
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|
2116 DatabaseManager::CachedStatement statement( |
|
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|
2117 STATEMENT_FROM_HERE, manager, |
|
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|
2118 "INSERT INTO PatientRecyclingOrder VALUES(${}, ${id})"); |
|
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|
2119 |
|
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changeset
|
2120 statement.SetParameterType("id", ValueType_Integer64); |
|
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|
2121 |
|
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changeset
|
2122 Dictionary args; |
|
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|
2123 args.SetIntegerValue("id", patient); |
|
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|
2124 |
|
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changeset
|
2125 statement.Execute(args); |
|
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|
2126 } |
|
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|
2127 } |
|
117
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|
2128 |
|
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|
2129 |
|
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Implementation of new extensions: LookupResourceAndParent and GetAllMetadata
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changeset
|
2130 #if defined(ORTHANC_PLUGINS_VERSION_IS_ABOVE) // Macro introduced in 1.3.1 |
|
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|
2131 # if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 5, 4) |
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2132 // New primitive since Orthanc 1.5.4 |
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2133 bool IndexBackend::LookupResourceAndParent(int64_t& id, |
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2134 OrthancPluginResourceType& type, |
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2135 std::string& parentPublicId, |
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2136 DatabaseManager& manager, |
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2137 const char* publicId) |
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2138 { |
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2139 DatabaseManager::CachedStatement statement( |
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2140 STATEMENT_FROM_HERE, manager, |
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2141 "SELECT resource.internalId, resource.resourceType, parent.publicId " |
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2142 "FROM Resources AS resource LEFT JOIN Resources parent ON parent.internalId=resource.parentId " |
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2143 "WHERE resource.publicId=${id}"); |
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2144 |
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2145 statement.SetParameterType("id", ValueType_Utf8String); |
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2146 |
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2147 Dictionary args; |
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2148 args.SetUtf8Value("id", publicId); |
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2149 |
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2150 statement.Execute(args); |
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2151 |
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2152 if (statement.IsDone()) |
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2153 { |
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2154 return false; |
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2155 } |
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2156 else |
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2157 { |
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2158 if (statement.GetResultFieldsCount() != 3) |
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2159 { |
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2160 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); |
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2161 } |
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2162 |
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2163 statement.SetResultFieldType(0, ValueType_Integer64); |
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2164 statement.SetResultFieldType(1, ValueType_Integer64); |
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2165 statement.SetResultFieldType(2, ValueType_Utf8String); |
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2166 |
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2167 id = ReadInteger64(statement, 0); |
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2168 type = static_cast<OrthancPluginResourceType>(ReadInteger32(statement, 1)); |
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2169 |
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2170 const IValue& value = statement.GetResultField(2); |
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2171 |
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2172 switch (value.GetType()) |
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2173 { |
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2174 case ValueType_Null: |
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2175 parentPublicId.clear(); |
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2176 break; |
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2177 |
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2178 case ValueType_Utf8String: |
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2179 parentPublicId = dynamic_cast<const Utf8StringValue&>(value).GetContent(); |
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2180 break; |
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2181 |
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2182 default: |
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2183 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); |
|
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2184 } |
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2185 |
|
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2186 assert((statement.Next(), statement.IsDone())); |
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2187 return true; |
|
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2188 } |
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2189 } |
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2190 # endif |
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2191 #endif |
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2192 |
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|
2193 |
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2194 #if defined(ORTHANC_PLUGINS_VERSION_IS_ABOVE) // Macro introduced in 1.3.1 |
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|
2195 # if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 5, 4) |
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2196 // New primitive since Orthanc 1.5.4 |
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2197 void IndexBackend::GetAllMetadata(std::map<int32_t, std::string>& result, |
|
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2198 DatabaseManager& manager, |
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2199 int64_t id) |
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2200 { |
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2201 DatabaseManager::CachedStatement statement( |
|
225
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2202 STATEMENT_FROM_HERE, manager, |
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2203 "SELECT type, value FROM Metadata WHERE id=${id}"); |
|
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2204 |
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2205 statement.SetReadOnly(true); |
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2206 statement.SetParameterType("id", ValueType_Integer64); |
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2207 |
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2208 Dictionary args; |
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2209 args.SetIntegerValue("id", id); |
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2210 |
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2211 statement.Execute(args); |
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2212 |
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2213 result.clear(); |
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2214 |
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2215 if (!statement.IsDone()) |
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2216 { |
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2217 if (statement.GetResultFieldsCount() != 2) |
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2218 { |
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2219 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); |
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2220 } |
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2221 |
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2222 statement.SetResultFieldType(0, ValueType_Integer64); |
