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annotate OrthancServer/Sources/OrthancMoveRequestHandler.cpp @ 5640:f7adfb22e20e

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updated copyright, as Orthanc Team now replaces Osimis
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 30 May 2024 21:19:57 +0200
parents 48b8dae6dc77
children
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium
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6 * Copyright (C) 2024-2024 Orthanc Team SRL, Belgium
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7 * Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
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8 *
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9 * This program is free software: you can redistribute it and/or
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10 * modify it under the terms of the GNU General Public License as
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11 * published by the Free Software Foundation, either version 3 of the
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12 * License, or (at your option) any later version.
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13 *
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14 * This program is distributed in the hope that it will be useful, but
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15 * WITHOUT ANY WARRANTY; without even the implied warranty of
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16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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17 * General Public License for more details.
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18 *
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19 * You should have received a copy of the GNU General Public License
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20 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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21 **/
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22
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23
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24 #include "PrecompiledHeadersServer.h"
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25 #include "OrthancMoveRequestHandler.h"
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26
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27 #include "../../OrthancFramework/Sources/DicomFormat/DicomArray.h"
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28 #include "../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h"
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29 #include "../../OrthancFramework/Sources/Logging.h"
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30 #include "../../OrthancFramework/Sources/MetricsRegistry.h"
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31
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32 #include "OrthancConfiguration.h"
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33 #include "ServerContext.h"
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34 #include "ServerJobs/DicomModalityStoreJob.h"
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35
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36
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37 namespace Orthanc
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38 {
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39 namespace
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40 {
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41 // Anonymous namespace to avoid clashes between compilation modules
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42
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43 class SynchronousMove : public IMoveRequestIterator
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44 {
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45 private:
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46 ServerContext& context_;
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47 const std::string& localAet_;
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48 std::vector<std::string> instances_;
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49 size_t position_;
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50 RemoteModalityParameters remote_;
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51 std::string originatorAet_;
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52 uint16_t originatorId_;
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53 std::unique_ptr<DicomStoreUserConnection> connection_;
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54
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55 public:
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56 SynchronousMove(ServerContext& context,
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57 const std::string& targetAet,
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58 const std::vector<std::string>& publicIds,
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59 const std::string& originatorAet,
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60 uint16_t originatorId) :
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61 context_(context),
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62 localAet_(context.GetDefaultLocalApplicationEntityTitle()),
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63 position_(0),
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64 originatorAet_(originatorAet),
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65 originatorId_(originatorId)
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66 {
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67 {
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68 OrthancConfiguration::ReaderLock lock;
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69 remote_ = lock.GetConfiguration().GetModalityUsingAet(targetAet);
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70 }
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72 for (size_t i = 0; i < publicIds.size(); i++)
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73 {
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74 CLOG(INFO, DICOM) << "Sending resource " << publicIds[i] << " to modality \""
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75 << targetAet << "\" in synchronous mode";
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77 std::list<std::string> tmp;
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78 context_.GetIndex().GetChildInstances(tmp, publicIds[i]);
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80 instances_.reserve(tmp.size());
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81 for (std::list<std::string>::iterator it = tmp.begin(); it != tmp.end(); ++it)
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82 {
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83 instances_.push_back(*it);
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84 }
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85 }
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86 }
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87
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88 virtual unsigned int GetSubOperationCount() const
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89 {
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90 return instances_.size();
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91 }
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92
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93 virtual Status DoNext()
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94 {
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95 if (position_ >= instances_.size())
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96 {
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97 return Status_Failure;
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98 }
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99
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100 const std::string& id = instances_[position_++];
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101
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102 std::string dicom;
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103 context_.ReadDicom(dicom, id);
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104
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105 if (connection_.get() == NULL)
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106 {
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107 DicomAssociationParameters params(localAet_, remote_);
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108 connection_.reset(new DicomStoreUserConnection(params));
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109 }
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110
