Mercurial > hg > orthanc

annotate OrthancServer/ServerIndex.cpp @ 2109:d5c29fd74ffa

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OrthancPlugins::CheckMinimalOrthancVersion
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 26 Oct 2016 13:32:02 +0200
parents 1824a02e0951
children 4b02ec79728a
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
1900
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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32
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33 #include "PrecompiledHeadersServer.h"
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34 #include "ServerIndex.h"
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35
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36 #ifndef NOMINMAX
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37 #define NOMINMAX
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38 #endif
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39
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40 #include "ServerIndexChange.h"
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41 #include "EmbeddedResources.h"
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42 #include "OrthancInitialization.h"
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43 #include "ServerToolbox.h"
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44 #include "../Core/Toolbox.h"
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45 #include "../Core/Logging.h"
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46 #include "../Core/Uuid.h"
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47 #include "../Core/DicomFormat/DicomArray.h"
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48 #include "Search/LookupIdentifierQuery.h"
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49 #include "Search/LookupResource.h"
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50
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51 #include "FromDcmtkBridge.h"
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52 #include "ServerContext.h"
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53 #include "DicomInstanceToStore.h"
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55 #include <boost/lexical_cast.hpp>
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56 #include <stdio.h>
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57
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58 static const uint64_t MEGA_BYTES = 1024 * 1024;
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59
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60 namespace Orthanc
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61 {
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62 class ServerIndex::Listener : public IDatabaseListener
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63 {
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64 private:
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65 struct FileToRemove
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66 {
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67 private:
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68 std::string uuid_;
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69 FileContentType type_;
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71 public:
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72 FileToRemove(const FileInfo& info) : uuid_(info.GetUuid()),
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73 type_(info.GetContentType())
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74 {
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75 }
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77 const std::string& GetUuid() const
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78 {
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79 return uuid_;
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80 }
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81
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82 FileContentType GetContentType() const
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83 {
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84 return type_;
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85 }
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86 };
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87
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88 ServerContext& context_;
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89 bool hasRemainingLevel_;
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90 ResourceType remainingType_;
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91 std::string remainingPublicId_;
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92 std::list<FileToRemove> pendingFilesToRemove_;
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93 std::list<ServerIndexChange> pendingChanges_;
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94 uint64_t sizeOfFilesToRemove_;
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95 bool insideTransaction_;
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96
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97 void Reset()
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98 {
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99 sizeOfFilesToRemove_ = 0;
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100 hasRemainingLevel_ = false;
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101 pendingFilesToRemove_.clear();
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102 pendingChanges_.clear();
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103 }
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104
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105 public:
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106 Listener(ServerContext& context) : context_(context),
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107 insideTransaction_(false)
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108 {
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109 Reset();
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110 assert(ResourceType_Patient < ResourceType_Study &&
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111 ResourceType_Study < ResourceType_Series &&
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112 ResourceType_Series < ResourceType_Instance);
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113 }
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114
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115 void StartTransaction()
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116 {
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117 Reset();
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118 insideTransaction_ = true;
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119 }
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120
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121 void EndTransaction()
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122 {
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123 insideTransaction_ = false;
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124 }
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125
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126 uint64_t GetSizeOfFilesToRemove()
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127 {
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128 return sizeOfFilesToRemove_;
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129 }
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130
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131 void CommitFilesToRemove()
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132 {
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133 for (std::list<FileToRemove>::const_iterator
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134 it = pendingFilesToRemove_.begin();
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135 it != pendingFilesToRemove_.end(); ++it)
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136 {
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137 context_.RemoveFile(it->GetUuid(), it->GetContentType());
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138 }
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139 }
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140
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141 void CommitChanges()
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142 {
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143 for (std::list<ServerIndexChange>::const_iterator
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144 it = pendingChanges_.begin();
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145 it != pendingChanges_.end(); ++it)
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146 {
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147 context_.SignalChange(*it);
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148 }
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149 }
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150
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151 virtual void SignalRemainingAncestor(ResourceType parentType,
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152 const std::string& publicId)
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153 {
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154 VLOG(1) << "Remaining ancestor \"" << publicId << "\" (" << parentType << ")";
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155
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156 if (hasRemainingLevel_)
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157 {
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158 if (parentType < remainingType_)
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159 {
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160 remainingType_ = parentType;
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161 remainingPublicId_ = publicId;
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162 }
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163 }
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164 else
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165 {
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166 hasRemainingLevel_ = true;
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167 remainingType_ = parentType;
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168 remainingPublicId_ = publicId;
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169 }
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170 }
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171
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172 virtual void SignalFileDeleted(const FileInfo& info)
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173 {
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174 assert(Toolbox::IsUuid(info.GetUuid()));
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175 pendingFilesToRemove_.push_back(FileToRemove(info));
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176 sizeOfFilesToRemove_ += info.GetCompressedSize();
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177 }
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178
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179 virtual void SignalChange(const ServerIndexChange& change)
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180 {
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181 VLOG(1) << "Change related to resource " << change.GetPublicId() << " of type "
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182 << EnumerationToString(change.GetResourceType()) << ": "
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183 << EnumerationToString(change.GetChangeType());
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184
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185 if (insideTransaction_)
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186 {
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187 pendingChanges_.push_back(change);
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188 }
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189 else
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190 {
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191 context_.SignalChange(change);
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192 }
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193 }
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194
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195 bool HasRemainingLevel() const
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196 {
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197 return hasRemainingLevel_;
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198 }
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199
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200 ResourceType GetRemainingType() const
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201 {
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202 assert(HasRemainingLevel());
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203 return remainingType_;
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204 }
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205
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206 const std::string& GetRemainingPublicId() const
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207 {
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208 assert(HasRemainingLevel());
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209 return remainingPublicId_;
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210 }
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211 };
0
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212
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213
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214 class ServerIndex::Transaction
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215 {
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216 private:
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217 ServerIndex& index_;
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218 std::auto_ptr<SQLite::ITransaction> transaction_;
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219 bool isCommitted_;
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220
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221 public:
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222 Transaction(ServerIndex& index) :
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223 index_(index),
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224 isCommitted_(false)
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225 {
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226 transaction_.reset(index_.db_.StartTransaction());
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227 transaction_->Begin();
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228
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229 assert(index_.currentStorageSize_ == index_.db_.GetTotalCompressedSize());
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230
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231 index_.listener_->StartTransaction();
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232 }
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233
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234 ~Transaction()
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235 {
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236 index_.listener_->EndTransaction();
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237
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238 if (!isCommitted_)
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239 {
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240 transaction_->Rollback();
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241 }
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242 }
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243
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244 void Commit(uint64_t sizeOfAddedFiles)
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245 {
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246 if (!isCommitted_)
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247 {
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248 transaction_->Commit();
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249
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250 // We can remove the files once the SQLite transaction has
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251 // been successfully committed. Some files might have to be
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252 // deleted because of recycling.
