annotate OrthancServer/Sources/OrthancRestApi/OrthancRestAnonymizeModify.cpp @ 4699:facea16b055b

added the "Level" argument to "/tools/bulk-content"
author Sebastien Jodogne <s.jodogne@gmail.com>
date Fri, 18 Jun 2021 17:58:56 +0200
parents da1edb7d6332
children f0038043fb97 bad8935cd5f2
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2 * Orthanc - A Lightweight, RESTful DICOM Store
1900
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288
6e7e5ed91c2d upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1279
diff changeset
4 * Department, University Hospital of Liege, Belgium
4437
d9473bd5ed43 upgrade to year 2021
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4435
diff changeset
5 * Copyright (C) 2017-2021 Osimis S.A., Belgium
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
6 *
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 * This program is free software: you can redistribute it and/or
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
8 * modify it under the terms of the GNU General Public License as
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 * published by the Free Software Foundation, either version 3 of the
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 * License, or (at your option) any later version.
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
11 *
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
12 * In addition, as a special exception, the copyright holders of this
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 * program give permission to link the code of its release with the
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
15 * that use the same license as the "OpenSSL" library), and distribute
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
16 * the linked executables. You must obey the GNU General Public License
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
17 * in all respects for all of the code used other than "OpenSSL". If you
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
18 * modify file(s) with this exception, you may extend this exception to
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
19 * your version of the file(s), but you are not obligated to do so. If
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
20 * you do not wish to do so, delete this exception statement from your
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21 * version. If you delete this exception statement from all source files
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22 * in the program, then also delete it here.
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23 *
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24 * This program is distributed in the hope that it will be useful, but
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25 * WITHOUT ANY WARRANTY; without even the implied warranty of
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
27 * General Public License for more details.
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 *
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29 * You should have received a copy of the GNU General Public License
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31 **/
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
33
831
84513f2ee1f3 pch for unit tests and server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 824
diff changeset
34 #include "../PrecompiledHeadersServer.h"
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35 #include "OrthancRestApi.h"
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36
4045
05b8fd21089c fix path
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
37 #include "../../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h"
05b8fd21089c fix path
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
38 #include "../../../OrthancFramework/Sources/Logging.h"
05b8fd21089c fix path
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
39 #include "../../../OrthancFramework/Sources/SerializationToolbox.h"
3709
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
40 #include "../OrthancConfiguration.h"
1437
02f5a3f5c0a0 access to the REST API from Lua
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
41 #include "../ServerContext.h"
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
42 #include "../ServerJobs/MergeStudyJob.h"
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
43 #include "../ServerJobs/ResourceModificationJob.h"
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
44 #include "../ServerJobs/SplitStudyJob.h"
787
ac18946afa74 refactoring of anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 782
diff changeset
45
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
46 #include <boost/lexical_cast.hpp>
1641
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
47 #include <boost/algorithm/string/predicate.hpp>
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
48
4687
fcd2dc7c8f31 "Replace", "Keep" and "Remove" in "/modify" and "/anonymize" accept paths to subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
49 #define INFO_SUBSEQUENCES \
fcd2dc7c8f31 "Replace", "Keep" and "Remove" in "/modify" and "/anonymize" accept paths to subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
50 "Starting with Orthanc 1.9.4, paths to subsequences can be provided using the "\
fcd2dc7c8f31 "Replace", "Keep" and "Remove" in "/modify" and "/anonymize" accept paths to subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
51 "same syntax as the `dcmodify` command-line tool (wildcards are supported as well)."
fcd2dc7c8f31 "Replace", "Keep" and "Remove" in "/modify" and "/anonymize" accept paths to subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
52
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
53 namespace Orthanc
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
54 {
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
55 // Modification of DICOM instances ------------------------------------------
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
56
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2518
diff changeset
57
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
58 static std::string GeneratePatientName(ServerContext& context)
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
59 {
4607
f75c63aa9de0 differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
60 uint64_t seq = context.GetIndex().IncrementGlobalSequence(GlobalProperty_AnonymizationSequence, true /* shared */);
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
61 return "Anonymized" + boost::lexical_cast<std::string>(seq);
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
62 }
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
63
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
64
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
65 static void DocumentModifyOptions(RestApiPostCall& call)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
66 {
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
67 // Check out "DicomModification::ParseModifyRequest()"
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
68 call.GetDocumentation()
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
69 .SetRequestField("Transcode", RestApiCallDocumentation::Type_String,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
70 "Transcode the DICOM instances to the provided DICOM transfer syntax: "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
71 "https://book.orthanc-server.com/faq/transcoding.html", false)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
72 .SetRequestField("Force", RestApiCallDocumentation::Type_Boolean,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
73 "Allow the modification of tags related to DICOM identifiers, at the risk of "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
74 "breaking the DICOM model of the real world", false)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
75 .SetRequestField("RemovePrivateTags", RestApiCallDocumentation::Type_Boolean,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
76 "Remove the private tags from the DICOM instances (defaults to `false`)", false)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
77 .SetRequestField("Replace", RestApiCallDocumentation::Type_JsonObject,
4687
fcd2dc7c8f31 "Replace", "Keep" and "Remove" in "/modify" and "/anonymize" accept paths to subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
78 "Associative array to change the value of some DICOM tags in the DICOM instances. " INFO_SUBSEQUENCES, false)
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
79 .SetRequestField("Remove", RestApiCallDocumentation::Type_JsonListOfStrings,
4687
fcd2dc7c8f31 "Replace", "Keep" and "Remove" in "/modify" and "/anonymize" accept paths to subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
80 "List of tags that must be removed from the DICOM instances. " INFO_SUBSEQUENCES, false)
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
81 .SetRequestField("Keep", RestApiCallDocumentation::Type_JsonListOfStrings,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
82 "Keep the original value of the specified tags, to be chosen among the `StudyInstanceUID`, "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
83 "`SeriesInstanceUID` and `SOPInstanceUID` tags. Avoid this feature as much as possible, "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
84 "as this breaks the DICOM model of the real world.", false)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
85 .SetRequestField("PrivateCreator", RestApiCallDocumentation::Type_String,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
86 "The private creator to be used for private tags in `Replace`", false);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
87 }
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
88
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
89
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
90 static void DocumentAnonymizationOptions(RestApiPostCall& call)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
91 {
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
92 // Check out "DicomModification::ParseAnonymizationRequest()"
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
93 call.GetDocumentation()
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
94 .SetRequestField("Force", RestApiCallDocumentation::Type_Boolean,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
95 "Allow the modification of tags related to DICOM identifiers, at the risk of "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
96 "breaking the DICOM model of the real world", false)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
97 .SetRequestField("DicomVersion", RestApiCallDocumentation::Type_String,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
98 "Version of the DICOM standard to be used for anonymization. Check out "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
99 "configuration option `DeidentifyLogsDicomVersion` for possible values.", false)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
100 .SetRequestField("KeepPrivateTags", RestApiCallDocumentation::Type_Boolean,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
101 "Keep the private tags from the DICOM instances (defaults to `false`)", false)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
102 .SetRequestField("Replace", RestApiCallDocumentation::Type_JsonObject,
4687
fcd2dc7c8f31 "Replace", "Keep" and "Remove" in "/modify" and "/anonymize" accept paths to subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
103 "Associative array to change the value of some DICOM tags in the DICOM instances. " INFO_SUBSEQUENCES, false)
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
104 .SetRequestField("Remove", RestApiCallDocumentation::Type_JsonListOfStrings,
4687
fcd2dc7c8f31 "Replace", "Keep" and "Remove" in "/modify" and "/anonymize" accept paths to subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
105 "List of additional tags to be removed from the DICOM instances. " INFO_SUBSEQUENCES, false)
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
106 .SetRequestField("Keep", RestApiCallDocumentation::Type_JsonListOfStrings,
4687
fcd2dc7c8f31 "Replace", "Keep" and "Remove" in "/modify" and "/anonymize" accept paths to subsequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4607
diff changeset
107 "List of DICOM tags whose value must not be destroyed by the anonymization. " INFO_SUBSEQUENCES, false)
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
108 .SetRequestField("PrivateCreator", RestApiCallDocumentation::Type_String,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
109 "The private creator to be used for private tags in `Replace`", false);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
110 }
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
111
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
112
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
113 static void ParseModifyRequest(Json::Value& request,
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
114 DicomModification& target,
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
115 const RestApiPostCall& call)
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
116 {
2640
c691fcf66071 ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2639
diff changeset
117 // curl http://localhost:8042/series/95a6e2bf-9296e2cc-bf614e2f-22b391ee-16e010e0/modify -X POST -d '{"Replace":{"InstitutionName":"My own clinic"},"Priority":9}'
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
118
3709
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
119 {
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
120 OrthancConfiguration::ReaderLock lock;
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
121 target.SetPrivateCreator(lock.GetConfiguration().GetDefaultPrivateCreator());
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
122 }
