Mercurial > hg > orthanc
annotate OrthancServer/ServerContext.cpp @ 3850:d729d6e8b484
removing useless abstraction IDicomConnectionManager
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Mon, 20 Apr 2020 14:45:21 +0200 |
parents | 0c16051dfd56 |
children | 5bba4d249422 |
rev | line source |
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224 | 1 /** |
2 * Orthanc - A Lightweight, RESTful DICOM Store | |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
224 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
8 * modify it under the terms of the GNU General Public License as | |
9 * published by the Free Software Foundation, either version 3 of the | |
10 * License, or (at your option) any later version. | |
11 * | |
12 * In addition, as a special exception, the copyright holders of this | |
13 * program give permission to link the code of its release with the | |
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
15 * that use the same license as the "OpenSSL" library), and distribute | |
16 * the linked executables. You must obey the GNU General Public License | |
17 * in all respects for all of the code used other than "OpenSSL". If you | |
18 * modify file(s) with this exception, you may extend this exception to | |
19 * your version of the file(s), but you are not obligated to do so. If | |
20 * you do not wish to do so, delete this exception statement from your | |
21 * version. If you delete this exception statement from all source files | |
22 * in the program, then also delete it here. | |
23 * | |
24 * This program is distributed in the hope that it will be useful, but | |
25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
27 * General Public License for more details. | |
28 * | |
29 * You should have received a copy of the GNU General Public License | |
30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
31 **/ | |
32 | |
33 | |
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34 #include "PrecompiledHeadersServer.h" |
224 | 35 #include "ServerContext.h" |
36 | |
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37 #include "../Core/Cache/SharedArchive.h" |
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38 #include "../Core/DicomParsing/FromDcmtkBridge.h" |
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39 #include "../Core/FileStorage/StorageAccessor.h" |
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40 #include "../Core/HttpServer/FilesystemHttpSender.h" |
1525 | 41 #include "../Core/HttpServer/HttpStreamTranscoder.h" |
3097 | 42 #include "../Core/JobsEngine/SetOfInstancesJob.h" |
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43 #include "../Core/Logging.h" |
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44 #include "../Core/MetricsRegistry.h" |
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45 #include "../Plugins/Engine/OrthancPlugins.h" |
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46 |
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47 #include "OrthancConfiguration.h" |
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48 #include "OrthancRestApi/OrthancRestApi.h" |
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49 #include "Search/DatabaseLookup.h" |
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50 #include "ServerJobs/OrthancJobUnserializer.h" |
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51 #include "ServerToolbox.h" |
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52 #include "StorageCommitmentReports.h" |
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53 |
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54 #include <EmbeddedResources.h> |
794 | 55 #include <dcmtk/dcmdata/dcfilefo.h> |
224 | 56 |
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57 |
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58 |
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59 #define ENABLE_DICOM_CACHE 1 |
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60 |
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61 static const size_t DICOM_CACHE_SIZE = 2; |
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62 |
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63 /** |
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64 * IMPORTANT: We make the assumption that the same instance of |
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65 * FileStorage can be accessed from multiple threads. This seems OK |
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66 * since the filesystem implements the required locking mechanisms, |
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67 * but maybe a read-writer lock on the "FileStorage" could be |
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68 * useful. Conversely, "ServerIndex" already implements mutex-based |
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69 * locking. |
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70 **/ |
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71 |
224 | 72 namespace Orthanc |
73 { | |
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74 void ServerContext::ChangeThread(ServerContext* that, |
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75 unsigned int sleepDelay) |
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76 { |
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77 while (!that->done_) |
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78 { |
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79 std::unique_ptr<IDynamicObject> obj(that->pendingChanges_.Dequeue(sleepDelay)); |
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80 |
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81 if (obj.get() != NULL) |
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82 { |
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83 const ServerIndexChange& change = dynamic_cast<const ServerIndexChange&>(*obj.get()); |
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84 |
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85 boost::recursive_mutex::scoped_lock lock(that->listenersMutex_); |
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86 for (ServerListeners::iterator it = that->listeners_.begin(); |
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87 it != that->listeners_.end(); ++it) |
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88 { |
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89 try |
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90 { |
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91 try |
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92 { |
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93 it->GetListener().SignalChange(change); |
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94 } |
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95 catch (std::bad_alloc&) |
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96 { |
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97 LOG(ERROR) << "Not enough memory while signaling a change"; |
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98 } |
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99 catch (...) |
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100 { |
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101 throw OrthancException(ErrorCode_InternalError); |
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102 } |
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103 } |
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104 catch (OrthancException& e) |
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105 { |
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106 LOG(ERROR) << "Error in the " << it->GetDescription() |
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107 << " callback while signaling a change: " << e.What() |
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108 << " (code " << e.GetErrorCode() << ")"; |
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109 } |
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110 } |
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111 } |
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112 } |
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113 } |
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114 |
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115 |
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116 void ServerContext::SaveJobsThread(ServerContext* that, |
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117 unsigned int sleepDelay) |
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118 { |
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119 static const boost::posix_time::time_duration PERIODICITY = |
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120 boost::posix_time::seconds(10); |
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121 |
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122 boost::posix_time::ptime next = |
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123 boost::posix_time::microsec_clock::universal_time() + PERIODICITY; |
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124 |
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125 while (!that->done_) |
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126 { |
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127 boost::this_thread::sleep(boost::posix_time::milliseconds(sleepDelay)); |
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128 |
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129 if (that->haveJobsChanged_ || |
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130 boost::posix_time::microsec_clock::universal_time() >= next) |
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131 { |
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132 that->haveJobsChanged_ = false; |
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133 that->SaveJobsEngine(); |
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134 next = boost::posix_time::microsec_clock::universal_time() + PERIODICITY; |
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135 } |
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136 } |
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137 } |
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138 |
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139 |
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140 void ServerContext::SignalJobSubmitted(const std::string& jobId) |
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141 { |
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142 haveJobsChanged_ = true; |
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143 mainLua_.SignalJobSubmitted(jobId); |
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144 } |
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145 |
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146 |
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147 void ServerContext::SignalJobSuccess(const std::string& jobId) |
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148 { |
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149 haveJobsChanged_ = true; |
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150 mainLua_.SignalJobSuccess(jobId); |
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151 } |
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152 |
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153 |
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154 void ServerContext::SignalJobFailure(const std::string& jobId) |
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155 { |
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156 haveJobsChanged_ = true; |
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157 mainLua_.SignalJobFailure(jobId); |
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158 } |
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159 |
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160 |