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2223 statement.SetResultFieldType(1, ValueType_Utf8String); |
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2224 |
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2225 while (!statement.IsDone()) |
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2226 { |
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2227 result[ReadInteger32(statement, 0)] = ReadString(statement, 1); |
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2228 statement.Next(); |
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2229 } |
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2230 } |
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2231 } |
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2232 # endif |
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2233 #endif |
|
210
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|
2234 |
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2235 |
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|
2236 void IndexBackend::CreateInstanceGeneric(OrthancPluginCreateInstanceResult& result, |
|
225
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2237 DatabaseManager& manager, |
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2238 const char* hashPatient, |
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2239 const char* hashStudy, |
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2240 const char* hashSeries, |
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|
2241 const char* hashInstance) |
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2242 { |
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2243 // Check out "OrthancServer/Sources/Database/Compatibility/ICreateInstance.cpp" |
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2244 |
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2245 { |
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2246 OrthancPluginResourceType type; |
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|
2247 int64_t tmp; |
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2248 |
|
225
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2249 if (LookupResource(tmp, type, manager, hashInstance)) |
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2250 { |
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|
2251 // The instance already exists |
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2252 assert(type == OrthancPluginResourceType_Instance); |
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2253 result.instanceId = tmp; |
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2254 result.isNewInstance = false; |
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|
2255 return; |
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2256 } |
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|
2257 } |
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|
2258 |
|
225
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|
2259 result.instanceId = CreateResource(manager, hashInstance, OrthancPluginResourceType_Instance); |
|
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|
2260 result.isNewInstance = true; |
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|
2261 |
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|
2262 result.isNewPatient = false; |
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|
2263 result.isNewStudy = false; |
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|
2264 result.isNewSeries = false; |
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|
2265 result.patientId = -1; |
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|
2266 result.studyId = -1; |
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|
2267 result.seriesId = -1; |
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|
2268 |
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|
2269 // Detect up to which level the patient/study/series/instance |
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|
2270 // hierarchy must be created |
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|
2271 |
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|
2272 { |
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|
2273 OrthancPluginResourceType dummy; |
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|
2274 |
|
225
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|
2275 if (LookupResource(result.seriesId, dummy, manager, hashSeries)) |
|
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|
2276 { |
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|
2277 assert(dummy == OrthancPluginResourceType_Series); |
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2278 // The patient, the study and the series already exist |
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|
2279 |
|
225
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2280 bool ok = (LookupResource(result.patientId, dummy, manager, hashPatient) && |
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2281 LookupResource(result.studyId, dummy, manager, hashStudy)); |
|
210
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|
2282 (void) ok; // Remove warning about unused variable in release builds |
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|
2283 assert(ok); |
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2284 } |
|
225
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|
2285 else if (LookupResource(result.studyId, dummy, manager, hashStudy)) |
|
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|
2286 { |
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|
2287 assert(dummy == OrthancPluginResourceType_Study); |
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|
2288 |
|
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2289 // New series: The patient and the study already exist |
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2290 result.isNewSeries = true; |
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|
2291 |
|
225
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|
2292 bool ok = LookupResource(result.patientId, dummy, manager, hashPatient); |
|
210
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|
2293 (void) ok; // Remove warning about unused variable in release builds |
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|
2294 assert(ok); |
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2295 } |
|
225
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2296 else if (LookupResource(result.patientId, dummy, manager, hashPatient)) |
|
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|
2297 { |
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|
2298 assert(dummy == OrthancPluginResourceType_Patient); |
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|
2299 |
|
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2300 // New study and series: The patient already exist |
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|
2301 result.isNewStudy = true; |
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2302 result.isNewSeries = true; |
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2303 } |
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2304 else |
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|
2305 { |
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2306 // New patient, study and series: Nothing exists |
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|
2307 result.isNewPatient = true; |
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|
2308 result.isNewStudy = true; |
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|
2309 result.isNewSeries = true; |
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2310 } |
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2311 } |
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2312 |
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|
2313 // Create the series if needed |
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|
2314 if (result.isNewSeries) |
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2315 { |
|
225
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2316 result.seriesId = CreateResource(manager, hashSeries, OrthancPluginResourceType_Series); |
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2317 } |
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2318 |
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2319 // Create the study if needed |
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2320 if (result.isNewStudy) |
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2321 { |
|
225
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2322 result.studyId = CreateResource(manager, hashStudy, OrthancPluginResourceType_Study); |
|
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2323 } |
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2324 |
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|
2325 // Create the patient if needed |
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2326 if (result.isNewPatient) |
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2327 { |
|
225
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2328 result.patientId = CreateResource(manager, hashPatient, OrthancPluginResourceType_Patient); |
|
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2329 } |