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111 std::string sopClassUid, sopInstanceUid; // Unused
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112 context_.StoreWithTranscoding(sopClassUid, sopInstanceUid, *connection_, dicom,
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113 true, originatorAet_, originatorId_);
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114
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115 return Status_Success;
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116 }
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117 };
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118
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119
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120 class AsynchronousMove : public IMoveRequestIterator
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121 {
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122 private:
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123 ServerContext& context_;
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124 std::unique_ptr<DicomModalityStoreJob> job_;
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125 size_t position_;
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126 size_t countInstances_;
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127
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128 public:
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129 AsynchronousMove(ServerContext& context,
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130 const std::string& targetAet,
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131 const std::vector<std::string>& publicIds,
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132 const std::string& originatorAet,
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133 uint16_t originatorId) :
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134 context_(context),
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135 job_(new DicomModalityStoreJob(context)),
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136 position_(0)
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137 {
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diff changeset
138 job_->SetDescription("C-MOVE");
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diff changeset
139 //job_->SetPermissive(true); // This was the behavior of Orthanc < 1.6.0
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diff changeset
140 job_->SetPermissive(false);
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diff changeset
141 job_->SetLocalAet(context.GetDefaultLocalApplicationEntityTitle());
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142
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diff changeset
143 {
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144 OrthancConfiguration::ReaderLock lock;
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diff changeset
145 job_->SetRemoteModality(lock.GetConfiguration().GetModalityUsingAet(targetAet));
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146 }
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147
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148 if (originatorId != 0)
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149 {
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150 job_->SetMoveOriginator(originatorAet, originatorId);
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151 }
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152
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153 for (size_t i = 0; i < publicIds.size(); i++)
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154 {
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diff changeset
155 CLOG(INFO, DICOM) << "Sending resource " << publicIds[i] << " to modality \""
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156 << targetAet << "\" in asynchronous mode";
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diff changeset
157
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diff changeset
158 std::list<std::string> tmp;
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diff changeset
159 context_.GetIndex().GetChildInstances(tmp, publicIds[i]);
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diff changeset
160
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diff changeset
161 countInstances_ = tmp.size();
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162
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163 job_->Reserve(job_->GetCommandsCount() + tmp.size());
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164
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165 for (std::list<std::string>::iterator it = tmp.begin(); it != tmp.end(); ++it)
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166 {
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diff changeset
167 job_->AddInstance(*it);
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168 }
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169 }
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170 }
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171
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172 virtual unsigned int GetSubOperationCount() const
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173 {
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diff changeset
174 return countInstances_;
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175 }
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176
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177 virtual Status DoNext()
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178 {
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diff changeset
179 if (position_ >= countInstances_)
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180 {
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diff changeset
181 return Status_Failure;
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182 }
8a9eb767280c Fix issue #128 (Asynchronous C-MOVE: invalid number of remaining sub-operations)
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diff changeset
183
2624
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diff changeset
184 if (position_ == 0)
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diff changeset
185 {
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diff changeset
186 context_.GetJobsEngine().GetRegistry().Submit(job_.release(), 0 /* priority */);
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diff changeset
187 }
3157
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diff changeset
188
8a9eb767280c Fix issue #128 (Asynchronous C-MOVE: invalid number of remaining sub-operations)
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diff changeset
189 position_ ++;
8a9eb767280c Fix issue #128 (Asynchronous C-MOVE: invalid number of remaining sub-operations)
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diff changeset
190 return Status_Success;
2624
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diff changeset
191 }
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diff changeset
192 };
619
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diff changeset
193 }
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diff changeset
194
70d0f27e5bd3 refactoring
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diff changeset
195
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diff changeset
196 static bool IsNonEmptyTag(const DicomMap& dicom,
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diff changeset
197 const DicomTag& tag)
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198 {
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diff changeset
199 const DicomValue* value = dicom.TestAndGetValue(tag);
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diff changeset
200 if (value == NULL ||
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diff changeset
201 value->IsNull() ||
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
202 value->IsBinary())
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
203 {
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
204 return false;
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
205 }
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
206 else
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
207 {
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
208 return !value->GetContent().empty();
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
209 }
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
210 }
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4045
diff changeset
211
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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parents: 4045
diff changeset
212
3301
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parents: 3174
diff changeset