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161 void ServerContext::SetupJobsEngine(bool unitTesting, |
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162 bool loadJobsFromDatabase) |
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163 { |
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164 if (loadJobsFromDatabase) |
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165 { |
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166 std::string serialized; |
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167 if (index_.LookupGlobalProperty(serialized, GlobalProperty_JobsRegistry)) |
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168 { |
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169 LOG(WARNING) << "Reloading the jobs from the last execution of Orthanc"; |
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170 OrthancJobUnserializer unserializer(*this); |
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171 |
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172 try |
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173 { |
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174 jobsEngine_.LoadRegistryFromString(unserializer, serialized); |
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175 } |
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176 catch (OrthancException& e) |
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177 { |
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178 LOG(WARNING) << "Cannot unserialize the jobs engine, starting anyway: " << e.What(); |
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179 } |
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180 } |
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181 else |
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182 { |
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183 LOG(INFO) << "The last execution of Orthanc has archived no job"; |
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184 } |
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185 } |
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186 else |
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187 { |
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188 LOG(INFO) << "Not reloading the jobs from the last execution of Orthanc"; |
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189 } |
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190 |
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191 jobsEngine_.GetRegistry().SetObserver(*this); |
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192 jobsEngine_.Start(); |
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193 isJobsEngineUnserialized_ = true; |
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194 |
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195 saveJobsThread_ = boost::thread(SaveJobsThread, this, (unitTesting ? 20 : 100)); |
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196 } |
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197 |
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198 |
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199 void ServerContext::SaveJobsEngine() |
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200 { |
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201 if (saveJobs_) |
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202 { |
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203 VLOG(1) << "Serializing the content of the jobs engine"; |
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204 |
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205 try |
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206 { |
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207 Json::Value value; |
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208 jobsEngine_.GetRegistry().Serialize(value); |
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209 |
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210 Json::FastWriter writer; |
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211 std::string serialized = writer.write(value); |
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212 |
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213 index_.SetGlobalProperty(GlobalProperty_JobsRegistry, serialized); |
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214 } |
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215 catch (OrthancException& e) |
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216 { |
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217 LOG(ERROR) << "Cannot serialize the jobs engine: " << e.What(); |
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218 } |
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219 } |
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220 } |
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221 |
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222 |
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223 ServerContext::ServerContext(IDatabaseWrapper& database, |
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224 IStorageArea& area, |
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225 bool unitTesting, |
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226 size_t maxCompletedJobs) : |
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227 index_(*this, database, (unitTesting ? 20 : 500)), |
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228 area_(area), |
656 | 229 compressionEnabled_(false), |
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230 storeMD5_(true), |
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231 provider_(*this), |
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232 dicomCache_(provider_, DICOM_CACHE_SIZE), |
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233 mainLua_(*this), |
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234 filterLua_(*this), |
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235 luaListener_(*this), |
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236 jobsEngine_(maxCompletedJobs), |
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237 #if ORTHANC_ENABLE_PLUGINS == 1 |
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238 plugins_(NULL), |
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239 #endif |
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240 done_(false), |
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241 haveJobsChanged_(false), |
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242 isJobsEngineUnserialized_(false), |
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243 metricsRegistry_(new MetricsRegistry), |
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244 isHttpServerSecure_(true), |
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245 isExecuteLuaEnabled_(false) |
224 | 246 { |
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247 { |
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248 OrthancConfiguration::ReaderLock lock; |
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249 |
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250 queryRetrieveArchive_.reset( |
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251 new SharedArchive(lock.GetConfiguration().GetUnsignedIntegerParameter("QueryRetrieveSize", 100))); |
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252 mediaArchive_.reset( |
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253 new SharedArchive(lock.GetConfiguration().GetUnsignedIntegerParameter("MediaArchiveSize", 1))); |
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254 defaultLocalAet_ = lock.GetConfiguration().GetStringParameter("DicomAet", "ORTHANC"); |
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255 jobsEngine_.SetWorkersCount(lock.GetConfiguration().GetUnsignedIntegerParameter("ConcurrentJobs", 2)); |
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256 saveJobs_ = lock.GetConfiguration().GetBooleanParameter("SaveJobs", true); |
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257 metricsRegistry_->SetEnabled(lock.GetConfiguration().GetBooleanParameter("MetricsEnabled", true)); |
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258 |
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259 // New configuration options in Orthanc 1.5.1 |
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260 findStorageAccessMode_ = StringToFindStorageAccessMode(lock.GetConfiguration().GetStringParameter("StorageAccessOnFind", "Always")); |
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261 limitFindInstances_ = lock.GetConfiguration().GetUnsignedIntegerParameter("LimitFindInstances", 0); |
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262 limitFindResults_ = lock.GetConfiguration().GetUnsignedIntegerParameter("LimitFindResults", 0); |
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263 |
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264 // New configuration option in Orthanc 1.6.0 |
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265 storageCommitmentReports_.reset(new StorageCommitmentReports(lock.GetConfiguration().GetUnsignedIntegerParameter("StorageCommitmentReportsSize", 100))); |
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266 } |
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267 |
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268 jobsEngine_.SetThreadSleep(unitTesting ? 20 : 200); |
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269 |
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270 listeners_.push_back(ServerListener(luaListener_, "Lua")); |
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271 changeThread_ = boost::thread(ChangeThread, this, (unitTesting ? 20 : 100)); |
224 | 272 } |
273 | |
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274 |
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275 |
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276 ServerContext::~ServerContext() |
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277 { |
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278 if (!done_) |
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279 { |
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280 LOG(ERROR) << "INTERNAL ERROR: ServerContext::Stop() should be invoked manually to avoid mess in the destruction order!"; |
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281 Stop(); |
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282 } |
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283 } |
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284 |
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285 |
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286 void ServerContext::Stop() |
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287 { |
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288 if (!done_) |
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289 { |
1459 | 290 { |
291 boost::recursive_mutex::scoped_lock lock(listenersMutex_); | |
292 listeners_.clear(); | |
293 } | |
294 | |
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295 done_ = true; |
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296 |
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297 if (changeThread_.joinable()) |
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298 { |
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299 changeThread_.join(); |
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300 } |
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301 |
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302 if (saveJobsThread_.joinable()) |
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303 { |
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304 saveJobsThread_.join(); |
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305 } |
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306 |