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2330 |
|
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2331 // Create the parent-to-child links |
|
225
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2332 AttachChild(manager, result.seriesId, result.instanceId); |
|
210
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|
2333 |
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2334 if (result.isNewSeries) |
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2335 { |
|
225
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2336 AttachChild(manager, result.studyId, result.seriesId); |
|
210
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2337 } |
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|
2338 |
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|
2339 if (result.isNewStudy) |
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|
2340 { |
|
225
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|
2341 AttachChild(manager, result.patientId, result.studyId); |
|
210
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2342 } |
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2343 |
|
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2344 TagMostRecentPatient(manager, result.patientId); |
|
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2345 |
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2346 // Sanity checks |
|
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|
2347 assert(result.patientId != -1); |
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|
2348 assert(result.studyId != -1); |
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2349 assert(result.seriesId != -1); |
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2350 assert(result.instanceId != -1); |
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2351 } |
|
213
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2352 |
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2353 |
|
234
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2354 void IndexBackend::Register(IndexBackend* backend, |
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2355 size_t countConnections, |
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2356 unsigned int maxDatabaseRetries) |
|
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2357 { |
|
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2358 if (backend == NULL) |
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2359 { |
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2360 throw Orthanc::OrthancException(Orthanc::ErrorCode_NullPointer); |
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2361 } |
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2362 |
|
213
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2363 bool hasLoadedV3 = false; |
|
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2364 |
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2365 #if defined(ORTHANC_PLUGINS_VERSION_IS_ABOVE) // Macro introduced in Orthanc 1.3.1 |
|
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2366 # if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 9, 2) |
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2367 if (OrthancPluginCheckVersionAdvanced(backend->GetContext(), 1, 9, 2) == 1) |
|
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2368 { |
|
234
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2369 OrthancDatabases::DatabaseBackendAdapterV3::Register(backend, countConnections, maxDatabaseRetries); |
|
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2370 hasLoadedV3 = true; |
|
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2371 } |
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2372 # endif |
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2373 #endif |
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2374 |
|
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2375 if (!hasLoadedV3) |
|
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2376 { |
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2377 LOG(WARNING) << "Performance warning: Your version of Orthanc doesn't support multiple readers/writers"; |
|
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2378 OrthancDatabases::DatabaseBackendAdapterV2::Register(backend); |
|
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2379 } |
|
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2380 } |
|
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2381 |
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2382 |
|
237
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|
2383 bool IndexBackend::LookupGlobalIntegerProperty(int& target, |
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|
2384 DatabaseManager& manager, |
|
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|
2385 const char* serverIdentifier, |
|
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|
2386 int32_t property) |
|
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|
2387 { |
|
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|
2388 std::string value; |
|
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|
2389 |
|
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|
2390 if (LookupGlobalProperty(value, manager, serverIdentifier, property)) |
|
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2391 { |
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2392 try |
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|
2393 { |
|
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|
2394 target = boost::lexical_cast<int>(value); |
|
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|
2395 return true; |
|
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|
2396 } |
|
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|
2397 catch (boost::bad_lexical_cast&) |
|
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|
2398 { |
|
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|
2399 LOG(ERROR) << "Corrupted PostgreSQL database"; |
|
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2400 throw Orthanc::OrthancException(Orthanc::ErrorCode_Database); |
|
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|
2401 } |
|
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2402 } |
|
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|
2403 else |
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|
2404 { |
|
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|
2405 return false; |
|
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|
2406 } |
|
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|
2407 } |
|
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|
2408 |
|
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|
2409 |
|
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|
2410 void IndexBackend::SetGlobalIntegerProperty(DatabaseManager& manager, |
|
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2411 const char* serverIdentifier, |
|
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2412 int32_t property, |
|
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|
2413 int value) |
|
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|
2414 { |
|
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2415 std::string s = boost::lexical_cast<std::string>(value); |
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2416 SetGlobalProperty(manager, serverIdentifier, property, s.c_str()); |
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2417 } |
|
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|
2418 |
|
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|
2419 |
|
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|
2420 void IndexBackend::Finalize() |
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2421 { |
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|
2422 OrthancDatabases::DatabaseBackendAdapterV2::Finalize(); |
|
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2423 |
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|
2424 #if defined(ORTHANC_PLUGINS_VERSION_IS_ABOVE) // Macro introduced in Orthanc 1.3.1 |
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|
2425 # if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 9, 2) |
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|
2426 OrthancDatabases::DatabaseBackendAdapterV3::Finalize(); |
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2427 # endif |
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2428 #endif |
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2429 } |
|
226
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2430 |
|
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2431 |
|
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|
2432 DatabaseManager* IndexBackend::CreateSingleDatabaseManager(IDatabaseBackend& backend) |
|
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2433 { |
|
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|
2434 std::unique_ptr<DatabaseManager> manager(new DatabaseManager(backend.OpenDatabaseConnection())); |
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2435 backend.ConfigureDatabase(*manager); |
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2436 return manager.release(); |
|
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2437 } |
| 0 | 2438 } |