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253 index_.listener_->CommitFilesToRemove();
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254
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255 index_.currentStorageSize_ += sizeOfAddedFiles;
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256
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257 assert(index_.currentStorageSize_ >= index_.listener_->GetSizeOfFilesToRemove());
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258 index_.currentStorageSize_ -= index_.listener_->GetSizeOfFilesToRemove();
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259
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260 // Send all the pending changes to the Orthanc plugins
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261 index_.listener_->CommitChanges();
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262
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263 isCommitted_ = true;
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264 }
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265 }
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266 };
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267
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268
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269 class ServerIndex::UnstableResourcePayload
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270 {
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271 private:
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272 ResourceType type_;
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273 std::string publicId_;
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274 boost::posix_time::ptime time_;
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275
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276 public:
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277 UnstableResourcePayload() : type_(ResourceType_Instance)
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278 {
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279 }
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280
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281 UnstableResourcePayload(Orthanc::ResourceType type,
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282 const std::string& publicId) :
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283 type_(type),
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284 publicId_(publicId)
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285 {
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286 time_ = boost::posix_time::second_clock::local_time();
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287 }
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288
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289 unsigned int GetAge() const
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290 {
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291 return (boost::posix_time::second_clock::local_time() - time_).total_seconds();
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292 }
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293
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294 ResourceType GetResourceType() const
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295 {
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296 return type_;
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297 }
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298
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299 const std::string& GetPublicId() const
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300 {
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301 return publicId_;
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302 }
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303 };
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304
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305
212
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306 bool ServerIndex::DeleteResource(Json::Value& target,
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307 const std::string& uuid,
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308 ResourceType expectedType)
0
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309 {
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310 boost::mutex::scoped_lock lock(mutex_);
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311
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312 Transaction t(*this);
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313
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314 int64_t id;
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315 ResourceType type;
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316 if (!db_.LookupResource(id, type, uuid) ||
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317 expectedType != type)
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318 {
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319 return false;
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320 }
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321
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322 db_.DeleteResource(id);
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323
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324 if (listener_->HasRemainingLevel())
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325 {
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326 ResourceType type = listener_->GetRemainingType();
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327 const std::string& uuid = listener_->GetRemainingPublicId();
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328
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329 target["RemainingAncestor"] = Json::Value(Json::objectValue);
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330 target["RemainingAncestor"]["Path"] = GetBasePath(type, uuid);
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331 target["RemainingAncestor"]["Type"] = EnumerationToString(type);
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332 target["RemainingAncestor"]["ID"] = uuid;
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333 }
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334 else
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335 {
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336 target["RemainingAncestor"] = Json::nullValue;
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337 }
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338
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339 t.Commit(0);
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340
0
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341 return true;
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342 }
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343
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344
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345 void ServerIndex::FlushThread(ServerIndex* that)
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346 {
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347 // By default, wait for 10 seconds before flushing
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348 unsigned int sleep = 10;
511
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349
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350 try
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351 {
744
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352 boost::mutex::scoped_lock lock(that->mutex_);
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353 std::string sleepString;
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354
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355 if (that->db_.LookupGlobalProperty(sleepString, GlobalProperty_FlushSleep) &&
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356 Toolbox::IsInteger(sleepString))
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357 {
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358 sleep = boost::lexical_cast<unsigned int>(sleepString);
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359 }
511
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360 }
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361 catch (boost::bad_lexical_cast&)
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362 {
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363 }
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364
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365 LOG(INFO) << "Starting the database flushing thread (sleep = " << sleep << ")";
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366
511
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367 unsigned int count = 0;
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368
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369 while (!that->done_)
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370 {
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371 boost::this_thread::sleep(boost::posix_time::seconds(1));
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372 count++;
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373 if (count < sleep)
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374 {
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375 continue;
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376 }
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377
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378 boost::mutex::scoped_lock lock(that->mutex_);
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379 that->db_.FlushToDisk();
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380 count = 0;
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381 }
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382
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383 LOG(INFO) << "Stopping the database flushing thread";
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384 }
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385
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386
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387 static void ComputeExpectedNumberOfInstances(IDatabaseWrapper& db,
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388 int64_t series,
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389 const DicomMap& dicomSummary)
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390 {
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391 try
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392 {
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393 const DicomValue* value;
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394 const DicomValue* value2;
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395
433
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396 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGES_IN_ACQUISITION)) != NULL &&
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397 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS)) != NULL)
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398 {
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399 // Patch for series with temporal positions thanks to Will Ryder
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400 int64_t imagesInAcquisition = boost::lexical_cast<int64_t>(value->GetContent());
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401 int64_t countTemporalPositions = boost::lexical_cast<int64_t>(value2->GetContent());
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402 std::string expected = boost::lexical_cast<std::string>(imagesInAcquisition * countTemporalPositions);
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403 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected);
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404 }
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diff changeset
405
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406 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_SLICES)) != NULL &&
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407 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TIME_SLICES)) != NULL)
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408 {
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409 // Support of Cardio-PET images
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diff changeset
410 int64_t numberOfSlices = boost::lexical_cast<int64_t>(value->GetContent());
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411 int64_t numberOfTimeSlices = boost::lexical_cast<int64_t>(value2->GetContent());
433
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diff changeset
412 std::string expected = boost::lexical_cast<std::string>(numberOfSlices * numberOfTimeSlices);
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diff changeset
413 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected);
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diff changeset
414 }
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parents: 432
diff changeset
415
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diff changeset
416 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)) != NULL)
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parents: 432
diff changeset
417 {
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418 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, value->GetContent());
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
419 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
420 }
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
421 catch (OrthancException&)
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
422 {
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
423 }
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
424 catch (boost::bad_lexical_cast&)
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
425 {
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
426 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
427 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
428
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
429
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
430
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
431
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
432 bool ServerIndex::GetMetadataAsInteger(int64_t& result,
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
433 int64_t id,
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
434 MetadataType type)
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
435 {
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
436 std::string s;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
437 if (!db_.LookupMetadata(s, id, type))
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
438 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
439 return false;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
440 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
441
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
442 try
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
443 {
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
444 result = boost::lexical_cast<int64_t>(s);
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
445 return true;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
446 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
447 catch (boost::bad_lexical_cast&)
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
448 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
449 return false;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
450 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
451 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
452
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
453
1297
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
454 void ServerIndex::LogChange(int64_t internalId,
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
455 ChangeType changeType,
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
456 ResourceType resourceType,
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
457 const std::string& publicId)
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
458 {
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
459 ServerIndexChange change(changeType, resourceType, publicId);
1300
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
460
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
461 if (changeType <= ChangeType_INTERNAL_LastLogged)
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
462 {
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
463 db_.LogChange(internalId, change);
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
464 }
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
465
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
466 assert(listener_.get() != NULL);
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
467 listener_->SignalChange(change);
1297
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
468 }
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
469
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
470
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
471 uint64_t ServerIndex::IncrementGlobalSequenceInternal(GlobalProperty property)
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
472 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
473 std::string oldValue;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
474
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
475 if (db_.LookupGlobalProperty(oldValue, property))
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
476 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
477 uint64_t oldNumber;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
478
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
479 try
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
480 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
481 oldNumber = boost::lexical_cast<uint64_t>(oldValue);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
482 db_.SetGlobalProperty(property, boost::lexical_cast<std::string>(oldNumber + 1));
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
483 return oldNumber + 1;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
484 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
485 catch (boost::bad_lexical_cast&)
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
486 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
487 throw OrthancException(ErrorCode_InternalError);
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
488 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
489 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
490 else
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
491 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
492 // Initialize the sequence at "1"
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
493 db_.SetGlobalProperty(property, "1");
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
494 return 1;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
495 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
496 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
497
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
498
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
499
1299
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
500 int64_t ServerIndex::CreateResource(const std::string& publicId,
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
501 ResourceType type)
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
502 {
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
503 int64_t id = db_.CreateResource(publicId, type);
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
504
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
505 ChangeType changeType;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
506 switch (type)
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
507 {
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
508 case ResourceType_Patient:
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
509 changeType = ChangeType_NewPatient;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
510 break;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
511
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
512 case ResourceType_Study:
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
513 changeType = ChangeType_NewStudy;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
514 break;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
515
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
516 case ResourceType_Series:
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
517 changeType = ChangeType_NewSeries;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
518 break;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
519
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
520 case ResourceType_Instance:
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
521 changeType = ChangeType_NewInstance;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
522 break;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
523
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
524 default:
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
525 throw OrthancException(ErrorCode_InternalError);
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
526 }
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
527
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
528 ServerIndexChange change(changeType, type, publicId);
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
529 db_.LogChange(id, change);
1300
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
530
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
531 assert(listener_.get() != NULL);
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
532 listener_->SignalChange(change);
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
533
1299
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
534 return id;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
535 }
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
536
1286
b4acdb37e43b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1271
diff changeset
537
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
538 ServerIndex::ServerIndex(ServerContext& context,
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
539 IDatabaseWrapper& db) :
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
540 done_(false),
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
541 db_(db),
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