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307 jobsEngine_.GetRegistry().ResetObserver(); |
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308 |
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309 if (isJobsEngineUnserialized_) |
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310 { |
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311 // Avoid losing jobs if the JobsRegistry cannot be unserialized |
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312 SaveJobsEngine(); |
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313 } |
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314 |
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315 // Do not change the order below! |
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316 jobsEngine_.Stop(); |
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317 index_.Stop(); |
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318 } |
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319 } |
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320 |
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321 |
236 | 322 void ServerContext::SetCompressionEnabled(bool enabled) |
323 { | |
324 if (enabled) | |
325 LOG(WARNING) << "Disk compression is enabled"; | |
326 else | |
327 LOG(WARNING) << "Disk compression is disabled"; | |
328 | |
329 compressionEnabled_ = enabled; | |
330 } | |
331 | |
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332 |
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333 void ServerContext::RemoveFile(const std::string& fileUuid, |
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334 FileContentType type) |
227
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335 { |
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336 StorageAccessor accessor(area_, GetMetricsRegistry()); |
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337 accessor.Remove(fileUuid, type); |
227
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338 } |
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339 |
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340 |
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341 StoreStatus ServerContext::Store(std::string& resultPublicId, |
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342 DicomInstanceToStore& dicom) |
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343 { |
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344 try |
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345 { |
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346 MetricsRegistry::Timer timer(GetMetricsRegistry(), "orthanc_store_dicom_duration_ms"); |
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347 StorageAccessor accessor(area_, GetMetricsRegistry()); |
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348 |
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349 resultPublicId = dicom.GetHasher().HashInstance(); |
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350 |
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351 Json::Value simplifiedTags; |
2120 | 352 ServerToolbox::SimplifyTags(simplifiedTags, dicom.GetJson(), DicomToJsonFormat_Human); |
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353 |
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354 // Test if the instance must be filtered out |
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355 bool accepted = true; |
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356 |
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357 { |
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358 boost::recursive_mutex::scoped_lock lock(listenersMutex_); |
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359 |
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360 for (ServerListeners::iterator it = listeners_.begin(); it != listeners_.end(); ++it) |
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361 { |
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362 try |
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363 { |
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364 if (!it->GetListener().FilterIncomingInstance(dicom, simplifiedTags)) |
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365 { |
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366 accepted = false; |
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367 break; |
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368 } |
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369 } |
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370 catch (OrthancException& e) |
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371 { |
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372 LOG(ERROR) << "Error in the " << it->GetDescription() |
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373 << " callback while receiving an instance: " << e.What() |
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374 << " (code " << e.GetErrorCode() << ")"; |
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375 throw; |
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376 } |
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377 } |
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378 } |
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379 |
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380 if (!accepted) |
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381 { |
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382 LOG(INFO) << "An incoming instance has been discarded by the filter"; |
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383 return StoreStatus_FilteredOut; |
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384 } |
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385 |
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386 { |
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387 // Remove the file from the DicomCache (useful if |
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388 // "OverwriteInstances" is set to "true") |
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389 boost::mutex::scoped_lock lock(dicomCacheMutex_); |
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390 dicomCache_.Invalidate(resultPublicId); |
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391 } |
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392 |
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393 // TODO Should we use "gzip" instead? |
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394 CompressionType compression = (compressionEnabled_ ? CompressionType_ZlibWithSize : CompressionType_None); |
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395 |
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396 FileInfo dicomInfo = accessor.Write(dicom.GetBufferData(), dicom.GetBufferSize(), |
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397 FileContentType_Dicom, compression, storeMD5_); |
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398 FileInfo jsonInfo = accessor.Write(dicom.GetJson().toStyledString(), |
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399 FileContentType_DicomAsJson, compression, storeMD5_); |
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400 |
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401 ServerIndex::Attachments attachments; |
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402 attachments.push_back(dicomInfo); |
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403 attachments.push_back(jsonInfo); |
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404 |
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405 typedef std::map<MetadataType, std::string> InstanceMetadata; |
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406 InstanceMetadata instanceMetadata; |
1822 | 407 StoreStatus status = index_.Store(instanceMetadata, dicom, attachments); |
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408 |
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409 // Only keep the metadata for the "instance" level |
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410 dicom.GetMetadata().clear(); |
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411 |
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412 for (InstanceMetadata::const_iterator it = instanceMetadata.begin(); |
1304 | 413 it != instanceMetadata.end(); ++it) |
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414 { |
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415 dicom.GetMetadata().insert(std::make_pair(std::make_pair(ResourceType_Instance, it->first), |
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416 it->second)); |
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417 } |
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418 |
1004
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419 if (status != StoreStatus_Success) |
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420 { |
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421 accessor.Remove(dicomInfo); |
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422 accessor.Remove(jsonInfo); |
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423 } |
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424 |
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425 switch (status) |
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426 { |
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427 case StoreStatus_Success: |
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428 LOG(INFO) << "New instance stored"; |
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429 break; |
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430 |
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431 case StoreStatus_AlreadyStored: |
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432 LOG(INFO) << "Already stored"; |
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433 break; |
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434 |
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435 case StoreStatus_Failure: |
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436 LOG(ERROR) << "Store failure"; |
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437 break; |
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438 |
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439 default: |
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440 // This should never happen |
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441 break; |
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442 } |
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443 |
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444 if (status == StoreStatus_Success || |
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445 status == StoreStatus_AlreadyStored) |
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446 { |
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447 boost::recursive_mutex::scoped_lock lock(listenersMutex_); |
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448 |
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449 for (ServerListeners::iterator it = listeners_.begin(); it != listeners_.end(); ++it) |
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450 { |
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451 try |
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452 { |
1574
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453 it->GetListener().SignalStoredInstance(resultPublicId, dicom, simplifiedTags); |
1066
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454 } |
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455 catch (OrthancException& e) |
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456 { |
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457 LOG(ERROR) << "Error in the " << it->GetDescription() |
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458 << " callback while receiving an instance: " << e.What() |
