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annotate OrthancServer/ServerContext.cpp @ 3003:5ae3ff2398e9

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refactoring OrthancFindRequestHandler using LookupResource::IVisitor
author Sebastien Jodogne <s.jodogne@gmail.com>
date Tue, 11 Dec 2018 19:02:51 +0100
parents 7695a9c81099
children 8265a6b56100
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
1900
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2018 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License as
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9 * published by the Free Software Foundation, either version 3 of the
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10 * License, or (at your option) any later version.
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11 *
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12 * In addition, as a special exception, the copyright holders of this
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13 * program give permission to link the code of its release with the
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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15 * that use the same license as the "OpenSSL" library), and distribute
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16 * the linked executables. You must obey the GNU General Public License
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17 * in all respects for all of the code used other than "OpenSSL". If you
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18 * modify file(s) with this exception, you may extend this exception to
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19 * your version of the file(s), but you are not obligated to do so. If
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20 * you do not wish to do so, delete this exception statement from your
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21 * version. If you delete this exception statement from all source files
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22 * in the program, then also delete it here.
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23 *
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24 * This program is distributed in the hope that it will be useful, but
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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27 * General Public License for more details.
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28 *
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29 * You should have received a copy of the GNU General Public License
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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31 **/
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32
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33
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34 #include "PrecompiledHeadersServer.h"
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35 #include "ServerContext.h"
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36
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37 #include "../Core/DicomParsing/FromDcmtkBridge.h"
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38 #include "../Core/FileStorage/StorageAccessor.h"
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39 #include "../Core/HttpServer/FilesystemHttpSender.h"
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40 #include "../Core/HttpServer/HttpStreamTranscoder.h"
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41 #include "../Core/Logging.h"
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42 #include "../Plugins/Engine/OrthancPlugins.h"
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43 #include "OrthancConfiguration.h"
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44 #include "OrthancRestApi/OrthancRestApi.h"
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45 #include "Search/LookupResource.h"
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46 #include "ServerJobs/OrthancJobUnserializer.h"
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47 #include "ServerToolbox.h"
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48
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49 #include <EmbeddedResources.h>
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50 #include <dcmtk/dcmdata/dcfilefo.h>
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51
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53
291
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54 #define ENABLE_DICOM_CACHE 1
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55
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56 static const size_t DICOM_CACHE_SIZE = 2;
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57
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58 /**
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59 * IMPORTANT: We make the assumption that the same instance of
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60 * FileStorage can be accessed from multiple threads. This seems OK
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61 * since the filesystem implements the required locking mechanisms,
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62 * but maybe a read-writer lock on the "FileStorage" could be
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63 * useful. Conversely, "ServerIndex" already implements mutex-based
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64 * locking.
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65 **/
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66
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67 namespace Orthanc
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68 {
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69 void ServerContext::ChangeThread(ServerContext* that,
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70 unsigned int sleepDelay)
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71 {
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72 while (!that->done_)
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73 {
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74 std::auto_ptr<IDynamicObject> obj(that->pendingChanges_.Dequeue(sleepDelay));
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75
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76 if (obj.get() != NULL)
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77 {
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78 const ServerIndexChange& change = dynamic_cast<const ServerIndexChange&>(*obj.get());
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79
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80 boost::recursive_mutex::scoped_lock lock(that->listenersMutex_);
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81 for (ServerListeners::iterator it = that->listeners_.begin();
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82 it != that->listeners_.end(); ++it)
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83 {
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84 try
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85 {
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86 try
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87 {
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88 it->GetListener().SignalChange(change);
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89 }
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90 catch (std::bad_alloc&)
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91 {
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92 LOG(ERROR) << "Not enough memory while signaling a change";
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93 }
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94 catch (...)
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95 {
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96 throw OrthancException(ErrorCode_InternalError);
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97 }
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98 }
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99 catch (OrthancException& e)
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100 {
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101 LOG(ERROR) << "Error in the " << it->GetDescription()
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102 << " callback while signaling a change: " << e.What()
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103 << " (code " << e.GetErrorCode() << ")";
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104 }
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105 }
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106 }
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107 }
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108 }
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109
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110
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111 void ServerContext::SaveJobsThread(ServerContext* that,
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112 unsigned int sleepDelay)
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113 {