542 maximumStorageSize_(0),
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
543 maximumPatients_(0)
186
f68c039b0571 preparing refactoring of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 180
diff changeset
544 {
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
545 listener_.reset(new Listener(context));
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
546 db_.SetListener(*listener_);
180
626777d01dc4 use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 179
diff changeset
547
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
548 currentStorageSize_ = db_.GetTotalCompressedSize();
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
549
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
550 // Initial recycling if the parameters have changed since the last
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
551 // execution of Orthanc
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
552 StandaloneRecycling();
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
553
1306
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
554 if (db.HasFlushToDisk())
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
555 {
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
556 flushThread_ = boost::thread(FlushThread, this);
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
557 }
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
558
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
559 unstableResourcesMonitorThread_ = boost::thread(UnstableResourcesMonitorThread, this);
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
560 }
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
561
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
562
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
563
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
564 ServerIndex::~ServerIndex()
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
565 {
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
566 if (!done_)
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
567 {
1453
c0bdc47165ef code to warn about possible threading problems
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parents: 1432
diff changeset
568 LOG(ERROR) << "INTERNAL ERROR: ServerIndex::Stop() should be invoked manually to avoid mess in the destruction order!";
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
569 Stop();
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
570 }
0
3959d33612cc initial commit
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parents:
diff changeset
571 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
572
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
573
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
574
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
575 void ServerIndex::Stop()
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
576 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
577 if (!done_)
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
578 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
579 done_ = true;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
580
c0bdc47165ef code to warn about possible threading problems
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parents: 1432
diff changeset
581 if (db_.HasFlushToDisk() &&
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
582 flushThread_.joinable())
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
583 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
584 flushThread_.join();
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
585 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
586
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
587 if (unstableResourcesMonitorThread_.joinable())
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
588 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
589 unstableResourcesMonitorThread_.join();
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
590 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
591 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
592 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
593
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
594
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
595
1006
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parents: 1004
diff changeset
596 StoreStatus ServerIndex::Store(std::map<MetadataType, std::string>& instanceMetadata,
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9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
597 DicomInstanceToStore& instanceToStore,
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
598 const Attachments& attachments)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
599 {
206
4453a010d0db flush to disk thread
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parents: 205
diff changeset
600 boost::mutex::scoped_lock lock(mutex_);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
601
1822
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parents: 1773
diff changeset
602 const DicomMap& dicomSummary = instanceToStore.GetSummary();
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
603 const ServerIndex::MetadataMap& metadata = instanceToStore.GetMetadata();
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
604
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
605 instanceMetadata.clear();
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parents: 1004
diff changeset
606
1822
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parents: 1773
diff changeset
607 DicomInstanceHasher hasher(instanceToStore.GetSummary());
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
608
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
609 try
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
610 {
278
771f12042be9 more efficient determination of storage size for recycling
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parents: 273
diff changeset
611 Transaction t(*this);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
612
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parents: 201
diff changeset
613 // Do nothing if the instance already exists
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3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
614 {
432
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parents: 431
diff changeset
615 ResourceType type;
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parents: 431
diff changeset
616 int64_t tmp;
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parents: 1288
diff changeset
617 if (db_.LookupResource(tmp, type, hasher.HashInstance()))
432
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parents: 431
diff changeset
618 {
2b09d4ee86c6 refactoring
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parents: 431
diff changeset
619 assert(type == ResourceType_Instance);
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parents: 1246
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620 db_.GetAllMetadata(instanceMetadata, tmp);
432
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parents: 431
diff changeset
621 return StoreStatus_AlreadyStored;
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parents: 431
diff changeset
622 }
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parents:
diff changeset
623 }
3959d33612cc initial commit
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parents:
diff changeset
624
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625 // Ensure there is enough room in the storage for the new instance
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parents: 264
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626 uint64_t instanceSize = 0;
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parents: 264
diff changeset
627 for (Attachments::const_iterator it = attachments.begin();
656
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parents: 646
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628 it != attachments.end(); ++it)
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parents: 264
diff changeset
629 {
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parents: 264
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630 instanceSize += it->GetCompressedSize();
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parents: 264
diff changeset
631 }
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parents: 264
diff changeset
632
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parents: 264
diff changeset
633 Recycle(instanceSize, hasher.HashPatient());
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parents: 264
diff changeset
634
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parents: 201
diff changeset
635 // Create the instance
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parents: 1297
diff changeset
636 int64_t instance = CreateResource(hasher.HashInstance(), ResourceType_Instance);
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parents: 1711
diff changeset
637 Toolbox::SetMainDicomTags(db_, instance, ResourceType_Instance, dicomSummary);
202
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parents: 201
diff changeset
638
432
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parents: 431
diff changeset
639 // Detect up to which level the patient/study/series/instance
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parents: 431
diff changeset
640 // hierarchy must be created
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
641 int64_t patient = -1, study = -1, series = -1;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
642 bool isNewPatient = false;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
643 bool isNewStudy = false;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
644 bool isNewSeries = false;
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parents: 431
diff changeset
645
0
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parents:
diff changeset
646 {
432
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parents: 431
diff changeset
647 ResourceType dummy;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
648
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parents: 1288
diff changeset
649 if (db_.LookupResource(series, dummy, hasher.HashSeries()))
432
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parents: 431
diff changeset
650 {
2b09d4ee86c6 refactoring
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parents: 431
diff changeset
651 assert(dummy == ResourceType_Series);
2b09d4ee86c6 refactoring
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parents: 431
diff changeset
652 // The patient, the study and the series already exist
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
653
1294
910478b2d4e4 refactoring
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parents: 1288
diff changeset
654 bool ok = (db_.LookupResource(patient, dummy, hasher.HashPatient()) &&
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parents: 1288
diff changeset
655 db_.LookupResource(study, dummy, hasher.HashStudy()));
432
2b09d4ee86c6 refactoring
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parents: 431
diff changeset
656 assert(ok);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
657 }
1294
910478b2d4e4 refactoring
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parents: 1288
diff changeset
658 else if (db_.LookupResource(study, dummy, hasher.HashStudy()))
432
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
659 {
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
660 assert(dummy == ResourceType_Study);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
661
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
662 // New series: The patient and the study already exist
2b09d4ee86c6 refactoring
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parents: 431
diff changeset
663 isNewSeries = true;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
664
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910478b2d4e4 refactoring
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parents: 1288
diff changeset
665 bool ok = db_.LookupResource(patient, dummy, hasher.HashPatient());
432
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parents: 431
diff changeset
666 assert(ok);
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parents: 431
diff changeset
667 }
1294
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parents: 1288
diff changeset
668 else if (db_.LookupResource(patient, dummy, hasher.HashPatient()))
432
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parents: 431
diff changeset
669 {
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parents: 431
diff changeset
670 assert(dummy == ResourceType_Patient);
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
671
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
672 // New study and series: The patient already exist
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
673 isNewStudy = true;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
674 isNewSeries = true;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
675 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
676 else
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
677 {
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
678 // New patient, study and series: Nothing exists
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
679 isNewPatient = true;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
680 isNewStudy = true;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
681 isNewSeries = true;
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
682 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
683 }
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
684
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
685 // Create the series if needed
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
686 if (isNewSeries)
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
687 {
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
688 series = CreateResource(hasher.HashSeries(), ResourceType_Series);
1716
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1711
diff changeset
689 Toolbox::SetMainDicomTags(db_, series, ResourceType_Series, dicomSummary);
432
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
690 }
202
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parents: 201
diff changeset
691
432
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
692 // Create the study if needed
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
693 if (isNewStudy)
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
694 {
1299
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
695 study = CreateResource(hasher.HashStudy(), ResourceType_Study);
1716
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parents: 1711
diff changeset
696 Toolbox::SetMainDicomTags(db_, study, ResourceType_Study, dicomSummary);
432
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
697 }
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
698
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
699 // Create the patient if needed
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
700 if (isNewPatient)
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
701 {
1299
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
702 patient = CreateResource(hasher.HashPatient(), ResourceType_Patient);
1716
2ca7888f8600 refactoring DicomIdentifiers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1711
diff changeset
703 Toolbox::SetMainDicomTags(db_, patient, ResourceType_Patient, dicomSummary);
432
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
704 }
202
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
705
432
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
706 // Create the parent-to-child links
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parents: 1246
diff changeset
707 db_.AttachChild(series, instance);
432
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
708
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
709 if (isNewSeries)
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
710 {
1247
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parents: 1246
diff changeset
711 db_.AttachChild(study, series);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
712 }
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
713
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
714 if (isNewStudy)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
715 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
716 db_.AttachChild(patient, study);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
717 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
718
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
719 // Sanity checks
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
720 assert(patient != -1);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
721 assert(study != -1);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
722 assert(series != -1);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
723 assert(instance != -1);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
724
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
725 // Attach the files to the newly created instance
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
726 for (Attachments::const_iterator it = attachments.begin();
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
727 it != attachments.end(); ++it)
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
728 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
729 db_.AddAttachment(instance, *it);
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
730 }
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
731
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
732 // Attach the user-specified metadata
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
733 for (MetadataMap::const_iterator
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
734 it = metadata.begin(); it != metadata.end(); ++it)
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
735 {
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
736 switch (it->first.first)
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
737 {
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
738 case ResourceType_Patient:
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
739 db_.SetMetadata(patient, it->first.second, it->second);
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
740 break;
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
741
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
742 case ResourceType_Study:
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
743 db_.SetMetadata(study, it->first.second, it->second);
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
744 break;
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
745
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
746 case ResourceType_Series:
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
747 db_.SetMetadata(series, it->first.second, it->second);
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
748 break;
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
749
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
750 case ResourceType_Instance:
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
751 db_.SetMetadata(instance, it->first.second, it->second);
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
752 instanceMetadata[it->first.second] = it->second;
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
753 break;
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
754
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
755 default:
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
756 throw OrthancException(ErrorCode_ParameterOutOfRange);
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
757 }
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
758 }
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
759
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
760 // Attach the auto-computed metadata for the patient/study/series levels
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
761 std::string now = Toolbox::GetNowIsoString();
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
762 db_.SetMetadata(series, MetadataType_LastUpdate, now);
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
763 db_.SetMetadata(study, MetadataType_LastUpdate, now);
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
764 db_.SetMetadata(patient, MetadataType_LastUpdate, now);
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
765
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
766 // Attach the auto-computed metadata for the instance level,
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
767 // reflecting these additions into the input metadata map
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
768 db_.SetMetadata(instance, MetadataType_Instance_ReceptionDate, now);
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
769 instanceMetadata[MetadataType_Instance_ReceptionDate] = now;
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
770
1822
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
771 db_.SetMetadata(instance, MetadataType_Instance_RemoteAet, instanceToStore.GetRemoteAet());
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
772 instanceMetadata[MetadataType_Instance_RemoteAet] = instanceToStore.GetRemoteAet();
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
773
1823
0ef4e6e66b56 "Origin" metadata for the instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1822
diff changeset
774 {
0ef4e6e66b56 "Origin" metadata for the instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1822
diff changeset
775 std::string s = EnumerationToString(instanceToStore.GetRequestOrigin());
0ef4e6e66b56 "Origin" metadata for the instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1822
diff changeset
776 db_.SetMetadata(instance, MetadataType_Instance_Origin, s);
0ef4e6e66b56 "Origin" metadata for the instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1822
diff changeset
777 instanceMetadata[MetadataType_Instance_Origin] = s;
0ef4e6e66b56 "Origin" metadata for the instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1822
diff changeset
778 }
0ef4e6e66b56 "Origin" metadata for the instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1822
diff changeset
779
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
780 const DicomValue* value;
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
781 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_INSTANCE_NUMBER)) != NULL ||
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