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
123
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
124 if (call.ParseJsonRequest(request))
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
125 {
2519
2e6b7862ccf2 ParseAnonymizationRequest/ParseModifyRequest now in DicomModification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2518
diff changeset
126 target.ParseModifyRequest(request);
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
127 }
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
128 else
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
129 {
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
130 throw OrthancException(ErrorCode_BadFileFormat);
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2250
diff changeset
131 }
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
132 }
2309
4dc313b9a20a Argument "DicomVersion" in URIs "/{...}/{...}/anonymization"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2250
diff changeset
133
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
134
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
135 static void ParseAnonymizationRequest(Json::Value& request,
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
136 DicomModification& target,
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
137 RestApiPostCall& call)
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
138 {
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
139 // curl http://localhost:8042/instances/6e67da51-d119d6ae-c5667437-87b9a8a5-0f07c49f/anonymize -X POST -d '{"Replace":{"PatientName":"hello","0010-0020":"world"},"Keep":["StudyDescription", "SeriesDescription"],"KeepPrivateTags": true,"Remove":["Modality"]}' > Anonymized.dcm
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
140
3709
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
141 {
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
142 OrthancConfiguration::ReaderLock lock;
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
143 target.SetPrivateCreator(lock.GetConfiguration().GetDefaultPrivateCreator());
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
144 }
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
145
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
146 if (call.ParseJsonRequest(request) &&
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
147 request.isObject())
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
148 {
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
149 bool patientNameOverridden;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
150 target.ParseAnonymizationRequest(patientNameOverridden, request);
2518
63d2cc0fb40a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2517
diff changeset
151
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
152 if (!patientNameOverridden)
2518
63d2cc0fb40a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2517
diff changeset
153 {
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
154 // Override the random Patient's Name by one that is more
2518
63d2cc0fb40a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2517
diff changeset
155 // user-friendly (provided none was specified by the user)
63d2cc0fb40a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2517
diff changeset
156 target.Replace(DICOM_TAG_PATIENT_NAME, GeneratePatientName(OrthancRestApi::GetContext(call)), true);
63d2cc0fb40a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2517
diff changeset
157 }
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
158 }
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
159 else
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
160 {
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
161 throw OrthancException(ErrorCode_BadFileFormat);
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
162 }
787
ac18946afa74 refactoring of anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 782
diff changeset
163 }
ac18946afa74 refactoring of anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 782
diff changeset
164
ac18946afa74 refactoring of anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 782
diff changeset
165
ac18946afa74 refactoring of anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 782
diff changeset
166 static void AnonymizeOrModifyInstance(DicomModification& modification,
3901
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
167 RestApiPostCall& call,
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
168 bool transcode,
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
169 DicomTransferSyntax targetSyntax)
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
170 {
3901
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
171 ServerContext& context = OrthancRestApi::GetContext(call);
778
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 751
diff changeset
172 std::string id = call.GetUriComponent("id", "");
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
173
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3709
diff changeset
174 std::unique_ptr<ParsedDicomFile> modified;
778
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 751
diff changeset
175
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
176 {
3901
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
177 ServerContext::DicomCacheLocker locker(context, id);
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
178 modified.reset(locker.GetDicom().Clone(true));
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
179 }
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
180
787
ac18946afa74 refactoring of anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 782
diff changeset
181 modification.Apply(*modified);
3901
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
182
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
183 if (transcode)
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
184 {
3945
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
185 IDicomTranscoder::DicomImage source;
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
186 source.AcquireParsed(*modified); // "modified" is invalid below this point
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
187
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
188 IDicomTranscoder::DicomImage transcoded;
3903
d1273d7cc200 avoid unnecessary dicom serialization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3901
diff changeset
189
3945
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
190 std::set<DicomTransferSyntax> s;
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
191 s.insert(targetSyntax);
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
192
3951
5fe8c6d3212e removed useless information "hasSopInstanceUidChanged"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
193 if (context.Transcode(transcoded, source, s, true))
3901
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
194 {
3945
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
195 call.GetOutput().AnswerBuffer(transcoded.GetBufferData(),
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
196 transcoded.GetBufferSize(), MimeType_Dicom);
3901
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
197 }
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
198 else
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
199 {
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
200 throw OrthancException(ErrorCode_InternalError,
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
201 "Cannot transcode to transfer syntax: " +
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
202 std::string(GetTransferSyntaxUid(targetSyntax)));
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
203 }
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
204 }
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
205 else
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
206 {
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
207 modified->Answer(call.GetOutput());
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
208 }
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
209 }
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
210
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
211
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
212 static ResourceType DetectModifyLevel(const DicomModification& modification)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
213 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
214 if (modification.IsReplaced(DICOM_TAG_PATIENT_ID))
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
215 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
216 return ResourceType_Patient;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
217 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
218 else if (modification.IsReplaced(DICOM_TAG_STUDY_INSTANCE_UID))
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
219 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
220 return ResourceType_Study;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
221 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
222 else if (modification.IsReplaced(DICOM_TAG_SERIES_INSTANCE_UID))
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
223 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
224 return ResourceType_Series;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
225 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
226 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
227 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
228 return ResourceType_Instance;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
229 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
230 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
231
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
232
974
83622b0f544c refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
233 static void ModifyInstance(RestApiPostCall& call)
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
234 {
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
235 if (call.IsDocumentation())
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
236 {
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
237 DocumentModifyOptions(call);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
238 call.GetDocumentation()
4435
23ad1b9c7800 fix tag in openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4424
diff changeset
239 .SetTag("Instances")
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
240 .SetSummary("Modify instance")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
241 .SetDescription("Download a modified version of the DICOM instance whose Orthanc identifier is provided in the URL: "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
242 "https://book.orthanc-server.com/users/anonymization.html#modification-of-a-single-instance")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
243 .SetUriArgument("id", "Orthanc identifier of the instance of interest")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
244 .AddAnswerType(MimeType_Dicom, "The modified DICOM instance");
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
245 return;
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
246 }
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
247
787
ac18946afa74 refactoring of anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 782
diff changeset
248 DicomModification modification;
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
249 modification.SetAllowManualIdentifiers(true);
787
ac18946afa74 refactoring of anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 782
diff changeset
250
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
251 Json::Value request;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
252 ParseModifyRequest(request, modification, call);
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
253
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
254 modification.SetLevel(DetectModifyLevel(modification));
796
e7b1ca0f1e04 creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 795
diff changeset
255
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
256 static const char* TRANSCODE = "Transcode";
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
257 if (request.isMember(TRANSCODE))
3901
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
258 {
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
259 std::string s = SerializationToolbox::ReadString(request, TRANSCODE);
3901
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
260
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
261 DicomTransferSyntax syntax;
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
262 if (LookupTransferSyntax(syntax, s))
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
263 {
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
264 AnonymizeOrModifyInstance(modification, call, true, syntax);
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
265 }
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
266 else
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
267 {
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
268 throw OrthancException(ErrorCode_ParameterOutOfRange, "Unknown transfer syntax: " + s);
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
269 }
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
270 }
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
271 else
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
272 {
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
273 AnonymizeOrModifyInstance(modification, call, false /* no transcoding */,
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
274 DicomTransferSyntax_LittleEndianImplicit /* unused */);
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
275 }
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
276 }
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
277
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
278
974
83622b0f544c refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