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114 static const boost::posix_time::time_duration PERIODICITY =
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115 boost::posix_time::seconds(10);
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116
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117 boost::posix_time::ptime next =
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118 boost::posix_time::microsec_clock::universal_time() + PERIODICITY;
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119
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120 while (!that->done_)
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121 {
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122 boost::this_thread::sleep(boost::posix_time::milliseconds(sleepDelay));
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123
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124 if (that->haveJobsChanged_ ||
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125 boost::posix_time::microsec_clock::universal_time() >= next)
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126 {
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127 that->haveJobsChanged_ = false;
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128 that->SaveJobsEngine();
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129 next = boost::posix_time::microsec_clock::universal_time() + PERIODICITY;
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130 }
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131 }
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132 }
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133
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134
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135 void ServerContext::SignalJobSubmitted(const std::string& jobId)
8e0bc055d18c JobsRegistry::IObserver
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136 {
8e0bc055d18c JobsRegistry::IObserver
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137 haveJobsChanged_ = true;
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138 mainLua_.SignalJobSubmitted(jobId);
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139 }
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diff changeset
140
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diff changeset
141
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diff changeset
142 void ServerContext::SignalJobSuccess(const std::string& jobId)
8e0bc055d18c JobsRegistry::IObserver
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143 {
8e0bc055d18c JobsRegistry::IObserver
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144 haveJobsChanged_ = true;
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diff changeset
145 mainLua_.SignalJobSuccess(jobId);
2673
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146 }
2672
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147
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148
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diff changeset
149 void ServerContext::SignalJobFailure(const std::string& jobId)
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150 {
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151 haveJobsChanged_ = true;
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152 mainLua_.SignalJobFailure(jobId);
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153 }
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154
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155
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156 void ServerContext::SetupJobsEngine(bool unitTesting,
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157 bool loadJobsFromDatabase)
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158 {
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159 if (loadJobsFromDatabase)
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160 {
2671
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diff changeset
161 std::string serialized;
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diff changeset
162 if (index_.LookupGlobalProperty(serialized, GlobalProperty_JobsRegistry))
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diff changeset
163 {
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164 LOG(WARNING) << "Reloading the jobs from the last execution of Orthanc";
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165 OrthancJobUnserializer unserializer(*this);
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166
2671
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167 try
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168 {
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169 jobsEngine_.LoadRegistryFromString(unserializer, serialized);
2671
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170 }
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diff changeset
171 catch (OrthancException& e)
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172 {
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173 LOG(WARNING) << "Cannot unserialize the jobs engine, starting anyway: " << e.What();
2671
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174 }
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175 }
2671
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diff changeset
176 else
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177 {
2671
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178 LOG(INFO) << "The last execution of Orthanc has archived no job";
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179 }
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180 }
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181 else
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182 {
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183 LOG(INFO) << "Not reloading the jobs from the last execution of Orthanc";
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184 }
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185
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186 jobsEngine_.GetRegistry().SetObserver(*this);
2668
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187 jobsEngine_.Start();
2815
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188 isJobsEngineUnserialized_ = true;
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diff changeset
189
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190 saveJobsThread_ = boost::thread(SaveJobsThread, this, (unitTesting ? 20 : 100));
2668
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191 }
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diff changeset
192
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193
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194 void ServerContext::SaveJobsEngine()
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195 {
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196 VLOG(1) << "Serializing the content of the jobs engine";
2668
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197
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diff changeset
198 try
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199 {
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diff changeset
200 Json::Value value;
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201 jobsEngine_.GetRegistry().Serialize(value);
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diff changeset
202
d26dd081df97 saving jobs engine on exit
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diff changeset
203 Json::FastWriter writer;
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diff changeset
204 std::string serialized = writer.write(value);
d26dd081df97 saving jobs engine on exit
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diff changeset
205
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diff changeset
206 index_.SetGlobalProperty(GlobalProperty_JobsRegistry, serialized);
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diff changeset
207 }
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diff changeset
208 catch (OrthancException& e)
d26dd081df97 saving jobs engine on exit
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diff changeset
209 {
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diff changeset
210 LOG(ERROR) << "Cannot serialize the jobs engine: " << e.What();
d26dd081df97 saving jobs engine on exit
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diff changeset
211 }
d26dd081df97 saving jobs engine on exit
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diff changeset
212 }
d26dd081df97 saving jobs engine on exit
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diff changeset
213
d26dd081df97 saving jobs engine on exit
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diff changeset
214
1549
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diff changeset
215 ServerContext::ServerContext(IDatabaseWrapper& database,
2665
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diff changeset
216 IStorageArea& area,
2950
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diff changeset
217 bool unitTesting,
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diff changeset
218 size_t maxCompletedJobs) :
2665
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diff changeset
219 index_(*this, database, (unitTesting ? 20 : 500)),