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459 << " (code " << e.GetErrorCode() << ")"; |
1066
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460 } |
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|
461 } |
1004
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|
462 } |
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|
463 |
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|
464 return status; |
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|
465 } |
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|
466 catch (OrthancException& e) |
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467 { |
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468 if (e.GetErrorCode() == ErrorCode_InexistentTag) |
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|
469 { |
2380
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reorganization in macros
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2304
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|
470 dicom.GetSummary().LogMissingTagsForStore(); |
1004
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DicomInstanceToStore
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|
471 } |
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|
472 |
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473 throw; |
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|
474 } |
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diff
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|
475 } |
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diff
changeset
|
476 |
a226e0959d8b
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1002
diff
changeset
|
477 |
1146
200fcac0deb4
optimization for access to attachments
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478 void ServerContext::AnswerAttachment(RestApiOutput& output, |
1700
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479 const std::string& resourceId, |
1146
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480 FileContentType content) |
226
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diff
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|
481 { |
232
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482 FileInfo attachment; |
1700
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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483 if (!index_.LookupAttachment(attachment, resourceId, content)) |
232
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refactoring of attachments
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484 { |
1700
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485 throw OrthancException(ErrorCode_UnknownResource); |
236 | 486 } |
226
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refactoring to read files
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224
diff
changeset
|
487 |
3175
574890d14c92
new metrics: orthanc_store_dicom_duration_ms, orthanc_storage_[create|read|remove]_duration_ms
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3174
diff
changeset
|
488 StorageAccessor accessor(area_, GetMetricsRegistry()); |
1772
53e045b5a8ec
MIME content type can be associated to custom attachments (cf. "UserContentType")
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1758
diff
changeset
|
489 accessor.AnswerFile(output, attachment, GetFileContentMime(content)); |
226
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diff
changeset
|
490 } |
8a26a8e85edf
refactoring to read files
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parents:
224
diff
changeset
|
491 |
8a26a8e85edf
refactoring to read files
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parents:
224
diff
changeset
|
492 |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
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|
493 void ServerContext::ChangeAttachmentCompression(const std::string& resourceId, |
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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494 FileContentType attachmentType, |
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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|
495 CompressionType compression) |
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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|
496 { |
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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497 LOG(INFO) << "Changing compression type for attachment " |
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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498 << EnumerationToString(attachmentType) |
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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|
499 << " of resource " << resourceId << " to " |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
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|
500 << compression; |
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
501 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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502 FileInfo attachment; |
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503 if (!index_.LookupAttachment(attachment, resourceId, attachmentType)) |
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504 { |
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505 throw OrthancException(ErrorCode_UnknownResource); |
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506 } |
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507 |
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508 if (attachment.GetCompressionType() == compression) |
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509 { |
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510 // Nothing to do |
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511 return; |
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512 } |
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513 |
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514 std::string content; |
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515 |
3175
574890d14c92
new metrics: orthanc_store_dicom_duration_ms, orthanc_storage_[create|read|remove]_duration_ms
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516 StorageAccessor accessor(area_, GetMetricsRegistry()); |
1700
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517 accessor.Read(content, attachment); |
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518 |
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519 FileInfo modified = accessor.Write(content.empty() ? NULL : content.c_str(), |
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520 content.size(), attachmentType, compression, storeMD5_); |
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521 |
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522 try |
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523 { |
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524 StoreStatus status = index_.AddAttachment(modified, resourceId); |
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525 if (status != StoreStatus_Success) |
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526 { |
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527 accessor.Remove(modified); |
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528 throw OrthancException(ErrorCode_Database); |
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529 } |
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530 } |
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531 catch (OrthancException&) |
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532 { |
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533 accessor.Remove(modified); |
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534 throw; |
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535 } |
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536 } |
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537 |
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538 |
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539 void ServerContext::ReadDicomAsJsonInternal(std::string& result, |
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540 const std::string& instancePublicId) |
2127 | 541 { |
2128
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542 FileInfo attachment; |
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543 if (index_.LookupAttachment(attachment, instancePublicId, FileContentType_DicomAsJson)) |
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544 { |
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545 ReadAttachment(result, attachment); |
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546 } |
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547 else |
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548 { |
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549 // The "DICOM as JSON" summary is not available from the Orthanc |
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550 // store (most probably deleted), reconstruct it from the DICOM file |
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551 std::string dicom; |
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552 ReadDicom(dicom, instancePublicId); |
2128
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553 |
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554 LOG(INFO) << "Reconstructing the missing DICOM-as-JSON summary for instance: " |
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555 << instancePublicId; |
2128
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556 |
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557 ParsedDicomFile parsed(dicom); |
2128
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558 |
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559 Json::Value summary; |
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560 parsed.DatasetToJson(summary); |
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561 |
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562 result = summary.toStyledString(); |
2128
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563 |
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564 if (!AddAttachment(instancePublicId, FileContentType_DicomAsJson, |
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565 result.c_str(), result.size())) |
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566 { |
2956 | 567 throw OrthancException(ErrorCode_InternalError, |
568 "Cannot associate the DICOM-as-JSON summary to instance: " + instancePublicId); | |
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569 } |
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570 } |
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571 } |
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572 |
2128
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573 |
2409
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574 void ServerContext::ReadDicomAsJson(std::string& result, |
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575 const std::string& instancePublicId, |
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576 const std::set<DicomTag>& ignoreTagLength) |
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577 { |
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578 if (ignoreTagLength.empty()) |
2128
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579 { |
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580 ReadDicomAsJsonInternal(result, instancePublicId); |
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581 } |
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582 else |
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583 { |
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584 Json::Value tmp; |
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585 ReadDicomAsJson(tmp, instancePublicId, ignoreTagLength); |
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586 result = tmp.toStyledString(); |