782 (value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGE_INDEX)) != NULL)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
783 {
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
784 if (!value->IsNull() &&
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
785 !value->IsBinary())
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
786 {
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
787 db_.SetMetadata(instance, MetadataType_Instance_IndexInSeries, value->GetContent());
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
788 instanceMetadata[MetadataType_Instance_IndexInSeries] = value->GetContent();
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
789 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
790 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
791
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
792 // Check whether the series of this new instance is now completed
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
793 if (isNewSeries)
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
794 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
795 ComputeExpectedNumberOfInstances(db_, series, dicomSummary);
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
796 }
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
797
205
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
798 SeriesStatus seriesStatus = GetSeriesStatus(series);
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
799 if (seriesStatus == SeriesStatus_Complete)
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
800 {
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
801 LogChange(series, ChangeType_CompletedSeries, ResourceType_Series, hasher.HashSeries());
205
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
802 }
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
803
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
804 // Mark the parent resources of this instance as unstable
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
805 MarkAsUnstable(series, ResourceType_Series, hasher.HashSeries());
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
806 MarkAsUnstable(study, ResourceType_Study, hasher.HashStudy());
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
807 MarkAsUnstable(patient, ResourceType_Patient, hasher.HashPatient());
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
808
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
809 t.Commit(instanceSize);
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
810
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
811 return StoreStatus_Success;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
812 }
62
a70bb32802ae renaming Server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
813 catch (OrthancException& e)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
814 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
815 LOG(ERROR) << "EXCEPTION [" << e.What() << "]";
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
816 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
817
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
818 return StoreStatus_Failure;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
819 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
820
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
821
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
822 void ServerIndex::ComputeStatistics(Json::Value& target)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
823 {
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
824 boost::mutex::scoped_lock lock(mutex_);
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
825 target = Json::objectValue;
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
826
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
827 uint64_t cs = currentStorageSize_;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
828 assert(cs == db_.GetTotalCompressedSize());
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
829 uint64_t us = db_.GetTotalUncompressedSize();
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
830 target["TotalDiskSize"] = boost::lexical_cast<std::string>(cs);
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
831 target["TotalUncompressedSize"] = boost::lexical_cast<std::string>(us);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
832 target["TotalDiskSizeMB"] = static_cast<unsigned int>(cs / MEGA_BYTES);
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
833 target["TotalUncompressedSizeMB"] = static_cast<unsigned int>(us / MEGA_BYTES);
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
834
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
835 target["CountPatients"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Patient));
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
836 target["CountStudies"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Study));
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
837 target["CountSeries"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Series));
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
838 target["CountInstances"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Instance));
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
839 }
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
840
187
8e673a65564d refactoring of storing new instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
841
8e673a65564d refactoring of storing new instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
842
585
b2357f1f026f fix types
jodogne
parents: 521
diff changeset
843 SeriesStatus ServerIndex::GetSeriesStatus(int64_t id)
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
844 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
845 // Get the expected number of instances in this series (from the metadata)
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
846 int64_t expected;
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
847 if (!GetMetadataAsInteger(expected, id, MetadataType_Series_ExpectedNumberOfInstances))
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
848 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
849 return SeriesStatus_Unknown;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
850 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
851
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
852 // Loop over the instances of this series
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
853 std::list<int64_t> children;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
854 db_.GetChildrenInternalId(children, id);
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
855
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
856 std::set<int64_t> instances;
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
857 for (std::list<int64_t>::const_iterator
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
858 it = children.begin(); it != children.end(); ++it)
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
859 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
860 // Get the index of this instance in the series
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
861 int64_t index;
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
862 if (!GetMetadataAsInteger(index, *it, MetadataType_Instance_IndexInSeries))
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
863 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
864 return SeriesStatus_Unknown;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
865 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
866
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
867 if (!(index > 0 && index <= expected))
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
868 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
869 // Out-of-range instance index
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
870 return SeriesStatus_Inconsistent;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
871 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
872
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
873 if (instances.find(index) != instances.end())
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
874 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
875 // Twice the same instance index
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
876 return SeriesStatus_Inconsistent;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
877 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
878
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
879 instances.insert(index);
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
880 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
881
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
882 if (static_cast<int64_t>(instances.size()) == expected)
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
883 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
884 return SeriesStatus_Complete;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
885 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
886 else
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
887 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
888 return SeriesStatus_Missing;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
889 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
890 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
891
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
892
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
893 void ServerIndex::MainDicomTagsToJson(Json::Value& target,
1668
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
894 int64_t resourceId,
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
895 ResourceType resourceType)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
896 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
897 DicomMap tags;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
898 db_.GetMainDicomTags(tags, resourceId);
1676
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
899
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
900 if (resourceType == ResourceType_Study)
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
901 {
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
902 DicomMap t1, t2;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
903 tags.ExtractStudyInformation(t1);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
904 tags.ExtractPatientInformation(t2);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
905
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
906 target["MainDicomTags"] = Json::objectValue;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
907 FromDcmtkBridge::ToJson(target["MainDicomTags"], t1, true);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
908
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
909 target["PatientMainDicomTags"] = Json::objectValue;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
910 FromDcmtkBridge::ToJson(target["PatientMainDicomTags"], t2, true);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
911 }
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
912 else
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
913 {
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
914 target["MainDicomTags"] = Json::objectValue;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
915 FromDcmtkBridge::ToJson(target["MainDicomTags"], tags, true);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
916 }
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
917 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
918
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
919 bool ServerIndex::LookupResource(Json::Value& result,
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
920 const std::string& publicId,
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
921 ResourceType expectedType)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
922 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
923 result = Json::objectValue;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
924
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
925 boost::mutex::scoped_lock lock(mutex_);
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
926
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
927 // Lookup for the requested resource
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
928 int64_t id;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
929 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
930 if (!db_.LookupResource(id, type, publicId) ||
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
931 type != expectedType)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
932 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
933 return false;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
934 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
935
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
936 // Find the parent resource (if it exists)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
937 if (type != ResourceType_Patient)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
938 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
939 int64_t parentId;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
940 if (!db_.LookupParent(parentId, id))
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
941 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
942 throw OrthancException(ErrorCode_InternalError);
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
943 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
944
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
945 std::string parent = db_.GetPublicId(parentId);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
946
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
947 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
948 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
949 case ResourceType_Study:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
950 result["ParentPatient"] = parent;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
951 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
952
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
953 case ResourceType_Series:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
954 result["ParentStudy"] = parent;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
955 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
956
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
957 case ResourceType_Instance:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
958 result["ParentSeries"] = parent;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
959 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
960
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
961 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
962 throw OrthancException(ErrorCode_InternalError);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
963 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
964 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
965
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
966 // List the children resources
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
967 std::list<std::string> children;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
968 db_.GetChildrenPublicId(children, id);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
969
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
970 if (type != ResourceType_Instance)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
971 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
972 Json::Value c = Json::arrayValue;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
973
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
974 for (std::list<std::string>::const_iterator
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
975 it = children.begin(); it != children.end(); ++it)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
976 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
977 c.append(*it);
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
978 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
979
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
980 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
981 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
982 case ResourceType_Patient:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
983 result["Studies"] = c;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
984 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
985
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
986 case ResourceType_Study:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
987 result["Series"] = c;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
988 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
989
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
990 case ResourceType_Series:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
991 result["Instances"] = c;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
992 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
993
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
994 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
995 throw OrthancException(ErrorCode_InternalError);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
996 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
997 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
998
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
999 // Set the resource type
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1000 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1001 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1002 case ResourceType_Patient:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1003 result["Type"] = "Patient";
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1004 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1005
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1006 case ResourceType_Study:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1007 result["Type"] = "Study";
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1008 break;
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1009
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1010 case ResourceType_Series:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1011 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1012 result["Type"] = "Series";
434
ccf3a0a43dac EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
1013 result["Status"] = EnumerationToString(GetSeriesStatus(id));
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1014
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1015 int64_t i;
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1016 if (GetMetadataAsInteger(i, id, MetadataType_Series_ExpectedNumberOfInstances))
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1017 result["ExpectedNumberOfInstances"] = static_cast<int>(i);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1018 else
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1019 result["ExpectedNumberOfInstances"] = Json::nullValue;
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1020
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1021 break;
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1022 }
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1023
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1024 case ResourceType_Instance:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1025 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1026 result["Type"] = "Instance";
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1027
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1028 FileInfo attachment;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1029 if (!db_.LookupAttachment(attachment, id, FileContentType_Dicom))
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1030 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1031 throw OrthancException(ErrorCode_InternalError);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1032 }
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1033
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1034 result["FileSize"] = static_cast<unsigned int>(attachment.GetUncompressedSize());
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1035 result["FileUuid"] = attachment.GetUuid();
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1036
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1037 int64_t i;
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1038 if (GetMetadataAsInteger(i, id, MetadataType_Instance_IndexInSeries))
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1039 result["IndexInSeries"] = static_cast<int>(i);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1040 else
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1041 result["IndexInSeries"] = Json::nullValue;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1042
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1043 break;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1044 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1045
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1046 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1047 throw OrthancException(ErrorCode_InternalError);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1048 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1049
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1050 // Record the remaining information
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1051 result["ID"] = publicId;
1668
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
1052 MainDicomTagsToJson(result, id, type);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1053
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1054 std::string tmp;
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1055
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1056 if (db_.LookupMetadata(tmp, id, MetadataType_AnonymizedFrom))
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1057 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1058 result["AnonymizedFrom"] = tmp;
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1059 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1060
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1061 if (db_.LookupMetadata(tmp, id, MetadataType_ModifiedFrom))
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1062 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1063 result["ModifiedFrom"] = tmp;
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1064 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1065