279 static void AnonymizeInstance(RestApiPostCall& call)
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
280 {
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
281 if (call.IsDocumentation())
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
282 {
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
283 DocumentAnonymizationOptions(call);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
284 call.GetDocumentation()
4435
23ad1b9c7800 fix tag in openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4424
diff changeset
285 .SetTag("Instances")
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
286 .SetSummary("Anonymize instance")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
287 .SetDescription("Download an anonymized version of the DICOM instance whose Orthanc identifier is provided in the URL: "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
288 "https://book.orthanc-server.com/users/anonymization.html#anonymization-of-a-single-instance")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
289 .SetUriArgument("id", "Orthanc identifier of the instance of interest")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
290 .AddAnswerType(MimeType_Dicom, "The anonymized DICOM instance");
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
291 return;
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
292 }
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
293
787
ac18946afa74 refactoring of anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 782
diff changeset
294 DicomModification modification;
1279
7f3a65e84d4b More flexible /modify and /anonymize for single instance
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1160
diff changeset
295 modification.SetAllowManualIdentifiers(true);
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
296
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
297 Json::Value request;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
298 ParseAnonymizationRequest(request, modification, call);
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
299
3901
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
300 AnonymizeOrModifyInstance(modification, call, false /* no transcoding */,
603a7b86fa5f route "/instances/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
301 DicomTransferSyntax_LittleEndianImplicit /* unused */);
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
302 }
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
303
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
304
3942
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
305 static void SetKeepSource(CleaningInstancesJob& job,
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
306 const Json::Value& body)
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
307 {
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
308 static const char* KEEP_SOURCE = "KeepSource";
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
309 if (body.isMember(KEEP_SOURCE))
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
310 {
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
311 job.SetKeepSource(SerializationToolbox::ReadBoolean(body, KEEP_SOURCE));
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
312 }
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
313 }
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
314
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
315
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3709
diff changeset
316 static void SubmitModificationJob(std::unique_ptr<DicomModification>& modification,
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
317 bool isAnonymization,
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
318 RestApiPostCall& call,
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
319 const Json::Value& body,
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
320 ResourceType outputLevel /* unused for multiple resources */,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
321 bool isSingleResource,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
322 const std::set<std::string>& resources)
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
323 {
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
324 ServerContext& context = OrthancRestApi::GetContext(call);
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
325
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3709
diff changeset
326 std::unique_ptr<ResourceModificationJob> job(new ResourceModificationJob(context));
3942
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
327
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
328 if (isSingleResource) // This notably configures the output format
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
329 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
330 job->SetSingleResourceModification(modification.release(), outputLevel, isAnonymization);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
331 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
332 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
333 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
334 job->SetMultipleResourcesModification(modification.release(), isAnonymization);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
335 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
336
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
337 job->SetOrigin(call);
3942
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
338 SetKeepSource(*job, body);
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
339
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
340 static const char* TRANSCODE = "Transcode";
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
341 if (body.isMember(TRANSCODE))
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
342 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
343 job->SetTranscode(SerializationToolbox::ReadString(body, TRANSCODE));
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
344 }
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
345
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
346 for (std::set<std::string>::const_iterator
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
347 it = resources.begin(); it != resources.end(); ++it)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
348 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
349 context.AddChildInstances(*job, *it);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
350 }
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
351
3942
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
352 job->AddTrailingStep();
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
353
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
354 OrthancRestApi::GetApi(call).SubmitCommandsJob
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
355 (call, job.release(), true /* synchronous by default */, body);
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
356 }
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
357
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
358
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
359 static void SubmitModificationJob(std::unique_ptr<DicomModification>& modification,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
360 bool isAnonymization,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
361 RestApiPostCall& call,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
362 const Json::Value& body,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
363 ResourceType outputLevel)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
364 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
365 // This was the only flavor in Orthanc <= 1.9.3
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
366 std::set<std::string> resources;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
367 resources.insert(call.GetUriComponent("id", ""));
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
368
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
369 SubmitModificationJob(modification, isAnonymization, call, body, outputLevel,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
370 true /* single resource */, resources);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
371 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
372
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
373
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
374 static void SubmitBulkJob(std::unique_ptr<DicomModification>& modification,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
375 bool isAnonymization,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
376 RestApiPostCall& call,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
377 const Json::Value& body)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
378 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
379 std::set<std::string> resources;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
380 SerializationToolbox::ReadSetOfStrings(resources, body, "Resources");
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
381
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
382 SubmitModificationJob(modification, isAnonymization,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
383 call, body, ResourceType_Instance /* arbitrary value, unused */,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
384 false /* multiple resources */, resources);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
385 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
386
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
387
2639
75a404e40323 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
388 template <enum ResourceType resourceType>
974
83622b0f544c refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
389 static void ModifyResource(RestApiPostCall& call)
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
390 {
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
391 if (call.IsDocumentation())
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
392 {
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
393 OrthancRestApi::DocumentSubmitCommandsJob(call);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
394 DocumentModifyOptions(call);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
395 const std::string r = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
396 call.GetDocumentation()
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
397 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */))
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
398 .SetSummary("Modify " + r)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
399 .SetDescription("Start a job that will modify all the DICOM instances within the " + r +
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
400 " whose identifier is provided in the URL. The modified DICOM instances will be "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
401 "stored into a brand new " + r + ", whose Orthanc identifiers will be returned by the job. "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
402 "https://book.orthanc-server.com/users/anonymization.html#modification-of-studies-or-series")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
403 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest");
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
404 return;
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
405 }
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
406
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3709
diff changeset
407 std::unique_ptr<DicomModification> modification(new DicomModification);
2640
c691fcf66071 ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2639
diff changeset
408
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
409 Json::Value body;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
410 ParseModifyRequest(body, *modification, call);
2517
d3d306bc4b99 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
411
2639
75a404e40323 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
412 modification->SetLevel(resourceType);
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
413
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
414 SubmitModificationJob(modification, false /* not an anonymization */,
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
415 call, body, resourceType);
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
416 }
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
417
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
418
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
419 // New in Orthanc 1.9.4
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
420 static void BulkModify(RestApiPostCall& call)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
421 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
422 if (call.IsDocumentation())
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
423 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
424 OrthancRestApi::DocumentSubmitCommandsJob(call);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
425 DocumentModifyOptions(call);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
426 call.GetDocumentation()
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
427 .SetTag("System")
4694
da1edb7d6332 "/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4693
diff changeset
428 .SetSummary("Modify a set of resources")
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
429 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings,
4699
facea16b055b added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4694
diff changeset
430 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true)
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
431 .SetDescription("Start a job that will modify all the DICOM patients, studies, series or instances "
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
432 "whose identifiers are provided in the `Resources` field.")