2128
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diff
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587 } |
2127 | 588 } |
589 | |
590 | |
2124 | 591 void ServerContext::ReadDicomAsJson(Json::Value& result, |
2409
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592 const std::string& instancePublicId, |
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593 const std::set<DicomTag>& ignoreTagLength) |
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594 { |
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595 if (ignoreTagLength.empty()) |
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diff
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596 { |
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597 std::string tmp; |
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598 ReadDicomAsJsonInternal(tmp, instancePublicId); |
226
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599 |
2409
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diff
changeset
|
600 Json::Reader reader; |
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601 if (!reader.parse(tmp, result)) |
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602 { |
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|
603 throw OrthancException(ErrorCode_CorruptedFile); |
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diff
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|
604 } |
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diff
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|
605 } |
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|
606 else |
226
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diff
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|
607 { |
2409
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|
608 // The "DicomAsJson" attachment might have stored some tags as |
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diff
changeset
|
609 // "too long". We are forced to re-parse the DICOM file. |
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diff
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|
610 std::string dicom; |
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611 ReadDicom(dicom, instancePublicId); |
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ignore-length argument if retrieving DICOM tags
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612 |
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613 ParsedDicomFile parsed(dicom); |
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614 parsed.DatasetToJson(result, ignoreTagLength); |
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615 } |
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616 } |
227
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617 |
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618 |
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619 void ServerContext::ReadAttachment(std::string& result, |
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620 const std::string& instancePublicId, |
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621 FileContentType content, |
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622 bool uncompressIfNeeded) |
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623 { |
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624 FileInfo attachment; |
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625 if (!index_.LookupAttachment(attachment, instancePublicId, content)) |
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626 { |
2956 | 627 throw OrthancException(ErrorCode_InternalError, |
628 "Unable to read attachment " + EnumerationToString(content) + | |
629 " of instance " + instancePublicId); | |
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630 } |
1550 | 631 |
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632 assert(attachment.GetContentType() == content); |
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633 |
1550 | 634 if (uncompressIfNeeded) |
635 { | |
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636 ReadAttachment(result, attachment); |
1550 | 637 } |
638 else | |
639 { | |
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640 // Do not uncompress the content of the storage area, return the |
1550 | 641 // raw data |
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642 StorageAccessor accessor(area_, GetMetricsRegistry()); |
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643 accessor.ReadRaw(result, attachment); |
1550 | 644 } |
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645 } |
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646 |
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647 |
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648 void ServerContext::ReadAttachment(std::string& result, |
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649 const FileInfo& attachment) |
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650 { |
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651 // This will decompress the attachment |
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652 StorageAccessor accessor(area_, GetMetricsRegistry()); |
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653 accessor.Read(result, attachment); |
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654 } |
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655 |
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656 |
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657 IDynamicObject* ServerContext::DicomCacheProvider::Provide(const std::string& instancePublicId) |
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658 { |
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659 std::string content; |
2124 | 660 context_.ReadDicom(content, instancePublicId); |
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661 return new ParsedDicomFile(content); |
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662 } |
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663 |
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664 |
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665 ServerContext::DicomCacheLocker::DicomCacheLocker(ServerContext& that, |
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666 const std::string& instancePublicId) : |
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667 that_(that), |
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668 lock_(that_.dicomCacheMutex_) |
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669 { |
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670 #if ENABLE_DICOM_CACHE == 0 |
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671 static std::unique_ptr<IDynamicObject> p; |
3836 | 672 p.reset(that_.provider_.Provide(instancePublicId)); |
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673 dicom_ = dynamic_cast<ParsedDicomFile*>(p.get()); |
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674 #else |
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675 dicom_ = &dynamic_cast<ParsedDicomFile&>(that_.dicomCache_.Access(instancePublicId)); |
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676 #endif |
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677 } |
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678 |
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679 |
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680 ServerContext::DicomCacheLocker::~DicomCacheLocker() |
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681 { |
285
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682 } |
304 | 683 |
684 | |
695
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685 void ServerContext::SetStoreMD5ForAttachments(bool storeMD5) |
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686 { |
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687 LOG(INFO) << "Storing MD5 for attachments: " << (storeMD5 ? "yes" : "no"); |
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688 storeMD5_ = storeMD5; |
695
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689 } |
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690 |
699
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691 |
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692 bool ServerContext::AddAttachment(const std::string& resourceId, |
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693 FileContentType attachmentType, |
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694 const void* data, |
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695 size_t size) |
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696 { |
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697 LOG(INFO) << "Adding attachment " << EnumerationToString(attachmentType) << " to resource " << resourceId; |
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698 |
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699 // TODO Should we use "gzip" instead? |
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700 CompressionType compression = (compressionEnabled_ ? CompressionType_ZlibWithSize : CompressionType_None); |
699
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701 |
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702 StorageAccessor accessor(area_, GetMetricsRegistry()); |
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703 FileInfo attachment = accessor.Write(data, size, attachmentType, compression, storeMD5_); |
699
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704 |
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705 StoreStatus status = index_.AddAttachment(attachment, resourceId); |
699
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706 if (status != StoreStatus_Success) |
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707 { |
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708 accessor.Remove(attachment); |
699
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709 return false; |
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710 } |
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711 else |
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712 { |
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713 return true; |
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714 } |
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715 } |
1145
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716 |
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717 |
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718 bool ServerContext::DeleteResource(Json::Value& target, |
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719 const std::string& uuid, |
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720 ResourceType expectedType) |
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721 { |
2507 | 722 if (expectedType == ResourceType_Instance) |
723 { | |
724 // remove the file from the DicomCache | |
725 boost::mutex::scoped_lock lock(dicomCacheMutex_); | |
726 dicomCache_.Invalidate(uuid); | |
727 } | |
728 | |
1145
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729 return index_.DeleteResource(target, uuid, expectedType); |
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730 } |
1189
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|
731 |
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732 |
1198 | 733 void ServerContext::SignalChange(const ServerIndexChange& change) |
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734 { |
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735 pendingChanges_.Enqueue(change.Clone()); |
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736 } |
1232
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737 |
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738 |
2136
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739 #if ORTHANC_ENABLE_PLUGINS == 1 |
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740 void ServerContext::SetPlugins(OrthancPlugins& plugins) |