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1066 if (type == ResourceType_Patient ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1067 type == ResourceType_Study ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1068 type == ResourceType_Series)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1069 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1070 result["IsStable"] = !unstableResources_.Contains(id);
1148
ac36589f699e LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1139
diff changeset
1071
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1072 if (db_.LookupMetadata(tmp, id, MetadataType_LastUpdate))
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1073 {
1148
ac36589f699e LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1139
diff changeset
1074 result["LastUpdate"] = tmp;
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1075 }
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1076 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1077
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1078 return true;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1079 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1080
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1081
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1082 bool ServerIndex::LookupAttachment(FileInfo& attachment,
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1083 const std::string& instanceUuid,
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
1084 FileContentType contentType)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1085 {
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
1086 boost::mutex::scoped_lock lock(mutex_);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1087
193
a1b9d1e1497b failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1088 int64_t id;
a1b9d1e1497b failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1089 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1090 if (!db_.LookupResource(id, type, instanceUuid))
192
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1091 {
1113
ba5c0908600c Refactoring of HttpOutput ("Content-Length" header is now always sent)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1102
diff changeset
1092 throw OrthancException(ErrorCode_UnknownResource);
192
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1093 }
193
a1b9d1e1497b failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1094
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1095 if (db_.LookupAttachment(attachment, id, contentType))
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1096 {
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
1097 assert(attachment.GetContentType() == contentType);
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1098 return true;
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1099 }
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1100 else
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1101 {
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1102 return false;
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1103 }
192
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1104 }
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1105
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1106
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1107
1354
3dd494f201a1 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1352
diff changeset
1108 void ServerIndex::GetAllUuids(std::list<std::string>& target,
190
b6cef9d45cc3 getallpublicids
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1109 ResourceType resourceType)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1110 {
1357
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1354
diff changeset
1111 boost::mutex::scoped_lock lock(mutex_);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1354
diff changeset
1112 db_.GetAllPublicIds(target, resourceType);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1113 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1114
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1115
1509
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1116 void ServerIndex::GetAllUuids(std::list<std::string>& target,
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1117 ResourceType resourceType,
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1118 size_t since,
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1119 size_t limit)
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1120 {
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1121 if (limit == 0)
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1122 {
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1123 target.clear();
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1124 return;
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1125 }
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1126
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1127 boost::mutex::scoped_lock lock(mutex_);
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1128 db_.GetAllPublicIds(target, resourceType, since, limit);
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1129 }
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1130
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1131
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1132 template <typename T>
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1133 static void FormatLog(Json::Value& target,
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1134 const std::list<T>& log,
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1135 const std::string& name,
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1136 bool done,
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1137 int64_t since)
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1138 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1139 Json::Value items = Json::arrayValue;
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1140 for (typename std::list<T>::const_iterator
1304
7b6925b0890d cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1300
diff changeset
1141 it = log.begin(); it != log.end(); ++it)
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1142 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1143 Json::Value item;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1144 it->Format(item);
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1145 items.append(item);
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1146 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1147
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1148 target = Json::objectValue;
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1149 target[name] = items;
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1150 target["Done"] = done;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1151
1305
536515f87cb4 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1304
diff changeset
1152 int64_t last = (log.empty() ? since : log.back().GetSeq());
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1153 target["Last"] = static_cast<int>(last);
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1154 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1155
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1156
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1157 void ServerIndex::GetChanges(Json::Value& target,
204
7f4acf490179 changes api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 202
diff changeset
1158 int64_t since,
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1159 unsigned int maxResults)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1160 {
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1161 std::list<ServerIndexChange> changes;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1162 bool done;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1163
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1164 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1165 boost::mutex::scoped_lock lock(mutex_);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1166 db_.GetChanges(changes, done, since, maxResults);
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1167 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1168
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1169 FormatLog(target, changes, "Changes", done, since);
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1170 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1171
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1172
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1173 void ServerIndex::GetLastChange(Json::Value& target)
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1174 {
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1175 std::list<ServerIndexChange> changes;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1176
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1177 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1178 boost::mutex::scoped_lock lock(mutex_);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1179 db_.GetLastChange(changes);
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1180 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1181
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1182 FormatLog(target, changes, "Changes", true, 0);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1183 }
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1184
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1185
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1186 void ServerIndex::LogExportedResource(const std::string& publicId,
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1187 const std::string& remoteModality)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1188 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1189 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1190 Transaction transaction(*this);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1191
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1192 int64_t id;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1193 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1194 if (!db_.LookupResource(id, type, publicId))
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1195 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1196 throw OrthancException(ErrorCode_InternalError);
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1197 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1198
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1199 std::string patientId;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1200 std::string studyInstanceUid;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1201 std::string seriesInstanceUid;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1202 std::string sopInstanceUid;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1203
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1204 int64_t currentId = id;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1205 ResourceType currentType = type;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1206
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1207 // Iteratively go up inside the patient/study/series/instance hierarchy
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1208 bool done = false;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1209 while (!done)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1210 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1211 DicomMap map;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1212 db_.GetMainDicomTags(map, currentId);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1213
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1214 switch (currentType)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1215 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1216 case ResourceType_Patient:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1217 if (map.HasTag(DICOM_TAG_PATIENT_ID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1218 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1219 patientId = map.GetValue(DICOM_TAG_PATIENT_ID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1220 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1221 done = true;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1222 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1223
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1224 case ResourceType_Study:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1225 if (map.HasTag(DICOM_TAG_STUDY_INSTANCE_UID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1226 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1227 studyInstanceUid = map.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1228 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1229 currentType = ResourceType_Patient;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1230 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1231
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1232 case ResourceType_Series:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1233 if (map.HasTag(DICOM_TAG_SERIES_INSTANCE_UID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1234 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1235 seriesInstanceUid = map.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1236 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1237 currentType = ResourceType_Study;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1238 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1239
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1240 case ResourceType_Instance:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1241 if (map.HasTag(DICOM_TAG_SOP_INSTANCE_UID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1242 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1243 sopInstanceUid = map.GetValue(DICOM_TAG_SOP_INSTANCE_UID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1244 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1245 currentType = ResourceType_Series;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1246 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1247
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1248 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1249 throw OrthancException(ErrorCode_InternalError);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1250 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1251
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1252 // If we have not reached the Patient level, find the parent of
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1253 // the current resource
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1254 if (!done)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1255 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1256 bool ok = db_.LookupParent(currentId, currentId);
375
d1ea72f1c967 major fix of storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1257 assert(ok);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1258 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1259 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1260
1246
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1261 ExportedResource resource(-1,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1262 type,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1263 publicId,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1264 remoteModality,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1265 Toolbox::GetNowIsoString(),
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1266 patientId,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1267 studyInstanceUid,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1268 seriesInstanceUid,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1269 sopInstanceUid);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1270
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1271 db_.LogExportedResource(resource);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1272 transaction.Commit(0);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1273 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1274
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1275
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1276 void ServerIndex::GetExportedResources(Json::Value& target,
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1277 int64_t since,
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1278 unsigned int maxResults)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1279 {
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1280 std::list<ExportedResource> exported;
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1281 bool done;
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1282
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1283 {
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1284 boost::mutex::scoped_lock lock(mutex_);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1285 db_.GetExportedResources(exported, done, since, maxResults);
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1286 }
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1287
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1288 FormatLog(target, exported, "Exports", done, since);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1289 }
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1290
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1291
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1292 void ServerIndex::GetLastExportedResource(Json::Value& target)
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1293 {
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1294 std::list<ExportedResource> exported;
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1295
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1296 {
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1297 boost::mutex::scoped_lock lock(mutex_);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1298 db_.GetLastExportedResource(exported);
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1299 }
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1300
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1301 FormatLog(target, exported, "Exports", true, 0);
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1302 }
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1303
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1304
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1305 bool ServerIndex::IsRecyclingNeeded(uint64_t instanceSize)
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1306 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1307 if (maximumStorageSize_ != 0)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1308 {
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
1309 uint64_t currentSize = currentStorageSize_ - listener_->GetSizeOfFilesToRemove();
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1310 assert(db_.GetTotalCompressedSize() == currentSize);
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
1311
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1312 if (currentSize + instanceSize > maximumStorageSize_)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1313 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1314 return true;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1315 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1316 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1317
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1318 if (maximumPatients_ != 0)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1319 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1320 uint64_t patientCount = db_.GetResourceCount(ResourceType_Patient);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1321 if (patientCount > maximumPatients_)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1322 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1323 return true;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1324 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1325 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1326
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1327 return false;
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1328 }
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1329
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1330
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1331 void ServerIndex::Recycle(uint64_t instanceSize,
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1332 const std::string& newPatientId)
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1333 {
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1334 if (!IsRecyclingNeeded(instanceSize))
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1335 {
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1336 return;
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1337 }
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1338
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1339 // Check whether other DICOM instances from this patient are
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1340 // already stored
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1341 int64_t patientToAvoid;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1342 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1343 bool hasPatientToAvoid = db_.LookupResource(patientToAvoid, type, newPatientId);
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1344
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1345 if (hasPatientToAvoid && type != ResourceType_Patient)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1346 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1347 throw OrthancException(ErrorCode_InternalError);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1348 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1349
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1350 // Iteratively select patient to remove until there is enough
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1351 // space in the DICOM store
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1352 int64_t patientToRecycle;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1353 while (true)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1354 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1355 // If other instances of this patient are already in the store,
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1356 // we must avoid to recycle them
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1357 bool ok = hasPatientToAvoid ?