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
433 .AddAnswerType(MimeType_Json, "The list of all the resources that have been altered by this modification");
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
434 return;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
435 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
436
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
437 std::unique_ptr<DicomModification> modification(new DicomModification);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
438
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
439 Json::Value body;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
440 ParseModifyRequest(body, *modification, call);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
441
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
442 modification->SetLevel(DetectModifyLevel(*modification));
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
443
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
444 SubmitBulkJob(modification, false /* not an anonymization */, call, body);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
445 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
446
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
447
2639
75a404e40323 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
448 template <enum ResourceType resourceType>
974
83622b0f544c refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
449 static void AnonymizeResource(RestApiPostCall& call)
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
450 {
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
451 if (call.IsDocumentation())
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
452 {
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
453 OrthancRestApi::DocumentSubmitCommandsJob(call);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
454 DocumentAnonymizationOptions(call);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
455 const std::string r = GetResourceTypeText(resourceType, false /* plural */, false /* lower case */);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
456 call.GetDocumentation()
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
457 .SetTag(GetResourceTypeText(resourceType, true /* plural */, true /* upper case */))
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
458 .SetSummary("Anonymize " + r)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
459 .SetDescription("Start a job that will anonymize all the DICOM instances within the " + r +
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
460 " whose identifier is provided in the URL. The modified DICOM instances will be "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
461 "stored into a brand new " + r + ", whose Orthanc identifiers will be returned by the job. "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
462 "https://book.orthanc-server.com/users/anonymization.html#anonymization-of-patients-studies-or-series")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
463 .SetUriArgument("id", "Orthanc identifier of the " + r + " of interest");
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
464 return;
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
465 }
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
466
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3709
diff changeset
467 std::unique_ptr<DicomModification> modification(new DicomModification);
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
468
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
469 Json::Value body;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
470 ParseAnonymizationRequest(body, *modification, call);
2640
c691fcf66071 ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2639
diff changeset
471
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
472 SubmitModificationJob(modification, true /* anonymization */,
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2867
diff changeset
473 call, body, resourceType);
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
474 }
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
475
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
476
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
477 // New in Orthanc 1.9.4
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
478 static void BulkAnonymize(RestApiPostCall& call)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
479 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
480 if (call.IsDocumentation())
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
481 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
482 OrthancRestApi::DocumentSubmitCommandsJob(call);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
483 DocumentAnonymizationOptions(call);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
484 call.GetDocumentation()
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
485 .SetTag("System")
4694
da1edb7d6332 "/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4693
diff changeset
486 .SetSummary("Anonymize a set of resources")
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
487 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings,
4699
facea16b055b added the "Level" argument to "/tools/bulk-content"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4694
diff changeset
488 "List of the Orthanc identifiers of the patients/studies/series/instances of interest.", true)
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
489 .SetDescription("Start a job that will anonymize all the DICOM patients, studies, series or instances "
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
490 "whose identifiers are provided in the `Resources` field.")
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
491 .AddAnswerType(MimeType_Json, "The list of all the resources that have been created by this anonymization");
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
492 return;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
493 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
494
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
495 std::unique_ptr<DicomModification> modification(new DicomModification);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
496
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
497 Json::Value body;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
498 ParseAnonymizationRequest(body, *modification, call);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
499
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
500 SubmitBulkJob(modification, true /* anonymization */, call, body);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
501 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
502
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
503
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
504 static void StoreCreatedInstance(std::string& id /* out */,
1572
904096e7367e More information about the origin request in OnStoredInstance() callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1570
diff changeset
505 RestApiPostCall& call,
2899
5dd649de253d POST-ing a DICOM file to "/instances" also answers the patient/study/series ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2869
diff changeset
506 ParsedDicomFile& dicom,
5dd649de253d POST-ing a DICOM file to "/instances" also answers the patient/study/series ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2869
diff changeset
507 bool sendAnswer)
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
508 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4479
diff changeset
509 std::unique_ptr<DicomInstanceToStore> toStore(DicomInstanceToStore::CreateFromParsedDicomFile(dicom));
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4479
diff changeset
510 toStore->SetOrigin(DicomInstanceOrigin::FromRest(call));
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
511
1572
904096e7367e More information about the origin request in OnStoredInstance() callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1570
diff changeset
512 ServerContext& context = OrthancRestApi::GetContext(call);
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4479
diff changeset
513 StoreStatus status = context.Store(id, *toStore, StoreInstanceMode_Default);
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
514
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
515 if (status == StoreStatus_Failure)
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
516 {
1582
bd1889029cbb encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1572
diff changeset
517 throw OrthancException(ErrorCode_CannotStoreInstance);
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
518 }
2899
5dd649de253d POST-ing a DICOM file to "/instances" also answers the patient/study/series ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2869
diff changeset
519
5dd649de253d POST-ing a DICOM file to "/instances" also answers the patient/study/series ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2869
diff changeset
520 if (sendAnswer)
5dd649de253d POST-ing a DICOM file to "/instances" also answers the patient/study/series ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2869
diff changeset
521 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4479
diff changeset
522 OrthancRestApi::GetApi(call).AnswerStoredInstance(call, *toStore, status, id);
2899
5dd649de253d POST-ing a DICOM file to "/instances" also answers the patient/study/series ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2869
diff changeset
523 }
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
524 }
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
525
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
526
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
527 static void CreateDicomV1(ParsedDicomFile& dicom,
1572
904096e7367e More information about the origin request in OnStoredInstance() callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1570
diff changeset
528 RestApiPostCall& call,
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
529 const Json::Value& request)
796
e7b1ca0f1e04 creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 795
diff changeset
530 {
e7b1ca0f1e04 creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 795
diff changeset
531 // curl http://localhost:8042/tools/create-dicom -X POST -d '{"PatientName":"Hello^World"}'
800
ecedd89055db generation of DICOM images from PNG files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 796
diff changeset
532 // curl http://localhost:8042/tools/create-dicom -X POST -d '{"PatientName":"Hello^World","PixelData":"data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAAAAAA6mKC9AAAACXBIWXMAAAsTAAALEwEAmpwYAAAAB3RJTUUH3gUGDDcB53FulQAAAElJREFUGNNtj0sSAEEEQ1+U+185s1CtmRkblQ9CZldsKHJDk6DLGLJa6chjh0ooQmpjXMM86zPwydGEj6Ed/UGykkEM8X+p3u8/8LcOJIWLGeMAAAAASUVORK5CYII="}'
796
e7b1ca0f1e04 creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 795
diff changeset
533
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
534 assert(request.isObject());
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
535 LOG(WARNING) << "Using a deprecated call to /tools/create-dicom";
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
536
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
537 Json::Value::Members members = request.getMemberNames();
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
538 for (size_t i = 0; i < members.size(); i++)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
539 {
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
540 const std::string& name = members[i];
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
541 if (request[name].type() != Json::stringValue)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
542 {
1582
bd1889029cbb encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1572
diff changeset
543 throw OrthancException(ErrorCode_CreateDicomNotString);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
544 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
545
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
546 std::string value = request[name].asString();
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
547
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
548 DicomTag tag = FromDcmtkBridge::ParseTag(name);
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
549 if (tag == DICOM_TAG_PIXEL_DATA)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
550 {
1562
2084b7c20478 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1558
diff changeset
551 dicom.EmbedContent(value);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
552 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
553 else
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
554 {
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
555 // This is V1, don't try and decode data URI scheme
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
556 dicom.ReplacePlainString(tag, value);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
557 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
558 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
559 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
560
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
561
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
562 static void InjectTags(ParsedDicomFile& dicom,
1641
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
563 const Json::Value& tags,
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
564 bool decodeBinaryTags,
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
565 const std::string& privateCreator,
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
566 bool force)
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
567 {
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
568 if (tags.type() != Json::objectValue)
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
569 {
2955
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2952
diff changeset
570 throw OrthancException(ErrorCode_BadRequest, "Tags field is not an array");
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
571 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
572
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