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741 { |
1459 | 742 boost::recursive_mutex::scoped_lock lock(listenersMutex_); |
743 | |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
744 plugins_ = &plugins; |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
745 |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
746 // TODO REFACTOR THIS |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
747 listeners_.clear(); |
2738
3a55b77339ff
fix deadlock in Lua scripts
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2716
diff
changeset
|
748 listeners_.push_back(ServerListener(luaListener_, "Lua")); |
1434
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
749 listeners_.push_back(ServerListener(plugins, "plugin")); |
1232
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
750 } |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
751 |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
752 |
1434
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
753 void ServerContext::ResetPlugins() |
1232
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
754 { |
1459 | 755 boost::recursive_mutex::scoped_lock lock(listenersMutex_); |
756 | |
1434
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
757 plugins_ = NULL; |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
758 |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
759 // TODO REFACTOR THIS |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
760 listeners_.clear(); |
2738
3a55b77339ff
fix deadlock in Lua scripts
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2716
diff
changeset
|
761 listeners_.push_back(ServerListener(luaListener_, "Lua")); |
1232
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
762 } |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
763 |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
764 |
1434
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
765 const OrthancPlugins& ServerContext::GetPlugins() const |
1232
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
766 { |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
767 if (HasPlugins()) |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
768 { |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
769 return *plugins_; |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
770 } |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
771 else |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
772 { |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
773 throw OrthancException(ErrorCode_InternalError); |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
774 } |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
775 } |
1632
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
776 |
1741
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
777 OrthancPlugins& ServerContext::GetPlugins() |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
778 { |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
779 if (HasPlugins()) |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
780 { |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
781 return *plugins_; |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
782 } |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
783 else |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
784 { |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
785 throw OrthancException(ErrorCode_InternalError); |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
786 } |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
787 } |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
788 |
1632
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
789 #endif |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
790 |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
791 |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
792 bool ServerContext::HasPlugins() const |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
793 { |
2136
dd609a99d39a
uniformization of the macro naming
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2135
diff
changeset
|
794 #if ORTHANC_ENABLE_PLUGINS == 1 |
1632
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fix build with plugins disabled
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parents:
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diff
changeset
|
795 return (plugins_ != NULL); |
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fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
796 #else |
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parents:
1582
diff
changeset
|
797 return false; |
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fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
798 #endif |
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fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
799 } |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
800 |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
801 |
3021
2cbafb5d5a62
renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3015
diff
changeset
|
802 void ServerContext::Apply(ILookupVisitor& visitor, |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3031
diff
changeset
|
803 const DatabaseLookup& lookup, |
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3031
diff
changeset
|
804 ResourceType queryLevel, |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
805 size_t since, |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
806 size_t limit) |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
807 { |
3679
6358923d3ced
C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3677
diff
changeset
|
808 unsigned int databaseLimit = (queryLevel == ResourceType_Instance ? |
6358923d3ced
C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3677
diff
changeset
|
809 limitFindInstances_ : limitFindResults_); |
3015
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
810 |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
811 std::vector<std::string> resources, instances; |
3015
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
812 |
3204
8792867b739a
fix incorrect "too many results"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3175
diff
changeset
|
813 { |
8792867b739a
fix incorrect "too many results"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3175
diff
changeset
|
814 const size_t lookupLimit = (databaseLimit == 0 ? 0 : databaseLimit + 1); |
8792867b739a
fix incorrect "too many results"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3175
diff
changeset
|
815 GetIndex().ApplyLookupResources(resources, &instances, lookup, queryLevel, lookupLimit); |
8792867b739a
fix incorrect "too many results"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3175
diff
changeset
|
816 } |
3025
039a9d262d64
preparing to speed up find in databases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3021
diff
changeset
|
817 |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3031
diff
changeset
|
818 bool complete = (databaseLimit == 0 || |
3204
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fix incorrect "too many results"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
819 resources.size() <= databaseLimit); |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
820 |
3005
8265a6b56100
DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
821 LOG(INFO) << "Number of candidate resources after fast DB filtering on main DICOM tags: " << resources.size(); |
3003
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
822 |
3679
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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parents:
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diff
changeset
|
823 /** |
6358923d3ced
C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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parents:
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diff
changeset
|
824 * "resources" contains the Orthanc ID of the resource at level |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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diff
changeset
|
825 * "queryLevel", "instances" contains one the Orthanc ID of one |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
826 * sample instance from this resource. |
6358923d3ced
C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
827 **/ |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
828 assert(resources.size() == instances.size()); |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
829 |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2965
diff
changeset
|
830 size_t countResults = 0; |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
831 size_t skipped = 0; |
3015
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
832 |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
833 const bool isDicomAsJsonNeeded = visitor.IsDicomAsJsonNeeded(); |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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parents:
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diff
changeset
|
834 |
1757
98abb8d7f905
ServerContext::Apply lookup
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parents:
1741
diff
changeset
|
835 for (size_t i = 0; i < instances.size(); i++) |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
836 { |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
837 // Optimization in Orthanc 1.5.1 - Don't read the full JSON from |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
838 // the disk if only "main DICOM tags" are to be returned |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
839 |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3679
diff
changeset
|
840 std::unique_ptr<Json::Value> dicomAsJson; |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
841 |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
842 bool hasOnlyMainDicomTags; |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
843 DicomMap dicom; |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
844 |
3677
4182cde57afb
refactoring FindStorageAccessMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
845 if (findStorageAccessMode_ == FindStorageAccessMode_DatabaseOnly || |
4182cde57afb
refactoring FindStorageAccessMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
846 findStorageAccessMode_ == FindStorageAccessMode_DiskOnAnswer || |
3015
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
847 lookup.HasOnlyMainDicomTags()) |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
848 { |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
849 // Case (1): The main DICOM tags, as stored in the database, |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
850 // are sufficient to look for match |
3015
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
851 |
3679
6358923d3ced
C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
852 DicomMap tmp; |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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diff
changeset
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853 if (!GetIndex().GetAllMainDicomTags(tmp, instances[i])) |
3015
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
854 { |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
855 // The instance has been removed during the execution of the |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
856 // lookup, ignore it |
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On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
857 continue; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
858 } |
3679
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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parents:
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diff
changeset
|
859 |
6358923d3ced
C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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parents:
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diff