1549
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diff changeset
220 area_(area),
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 409
diff changeset
221 compressionEnabled_(false),
1549
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diff changeset
222 storeMD5_(true),
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
223 provider_(*this),
995
8c67382f44a7 limit number of jobs in the scheduler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 942
diff changeset
224 dicomCache_(provider_, DICOM_CACHE_SIZE),
2738
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diff changeset
225 mainLua_(*this),
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diff changeset
226 filterLua_(*this),
3a55b77339ff fix deadlock in Lua scripts
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diff changeset
227 luaListener_(*this),
2950
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diff changeset
228 jobsEngine_(maxCompletedJobs),
2136
dd609a99d39a uniformization of the macro naming
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parents: 2135
diff changeset
229 #if ORTHANC_ENABLE_PLUGINS == 1
1232
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diff changeset
230 plugins_(NULL),
1632
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diff changeset
231 #endif
1436
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diff changeset
232 done_(false),
2673
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diff changeset
233 haveJobsChanged_(false),
2940
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diff changeset
234 isJobsEngineUnserialized_(false)
224
4eb0c7ce86c9 refactoring for store
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parents:
diff changeset
235 {
2940
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diff changeset
236 {
4767d36679ed refactoring access to Orthanc configuration
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diff changeset
237 OrthancConfiguration::ReaderLock lock;
2965
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diff changeset
238
2940
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diff changeset
239 queryRetrieveArchive_.reset(
4767d36679ed refactoring access to Orthanc configuration
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diff changeset
240 new SharedArchive(lock.GetConfiguration().GetUnsignedIntegerParameter("QueryRetrieveSize", 10)));
2965
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diff changeset
241 mediaArchive_.reset(
9c0b0a6d8b54 MediaArchiveSize configuration option
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diff changeset
242 new SharedArchive(lock.GetConfiguration().GetUnsignedIntegerParameter("MediaArchiveSize", 1)));
2940
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diff changeset
243 defaultLocalAet_ = lock.GetConfiguration().GetStringParameter("DicomAet", "ORTHANC");
4767d36679ed refactoring access to Orthanc configuration
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diff changeset
244 jobsEngine_.SetWorkersCount(lock.GetConfiguration().GetUnsignedIntegerParameter("ConcurrentJobs", 2));
4767d36679ed refactoring access to Orthanc configuration
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diff changeset
245 }
4767d36679ed refactoring access to Orthanc configuration
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diff changeset
246
2815
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diff changeset
247 jobsEngine_.SetThreadSleep(unitTesting ? 20 : 200);
1436
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diff changeset
248
2815
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diff changeset
249 listeners_.push_back(ServerListener(luaListener_, "Lua"));
2668
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diff changeset
250 changeThread_ = boost::thread(ChangeThread, this, (unitTesting ? 20 : 100));
224
4eb0c7ce86c9 refactoring for store
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parents:
diff changeset
251 }
4eb0c7ce86c9 refactoring for store
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parents:
diff changeset
252
1436
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diff changeset
253
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diff changeset
254
0a3e3be59094 uncoupling of SignalChange for Lua scripts
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diff changeset
255 ServerContext::~ServerContext()
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diff changeset
256 {
1453
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diff changeset
257 if (!done_)
c0bdc47165ef code to warn about possible threading problems
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diff changeset
258 {
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diff changeset
259 LOG(ERROR) << "INTERNAL ERROR: ServerContext::Stop() should be invoked manually to avoid mess in the destruction order!";
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diff changeset
260 Stop();
c0bdc47165ef code to warn about possible threading problems
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diff changeset
261 }
1447
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
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diff changeset
262 }
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1436
diff changeset
263
1436
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parents: 1434
diff changeset
264
1447
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
265 void ServerContext::Stop()
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
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parents: 1436
diff changeset
266 {
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
267 if (!done_)
1436
0a3e3be59094 uncoupling of SignalChange for Lua scripts
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1434
diff changeset
268 {
1459
040d58493998 security
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parents: 1456
diff changeset
269 {
040d58493998 security
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parents: 1456
diff changeset
270 boost::recursive_mutex::scoped_lock lock(listenersMutex_);
040d58493998 security
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diff changeset
271 listeners_.clear();
040d58493998 security
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parents: 1456
diff changeset
272 }
040d58493998 security
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parents: 1456
diff changeset
273
1447
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
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parents: 1436
diff changeset
274 done_ = true;
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diff changeset
275
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
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diff changeset
276 if (changeThread_.joinable())
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
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diff changeset
277 {
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
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diff changeset
278 changeThread_.join();
5ba7471780ae refactoring: HttpToolbox, DumpJson in Lua
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parents: 1436
diff changeset
279 }
1453
c0bdc47165ef code to warn about possible threading problems
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diff changeset
280
2672
3efc44fac209 periodically saving jobs
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
281 if (saveJobsThread_.joinable())
3efc44fac209 periodically saving jobs
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diff changeset
282 {
3efc44fac209 periodically saving jobs
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diff changeset
283 saveJobsThread_.join();
3efc44fac209 periodically saving jobs
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parents: 2671
diff changeset
284 }
3efc44fac209 periodically saving jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2671
diff changeset
285
2673
8e0bc055d18c JobsRegistry::IObserver
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parents: 2672
diff changeset
286 jobsEngine_.GetRegistry().ResetObserver();
2815
925d8dc03a23 unserialization of jobs from plugins
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parents: 2808
diff changeset
287
925d8dc03a23 unserialization of jobs from plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2808
diff changeset
288 if (isJobsEngineUnserialized_)
925d8dc03a23 unserialization of jobs from plugins
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parents: 2808
diff changeset
289 {
925d8dc03a23 unserialization of jobs from plugins
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290 // Avoid losing jobs if the JobsRegistry cannot be unserialized
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parents: 2808
diff changeset
291 SaveJobsEngine();
925d8dc03a23 unserialization of jobs from plugins
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parents: 2808
diff changeset
292 }
2668
d26dd081df97 saving jobs engine on exit
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parents: 2665
diff changeset
293
1453
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parents: 1447
diff changeset
294 // Do not change the order below!