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1358 db_.SelectPatientToRecycle(patientToRecycle, patientToAvoid) :
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1359 db_.SelectPatientToRecycle(patientToRecycle);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1360
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1361 if (!ok)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1362 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1363 throw OrthancException(ErrorCode_FullStorage);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1364 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1365
1331
77e129ba64e4 Prevent freeze on C-FIND if no DICOM tag is to be returned
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1310
diff changeset
1366 VLOG(1) << "Recycling one patient";
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1367 db_.DeleteResource(patientToRecycle);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1368
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1369 if (!IsRecyclingNeeded(instanceSize))
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1370 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1371 // OK, we're done
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1372 break;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1373 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1374 }
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1375 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1376
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1377 void ServerIndex::SetMaximumPatientCount(unsigned int count)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1378 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1379 boost::mutex::scoped_lock lock(mutex_);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1380 maximumPatients_ = count;
270
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1381
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1382 if (count == 0)
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1383 {
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1384 LOG(WARNING) << "No limit on the number of stored patients";
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1385 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1386 else
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1387 {
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1388 LOG(WARNING) << "At most " << count << " patients will be stored";
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1389 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1390
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1391 StandaloneRecycling();
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1392 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1393
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1394 void ServerIndex::SetMaximumStorageSize(uint64_t size)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1395 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1396 boost::mutex::scoped_lock lock(mutex_);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1397 maximumStorageSize_ = size;
270
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1398
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1399 if (size == 0)
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1400 {
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1401 LOG(WARNING) << "No limit on the size of the storage area";
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1402 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1403 else
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1404 {
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1405 LOG(WARNING) << "At most " << (size / MEGA_BYTES) << "MB will be used for the storage area";
270
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1406 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1407
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1408 StandaloneRecycling();
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1409 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1410
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1411 void ServerIndex::StandaloneRecycling()
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1412 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1413 // WARNING: No mutex here, do not include this as a public method
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
1414 Transaction t(*this);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1415 Recycle(0, "");
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
1416 t.Commit(0);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1417 }
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1418
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1419
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1420 bool ServerIndex::IsProtectedPatient(const std::string& publicId)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1421 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1422 boost::mutex::scoped_lock lock(mutex_);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1423
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1424 // Lookup for the requested resource
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1425 int64_t id;
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1426 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1427 if (!db_.LookupResource(id, type, publicId) ||
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1428 type != ResourceType_Patient)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1429 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1430 throw OrthancException(ErrorCode_ParameterOutOfRange);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1431 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1432
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1433 return db_.IsProtectedPatient(id);
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1434 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1435
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1436
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1437 void ServerIndex::SetProtectedPatient(const std::string& publicId,
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1438 bool isProtected)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1439 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1440 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1441 Transaction transaction(*this);
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1442
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1443 // Lookup for the requested resource
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1444 int64_t id;
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1445 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1446 if (!db_.LookupResource(id, type, publicId) ||
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1447 type != ResourceType_Patient)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1448 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1449 throw OrthancException(ErrorCode_ParameterOutOfRange);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1450 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1451
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1452 db_.SetProtectedPatient(id, isProtected);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1453 transaction.Commit(0);
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1454
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1455 if (isProtected)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1456 LOG(INFO) << "Patient " << publicId << " has been protected";
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1457 else
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1458 LOG(INFO) << "Patient " << publicId << " has been unprotected";
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1459 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1460
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1461
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1462 void ServerIndex::GetChildren(std::list<std::string>& result,
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1463 const std::string& publicId)
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1464 {
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1465 result.clear();
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1466
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1467 boost::mutex::scoped_lock lock(mutex_);
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1468
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1469 ResourceType type;
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1470 int64_t resource;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1471 if (!db_.LookupResource(resource, type, publicId))
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1472 {
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1473 throw OrthancException(ErrorCode_UnknownResource);
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1474 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1475
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1476 if (type == ResourceType_Instance)
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1477 {
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1478 // An instance cannot have a child
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1479 throw OrthancException(ErrorCode_BadParameterType);
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1480 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1481
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1482 std::list<int64_t> tmp;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1483 db_.GetChildrenInternalId(tmp, resource);
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1484
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1485 for (std::list<int64_t>::const_iterator
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1486 it = tmp.begin(); it != tmp.end(); ++it)
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1487 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1488 result.push_back(db_.GetPublicId(*it));
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1489 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1490 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1491
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1492
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1493 void ServerIndex::GetChildInstances(std::list<std::string>& result,
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1494 const std::string& publicId)
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1495 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1496 result.clear();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1497
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1498 boost::mutex::scoped_lock lock(mutex_);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1499
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1500 ResourceType type;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1501 int64_t top;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1502 if (!db_.LookupResource(top, type, publicId))
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1503 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1504 throw OrthancException(ErrorCode_UnknownResource);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1505 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1506
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1507 if (type == ResourceType_Instance)
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1508 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1509 // The resource is already an instance: Do not go down the hierarchy
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1510 result.push_back(publicId);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1511 return;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1512 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1513
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1514 std::stack<int64_t> toExplore;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1515 toExplore.push(top);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1516
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1517 std::list<int64_t> tmp;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1518
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1519 while (!toExplore.empty())
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1520 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1521 // Get the internal ID of the current resource
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1522 int64_t resource = toExplore.top();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1523 toExplore.pop();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1524
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1525 if (db_.GetResourceType(resource) == ResourceType_Instance)
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1526 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1527 result.push_back(db_.GetPublicId(resource));
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1528 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1529 else
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1530 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1531 // Tag all the children of this resource as to be explored
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1532 db_.GetChildrenInternalId(tmp, resource);
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1533 for (std::list<int64_t>::const_iterator
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
1534 it = tmp.begin(); it != tmp.end(); ++it)
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1535 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1536 toExplore.push(*it);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1537 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1538 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1539 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1540 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1541
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1542
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1543 void ServerIndex::SetMetadata(const std::string& publicId,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1544 MetadataType type,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1545 const std::string& value)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1546 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1547 boost::mutex::scoped_lock lock(mutex_);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1548 Transaction t(*this);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1549
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1550 ResourceType rtype;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1551 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1552 if (!db_.LookupResource(id, rtype, publicId))
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1553 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1554 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1555 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1556
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1557 db_.SetMetadata(id, type, value);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1558
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1559 if (IsUserMetadata(type))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1560 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1561 LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1562 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1563
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1564 t.Commit(0);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1565 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1566
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1567
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1568 void ServerIndex::DeleteMetadata(const std::string& publicId,
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1569 MetadataType type)
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1570 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1571 boost::mutex::scoped_lock lock(mutex_);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1572 Transaction t(*this);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1573
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1574 ResourceType rtype;
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1575 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1576 if (!db_.LookupResource(id, rtype, publicId))
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1577 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1578 throw OrthancException(ErrorCode_UnknownResource);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1579 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1580
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1581 db_.DeleteMetadata(id, type);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1582
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1583 if (IsUserMetadata(type))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1584 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1585 LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1586 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1587
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1588 t.Commit(0);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1589 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1590
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1591
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1592 bool ServerIndex::LookupMetadata(std::string& target,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1593 const std::string& publicId,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1594 MetadataType type)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1595 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1596 boost::mutex::scoped_lock lock(mutex_);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1597
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1598 ResourceType rtype;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1599 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1600 if (!db_.LookupResource(id, rtype, publicId))
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1601 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1602 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1603 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1604
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1605 return db_.LookupMetadata(target, id, type);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1606 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1607
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1608
739
696dbb4fd390 api uniformization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
1609 void ServerIndex::ListAvailableMetadata(std::list<MetadataType>& target,
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1610 const std::string& publicId)
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1611 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1612 boost::mutex::scoped_lock lock(mutex_);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1613
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1614 ResourceType rtype;
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1615 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1616 if (!db_.LookupResource(id, rtype, publicId))
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1617 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1618 throw OrthancException(ErrorCode_UnknownResource);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1619 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1620
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1621 db_.ListAvailableMetadata(target, id);
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1622 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1623
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1624
697
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1625 void ServerIndex::ListAvailableAttachments(std::list<FileContentType>& target,
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1626 const std::string& publicId,
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1627 ResourceType expectedType)
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1628 {
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1629 boost::mutex::scoped_lock lock(mutex_);
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1630
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1631 ResourceType type;
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1632 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1633 if (!db_.LookupResource(id, type, publicId) ||
697
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1634 expectedType != type)
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1635 {
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1636 throw OrthancException(ErrorCode_UnknownResource);
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1637 }
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1638
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1639 db_.ListAvailableAttachments(target, id);
697
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1640 }
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1641
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1642