changeset
|
860 #if 1 |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
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861 // New in Orthanc 1.6.0: Only keep the main DICOM tags at the |
6358923d3ced
C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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parents:
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diff
changeset
|
862 // level of interest for the query |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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parents:
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diff
changeset
|
863 switch (queryLevel) |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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parents:
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diff
changeset
|
864 { |
6358923d3ced
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parents:
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diff
changeset
|
865 // WARNING: Don't reorder cases below, and don't add "break" |
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diff
changeset
|
866 case ResourceType_Instance: |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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diff
changeset
|
867 dicom.MergeMainDicomTags(tmp, ResourceType_Instance); |
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868 |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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changeset
|
869 case ResourceType_Series: |
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diff
changeset
|
870 dicom.MergeMainDicomTags(tmp, ResourceType_Series); |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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diff
changeset
|
871 |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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diff
changeset
|
872 case ResourceType_Study: |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
873 dicom.MergeMainDicomTags(tmp, ResourceType_Study); |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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changeset
|
874 |
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diff
changeset
|
875 case ResourceType_Patient: |
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diff
changeset
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876 dicom.MergeMainDicomTags(tmp, ResourceType_Patient); |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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diff
changeset
|
877 break; |
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diff
changeset
|
878 |
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parents:
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diff
changeset
|
879 default: |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
880 throw OrthancException(ErrorCode_InternalError); |
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diff
changeset
|
881 } |
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parents:
3677
diff
changeset
|
882 |
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parents:
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diff
changeset
|
883 // Special case of the "Modality" at the study level, in order |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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diff
changeset
|
884 // to deal with C-FIND on "ModalitiesInStudy" (0008,0061). |
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diff
changeset
|
885 // Check out integration test "test_rest_modalities_in_study". |
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diff
changeset
|
886 if (queryLevel == ResourceType_Study) |
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changeset
|
887 { |
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diff
changeset
|
888 dicom.CopyTagIfExists(tmp, DICOM_TAG_MODALITY); |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
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parents:
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diff
changeset
|
889 } |
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diff
changeset
|
890 #else |
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diff
changeset
|
891 dicom.Assign(tmp); // This emulates Orthanc <= 1.5.8 |
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C-FIND: forbid wildcard matching on some VRs, ignore main tags below the queried level
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
892 #endif |
3015
abe49ca61cd5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
893 |
3012
af1530b45290
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
894 hasOnlyMainDicomTags = true; |
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Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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parents:
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diff
changeset
|
895 } |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
896 else |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
897 { |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
898 // Case (2): Need to read the "DICOM-as-JSON" attachment from |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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diff
changeset
|
899 // the storage area |
af1530b45290
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
900 dicomAsJson.reset(new Json::Value); |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
901 ReadDicomAsJson(*dicomAsJson, instances[i]); |
af1530b45290
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
902 |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
903 dicom.FromDicomAsJson(*dicomAsJson); |
af1530b45290
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
904 |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
905 // This map contains the entire JSON, i.e. more than the main DICOM tags |
af1530b45290
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
906 hasOnlyMainDicomTags = false; |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
907 } |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
908 |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
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1741
diff
changeset
|
909 if (lookup.IsMatch(dicom)) |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
910 { |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
911 if (skipped < since) |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
912 { |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
913 skipped++; |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
914 } |
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
915 else if (limit != 0 && |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2965
diff
changeset
|
916 countResults >= limit) |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
917 { |
3003
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
918 // Too many results, don't mark as complete |
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
919 complete = false; |
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
920 break; |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
921 } |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
922 else |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
923 { |
3677
4182cde57afb
refactoring FindStorageAccessMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
924 if ((findStorageAccessMode_ == FindStorageAccessMode_DiskOnLookupAndAnswer || |
4182cde57afb
refactoring FindStorageAccessMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
925 findStorageAccessMode_ == FindStorageAccessMode_DiskOnAnswer) && |
3015
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
926 dicomAsJson.get() == NULL && |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
927 isDicomAsJsonNeeded) |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
928 { |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
929 dicomAsJson.reset(new Json::Value); |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
930 ReadDicomAsJson(*dicomAsJson, instances[i]); |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
931 } |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
932 |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
933 if (hasOnlyMainDicomTags) |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
934 { |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
935 // This is Case (1): The variable "dicom" only contains the main DICOM tags |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
936 visitor.Visit(resources[i], instances[i], dicom, dicomAsJson.get()); |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
937 } |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
938 else |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
939 { |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
940 // Remove the non-main DICOM tags from "dicom" if Case (2) |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
941 // was used, for consistency with Case (1) |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
942 |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
943 DicomMap mainDicomTags; |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
944 mainDicomTags.ExtractMainDicomTags(dicom); |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
945 visitor.Visit(resources[i], instances[i], mainDicomTags, dicomAsJson.get()); |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
946 } |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
947 |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
948 countResults ++; |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
949 } |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
950 } |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
951 } |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
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2965
diff
changeset
|
952 |
3003
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refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
953 if (complete) |
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refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
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|
954 { |
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
955 visitor.MarkAsComplete(); |
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
956 } |
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
957 |
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
958 LOG(INFO) << "Number of matching resources: " << countResults; |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
959 } |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
960 |
2626 | 961 |
3015
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
962 bool ServerContext::LookupOrReconstructMetadata(std::string& target, |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
963 const std::string& publicId, |
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On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
964 MetadataType metadata) |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
965 { |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
966 // This is a backwards-compatibility function, that can |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
967 // reconstruct metadata that were not generated by an older |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
968 // release of Orthanc |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
969 |
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On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
970 if (metadata == MetadataType_Instance_SopClassUid || |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
971 metadata == MetadataType_Instance_TransferSyntax) |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
972 { |