2570
2e879c796ec7 JobsRegistry::SubmitAndWait(), StoreScuJob
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295 jobsEngine_.Stop();
1453
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
296 index_.Stop();
1436
0a3e3be59094 uncoupling of SignalChange for Lua scripts
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parents: 1434
diff changeset
297 }
0a3e3be59094 uncoupling of SignalChange for Lua scripts
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parents: 1434
diff changeset
298 }
0a3e3be59094 uncoupling of SignalChange for Lua scripts
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parents: 1434
diff changeset
299
0a3e3be59094 uncoupling of SignalChange for Lua scripts
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parents: 1434
diff changeset
300
236
6d9be2b470b4 compression
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parents: 233
diff changeset
301 void ServerContext::SetCompressionEnabled(bool enabled)
6d9be2b470b4 compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
302 {
6d9be2b470b4 compression
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parents: 233
diff changeset
303 if (enabled)
6d9be2b470b4 compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
304 LOG(WARNING) << "Disk compression is enabled";
6d9be2b470b4 compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
305 else
6d9be2b470b4 compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
306 LOG(WARNING) << "Disk compression is disabled";
6d9be2b470b4 compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
307
6d9be2b470b4 compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
308 compressionEnabled_ = enabled;
6d9be2b470b4 compression
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parents: 233
diff changeset
309 }
6d9be2b470b4 compression
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parents: 233
diff changeset
310
1549
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parents: 1548
diff changeset
311
1126
bf67431a7383 handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1124
diff changeset
312 void ServerContext::RemoveFile(const std::string& fileUuid,
bf67431a7383 handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1124
diff changeset
313 FileContentType type)
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
314 {
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
315 area_.Remove(fileUuid, type);
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
316 }
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
317
996
cf52f3bcb2b3 clarification of Lua classes wrt multithreading
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 995
diff changeset
318
1004
a226e0959d8b DicomInstanceToStore
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parents: 1002
diff changeset
319 StoreStatus ServerContext::Store(std::string& resultPublicId,
a226e0959d8b DicomInstanceToStore
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parents: 1002
diff changeset
320 DicomInstanceToStore& dicom)
a226e0959d8b DicomInstanceToStore
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parents: 1002
diff changeset
321 {
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
322 try
a226e0959d8b DicomInstanceToStore
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parents: 1002
diff changeset
323 {
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
324 StorageAccessor accessor(area_);
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
325
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2894
diff changeset
326 resultPublicId = dicom.GetHasher().HashInstance();
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
327
1574
0c29ebe80ac9 give access to full request origin in ReceivedInstanceFilter (Lua)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1550
diff changeset
328 Json::Value simplifiedTags;
2120
4b02ec79728a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
329 ServerToolbox::SimplifyTags(simplifiedTags, dicom.GetJson(), DicomToJsonFormat_Human);
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
330
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
331 // Test if the instance must be filtered out
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
332 bool accepted = true;
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
333
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
334 {
1456
68827c07e683 fix recursive calls with Lua
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1453
diff changeset
335 boost::recursive_mutex::scoped_lock lock(listenersMutex_);
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
336
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
337 for (ServerListeners::iterator it = listeners_.begin(); it != listeners_.end(); ++it)
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
338 {
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
339 try
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
340 {
1574
0c29ebe80ac9 give access to full request origin in ReceivedInstanceFilter (Lua)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1550
diff changeset
341 if (!it->GetListener().FilterIncomingInstance(dicom, simplifiedTags))
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
342 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
343 accepted = false;
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
344 break;
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
345 }
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
346 }
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
347 catch (OrthancException& e)
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
348 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
349 LOG(ERROR) << "Error in the " << it->GetDescription()
2135
cadfe0a2a393 fix in the sample basic plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2134
diff changeset
350 << " callback while receiving an instance: " << e.What()
cadfe0a2a393 fix in the sample basic plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2134
diff changeset
351 << " (code " << e.GetErrorCode() << ")";
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
352 throw;
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
353 }
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
354 }
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
355 }
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
356
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
357 if (!accepted)
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
358 {
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
359 LOG(INFO) << "An incoming instance has been discarded by the filter";
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
360 return StoreStatus_FilteredOut;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
361 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
362
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2815
diff changeset
363 {
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2815
diff changeset
364 // Remove the file from the DicomCache (useful if
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2815
diff changeset
365 // "OverwriteInstances" is set to "true")
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2815
diff changeset
366 boost::mutex::scoped_lock lock(dicomCacheMutex_);
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2815
diff changeset
367 dicomCache_.Invalidate(resultPublicId);
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2815
diff changeset
368 }
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2815
diff changeset
369
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
370 // TODO Should we use "gzip" instead?