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1643 bool ServerIndex::LookupParent(std::string& target,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1644 const std::string& publicId)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1645 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1646 boost::mutex::scoped_lock lock(mutex_);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1647
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1648 ResourceType type;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1649 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1650 if (!db_.LookupResource(id, type, publicId))
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1651 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1652 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1653 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1654
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1655 int64_t parentId;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1656 if (db_.LookupParent(parentId, id))
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1657 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1658 target = db_.GetPublicId(parentId);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1659 return true;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1660 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1661 else
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1662 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1663 return false;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1664 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1665 }
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1666
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1667
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1668 uint64_t ServerIndex::IncrementGlobalSequence(GlobalProperty sequence)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1669 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1670 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1671 Transaction transaction(*this);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1672
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1673 uint64_t seq = IncrementGlobalSequenceInternal(sequence);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1674 transaction.Commit(0);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1675
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1676 return seq;
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1677 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1678
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1679
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1680
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1681 void ServerIndex::LogChange(ChangeType changeType,
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1682 const std::string& publicId)
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1683 {
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1684 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1685 Transaction transaction(*this);
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1686
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1687 int64_t id;
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1688 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1689 if (!db_.LookupResource(id, type, publicId))
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1690 {
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1691 throw OrthancException(ErrorCode_UnknownResource);
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1692 }
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1693
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1694 LogChange(id, changeType, type, publicId);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1695 transaction.Commit(0);
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1696 }
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1697
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1698
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1699 void ServerIndex::DeleteChanges()
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1700 {
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1701 boost::mutex::scoped_lock lock(mutex_);
1286
b4acdb37e43b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1271
diff changeset
1702 db_.ClearChanges();
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1703 }
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1704
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1705 void ServerIndex::DeleteExportedResources()
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1706 {
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1707 boost::mutex::scoped_lock lock(mutex_);
1286
b4acdb37e43b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1271
diff changeset
1708 db_.ClearExportedResources();
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1709 }
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1710
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1711
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1712 void ServerIndex::GetStatisticsInternal(/* out */ uint64_t& compressedSize,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1713 /* out */ uint64_t& uncompressedSize,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1714 /* out */ unsigned int& countStudies,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1715 /* out */ unsigned int& countSeries,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1716 /* out */ unsigned int& countInstances,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1717 /* in */ int64_t id,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1718 /* in */ ResourceType type)
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1719 {
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1720 std::stack<int64_t> toExplore;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1721 toExplore.push(id);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1722
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1723 countInstances = 0;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1724 countSeries = 0;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1725 countStudies = 0;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1726 compressedSize = 0;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1727 uncompressedSize = 0;
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1728
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1729 while (!toExplore.empty())
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1730 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1731 // Get the internal ID of the current resource
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1732 int64_t resource = toExplore.top();
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1733 toExplore.pop();
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1734
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1735 ResourceType thisType = db_.GetResourceType(resource);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1736
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1737 std::list<FileContentType> f;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1738 db_.ListAvailableAttachments(f, resource);
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1739
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1740 for (std::list<FileContentType>::const_iterator
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1741 it = f.begin(); it != f.end(); ++it)
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1742 {
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1743 FileInfo attachment;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1744 if (db_.LookupAttachment(attachment, resource, *it))
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1745 {
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1746 compressedSize += attachment.GetCompressedSize();
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1747 uncompressedSize += attachment.GetUncompressedSize();
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1748 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1749 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1750
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1751 if (thisType == ResourceType_Instance)
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1752 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1753 countInstances++;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1754 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1755 else
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1756 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1757 switch (thisType)
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1758 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1759 case ResourceType_Study:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1760 countStudies++;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1761 break;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1762
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1763 case ResourceType_Series:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1764 countSeries++;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1765 break;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1766
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1767 default:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1768 break;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1769 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1770
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1771 // Tag all the children of this resource as to be explored
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1772 std::list<int64_t> tmp;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1773 db_.GetChildrenInternalId(tmp, resource);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1774 for (std::list<int64_t>::const_iterator
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
1775 it = tmp.begin(); it != tmp.end(); ++it)
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1776 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1777 toExplore.push(*it);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1778 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1779 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1780 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1781
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1782 if (countStudies == 0)
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1783 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1784 countStudies = 1;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1785 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1786
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1787 if (countSeries == 0)
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1788 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1789 countSeries = 1;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1790 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1791 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1792
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1793
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1794
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1795 void ServerIndex::GetStatistics(Json::Value& target,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1796 const std::string& publicId)
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1797 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1798 boost::mutex::scoped_lock lock(mutex_);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1799
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1800 ResourceType type;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1801 int64_t top;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1802 if (!db_.LookupResource(top, type, publicId))
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1803 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1804 throw OrthancException(ErrorCode_UnknownResource);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1805 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1806
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1807 uint64_t uncompressedSize;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1808 uint64_t compressedSize;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1809 unsigned int countStudies;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1810 unsigned int countSeries;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1811 unsigned int countInstances;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1812 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1813 countSeries, countInstances, top, type);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1814
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1815 target = Json::objectValue;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1816 target["DiskSize"] = boost::lexical_cast<std::string>(compressedSize);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1817 target["DiskSizeMB"] = static_cast<unsigned int>(compressedSize / MEGA_BYTES);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1818 target["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1819 target["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1820
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1821 switch (type)
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1822 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1823 // Do NOT add "break" below this point!
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1824 case ResourceType_Patient:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1825 target["CountStudies"] = countStudies;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1826
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1827 case ResourceType_Study:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1828 target["CountSeries"] = countSeries;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1829
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1830 case ResourceType_Series:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1831 target["CountInstances"] = countInstances;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1832
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1833 case ResourceType_Instance:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1834 default:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1835 break;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1836 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1837 }
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1838
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1839
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1840 void ServerIndex::GetStatistics(/* out */ uint64_t& compressedSize,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1841 /* out */ uint64_t& uncompressedSize,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1842 /* out */ unsigned int& countStudies,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1843 /* out */ unsigned int& countSeries,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1844 /* out */ unsigned int& countInstances,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1845 const std::string& publicId)
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1846 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1847 boost::mutex::scoped_lock lock(mutex_);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1848
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1849 ResourceType type;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1850 int64_t top;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1851 if (!db_.LookupResource(top, type, publicId))
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1852 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1853 throw OrthancException(ErrorCode_UnknownResource);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1854 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1855
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1856 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1857 countSeries, countInstances, top, type);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1858 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1859
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1860
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1861 void ServerIndex::UnstableResourcesMonitorThread(ServerIndex* that)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1862 {
2069
fabf7820d1f1 New configuration options: "DicomScuTimeout" and "DicomScpTimeout" + validation of non-negative options
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1900
diff changeset
1863 int stableAge = Configuration::GetGlobalUnsignedIntegerParameter("StableAge", 60);
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1864 if (stableAge <= 0)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1865 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1866 stableAge = 60;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1867 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1868
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1869 LOG(INFO) << "Starting the monitor for stable resources (stable age = " << stableAge << ")";
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1870
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1871 while (!that->done_)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1872 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1873 // Check for stable resources each second
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1874 boost::this_thread::sleep(boost::posix_time::seconds(1));
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1875
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1876 boost::mutex::scoped_lock lock(that->mutex_);
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1877
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1878 while (!that->unstableResources_.IsEmpty() &&
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1879 that->unstableResources_.GetOldestPayload().GetAge() > static_cast<unsigned int>(stableAge))
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1880 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1881 // This DICOM resource has not received any new instance for
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1882 // some time. It can be considered as stable.
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1883
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1884 UnstableResourcePayload payload;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1885 int64_t id = that->unstableResources_.RemoveOldest(payload);
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1886
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1887 // Ensure that the resource is still existing before logging the change
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1888 if (that->db_.IsExistingResource(id))
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1889 {
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1890 switch (payload.GetResourceType())
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1891 {
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1892 case ResourceType_Patient:
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1893 that->LogChange(id, ChangeType_StablePatient, ResourceType_Patient, payload.GetPublicId());
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1894 break;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1895
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1896 case ResourceType_Study:
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1897 that->LogChange(id, ChangeType_StableStudy, ResourceType_Study, payload.GetPublicId());
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1898 break;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1899
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1900 case ResourceType_Series:
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1901 that->LogChange(id, ChangeType_StableSeries, ResourceType_Series, payload.GetPublicId());
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1902 break;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1903
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1904 default:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1905 throw OrthancException(ErrorCode_InternalError);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1906 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1907
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1908 //LOG(INFO) << "Stable resource: " << EnumerationToString(payload.type_) << " " << id;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1909 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1910 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1911 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1912
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1913 LOG(INFO) << "Closing the monitor thread for stable resources";
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1914 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1915
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1916
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1917 void ServerIndex::MarkAsUnstable(int64_t id,
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1918 Orthanc::ResourceType type,
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1919 const std::string& publicId)
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1920 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1921 // WARNING: Before calling this method, "mutex_" must be locked.