573 // Inject the user-specified tags
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
574 Json::Value::Members members = tags.getMemberNames();
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
575 for (size_t i = 0; i < members.size(); i++)
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
576 {
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
577 const std::string& name = members[i];
1641
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
578 DicomTag tag = FromDcmtkBridge::ParseTag(name);
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
579
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
580 if (tag != DICOM_TAG_SPECIFIC_CHARACTER_SET)
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
581 {
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
582 if (!force &&
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
583 tag != DICOM_TAG_PATIENT_ID &&
1640
48224db51ee7 allow override date/time when creating DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1616
diff changeset
584 tag != DICOM_TAG_ACQUISITION_DATE &&
48224db51ee7 allow override date/time when creating DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1616
diff changeset
585 tag != DICOM_TAG_ACQUISITION_TIME &&
48224db51ee7 allow override date/time when creating DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1616
diff changeset
586 tag != DICOM_TAG_CONTENT_DATE &&
48224db51ee7 allow override date/time when creating DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1616
diff changeset
587 tag != DICOM_TAG_CONTENT_TIME &&
48224db51ee7 allow override date/time when creating DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1616
diff changeset
588 tag != DICOM_TAG_INSTANCE_CREATION_DATE &&
48224db51ee7 allow override date/time when creating DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1616
diff changeset
589 tag != DICOM_TAG_INSTANCE_CREATION_TIME &&
48224db51ee7 allow override date/time when creating DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1616
diff changeset
590 tag != DICOM_TAG_SERIES_DATE &&
48224db51ee7 allow override date/time when creating DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1616
diff changeset
591 tag != DICOM_TAG_SERIES_TIME &&
48224db51ee7 allow override date/time when creating DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1616
diff changeset
592 tag != DICOM_TAG_STUDY_DATE &&
48224db51ee7 allow override date/time when creating DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1616
diff changeset
593 tag != DICOM_TAG_STUDY_TIME &&
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
594 dicom.HasTag(tag))
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
595 {
2952
4ceb9bf7b00c added details string in OrthancException
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2936
diff changeset
596 throw OrthancException(ErrorCode_CreateDicomOverrideTag, name);
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
597 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
598
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
599 if (tag == DICOM_TAG_PIXEL_DATA)
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
600 {
1582
bd1889029cbb encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1572
diff changeset
601 throw OrthancException(ErrorCode_CreateDicomUseContent);
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
602 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
603 else
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
604 {
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
605 dicom.Replace(tag, tags[name], decodeBinaryTags, DicomReplaceMode_InsertIfAbsent, privateCreator);
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
606 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
607 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
608 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
609 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
610
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
611
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
612 static void CreateSeries(RestApiPostCall& call,
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
613 ParsedDicomFile& base /* in */,
1641
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
614 const Json::Value& content,
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
615 bool decodeBinaryTags,
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
616 const std::string& privateCreator,
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
617 bool force)
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
618 {
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
619 assert(content.isArray());
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
620 assert(content.size() > 0);
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
621 ServerContext& context = OrthancRestApi::GetContext(call);
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
622
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
623 base.ReplacePlainString(DICOM_TAG_IMAGES_IN_ACQUISITION, boost::lexical_cast<std::string>(content.size()));
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
624 base.ReplacePlainString(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS, "1");
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
625
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
626 std::string someInstance;
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
627
1566
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
628 try
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
629 {
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
630 for (Json::ArrayIndex i = 0; i < content.size(); i++)
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
631 {
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3709
diff changeset
632 std::unique_ptr<ParsedDicomFile> dicom(base.Clone(false));
1566
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
633 const Json::Value* payload = NULL;
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
634
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
635 if (content[i].type() == Json::stringValue)
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
636 {
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
637 payload = &content[i];
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
638 }
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
639 else if (content[i].type() == Json::objectValue)
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
640 {
1566
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
641 if (!content[i].isMember("Content"))
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
642 {
1582
bd1889029cbb encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1572
diff changeset
643 throw OrthancException(ErrorCode_CreateDicomNoPayload);
1566
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
644 }
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
645
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
646 payload = &content[i]["Content"];
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
647
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
648 if (content[i].isMember("Tags"))
1570
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
649 {
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
650 InjectTags(*dicom, content[i]["Tags"], decodeBinaryTags, privateCreator, force);
1570
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
651 }
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
652 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
653
1566
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
654 if (payload == NULL ||
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
655 payload->type() != Json::stringValue)
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
656 {
1582
bd1889029cbb encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1572
diff changeset
657 throw OrthancException(ErrorCode_CreateDicomUseDataUriScheme);
1566
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
658 }
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
659
1566
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
660 dicom->EmbedContent(payload->asString());
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
661 dicom->ReplacePlainString(DICOM_TAG_INSTANCE_NUMBER, boost::lexical_cast<std::string>(i + 1));
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
662 dicom->ReplacePlainString(DICOM_TAG_IMAGE_INDEX, boost::lexical_cast<std::string>(i + 1));
1566
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
663
2899
5dd649de253d POST-ing a DICOM file to "/instances" also answers the patient/study/series ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2869
diff changeset
664 StoreCreatedInstance(someInstance, call, *dicom, false);
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
665 }
1566
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
666 }
1616
644c32c07306 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
667 catch (OrthancException&)
1566
3be6eb3757c8 error handling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1565
diff changeset
668 {
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
669 // Error: Remove the newly-created series
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
670
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
671 std::string series;
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
672 if (context.GetIndex().LookupParent(series, someInstance))
1570
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
673 {
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
674 Json::Value dummy;
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
675 context.GetIndex().DeleteResource(dummy, series, ResourceType_Series);
1570
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
676 }
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
677
1616
644c32c07306 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
678 throw;
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
679 }
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
680
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
681 std::string series;
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
682 if (context.GetIndex().LookupParent(series, someInstance))
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
683 {
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
684 OrthancRestApi::GetApi(call).AnswerStoredResource(call, series, ResourceType_Series, StoreStatus_Success);
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
685 }
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
686 }
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
687
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
688
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
689 static void CreateDicomV2(RestApiPostCall& call,
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
690 const Json::Value& request)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
691 {
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
692 static const char* const CONTENT = "Content";
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
693 static const char* const FORCE = "Force";
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
694 static const char* const INTERPRET_BINARY_TAGS = "InterpretBinaryTags";
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
695 static const char* const PARENT = "Parent";
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
696 static const char* const PRIVATE_CREATOR = "PrivateCreator";
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
697 static const char* const SPECIFIC_CHARACTER_SET_2 = "SpecificCharacterSet";
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
698 static const char* const TAGS = "Tags";
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
699 static const char* const TYPE = "Type";
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
700 static const char* const VALUE = "Value";
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
701
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
702 assert(request.isObject());
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
703 ServerContext& context = OrthancRestApi::GetContext(call);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
704
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
705 if (!request.isMember(TAGS) ||
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
706 request[TAGS].type() != Json::objectValue)
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
707 {
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
708 throw OrthancException(ErrorCode_BadRequest);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
709 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
710
1805
f08978b1f45b c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1699
diff changeset
711 ParsedDicomFile dicom(true);
1558
124de28b32ed fix encodings of newly created dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1557
diff changeset
712
1557
ad1e127b4ed5 fix in encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
713 {
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
714 Encoding encoding;
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
715
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
716 if (request[TAGS].isMember(SPECIFIC_CHARACTER_SET_2))
1558
124de28b32ed fix encodings of newly created dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1557
diff changeset
717 {
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
718 const char* tmp = request[TAGS][SPECIFIC_CHARACTER_SET_2].asCString();
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
719 if (!GetDicomEncoding(encoding, tmp))
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
720 {
2955
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2952
diff changeset
721 throw OrthancException(ErrorCode_ParameterOutOfRange,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2952
diff changeset
722 "Unknown specific character set: " + std::string(tmp));
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
723 }
1558
124de28b32ed fix encodings of newly created dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1557
diff changeset
724 }
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