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
371 CompressionType compression = (compressionEnabled_ ? CompressionType_ZlibWithSize : CompressionType_None);
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
372
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
373 FileInfo dicomInfo = accessor.Write(dicom.GetBufferData(), dicom.GetBufferSize(),
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
374 FileContentType_Dicom, compression, storeMD5_);
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
375 FileInfo jsonInfo = accessor.Write(dicom.GetJson().toStyledString(),
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
376 FileContentType_DicomAsJson, compression, storeMD5_);
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
377
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
378 ServerIndex::Attachments attachments;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
379 attachments.push_back(dicomInfo);
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
380 attachments.push_back(jsonInfo);
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
381
1067
ace99e272203 access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1066
diff changeset
382 typedef std::map<MetadataType, std::string> InstanceMetadata;
ace99e272203 access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1066
diff changeset
383 InstanceMetadata instanceMetadata;
1822
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1778
diff changeset
384 StoreStatus status = index_.Store(instanceMetadata, dicom, attachments);
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
385
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
386 // Only keep the metadata for the "instance" level
1067
ace99e272203 access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1066
diff changeset
387 dicom.GetMetadata().clear();
ace99e272203 access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1066
diff changeset
388
ace99e272203 access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1066
diff changeset
389 for (InstanceMetadata::const_iterator it = instanceMetadata.begin();
1304
7b6925b0890d cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
390 it != instanceMetadata.end(); ++it)
1067
ace99e272203 access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1066
diff changeset
391 {
ace99e272203 access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1066
diff changeset
392 dicom.GetMetadata().insert(std::make_pair(std::make_pair(ResourceType_Instance, it->first),
ace99e272203 access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1066
diff changeset
393 it->second));
ace99e272203 access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1066
diff changeset
394 }
ace99e272203 access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1066
diff changeset
395
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
396 if (status != StoreStatus_Success)
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
397 {
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
398 accessor.Remove(dicomInfo);
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
399 accessor.Remove(jsonInfo);
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
400 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
401
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
402 switch (status)
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
403 {
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
404 case StoreStatus_Success:
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
405 LOG(INFO) << "New instance stored";
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
406 break;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
407
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
408 case StoreStatus_AlreadyStored:
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
409 LOG(INFO) << "Already stored";
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
410 break;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
411
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
412 case StoreStatus_Failure:
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
413 LOG(ERROR) << "Store failure";
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
414 break;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
415
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
416 default:
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
417 // This should never happen
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
418 break;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
419 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
420
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
421 if (status == StoreStatus_Success ||
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
422 status == StoreStatus_AlreadyStored)
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
423 {
1456
68827c07e683 fix recursive calls with Lua
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1453
diff changeset
424 boost::recursive_mutex::scoped_lock lock(listenersMutex_);
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1447
diff changeset
425
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
426 for (ServerListeners::iterator it = listeners_.begin(); it != listeners_.end(); ++it)
1066
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
427 {
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
428 try
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
429 {
1574
0c29ebe80ac9 give access to full request origin in ReceivedInstanceFilter (Lua)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1550
diff changeset
430 it->GetListener().SignalStoredInstance(resultPublicId, dicom, simplifiedTags);
1066
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
431 }
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
432 catch (OrthancException& e)
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
433 {
1433
461e7554bff7 refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1427
diff changeset
434 LOG(ERROR) << "Error in the " << it->GetDescription()
2135
cadfe0a2a393 fix in the sample basic plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2134
diff changeset
435 << " callback while receiving an instance: " << e.What()
cadfe0a2a393 fix in the sample basic plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2134
diff changeset
436 << " (code " << e.GetErrorCode() << ")";
1066
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
437 }
bb82e5e818e9 OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1065
diff changeset
438 }
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
439 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
440
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
441 return status;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
442 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
443 catch (OrthancException& e)
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
444 {
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
445 if (e.GetErrorCode() == ErrorCode_InexistentTag)
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
446 {
2380
96b3ec054b69 reorganization in macros
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2304
diff changeset
447 dicom.GetSummary().LogMissingTagsForStore();
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
448 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
449
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
450 throw;
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
451 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
452 }
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
453
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
454
1146
200fcac0deb4 optimization for access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1145
diff changeset
455 void ServerContext::AnswerAttachment(RestApiOutput& output,
1700
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
456 const std::string& resourceId,
1146
200fcac0deb4 optimization for access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1145
diff changeset
457 FileContentType content)
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
458 {
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 227
diff changeset
459 FileInfo attachment;
1700
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
460 if (!index_.LookupAttachment(attachment, resourceId, content))
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 227
diff changeset
461 {
1700
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
462 throw OrthancException(ErrorCode_UnknownResource);
236
6d9be2b470b4 compression
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
463 }
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
464
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
465 StorageAccessor accessor(area_);
1772
53e045b5a8ec MIME content type can be associated to custom attachments (cf. "UserContentType")
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1758
diff changeset
466 accessor.AnswerFile(output, attachment, GetFileContentMime(content));
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
467 }
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
468
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
469
1700
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
470 void ServerContext::ChangeAttachmentCompression(const std::string& resourceId,
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
471 FileContentType attachmentType,
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
472 CompressionType compression)
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
473 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
474 LOG(INFO) << "Changing compression type for attachment "
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
475 << EnumerationToString(attachmentType)
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
476 << " of resource " << resourceId << " to "
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
477 << compression;
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
478
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
479 FileInfo attachment;
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
480 if (!index_.LookupAttachment(attachment, resourceId, attachmentType))
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
481 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
482 throw OrthancException(ErrorCode_UnknownResource);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
483 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
484
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
485 if (attachment.GetCompressionType() == compression)
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
486 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
487 // Nothing to do
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
488 return;