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1922
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1923 assert(type == Orthanc::ResourceType_Patient ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1924 type == Orthanc::ResourceType_Study ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1925 type == Orthanc::ResourceType_Series);
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1926
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1927 UnstableResourcePayload payload(type, publicId);
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1928 unstableResources_.AddOrMakeMostRecent(id, payload);
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1929 //LOG(INFO) << "Unstable resource: " << EnumerationToString(type) << " " << id;
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1177
diff changeset
1930
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1931 LogChange(id, ChangeType_NewChildInstance, type, publicId);
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1932 }
521
2c739f76d0bb lookup tag values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 513
diff changeset
1933
2c739f76d0bb lookup tag values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 513
diff changeset
1934
2c739f76d0bb lookup tag values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 513
diff changeset
1935
1728
4941494b5dd8 rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1727
diff changeset
1936 void ServerIndex::LookupIdentifierExact(std::list<std::string>& result,
4941494b5dd8 rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1727
diff changeset
1937 ResourceType level,
4941494b5dd8 rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1727
diff changeset
1938 const DicomTag& tag,
4941494b5dd8 rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1727
diff changeset
1939 const std::string& value)
615
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
1940 {
1727
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
1941 assert((level == ResourceType_Patient && tag == DICOM_TAG_PATIENT_ID) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
1942 (level == ResourceType_Study && tag == DICOM_TAG_STUDY_INSTANCE_UID) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
1943 (level == ResourceType_Study && tag == DICOM_TAG_ACCESSION_NUMBER) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
1944 (level == ResourceType_Series && tag == DICOM_TAG_SERIES_INSTANCE_UID) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
1945 (level == ResourceType_Instance && tag == DICOM_TAG_SOP_INSTANCE_UID));
1725
a7c05bbfaf6a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1721
diff changeset
1946
615
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
1947 result.clear();
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
1948
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
1949 boost::mutex::scoped_lock lock(mutex_);
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
1950
1746
d143db00a794 SetOfResources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1744
diff changeset
1951 LookupIdentifierQuery query(level);
d143db00a794 SetOfResources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1744
diff changeset
1952 query.AddConstraint(tag, IdentifierConstraintType_Equal, value);
d143db00a794 SetOfResources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1744
diff changeset
1953 query.Apply(result, db_);
615
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
1954 }
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
1955
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
1956
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1957 StoreStatus ServerIndex::AddAttachment(const FileInfo& attachment,
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1958 const std::string& publicId)
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1959 {
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1960 boost::mutex::scoped_lock lock(mutex_);
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1961
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1962 Transaction t(*this);
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1963
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1964 ResourceType resourceType;
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1965 int64_t resourceId;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1966 if (!db_.LookupResource(resourceId, resourceType, publicId))
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1967 {
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1968 return StoreStatus_Failure; // Inexistent resource
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1969 }
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1970
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1971 // Remove possible previous attachment
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1972 db_.DeleteAttachment(resourceId, attachment.GetContentType());
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1973
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1974 // Locate the patient of the target resource
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1975 int64_t patientId = resourceId;
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1976 for (;;)
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1977 {
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1978 int64_t parent;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1979 if (db_.LookupParent(parent, patientId))
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1980 {
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1981 // We have not reached the patient level yet
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1982 patientId = parent;
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1983 }
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1984 else
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1985 {
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1986 // We have reached the patient level
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1987 break;
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1988 }
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1989 }
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1990
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1991 // Possibly apply the recycling mechanism while preserving this patient
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1992 assert(db_.GetResourceType(patientId) == ResourceType_Patient);
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1993 Recycle(attachment.GetCompressedSize(), db_.GetPublicId(patientId));
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
1994
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1995 db_.AddAttachment(resourceId, attachment);
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
1996
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1997 if (IsUserContentType(attachment.GetContentType()))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1998 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1999 LogChange(resourceId, ChangeType_UpdatedAttachment, resourceType, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2000 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2001
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2002 t.Commit(attachment.GetCompressedSize());
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2003
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2004 return StoreStatus_Success;
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2005 }
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2006
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2007
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2008 void ServerIndex::DeleteAttachment(const std::string& publicId,
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2009 FileContentType type)
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2010 {
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2011 boost::mutex::scoped_lock lock(mutex_);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2012 Transaction t(*this);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2013
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2014 ResourceType rtype;
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2015 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
2016 if (!db_.LookupResource(id, rtype, publicId))
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2017 {
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2018 throw OrthancException(ErrorCode_UnknownResource);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2019 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2020
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2021 db_.DeleteAttachment(id, type);
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2022
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2023 if (IsUserContentType(type))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2024 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2025 LogChange(id, ChangeType_UpdatedAttachment, rtype, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2026 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2027
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2028 t.Commit(0);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2029 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2030
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2031
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2032 bool ServerIndex::GetMetadata(Json::Value& target,
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2033 const std::string& publicId)
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2034 {
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2035 boost::mutex::scoped_lock lock(mutex_);
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2036
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2037 target = Json::objectValue;
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2038
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2039 ResourceType type;
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2040 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
2041 if (!db_.LookupResource(id, type, publicId))
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2042 {
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2043 return false;
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2044 }
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2045
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2046 std::list<MetadataType> metadata;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2047 db_.ListAvailableMetadata(metadata, id);
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2048
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2049 for (std::list<MetadataType>::const_iterator
1304
7b6925b0890d cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1300
diff changeset
2050 it = metadata.begin(); it != metadata.end(); ++it)
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2051 {
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2052 std::string key = EnumerationToString(*it);
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2053
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2054 std::string value;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2055 if (!db_.LookupMetadata(value, id, *it))
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2056 {
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2057 value.clear();
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2058 }
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2059
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2060 target[key] = value;
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2061 }
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2062
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2063 return true;
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2064 }
1218
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2065
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2066
1249
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2067 void ServerIndex::SetGlobalProperty(GlobalProperty property,
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2068 const std::string& value)
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2069 {
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2070 boost::mutex::scoped_lock lock(mutex_);
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2071 db_.SetGlobalProperty(property, value);
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2072 }
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2073
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2074
1218
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2075 std::string ServerIndex::GetGlobalProperty(GlobalProperty property,
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2076 const std::string& defaultValue)
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2077 {
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2078 boost::mutex::scoped_lock lock(mutex_);
1239
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2079
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2080 std::string value;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2081 if (db_.LookupGlobalProperty(value, property))
1239
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2082 {
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2083 return value;
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2084 }
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2085 else
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2086 {
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2087 return defaultValue;
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2088 }
1218
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2089 }
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2090
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2091
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2092 bool ServerIndex::GetMainDicomTags(DicomMap& result,
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2093 const std::string& publicId,
1677
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2094 ResourceType expectedType,
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2095 ResourceType levelOfInterest)
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2096 {
1677
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2097 // Yes, the following test could be shortened, but we wish to make it as clear as possible
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2098 if (!(expectedType == ResourceType_Patient && levelOfInterest == ResourceType_Patient) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2099 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Patient) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2100 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Study) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2101 !(expectedType == ResourceType_Series && levelOfInterest == ResourceType_Series) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2102 !(expectedType == ResourceType_Instance && levelOfInterest == ResourceType_Instance))
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2103 {
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2104 throw OrthancException(ErrorCode_ParameterOutOfRange);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2105 }
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2106
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2107 result.Clear();
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2108
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2109 boost::mutex::scoped_lock lock(mutex_);
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2110
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2111 // Lookup for the requested resource
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2112 int64_t id;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2113 ResourceType type;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2114 if (!db_.LookupResource(id, type, publicId) ||
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2115 type != expectedType)
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2116 {
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2117 return false;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2118 }
1677
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2119
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2120 if (type == ResourceType_Study)
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2121 {
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2122 DicomMap tmp;
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2123 db_.GetMainDicomTags(tmp, id);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2124
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2125 switch (levelOfInterest)
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2126 {
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2127 case ResourceType_Patient:
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2128 tmp.ExtractPatientInformation(result);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2129 return true;
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2130
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2131 case ResourceType_Study:
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2132 tmp.ExtractStudyInformation(result);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2133 return true;
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2134
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2135 default:
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2136 throw OrthancException(ErrorCode_InternalError);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2137 }
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2138 }
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2139 else
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2140 {
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2141 db_.GetMainDicomTags(result, id);
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2142 return true;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2143 }
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2144 }
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2145
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2146
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2147 bool ServerIndex::LookupResourceType(ResourceType& type,
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2148 const std::string& publicId)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2149 {
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2150 boost::mutex::scoped_lock lock(mutex_);
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2151
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2152 int64_t id;
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2153 return db_.LookupResource(id, type, publicId);
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2154 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2155
1668
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2156
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2157 unsigned int ServerIndex::GetDatabaseVersion()
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2158 {
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2159 boost::mutex::scoped_lock lock(mutex_);
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2160 return db_.GetDatabaseVersion();
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2161 }
1750
55d52567bebb LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1747
diff changeset
2162
55d52567bebb LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1747
diff changeset
2163
1753
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2164 void ServerIndex::FindCandidates(std::vector<std::string>& resources,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2165 std::vector<std::string>& instances,
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1754
diff changeset
2166 const ::Orthanc::LookupResource& lookup)
1750
55d52567bebb LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1747
diff changeset
2167 {
1753
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2168 boost::mutex::scoped_lock lock(mutex_);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2169
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2170 std::list<int64_t> tmp;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2171 lookup.FindCandidates(tmp, db_);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2172
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2173 resources.resize(tmp.size());
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2174 instances.resize(tmp.size());
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2175
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2176 size_t pos = 0;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2177 for (std::list<int64_t>::const_iterator
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2178 it = tmp.begin(); it != tmp.end(); ++it, pos++)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2179 {
1754
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1753
diff changeset
2180 assert(db_.GetResourceType(*it) == lookup.GetLevel());
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1753
diff changeset
2181
1753
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2182 int64_t instance;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2183 if (!Toolbox::FindOneChildInstance(instance, db_, *it, lookup.GetLevel()))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2184 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2185 throw OrthancException(ErrorCode_InternalError);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2186 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2187
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2188 resources[pos] = db_.GetPublicId(*it);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2189 instances[pos] = db_.GetPublicId(instance);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2190 }
1750
55d52567bebb LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1747
diff changeset
2191 }
1898
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2192
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2193
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2194 bool ServerIndex::LookupParent(std::string& target,
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2195 const std::string& publicId,
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2196 ResourceType parentType)
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2197 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2198 boost::mutex::scoped_lock lock(mutex_);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2199
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2200 ResourceType type;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2201 int64_t id;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2202 if (!db_.LookupResource(id, type, publicId))
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2203 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2204 throw OrthancException(ErrorCode_UnknownResource);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2205 }
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2206
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2207 while (type != parentType)
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2208 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2209 int64_t parentId;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2210
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2211 if (type == ResourceType_Patient || // Cannot further go up in hierarchy
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2212 !db_.LookupParent(parentId, id))
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2213 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2214 return false;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2215 }
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2216
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2217 id = parentId;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2218 type = GetParentResourceType(type);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2219 }
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2220
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2221 target = db_.GetPublicId(id);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2222 return true;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2223 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2224 }