725 else
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
726 {
2381
b8969010b534 uncoupling DCMTK primitives from Orthanc::Configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2361
diff changeset
727 encoding = GetDefaultDicomEncoding();
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
728 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
729
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
730 dicom.SetEncoding(encoding);
1557
ad1e127b4ed5 fix in encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
731 }
ad1e127b4ed5 fix in encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
732
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
733 ResourceType parentType = ResourceType_Instance;
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
734
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
735 if (request.isMember(PARENT))
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
736 {
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
737 // Locate the parent tags
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
738 std::string parent = request[PARENT].asString();
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
739 if (!context.GetIndex().LookupResourceType(parentType, parent))
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
740 {
1582
bd1889029cbb encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1572
diff changeset
741 throw OrthancException(ErrorCode_CreateDicomBadParent);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
742 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
743
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
744 if (parentType == ResourceType_Instance)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
745 {
1582
bd1889029cbb encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1572
diff changeset
746 throw OrthancException(ErrorCode_CreateDicomParentIsInstance);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
747 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
748
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
749 // Select one existing child instance of the parent resource, to
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
750 // retrieve all its tags
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
751 Json::Value siblingTags;
3009
750de70b3603 make "/tools/create-dicom" more tolerant to invalid specific character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2955
diff changeset
752 std::string siblingInstanceId;
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
753
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
754 {
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
755 // Retrieve all the instances of the parent resource
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
756 std::list<std::string> siblingInstances;
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
757 context.GetIndex().GetChildInstances(siblingInstances, parent);
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
758
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
759 if (siblingInstances.empty())
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
760 {
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
761 // Error: No instance (should never happen)
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
762 throw OrthancException(ErrorCode_InternalError);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
763 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
764
3009
750de70b3603 make "/tools/create-dicom" more tolerant to invalid specific character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2955
diff changeset
765 siblingInstanceId = siblingInstances.front();
750de70b3603 make "/tools/create-dicom" more tolerant to invalid specific character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2955
diff changeset
766 context.ReadDicomAsJson(siblingTags, siblingInstanceId);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
767 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
768
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
769
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
770 // Choose the same encoding as the parent resource
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
771 {
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
772 static const char* SPECIFIC_CHARACTER_SET = "0008,0005";
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
773
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
774 if (siblingTags.isMember(SPECIFIC_CHARACTER_SET))
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
775 {
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
776 Encoding encoding;
3009
750de70b3603 make "/tools/create-dicom" more tolerant to invalid specific character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2955
diff changeset
777
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
778 if (!siblingTags[SPECIFIC_CHARACTER_SET].isMember(VALUE) ||
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
779 siblingTags[SPECIFIC_CHARACTER_SET][VALUE].type() != Json::stringValue ||
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
780 !GetDicomEncoding(encoding, siblingTags[SPECIFIC_CHARACTER_SET][VALUE].asCString()))
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
781 {
3009
750de70b3603 make "/tools/create-dicom" more tolerant to invalid specific character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2955
diff changeset
782 LOG(WARNING) << "Instance with an incorrect Specific Character Set, "
750de70b3603 make "/tools/create-dicom" more tolerant to invalid specific character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2955
diff changeset
783 << "using the default Orthanc encoding: " << siblingInstanceId;
750de70b3603 make "/tools/create-dicom" more tolerant to invalid specific character set
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2955
diff changeset
784 encoding = GetDefaultDicomEncoding();
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
785 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
786
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
787 dicom.SetEncoding(encoding);
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
788 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
789 }
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
790
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
791
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
792 // Retrieve the tags for all the parent modules
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
793 typedef std::set<DicomTag> ModuleTags;
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
794 ModuleTags moduleTags;
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
795
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
796 ResourceType type = parentType;
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
797 for (;;)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
798 {
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
799 DicomTag::AddTagsForModule(moduleTags, GetModule(type));
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
800
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
801 if (type == ResourceType_Patient)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
802 {
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
803 break; // We're done
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
804 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
805
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
806 // Go up
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
807 std::string tmp;
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
808 if (!context.GetIndex().LookupParent(tmp, parent))
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
809 {
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
810 throw OrthancException(ErrorCode_InternalError);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
811 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
812
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
813 parent = tmp;
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
814 type = GetParentResourceType(type);
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
815 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
816
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
817 for (ModuleTags::const_iterator it = moduleTags.begin();
1616
644c32c07306 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
818 it != moduleTags.end(); ++it)
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
819 {
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
820 std::string t = it->Format();
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
821 if (siblingTags.isMember(t))
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
822 {
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
823 const Json::Value& tag = siblingTags[t];
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
824 if (tag[TYPE] == "Null")
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
825 {
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
826 dicom.ReplacePlainString(*it, "");
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
827 }
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
828 else if (tag[TYPE] == "String")
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
829 {
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
830 std::string value = tag[VALUE].asString(); // This is an UTF-8 value (as it comes from JSON)
3441
6cc72ebfd6ef Fix issue #141 (/tools/create-dicom removes non-ASCII characters from study description)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3217
diff changeset
831 dicom.ReplacePlainString(*it, value);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
832 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
833 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
834 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
835 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
836
1641
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
837
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1652
diff changeset
838 bool decodeBinaryTags = true;
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
839 if (request.isMember(INTERPRET_BINARY_TAGS))
1641
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
840 {
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
841 const Json::Value& v = request[INTERPRET_BINARY_TAGS];
1641
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
842 if (v.type() != Json::booleanValue)
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
843 {
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
844 throw OrthancException(ErrorCode_BadRequest);
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
845 }
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
846
1689
26083d84d237 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1652
diff changeset
847 decodeBinaryTags = v.asBool();
1641
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
848 }
4e56b5a206b7 Support of binary tags encoded using data URI scheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1640
diff changeset
849
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
850
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
851 // New argument in Orthanc 1.6.0
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
852 std::string privateCreator;
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
853 if (request.isMember(PRIVATE_CREATOR))
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
854 {
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
855 const Json::Value& v = request[PRIVATE_CREATOR];
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
856 if (v.type() != Json::stringValue)
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
857 {
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
858 throw OrthancException(ErrorCode_BadRequest);
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
859 }
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
860
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
861 privateCreator = v.asString();
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
862 }
3709
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
863 else
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
864 {
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
865 OrthancConfiguration::ReaderLock lock;
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
866 privateCreator = lock.GetConfiguration().GetDefaultPrivateCreator();
1f4910999fe7 Fix issue #168 (Plugins can't read private tags from the configuration file)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3691
diff changeset
867 }
3691
4922bdd046dd Fix issue #140 (Modifying private tags with REST API changes VR from LO to UN) - DANGEROUS COMMIT
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
868
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
869
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
870 // New in Orthanc 1.9.0
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
871 bool force = false;
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
872 if (request.isMember(FORCE))
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
873 {
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
874 const Json::Value& v = request[FORCE];
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
875 if (v.type() != Json::booleanValue)
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
876 {
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
877 throw OrthancException(ErrorCode_BadRequest);
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
878 }
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
879
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
880 force = v.asBool();
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
881 }
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
882
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
883
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
884 // Inject time-related information
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
885 std::string date, time;
2475
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
886 SystemToolbox::GetNowDicom(date, time, true /* use UTC time (not local time) */);