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
489 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
490
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
491 std::string content;
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
492
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
493 StorageAccessor accessor(area_);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
494 accessor.Read(content, attachment);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
495
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
496 FileInfo modified = accessor.Write(content.empty() ? NULL : content.c_str(),
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
497 content.size(), attachmentType, compression, storeMD5_);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
498
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
499 try
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
500 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
501 StoreStatus status = index_.AddAttachment(modified, resourceId);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
502 if (status != StoreStatus_Success)
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
503 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
504 accessor.Remove(modified);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
505 throw OrthancException(ErrorCode_Database);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
506 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
507 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
508 catch (OrthancException&)
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
509 {
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
510 accessor.Remove(modified);
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
511 throw;
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
512 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
513 }
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
514
f5ddbd9239dd New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1632
diff changeset
515
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
516 void ServerContext::ReadDicomAsJsonInternal(std::string& result,
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
517 const std::string& instancePublicId)
2127
bfa92c9328d7 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2124
diff changeset
518 {
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
519 FileInfo attachment;
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
520 if (index_.LookupAttachment(attachment, instancePublicId, FileContentType_DicomAsJson))
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
521 {
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
522 ReadAttachment(result, attachment);
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
523 }
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
524 else
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
525 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
526 // The "DICOM as JSON" summary is not available from the Orthanc
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
527 // store (most probably deleted), reconstruct it from the DICOM file
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
528 std::string dicom;
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
529 ReadDicom(dicom, instancePublicId);
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
530
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
531 LOG(INFO) << "Reconstructing the missing DICOM-as-JSON summary for instance: "
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
532 << instancePublicId;
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
533
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
534 ParsedDicomFile parsed(dicom);
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
535
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
536 Json::Value summary;
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
537 parsed.DatasetToJson(summary);
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
538
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
539 result = summary.toStyledString();
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
540
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
541 if (!AddAttachment(instancePublicId, FileContentType_DicomAsJson,
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
542 result.c_str(), result.size()))
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
543 {
2956
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2950
diff changeset
544 throw OrthancException(ErrorCode_InternalError,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2950
diff changeset
545 "Cannot associate the DICOM-as-JSON summary to instance: " + instancePublicId);
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
546 }
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
547 }
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
548 }
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
549
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
550
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
551 void ServerContext::ReadDicomAsJson(std::string& result,
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
552 const std::string& instancePublicId,
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
553 const std::set<DicomTag>& ignoreTagLength)
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
554 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
555 if (ignoreTagLength.empty())
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
556 {
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
557 ReadDicomAsJsonInternal(result, instancePublicId);
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
558 }
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
559 else
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
560 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
561 Json::Value tmp;
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
562 ReadDicomAsJson(tmp, instancePublicId, ignoreTagLength);
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
563 result = tmp.toStyledString();
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
564 }
2127
bfa92c9328d7 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2124
diff changeset
565 }
bfa92c9328d7 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2124
diff changeset
566
bfa92c9328d7 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2124
diff changeset
567
2124
2b1520efa282 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2122
diff changeset
568 void ServerContext::ReadDicomAsJson(Json::Value& result,
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
569 const std::string& instancePublicId,
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
570 const std::set<DicomTag>& ignoreTagLength)
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
571 {
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
572 if (ignoreTagLength.empty())
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
573 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
574 std::string tmp;
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
575 ReadDicomAsJsonInternal(tmp, instancePublicId);
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
576
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
577 Json::Reader reader;
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
578 if (!reader.parse(tmp, result))
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
579 {
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
580 throw OrthancException(ErrorCode_CorruptedFile);
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
581 }
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
582 }
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
583 else
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
584 {
2409
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
585 // The "DicomAsJson" attachment might have stored some tags as
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
586 // "too long". We are forced to re-parse the DICOM file.
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
587 std::string dicom;
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
588 ReadDicom(dicom, instancePublicId);
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
589
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
590 ParsedDicomFile parsed(dicom);
e4045b3c9772 ignore-length argument if retrieving DICOM tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
591 parsed.DatasetToJson(result, ignoreTagLength);
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
592 }
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
593 }
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
594
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
595
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
596 void ServerContext::ReadAttachment(std::string& result,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
597 const std::string& instancePublicId,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
598 FileContentType content,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
599 bool uncompressIfNeeded)
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
600 {
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 227
diff changeset
601 FileInfo attachment;
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 227
diff changeset
602 if (!index_.LookupAttachment(attachment, instancePublicId, content))
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
603 {
2956
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2950
diff changeset
604 throw OrthancException(ErrorCode_InternalError,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2950
diff changeset
605 "Unable to read attachment " + EnumerationToString(content) +
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2950
diff changeset
606 " of instance " + instancePublicId);
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
607 }
1550
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
608
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
609 if (uncompressIfNeeded)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
610 {
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
611 ReadAttachment(result, attachment);
1550
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
612 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
613 else
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
614 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
615 // Do not interpret the content of the storage area, return the
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
616 // raw data
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
617 area_.Read(result, attachment.GetUuid(), content);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1549
diff changeset
618 }
227
