annotate OrthancServer/Sources/Database/Upgrade4To5.sql @ 5640:f7adfb22e20e

updated copyright, as Orthanc Team now replaces Osimis
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 30 May 2024 21:19:57 +0200
parents 48b8dae6dc77
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
4124
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
1 -- Orthanc - A Lightweight, RESTful DICOM Store
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
2 -- Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
3 -- Department, University Hospital of Liege, Belgium
5640
f7adfb22e20e updated copyright, as Orthanc Team now replaces Osimis
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5485
diff changeset
4 -- Copyright (C) 2017-2023 Osimis S.A., Belgium
f7adfb22e20e updated copyright, as Orthanc Team now replaces Osimis
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5485
diff changeset
5 -- Copyright (C) 2024-2024 Orthanc Team SRL, Belgium
5485
48b8dae6dc77 upgrade to year 2024
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 5185
diff changeset
6 -- Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
4124
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
7 --
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
8 -- This program is free software: you can redistribute it and/or
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
9 -- modify it under the terms of the GNU General Public License as
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
10 -- published by the Free Software Foundation, either version 3 of the
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
11 -- License, or (at your option) any later version.
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
12 --
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
13 -- This program is distributed in the hope that it will be useful, but
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
14 -- WITHOUT ANY WARRANTY; without even the implied warranty of
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
15 -- MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
16 -- General Public License for more details.
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
17 --
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
18 -- You should have received a copy of the GNU General Public License
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
19 -- along with this program. If not, see <http://www.gnu.org/licenses/>.
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
20
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
21
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
22 --
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23 -- This SQLite script updates the version of the Orthanc database from 4 to 5.
4124
28944db5318b adding missing license headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
24 --
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
26
1159
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
27 -- Remove 2 indexes to speed up
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
28
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
29 DROP INDEX MainDicomTagsIndex2;
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
30 DROP INDEX MainDicomTagsIndexValues;
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31
1159
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
32
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
33 -- Add a new table to index the DICOM identifiers
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
34
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
35 CREATE TABLE DicomIdentifiers(
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE,
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
37 tagGroup INTEGER,
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
38 tagElement INTEGER,
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
39 value TEXT,
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
40 PRIMARY KEY(id, tagGroup, tagElement)
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
41 );
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
42
1159
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
43 CREATE INDEX DicomIdentifiersIndex1 ON DicomIdentifiers(id);
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
44 CREATE INDEX DicomIdentifiersIndex2 ON DicomIdentifiers(tagGroup, tagElement);
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
45 CREATE INDEX DicomIdentifiersIndexValues ON DicomIdentifiers(value COLLATE BINARY);
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
46
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
47
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
48 -- Migrate data from MainDicomTags to MainResourcesTags and MainInstancesTags
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
49
1159
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
50 INSERT INTO DicomIdentifiers SELECT * FROM MainDicomTags
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
51 WHERE ((tagGroup = 16 AND tagElement = 32) OR -- PatientID (0x0010, 0x0020)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
52 (tagGroup = 32 AND tagElement = 13) OR -- StudyInstanceUID (0x0020, 0x000d)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
53 (tagGroup = 8 AND tagElement = 80) OR -- AccessionNumber (0x0008, 0x0050)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
54 (tagGroup = 32 AND tagElement = 14) OR -- SeriesInstanceUID (0x0020, 0x000e)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
55 (tagGroup = 8 AND tagElement = 24)); -- SOPInstanceUID (0x0008, 0x0018)
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
56
1159
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
57 DELETE FROM MainDicomTags
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
58 WHERE ((tagGroup = 16 AND tagElement = 32) OR -- PatientID (0x0010, 0x0020)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
59 (tagGroup = 32 AND tagElement = 13) OR -- StudyInstanceUID (0x0020, 0x000d)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
60 (tagGroup = 8 AND tagElement = 80) OR -- AccessionNumber (0x0008, 0x0050)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
61 (tagGroup = 32 AND tagElement = 14) OR -- SeriesInstanceUID (0x0020, 0x000e)
8f9d49192815 speeding up db schema
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1158
diff changeset
62 (tagGroup = 8 AND tagElement = 24)); -- SOPInstanceUID (0x0008, 0x0018)
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
63
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
64
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
65 -- Upgrade the "ResourceDeleted" trigger
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
66
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
67 DROP TRIGGER ResourceDeleted;
1176
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
68 DROP TRIGGER ResourceDeletedParentCleaning;
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
69
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
70 CREATE TRIGGER ResourceDeleted
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
71 AFTER DELETE ON Resources
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
72 BEGIN
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
73 SELECT SignalResourceDeleted(old.publicId, old.resourceType);
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
74 SELECT SignalRemainingAncestor(parent.publicId, parent.resourceType)
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
75 FROM Resources AS parent WHERE internalId = old.parentId;
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
76 END;
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
77
1176
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
78 CREATE TRIGGER ResourceDeletedParentCleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
79 AFTER DELETE ON Resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
80 FOR EACH ROW WHEN (SELECT COUNT(*) FROM Resources WHERE parentId = old.parentId) = 0
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
81 BEGIN
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
82 DELETE FROM Resources WHERE internalId = old.parentId;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
83 END;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1159
diff changeset
84
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
85
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
86 -- Change the database version
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
87 -- The "1" corresponds to the "GlobalProperty_DatabaseSchemaVersion" enumeration
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
88
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
89 UPDATE GlobalProperties SET value="5" WHERE property=1;