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
887 dicom.ReplacePlainString(DICOM_TAG_ACQUISITION_DATE, date);
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
888 dicom.ReplacePlainString(DICOM_TAG_ACQUISITION_TIME, time);
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
889 dicom.ReplacePlainString(DICOM_TAG_CONTENT_DATE, date);
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
890 dicom.ReplacePlainString(DICOM_TAG_CONTENT_TIME, time);
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
891 dicom.ReplacePlainString(DICOM_TAG_INSTANCE_CREATION_DATE, date);
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
892 dicom.ReplacePlainString(DICOM_TAG_INSTANCE_CREATION_TIME, time);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
893
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
894 if (parentType == ResourceType_Patient ||
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
895 parentType == ResourceType_Study ||
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
896 parentType == ResourceType_Instance /* no parent */)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
897 {
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
898 dicom.ReplacePlainString(DICOM_TAG_SERIES_DATE, date);
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
899 dicom.ReplacePlainString(DICOM_TAG_SERIES_TIME, time);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
900 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
901
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
902 if (parentType == ResourceType_Patient ||
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
903 parentType == ResourceType_Instance /* no parent */)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
904 {
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
905 dicom.ReplacePlainString(DICOM_TAG_STUDY_DATE, date);
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1934
diff changeset
906 dicom.ReplacePlainString(DICOM_TAG_STUDY_TIME, time);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
907 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
908
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
909
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
910 InjectTags(dicom, request[TAGS], decodeBinaryTags, privateCreator, force);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
911
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
912
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
913 // Inject the content (either an image, or a PDF file)
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
914 if (request.isMember(CONTENT))
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
915 {
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
916 const Json::Value& content = request[CONTENT];
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
917
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
918 if (content.type() == Json::stringValue)
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
919 {
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
920 dicom.EmbedContent(request[CONTENT].asString());
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
921
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
922 }
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
923 else if (content.type() == Json::arrayValue)
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
924 {
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
925 if (content.size() > 0)
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
926 {
1565
4b23310eb7e8 add tags per instances in a series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1564
diff changeset
927 // Let's create a series instead of a single instance
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
928 CreateSeries(call, dicom, content, decodeBinaryTags, privateCreator, force);
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
929 return;
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
930 }
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
931 }
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
932 else
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
933 {
1582
bd1889029cbb encoding of exceptions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1572
diff changeset
934 throw OrthancException(ErrorCode_CreateDicomUseDataUriScheme);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
935 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
936 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
937
1564
1b7def486e62 creation of DICOM series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1562
diff changeset
938 std::string id;
2899
5dd649de253d POST-ing a DICOM file to "/instances" also answers the patient/study/series ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2869
diff changeset
939 StoreCreatedInstance(id, call, dicom, true);
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
940 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
941
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
942
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
943 static void CreateDicom(RestApiPostCall& call)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
944 {
4422
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
945 if (call.IsDocumentation())
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
946 {
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
947 call.GetDocumentation()
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
948 .SetTag("System")
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
949 .SetSummary("Create one DICOM instance")
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
950 .SetDescription("Create one DICOM instance, and store it into Orthanc")
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
951 .SetRequestField("Tags", RestApiCallDocumentation::Type_JsonObject,
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
952 "Associative array containing the tags of the new instance to be created", true)
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
953 .SetRequestField("Content", RestApiCallDocumentation::Type_String,
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
954 "This field can be used to embed an image (pixel data) or a PDF inside the created DICOM instance. "
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
955 "The PNG image, the JPEG image or the PDF file must be provided using their "
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
956 "[data URI scheme encoding](https://en.wikipedia.org/wiki/Data_URI_scheme). "
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
957 "This field can possibly contain a JSON array, in which case a DICOM series is created "
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
958 "containing one DICOM instance for each item in the `Content` field.", false)
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
959 .SetRequestField("Parent", RestApiCallDocumentation::Type_String,
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
960 "If present, the newly created instance will be attached to the parent DICOM resource "
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
961 "whose Orthanc identifier is contained in this field. The DICOM tags of the parent "
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
962 "modules in the DICOM hierarchy will be automatically copied to the newly created instance.", false)
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
963 .SetRequestField("InterpretBinaryTags", RestApiCallDocumentation::Type_Boolean,
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
964 "If some value in the `Tags` associative array is formatted according to some "
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
965 "[data URI scheme encoding](https://en.wikipedia.org/wiki/Data_URI_scheme), "
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
966 "whether this value is decoded to a binary value or kept as such (`true` by default)", false)
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
967 .SetRequestField("PrivateCreator", RestApiCallDocumentation::Type_String,
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
968 "The private creator to be used for private tags in `Tags`", false)
4479
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
969 .SetRequestField("Force", RestApiCallDocumentation::Type_Boolean,
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
970 "Avoid the consistency checks for the DICOM tags that enforce the DICOM model of the real-world. "
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
971 "You can notably use this flag if you need to manually set the tags `StudyInstanceUID`, "
1619cffd1948 "/tools/create-dicom": New flag "Force" to bypass consistency checks for the DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
972 "`SeriesInstanceUID`, or `SOPInstanceUID`. Be careful with this feature.", false)
4422
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
973 .SetAnswerField("ID", RestApiCallDocumentation::Type_String, "Orthanc identifier of the newly created instance")
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
974 .SetAnswerField("Path", RestApiCallDocumentation::Type_String, "Path to access the instance in the REST API");
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
975 return;
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
976 }
48303e493135 cont openapi
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
977
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
978 Json::Value request;
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
979 if (!call.ParseJsonRequest(request) ||
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
980 !request.isObject())
1570
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
981 {
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
982 throw OrthancException(ErrorCode_BadRequest);
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
983 }
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
984
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
985 if (request.isMember("Tags"))
1570
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
986 {
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
987 CreateDicomV2(call, request);
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
988 }
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
989 else
1570
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
990 {
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
991 // Compatibility with Orthanc <= 0.9.3
1805
f08978b1f45b c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1699
diff changeset
992 ParsedDicomFile dicom(true);
1572
904096e7367e More information about the origin request in OnStoredInstance() callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1570
diff changeset
993 CreateDicomV1(dicom, call, request);
1569
27774f6f84e4 improved error handling in http answers
jodogne
parents: 1566
diff changeset
994
1570
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
995 std::string id;
2899
5dd649de253d POST-ing a DICOM file to "/instances" also answers the patient/study/series ID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2869
diff changeset
996 StoreCreatedInstance(id, call, dicom, true);
1570
2bd2c280f9b5 fix indentation
jodogne
parents: 1569
diff changeset
997 }
796
e7b1ca0f1e04 creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 795
diff changeset
998 }
e7b1ca0f1e04 creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 795
diff changeset
999
e7b1ca0f1e04 creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 795
diff changeset
1000
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1001 static void SplitStudy(RestApiPostCall& call)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1002 {
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1003 if (call.IsDocumentation())
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1004 {
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1005 OrthancRestApi::DocumentSubmitCommandsJob(call);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1006 call.GetDocumentation()
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1007 .SetTag("Studies")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1008 .SetSummary("Split study")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1009 .SetDescription("Start a new job so as to split the DICOM study whose Orthanc identifier is provided in the URL, "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1010 "by taking some of its children series out of it and putting them into a brand new study (this "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1011 "new study is created by setting the `StudyInstanceUID` tag to a random identifier): "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1012 "https://book.orthanc-server.com/users/anonymization.html#splitting")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1013 .SetUriArgument("id", "Orthanc identifier of the study of interest")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1014 .SetRequestField("Series", RestApiCallDocumentation::Type_JsonListOfStrings,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1015 "The list of series to be separated from the parent study (mandatory option). "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1016 "These series must all be children of the same source study, that is specified in the URI.", true)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1017 .SetRequestField("Replace", RestApiCallDocumentation::Type_JsonObject,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1018 "Associative array to change the value of some DICOM tags in the new study. "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1019 "These tags must be part of the \"Patient Module Attributes\" or the \"General Study "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1020 "Module Attributes\", as specified by the DICOM 2011 standard in Tables C.7-1 and C.7-3.", false)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1021 .SetRequestField("Remove", RestApiCallDocumentation::Type_JsonListOfStrings,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1022 "List of tags that must be removed in the new study (from the same modules as in the `Replace` option)", false)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1023 .SetRequestField("KeepSource", RestApiCallDocumentation::Type_Boolean,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1024 "If set to `true`, instructs Orthanc to keep a copy of the original series in the source study. "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1025 "By default, the original series are deleted from Orthanc.", false);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1026 return;