209ca3f6db62 dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
619 }
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
620
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
621
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
622 void ServerContext::ReadAttachment(std::string& result,
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
623 const FileInfo& attachment)
1778
776573e592da create media refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1772
diff changeset
624 {
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
625 // This will decompress the attachment
1778
776573e592da create media refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1772
diff changeset
626 StorageAccessor accessor(area_);
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2127
diff changeset
627 accessor.Read(result, attachment);
1778
776573e592da create media refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1772
diff changeset
628 }
776573e592da create media refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1772
diff changeset
629
776573e592da create media refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1772
diff changeset
630
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
631 IDynamicObject* ServerContext::DicomCacheProvider::Provide(const std::string& instancePublicId)
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
632 {
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
633 std::string content;
2124
2b1520efa282 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2122
diff changeset
634 context_.ReadDicom(content, instancePublicId);
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
635 return new ParsedDicomFile(content);
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
636 }
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
637
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
638
778
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
639 ServerContext::DicomCacheLocker::DicomCacheLocker(ServerContext& that,
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
640 const std::string& instancePublicId) :
1129
8dabdc0d3007 fix possible deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1126
diff changeset
641 that_(that),
8dabdc0d3007 fix possible deadlock
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1126
diff changeset
642 lock_(that_.dicomCacheMutex_)
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
643 {
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 288
diff changeset
644 #if ENABLE_DICOM_CACHE == 0
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 288
diff changeset
645 static std::auto_ptr<IDynamicObject> p;
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 288
diff changeset
646 p.reset(provider_.Provide(instancePublicId));
778
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
647 dicom_ = dynamic_cast<ParsedDicomFile*>(p.get());
291
4d7469f72a0b embedding of dicom dictionaries
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 288
diff changeset
648 #else
778
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
649 dicom_ = &dynamic_cast<ParsedDicomFile&>(that_.dicomCache_.Access(instancePublicId));
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
650 #endif
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
651 }
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
652
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
653
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
654 ServerContext::DicomCacheLocker::~DicomCacheLocker()
aebf0071020e refactoring of the mutex for the dicom cache
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 774
diff changeset
655 {
285
4031f73fe0e4 access to the raw dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
656 }
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
657
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 291
diff changeset
658
695
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
659 void ServerContext::SetStoreMD5ForAttachments(bool storeMD5)
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
660 {
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
661 LOG(INFO) << "Storing MD5 for attachments: " << (storeMD5 ? "yes" : "no");
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
662 storeMD5_ = storeMD5;
695
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
663 }
c59bc408fb10 parameter to disable the computation of the MD5
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
664
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
665
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
666 bool ServerContext::AddAttachment(const std::string& resourceId,
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
667 FileContentType attachmentType,
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
668 const void* data,
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
669 size_t size)
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
670 {
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
671 LOG(INFO) << "Adding attachment " << EnumerationToString(attachmentType) << " to resource " << resourceId;
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
672
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
673 // TODO Should we use "gzip" instead?
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
674 CompressionType compression = (compressionEnabled_ ? CompressionType_ZlibWithSize : CompressionType_None);
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
675
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
676 StorageAccessor accessor(area_);
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
677 FileInfo attachment = accessor.Write(data, size, attachmentType, compression, storeMD5_);
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
678
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
679 StoreStatus status = index_.AddAttachment(attachment, resourceId);
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
680 if (status != StoreStatus_Success)
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
681 {
1549
e5e975e9b738 refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1548
diff changeset
682 accessor.Remove(attachment);
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
683 return false;
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
684 }
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
685 else
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
686 {
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
687 return true;
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
688 }
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
689 }
1145
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
690
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
691
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
692 bool ServerContext::DeleteResource(Json::Value& target,
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
693 const std::string& uuid,
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
694 ResourceType expectedType)
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
695 {
2507
99116ed6f38c invalidate DicomCache when deleting instance
amazy
parents: 2447
diff changeset
696 if (expectedType == ResourceType_Instance)
99116ed6f38c invalidate DicomCache when deleting instance
amazy
parents: 2447
diff changeset
697 {
99116ed6f38c invalidate DicomCache when deleting instance
amazy
parents: 2447
diff changeset
698 // remove the file from the DicomCache
99116ed6f38c invalidate DicomCache when deleting instance
amazy
parents: 2447
diff changeset
699 boost::mutex::scoped_lock lock(dicomCacheMutex_);
99116ed6f38c invalidate DicomCache when deleting instance
amazy
parents: 2447
diff changeset
700 dicomCache_.Invalidate(uuid);
99116ed6f38c invalidate DicomCache when deleting instance
amazy
parents: 2447
diff changeset
701 }
99116ed6f38c invalidate DicomCache when deleting instance
amazy
parents: 2447
diff changeset
702
1145
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
703 return index_.DeleteResource(target, uuid, expectedType);
0479d02c6778 Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1134
diff changeset
704 }
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1165
diff changeset
705
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1165
diff changeset
706
1198
1169528a9a5f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
707 void ServerContext::SignalChange(const ServerIndexChange& change)
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1165
diff changeset
708 {
1436
0a3e3be59094 uncoupling of SignalChange for Lua scripts
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1434
diff changeset
709 pendingChanges_.Enqueue(change.Clone());
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1165
diff changeset
710 }
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
711
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
712
2136
dd609a99d39a uniformization of the macro naming
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2135
diff changeset
713 #if ORTHANC_ENABLE_PLUGINS == 1
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
714 void ServerContext::SetPlugins(OrthancPlugins& plugins)
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
715 {
1459
040d58493998 security
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1456
diff changeset
716 boost::recursive_mutex::scoped_lock lock(listenersMutex_);
040d58493998 security
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1456
diff changeset
717
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
718 plugins_ = &plugins;
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
719
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
720 // TODO REFACTOR THIS
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
721 listeners_.clear();
2738
3a55b77339ff fix deadlock in Lua scripts
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2716
diff changeset
722 listeners_.push_back(ServerListener(luaListener_, "Lua"));
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
723 listeners_.push_back(ServerListener(plugins, "plugin"));
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
724 }
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
725
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
726
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
727 void ServerContext::ResetPlugins()
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
728 {
1459
040d58493998 security
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1456
diff changeset
729 boost::recursive_mutex::scoped_lock lock(listenersMutex_);
040d58493998 security
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1456
diff changeset
730
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
731 plugins_ = NULL;
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
732
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