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On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
973 if (index_.LookupMetadata(target, publicId, metadata)) |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
974 { |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
975 return true; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
976 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
977 else |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
978 { |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
979 // These metadata are mandatory in DICOM instances, and were |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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3012
diff
changeset
|
980 // introduced in Orthanc 1.2.0. The fact that |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
981 // "LookupMetadata()" has failed indicates that this database |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
982 // comes from an older release of Orthanc. |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
983 |
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On C-FIND, avoid accessing the storage area whenever possible
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diff
changeset
|
984 DicomTag tag(0, 0); |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
985 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
986 switch (metadata) |
abe49ca61cd5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
987 { |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
988 case MetadataType_Instance_SopClassUid: |
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diff
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|
989 tag = DICOM_TAG_SOP_CLASS_UID; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
990 break; |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
991 |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
992 case MetadataType_Instance_TransferSyntax: |
abe49ca61cd5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
993 tag = DICOM_TAG_TRANSFER_SYNTAX_UID; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
994 break; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
995 |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
3012
diff
changeset
|
996 default: |
abe49ca61cd5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
997 throw OrthancException(ErrorCode_InternalError); |
abe49ca61cd5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
998 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
999 |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1000 Json::Value dicomAsJson; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
1001 ReadDicomAsJson(dicomAsJson, publicId); |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
3012
diff
changeset
|
1002 |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1003 DicomMap tags; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1004 tags.FromDicomAsJson(dicomAsJson); |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1005 |
abe49ca61cd5
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diff
changeset
|
1006 const DicomValue* value = tags.TestAndGetValue(tag); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1007 |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1008 if (value != NULL && |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1009 !value->IsNull() && |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1010 !value->IsBinary()) |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1011 { |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1012 target = value->GetContent(); |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1013 |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1014 // Store for reuse |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1015 index_.SetMetadata(publicId, metadata, target); |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1016 return true; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1017 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1018 else |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1019 { |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1020 // Should never happen |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1021 return false; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1022 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1023 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1024 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1025 else |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1026 { |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1027 // No backward |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1028 return index_.LookupMetadata(target, publicId, metadata); |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1029 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1030 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1031 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1032 |
2626 | 1033 void ServerContext::AddChildInstances(SetOfInstancesJob& job, |
1034 const std::string& publicId) | |
1035 { | |
1036 std::list<std::string> instances; | |
1037 GetIndex().GetChildInstances(instances, publicId); | |
1038 | |
1039 job.Reserve(job.GetInstancesCount() + instances.size()); | |
1040 | |
1041 for (std::list<std::string>::const_iterator | |
1042 it = instances.begin(); it != instances.end(); ++it) | |
1043 { | |
1044 job.AddInstance(*it); | |
1045 } | |
1046 } | |
2940
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refactoring access to Orthanc configuration
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diff
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|
1047 |
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diff
changeset
|
1048 |
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refactoring access to Orthanc configuration
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diff
changeset
|
1049 void ServerContext::SignalUpdatedModalities() |
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parents:
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diff
changeset
|
1050 { |
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refactoring access to Orthanc configuration
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parents:
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diff
changeset
|
1051 #if ORTHANC_ENABLE_PLUGINS == 1 |
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parents:
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diff
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|
1052 if (HasPlugins()) |
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refactoring access to Orthanc configuration
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diff
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|
1053 { |
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refactoring access to Orthanc configuration
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parents:
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diff
changeset
|
1054 GetPlugins().SignalUpdatedModalities(); |
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refactoring access to Orthanc configuration
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|
1055 } |
4767d36679ed
refactoring access to Orthanc configuration
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diff
changeset
|
1056 #endif |
4767d36679ed
refactoring access to Orthanc configuration
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diff
changeset
|
1057 } |
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refactoring access to Orthanc configuration
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diff
changeset
|
1058 |
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diff
changeset
|
1059 |
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refactoring access to Orthanc configuration
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diff
changeset
|
1060 void ServerContext::SignalUpdatedPeers() |
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|
1061 { |
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parents:
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changeset
|
1062 #if ORTHANC_ENABLE_PLUGINS == 1 |
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|
1063 if (HasPlugins()) |
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diff
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|
1064 { |
4767d36679ed
refactoring access to Orthanc configuration
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parents:
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diff
changeset
|
1065 GetPlugins().SignalUpdatedPeers(); |
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|
1066 } |
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diff
changeset
|
1067 #endif |
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refactoring access to Orthanc configuration
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|
1068 } |
3660
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IStorageCommitmentFactory
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diff
changeset
|
1069 |
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IStorageCommitmentFactory
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diff
changeset
|
1070 |
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1071 IStorageCommitmentFactory::ILookupHandler* |
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1072 ServerContext::CreateStorageCommitment(const std::string& jobId, |
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1073 const std::string& transactionUid, |
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1074 const std::vector<std::string>& sopClassUids, |
3662
d8371b4302ff
OrthancPluginRegisterStorageCommitmentScpCallback()
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diff
changeset
|
1075 const std::vector<std::string>& sopInstanceUids, |
d8371b4302ff
OrthancPluginRegisterStorageCommitmentScpCallback()
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diff
changeset
|
1076 const std::string& remoteAet, |
d8371b4302ff
OrthancPluginRegisterStorageCommitmentScpCallback()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1077 const std::string& calledAet) |
3660
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
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1078 { |
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IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
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1079 #if ORTHANC_ENABLE_PLUGINS == 1 |
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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1080 if (HasPlugins()) |
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
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1081 { |
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d8371b4302ff
OrthancPluginRegisterStorageCommitmentScpCallback()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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1082 return GetPlugins().CreateStorageCommitment( |
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OrthancPluginRegisterStorageCommitmentScpCallback()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3660
diff
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1083 jobId, transactionUid, sopClassUids, sopInstanceUids, remoteAet, calledAet); |
3660
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
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1084 } |
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
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1085 #endif |
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
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changeset
|
1086 |
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
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1087 return NULL; |
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
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1088 } |
224 | 1089 } |