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1027 }
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1028
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1029 ServerContext& context = OrthancRestApi::GetContext(call);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1030
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1031 Json::Value request;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1032 if (!call.ParseJsonRequest(request))
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1033 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1034 // Bad JSON request
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1035 throw OrthancException(ErrorCode_BadFileFormat);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1036 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1037
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1038 const std::string study = call.GetUriComponent("id", "");
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1039
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3709
diff changeset
1040 std::unique_ptr<SplitStudyJob> job(new SplitStudyJob(context, study));
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1041 job->SetOrigin(call);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1042
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1043 std::vector<std::string> series;
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1044 SerializationToolbox::ReadArrayOfStrings(series, request, "Series");
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1045
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1046 for (size_t i = 0; i < series.size(); i++)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1047 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1048 job->AddSourceSeries(series[i]);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1049 }
3942
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
1050
2860
8b00e4cb4a6b SetOfCommandsJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2853
diff changeset
1051 job->AddTrailingStep();
8b00e4cb4a6b SetOfCommandsJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2853
diff changeset
1052
3942
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
1053 SetKeepSource(*job, request);
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1054
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1055 static const char* REMOVE = "Remove";
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1056 if (request.isMember(REMOVE))
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1057 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1058 if (request[REMOVE].type() != Json::arrayValue)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1059 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1060 throw OrthancException(ErrorCode_BadFileFormat);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1061 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1062
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1063 for (Json::Value::ArrayIndex i = 0; i < request[REMOVE].size(); i++)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1064 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1065 if (request[REMOVE][i].type() != Json::stringValue)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1066 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1067 throw OrthancException(ErrorCode_BadFileFormat);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1068 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1069 else
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1070 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1071 job->Remove(FromDcmtkBridge::ParseTag(request[REMOVE][i].asCString()));
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1072 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1073 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1074 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1075
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1076 static const char* REPLACE = "Replace";
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1077 if (request.isMember(REPLACE))
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1078 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1079 if (request[REPLACE].type() != Json::objectValue)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1080 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1081 throw OrthancException(ErrorCode_BadFileFormat);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1082 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1083
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1084 Json::Value::Members tags = request[REPLACE].getMemberNames();
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1085
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1086 for (size_t i = 0; i < tags.size(); i++)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1087 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1088 const Json::Value& value = request[REPLACE][tags[i]];
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1089
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1090 if (value.type() != Json::stringValue)
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1091 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1092 throw OrthancException(ErrorCode_BadFileFormat);
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1093 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1094 else
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1095 {
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1096 job->Replace(FromDcmtkBridge::ParseTag(tags[i]), value.asString());
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1097 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1098 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1099 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1100
2869
2bd87764709c refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2868
diff changeset
1101 OrthancRestApi::GetApi(call).SubmitCommandsJob
2bd87764709c refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2868
diff changeset
1102 (call, job.release(), true /* synchronous by default */, request);
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1103 }
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1104
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1105
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1106 static void MergeStudy(RestApiPostCall& call)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1107 {
4424
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1108 if (call.IsDocumentation())
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1109 {
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1110 OrthancRestApi::DocumentSubmitCommandsJob(call);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1111 call.GetDocumentation()
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1112 .SetTag("Studies")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1113 .SetSummary("Merge study")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1114 .SetDescription("Start a new job so as to move some DICOM series into the DICOM study whose Orthanc identifier "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1115 "is provided in the URL: https://book.orthanc-server.com/users/anonymization.html#merging")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1116 .SetUriArgument("id", "Orthanc identifier of the study of interest")
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1117 .SetRequestField("Resources", RestApiCallDocumentation::Type_JsonListOfStrings,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1118 "The list of DICOM resources (patients, studies, series, and/or instances) to be merged "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1119 "into the study of interest (mandatory option)", true)
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1120 .SetRequestField("KeepSource", RestApiCallDocumentation::Type_Boolean,
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1121 "If set to `true`, instructs Orthanc to keep a copy of the original resources in their source study. "
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1122 "By default, the original resources are deleted from Orthanc.", false);
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1123 return;
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1124 }
83371ccdfe80 openapi documentation is now completed
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4422
diff changeset
1125
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1126 ServerContext& context = OrthancRestApi::GetContext(call);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1127
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1128 Json::Value request;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1129 if (!call.ParseJsonRequest(request))
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1130 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1131 // Bad JSON request
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1132 throw OrthancException(ErrorCode_BadFileFormat);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1133 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1134
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1135 const std::string study = call.GetUriComponent("id", "");
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1136
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3709
diff changeset
1137 std::unique_ptr<MergeStudyJob> job(new MergeStudyJob(context, study));
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1138 job->SetOrigin(call);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1139
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1140 std::vector<std::string> resources;
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1141 SerializationToolbox::ReadArrayOfStrings(resources, request, "Resources");
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1142
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1143 for (size_t i = 0; i < resources.size(); i++)
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1144 {
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1145 job->AddSource(resources[i]);
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1146 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1147
2860
8b00e4cb4a6b SetOfCommandsJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2853
diff changeset
1148 job->AddTrailingStep();
8b00e4cb4a6b SetOfCommandsJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2853
diff changeset
1149
3942
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3930
diff changeset
1150 SetKeepSource(*job, request);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1151
2869
2bd87764709c refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2868
diff changeset
1152 OrthancRestApi::GetApi(call).SubmitCommandsJob
2bd87764709c refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2868
diff changeset
1153 (call, job.release(), true /* synchronous by default */, request);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1154 }
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1155
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1156
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1157 void OrthancRestApi::RegisterAnonymizeModify()
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1158 {
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1159 Register("/instances/{id}/modify", ModifyInstance);
2639
75a404e40323 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
1160 Register("/series/{id}/modify", ModifyResource<ResourceType_Series>);
75a404e40323 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
1161 Register("/studies/{id}/modify", ModifyResource<ResourceType_Study>);
75a404e40323 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
1162 Register("/patients/{id}/modify", ModifyResource<ResourceType_Patient>);
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
1163 Register("/tools/bulk-modify", BulkModify);
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1164
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1165 Register("/instances/{id}/anonymize", AnonymizeInstance);
2639
75a404e40323 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
1166 Register("/series/{id}/anonymize", AnonymizeResource<ResourceType_Series>);
75a404e40323 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
1167 Register("/studies/{id}/anonymize", AnonymizeResource<ResourceType_Study>);
75a404e40323 simplification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2521
diff changeset
1168 Register("/patients/{id}/anonymize", AnonymizeResource<ResourceType_Patient>);
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4687
diff changeset
1169 Register("/tools/bulk-anonymize", BulkAnonymize);
796
e7b1ca0f1e04 creation of dicom files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 795
diff changeset
1170
1120
009dce4ea2f6 /tools/create-dicom now accepts PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1010
diff changeset
1171 Register("/tools/create-dicom", CreateDicom);
2844
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1172
99863d6245b2 New URI: "/studies/.../split" to split a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
1173 Register("/studies/{id}/split", SplitStudy);
2853
52b017d22a4f New URI: "/studies/.../merge" to merge a study
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2844
diff changeset
1174 Register("/studies/{id}/merge", MergeStudy);
751
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1175 }
5197fd35333c refactoring of OrthancRestApi
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1176 }