733 // TODO REFACTOR THIS
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
734 listeners_.clear();
2738
3a55b77339ff fix deadlock in Lua scripts
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2716
diff changeset
735 listeners_.push_back(ServerListener(luaListener_, "Lua"));
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
736 }
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
737
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
738
1434
f9cd40166269 refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1433
diff changeset
739 const OrthancPlugins& ServerContext::GetPlugins() const
1232
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
740 {
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
741 if (HasPlugins())
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
742 {
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
743 return *plugins_;
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
744 }
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
745 else
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
746 {
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
747 throw OrthancException(ErrorCode_InternalError);
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
748 }
f1c01451a8ee Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
749 }
1632
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
750
1741
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
751 OrthancPlugins& ServerContext::GetPlugins()
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
752 {
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
753 if (HasPlugins())
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
754 {
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
755 return *plugins_;
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
756 }
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
757 else
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
758 {
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
759 throw OrthancException(ErrorCode_InternalError);
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
760 }
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
761 }
06addfcd1d4c OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
762
1632
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
763 #endif
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
764
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
765
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
766 bool ServerContext::HasPlugins() const
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
767 {
2136
dd609a99d39a uniformization of the macro naming
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2135
diff changeset
768 #if ORTHANC_ENABLE_PLUGINS == 1
1632
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
769 return (plugins_ != NULL);
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
770 #else
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
771 return false;
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
772 #endif
eb8fbcf008b5 fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1582
diff changeset
773 }
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
774
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
775
3001
7695a9c81099 refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2965
diff changeset
776 void ServerContext::Apply(LookupResource::IVisitor& visitor,
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
777 const ::Orthanc::LookupResource& lookup,
2304
563bf878407a Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
778 size_t since,
563bf878407a Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
779 size_t limit)
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
780 {
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
781 std::vector<std::string> resources, instances;
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
782 GetIndex().FindCandidates(resources, instances, lookup);
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
783
3003
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
784 LOG(INFO) << "Number of candidate resources after fast DB filtering: " << resources.size();
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
785
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
786 assert(resources.size() == instances.size());
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
787
3001
7695a9c81099 refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2965
diff changeset
788 size_t countResults = 0;
2304
563bf878407a Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
789 size_t skipped = 0;
3003
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
790 bool complete = true;
3001
7695a9c81099 refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2965
diff changeset
791
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
792 for (size_t i = 0; i < instances.size(); i++)
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
793 {
2876
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
794 // TODO - Don't read the full JSON from the disk if only "main
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
795 // DICOM tags" are to be returned
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
796 Json::Value dicom;
2124
2b1520efa282 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2122
diff changeset
797 ReadDicomAsJson(dicom, instances[i]);
1757
98abb8d7f905 ServerContext::Apply lookup
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parents: 1741
diff changeset
798
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
799 if (lookup.IsMatch(dicom))
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
800 {
2304
563bf878407a Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
801 if (skipped < since)
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
802 {
2304
563bf878407a Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
803 skipped++;
563bf878407a Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
804 }
563bf878407a Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
805 else if (limit != 0 &&
3001
7695a9c81099 refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2965
diff changeset
806 countResults >= limit)
2304
563bf878407a Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
807 {
3003
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
808 // Too many results, don't mark as complete
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
809 complete = false;
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
810 break;
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
811 }
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
812 else
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
813 {
3003
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
814 visitor.Visit(resources[i], instances[i], dicom);
3001
7695a9c81099 refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2965
diff changeset
815 countResults ++;
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
816 }
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
817 }
98abb8d7f905 ServerContext::Apply lookup
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parents: 1741
diff changeset
818 }
3001
7695a9c81099 refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2965
diff changeset
819
3003
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
820 if (complete)
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
821 {
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
822 visitor.MarkAsComplete();
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
823 }
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
824
5ae3ff2398e9 refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3001
diff changeset
825 LOG(INFO) << "Number of matching resources: " << countResults;
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
826 }
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1741
diff changeset
827
2626
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
828
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
829 void ServerContext::AddChildInstances(SetOfInstancesJob& job,
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
830 const std::string& publicId)
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
831 {
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
832 std::list<std::string> instances;
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
833 GetIndex().GetChildInstances(instances, publicId);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
834
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
835 job.Reserve(job.GetInstancesCount() + instances.size());
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
836
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
837 for (std::list<std::string>::const_iterator
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
838 it = instances.begin(); it != instances.end(); ++it)
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
839 {
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
840 job.AddInstance(*it);
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
841 }
e09021ddc00d cleanup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2617
diff changeset
842 }
2940
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
843
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
844
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
845 void ServerContext::SignalUpdatedModalities()
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
846 {
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
847 #if ORTHANC_ENABLE_PLUGINS == 1
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
848 if (HasPlugins())
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
849 {
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
850 GetPlugins().SignalUpdatedModalities();
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
851 }
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
852 #endif
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
853 }
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
854
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
855
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
856 void ServerContext::SignalUpdatedPeers()
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
857 {
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
858 #if ORTHANC_ENABLE_PLUGINS == 1
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
859 if (HasPlugins())
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
860 {
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
861 GetPlugins().SignalUpdatedPeers();
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
862 }
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
863 #endif
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2925
diff changeset
864 }
224
4eb0c7ce86c9 refactoring for store
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
865 }