213 bool OrthancMoveRequestHandler::LookupIdentifiers(std::vector<std::string>& publicIds,
6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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diff changeset
214 ResourceType level,
6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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diff changeset
215 const DicomMap& input)
619
70d0f27e5bd3 refactoring
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parents:
diff changeset
216 {
1724
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diff changeset
217 DicomTag tag(0, 0); // Dummy initialization
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
218
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diff changeset
219 switch (level)
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
220 {
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
221 case ResourceType_Patient:
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diff changeset
222 tag = DICOM_TAG_PATIENT_ID;
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diff changeset
223 break;
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parents: 1721
diff changeset
224
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
225 case ResourceType_Study:
4165
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
226 // The test below using "IsNonEmptyTag()" fixes compatibility
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
227 // with Ambra C-FIND SCU:
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diff changeset
228 // https://groups.google.com/g/orthanc-users/c/yIUnZ9v9-Zs/m/GQPXiAOiCQAJ
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
229 if (IsNonEmptyTag(input, DICOM_TAG_ACCESSION_NUMBER))
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
230 {
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
231 tag = DICOM_TAG_ACCESSION_NUMBER;
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diff changeset
232 }
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
233 else
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
234 {
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
235 tag = DICOM_TAG_STUDY_INSTANCE_UID;
e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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diff changeset
236 }
1724
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parents: 1721
diff changeset
237 break;
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
238
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
239 case ResourceType_Series:
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
240 tag = DICOM_TAG_SERIES_INSTANCE_UID;
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
241 break;
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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parents: 1721
diff changeset
242
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
243 case ResourceType_Instance:
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
244 tag = DICOM_TAG_SOP_INSTANCE_UID;
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
245 break;
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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parents: 1721
diff changeset
246
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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parents: 1721
diff changeset
247 default:
7e0b5e413c7c C-Move SCP for studies using AccessionNumber tag
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diff changeset
248 throw OrthancException(ErrorCode_ParameterOutOfRange);
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diff changeset
249 }
1721
3bcb01028107 removed another flavor of ServerIndex::LookupIdentifier
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parents: 1573
diff changeset
250
619
70d0f27e5bd3 refactoring
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parents:
diff changeset
251 if (!input.HasTag(tag))
70d0f27e5bd3 refactoring
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parents:
diff changeset
252 {
70d0f27e5bd3 refactoring
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parents:
diff changeset
253 return false;
70d0f27e5bd3 refactoring
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parents:
diff changeset
254 }
70d0f27e5bd3 refactoring
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parents:
diff changeset
255
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
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parents: 1724
diff changeset
256 const DicomValue& value = input.GetValue(tag);
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257 if (value.IsNull() ||
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258 value.IsBinary())
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259 {
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260 return false;
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261 }
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262 else
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263 {
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264 const std::string& content = value.GetContent();
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265
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266 /**
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267 * This tokenization fixes issue 154 ("Matching against list of
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268 * UID-s by C-MOVE").
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269 * https://orthanc.uclouvain.be/bugs/show_bug.cgi?id=154
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270 **/
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271
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272 std::vector<std::string> tokens;
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273 Toolbox::TokenizeString(tokens, content, '\\');
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274 for (size_t i = 0; i < tokens.size(); i++)
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275 {
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276 std::vector<std::string> matches;
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277 context_.GetIndex().LookupIdentifierExact(matches, level, tag, tokens[i]);
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278
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279 // Concatenate "publicIds" with "matches"
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280 publicIds.insert(publicIds.end(), matches.begin(), matches.end());
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281 }
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282
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283 return true;
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284 }
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285 }
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286
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287
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288 static IMoveRequestIterator* CreateIterator(ServerContext& context,
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289 const std::string& targetAet,
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290 const std::vector<std::string>& publicIds,
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291 const std::string& originatorAet,
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292 uint16_t originatorId)
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293 {
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294 if (publicIds.empty())
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295 {
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296 throw OrthancException(ErrorCode_BadRequest,
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297 "C-MOVE request matching no resource stored in Orthanc");
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298 }
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diff changeset
299
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300 bool synchronous;
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301
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302 {
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303 OrthancConfiguration::ReaderLock lock;
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304 synchronous = lock.GetConfiguration().GetBooleanParameter("SynchronousCMove", true);
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305 }
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306
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307 if (synchronous)
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308 {
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309 return new SynchronousMove(context, targetAet, publicIds, originatorAet, originatorId);
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310 }
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311 else
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312 {
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313 return new AsynchronousMove(context, targetAet, publicIds, originatorAet, originatorId);
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314 }
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315 }
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316
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diff changeset
317
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diff changeset
318 IMoveRequestIterator* OrthancMoveRequestHandler::Handle(const std::string& targetAet,
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diff changeset
319 const DicomMap& input,
2222
21713ce8717b Fix handling of Move Originator AET and ID in C-MOVE SCP
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diff changeset
320 const std::string& originatorIp,
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diff changeset
321 const std::string& originatorAet,
1909
21fcfc428dc2 another semantics for Originator Message ID
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diff changeset
322 const std::string& calledAet,
2222
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diff changeset
323 uint16_t originatorId)
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diff changeset
324 {
3174
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diff changeset
325 MetricsRegistry::Timer timer(context_.GetMetricsRegistry(), "orthanc_move_scp_duration_ms");
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diff changeset
326
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diff changeset
327 CLOG(INFO, DICOM) << "Move-SCU request received for AET \"" << targetAet << "\"";
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diff changeset
328
1371
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diff changeset
329 {
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diff changeset
330 DicomArray query(input);
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diff changeset
331 for (size_t i = 0; i < query.GetSize(); i++)
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diff changeset
332 {
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diff changeset
333 if (!query.GetElement(i).GetValue().IsNull())
f528849ee9f7 DICOM Query/Retrieve available from Orthanc Explorer
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parents: 1288
diff changeset
334 {
4313
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diff changeset
335 CLOG(INFO, DICOM) << " (" << query.GetElement(i).GetTag().Format()
91554aecff9a removed a friend method for better abi
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parents: 4287
diff changeset
336 << ") " << FromDcmtkBridge::GetTagName(query.GetElement(i))
4376
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diff changeset
337 << " = " << context_.GetDeidentifiedContent(query.GetElement(i));
1371
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diff changeset
338 }
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diff changeset
339 }
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diff changeset
340 }
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diff changeset
341
619
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diff changeset
342 /**
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diff changeset
343 * Retrieve the query level.
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diff changeset
344 **/
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diff changeset
345
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diff changeset
346 const DicomValue* levelTmp = input.TestAndGetValue(DICOM_TAG_QUERY_RETRIEVE_LEVEL);
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diff changeset
347
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diff changeset
348 if (levelTmp == NULL ||
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diff changeset
349 levelTmp->IsNull() ||
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diff changeset
350 levelTmp->IsBinary())
619
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diff changeset
351 {
1231
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diff changeset
352 // The query level is not present in the C-Move request, which
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diff changeset
353 // does not follow the DICOM standard. This is for instance the
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diff changeset
354 // behavior of Tudor DICOM. Try and automatically deduce the
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diff changeset
355 // query level: Start from the instance level, going up to the
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diff changeset
356 // patient level until a valid DICOM identifier is found.
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diff changeset
357
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diff changeset
358 std::vector<std::string> publicIds;
1231
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diff changeset
359
3301
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diff changeset
360 if (LookupIdentifiers(publicIds, ResourceType_Instance, input) ||
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diff changeset
361 LookupIdentifiers(publicIds, ResourceType_Series, input) ||
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diff changeset
362 LookupIdentifiers(publicIds, ResourceType_Study, input) ||
6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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diff changeset
363 LookupIdentifiers(publicIds, ResourceType_Patient, input))
1231
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diff changeset
364 {
3301
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diff changeset
365 return CreateIterator(context_, targetAet, publicIds, originatorAet, originatorId);
1231
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diff changeset
366 }
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diff changeset
367 else
703fcd797186 Support of Tudor DICOM in Query/Retrieve
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diff changeset
368 {
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diff changeset
369 // No identifier is present in the request.
3301
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diff changeset
370 throw OrthancException(ErrorCode_BadRequest, "Invalid fields in a C-MOVE request");
1231
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diff changeset
371 }
619
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parents:
diff changeset
372 }
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parents:
diff changeset
373
1721
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parents: 1573
diff changeset
374 assert(levelTmp != NULL);
1737
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parents: 1724
diff changeset
375 ResourceType level = StringToResourceType(levelTmp->GetContent().c_str());
1231
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parents: 1162
diff changeset
376
619
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parents:
diff changeset
377
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parents:
diff changeset
378 /**
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parents:
diff changeset
379 * Lookup for the resource to be sent.
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diff changeset
380 **/
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parents:
diff changeset
381
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6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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382 std::vector<std::string> publicIds;
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383
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6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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384 if (LookupIdentifiers(publicIds, level, input))
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385 {
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6ce10c3b1eb7 Fix issue #131 (C-MOVE failure due to duplicate StudyInstanceUID in the database)
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386 return CreateIterator(context_, targetAet, publicIds, originatorAet, originatorId);
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387 }
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388 else
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389 {
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e34c89e89aac Fix compatibility with C-MOVE SCU requests issued by Ambra
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390 throw OrthancException(ErrorCode_BadRequest, "No DICOM identifier provided in the C-MOVE request for this query retrieve level");
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391 }
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392 }
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393 }