Mercurial > hg > orthanc

annotate OrthancServer/DicomInstanceToStore.cpp @ 2189:c4b3259c8bce

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New metadata automatically computed at the instance level: "TransferSyntax"
author Sebastien Jodogne <s.jodogne@gmail.com>
date Tue, 29 Nov 2016 16:07:14 +0100
parents bb199bccdc45
children a3a65de1840f
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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31
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32
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33 #include "PrecompiledHeadersServer.h"
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34 #include "DicomInstanceToStore.h"
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35
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36 #include "FromDcmtkBridge.h"
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37 #include "OrthancInitialization.h"
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38 #include "../Core/Logging.h"
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39
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40 #include <dcmtk/dcmdata/dcfilefo.h>
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41 #include <dcmtk/dcmdata/dcdeftag.h>
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42
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43
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44 namespace Orthanc
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45 {
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46 void DicomInstanceToStore::AddMetadata(ResourceType level,
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47 MetadataType metadata,
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48 const std::string& value)
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49 {
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50 metadata_[std::make_pair(level, metadata)] = value;
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51 }
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52
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53
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54 void DicomInstanceToStore::ComputeMissingInformation()
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55 {
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56 if (buffer_.HasContent() &&
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57 summary_.HasContent() &&
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58 json_.HasContent())
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59 {
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60 // Fine, everything is available
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61 return;
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62 }
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63
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64 if (!buffer_.HasContent())
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65 {
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66 if (!parsed_.HasContent())
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67 {
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68 if (!summary_.HasContent())
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69 {
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70 throw OrthancException(ErrorCode_NotImplemented);
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71 }
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72 else
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73 {
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74 parsed_.TakeOwnership(new ParsedDicomFile(summary_.GetConstContent()));
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75 }
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76 }
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77
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78 // Serialize the parsed DICOM file
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79 buffer_.Allocate();
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80 if (!FromDcmtkBridge::SaveToMemoryBuffer(buffer_.GetContent(),
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81 *parsed_.GetContent().GetDcmtkObject().getDataset()))
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82 {
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83 LOG(ERROR) << "Unable to serialize a DICOM file to a memory buffer";
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84 throw OrthancException(ErrorCode_InternalError);
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85 }
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86 }
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87
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88 if (summary_.HasContent() &&
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89 json_.HasContent())
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90 {
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91 return;
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92 }
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93
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94 // At this point, we know that the DICOM file is available as a
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95 // memory buffer, but that its summary or its JSON version is
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96 // missing
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97
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98 if (!parsed_.HasContent())
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99 {
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100 parsed_.TakeOwnership(new ParsedDicomFile(buffer_.GetConstContent()));
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101 }
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102
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103 // At this point, we have parsed the DICOM file
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104
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105 if (!summary_.HasContent())
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106 {
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107 summary_.Allocate();
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108 Configuration::ExtractDicomSummary(summary_.GetContent(),
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109 *parsed_.GetContent().GetDcmtkObject().getDataset());
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110 }
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111
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112 if (!json_.HasContent())
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113 {
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114 json_.Allocate();
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115 Configuration::ExtractDicomAsJson(json_.GetContent(),
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116 *parsed_.GetContent().GetDcmtkObject().getDataset());
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117 }
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118 }
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119
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120
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121
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122 const char* DicomInstanceToStore::GetBufferData()
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123 {
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124 ComputeMissingInformation();
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125
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126 if (!buffer_.HasContent())
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127 {
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128 throw OrthancException(ErrorCode_InternalError);
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129 }
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130
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131 if (buffer_.GetConstContent().size() == 0)
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132 {
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133 return NULL;
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134 }
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135 else
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136 {
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137 return buffer_.GetConstContent().c_str();
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138 }
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diff changeset
139 }
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140
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141
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142 size_t DicomInstanceToStore::GetBufferSize()
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143 {
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144 ComputeMissingInformation();
1004
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parents: 1003
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145
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diff changeset
146 if (!buffer_.HasContent())
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147 {
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148 throw OrthancException(ErrorCode_InternalError);
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diff changeset
149 }
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150
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151 return buffer_.GetConstContent().size();
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152 }
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153
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154
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155 const DicomMap& DicomInstanceToStore::GetSummary()
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156 {
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157 ComputeMissingInformation();
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158
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diff changeset
159 if (!summary_.HasContent())
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160 {
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161 throw OrthancException(ErrorCode_InternalError);
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162 }
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parents: 1003
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163
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164 return summary_.GetConstContent();
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165 }
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parents: 1003
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166
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167
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168 const Json::Value& DicomInstanceToStore::GetJson()
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169 {
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170 ComputeMissingInformation();
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171
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172 if (!json_.HasContent())
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173 {
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174 throw OrthancException(ErrorCode_InternalError);
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175 }
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176
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177 return json_.GetConstContent();
1003
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178 }
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179
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180
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181
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182 void DicomInstanceToStore::GetOriginInformation(Json::Value& result) const
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183 {
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184 result = Json::objectValue;
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185 result["RequestOrigin"] = EnumerationToString(origin_);
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186
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187 switch (origin_)
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188 {
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189 case RequestOrigin_Unknown:
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190 {
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191 // None of the methods "SetDicomProtocolOrigin()", "SetHttpOrigin()",
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192 // "SetLuaOrigin()" or "SetPluginsOrigin()" was called!
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193 throw OrthancException(ErrorCode_BadSequenceOfCalls);
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194 }
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195
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196 case RequestOrigin_DicomProtocol:
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197 {
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198 result["RemoteIp"] = remoteIp_;
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199 result["RemoteAet"] = dicomRemoteAet_;
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200 result["CalledAet"] = dicomCalledAet_;
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201 break;
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202 }
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203
1823
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diff changeset
204 case RequestOrigin_RestApi:
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205 {
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diff changeset
206 result["RemoteIp"] = remoteIp_;
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207 result["Username"] = httpUsername_;
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208 break;
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209 }
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210
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211 case RequestOrigin_Lua:
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212 case RequestOrigin_Plugins:
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213 {
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214 // No additional information available for these kinds of requests
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diff changeset
215 break;
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diff changeset
216 }
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217
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diff changeset
218 default:
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diff changeset
219 throw OrthancException(ErrorCode_InternalError);
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diff changeset
220 }
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diff changeset
221 }
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parents: 1486
diff changeset
222
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diff changeset
223
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diff changeset
224 void DicomInstanceToStore::SetDicomProtocolOrigin(const char* remoteIp,
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diff changeset
225 const char* remoteAet,
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diff changeset
226 const char* calledAet)
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diff changeset
227 {
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diff changeset
228 origin_ = RequestOrigin_DicomProtocol;
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diff changeset
229 remoteIp_ = remoteIp;
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diff changeset
230 dicomRemoteAet_ = remoteAet;
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parents: 1486
diff changeset
231 dicomCalledAet_ = calledAet;
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diff changeset
232 }
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diff changeset
233
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diff changeset
234 void DicomInstanceToStore::SetRestOrigin(const RestApiCall& call)
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diff changeset
235 {
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diff changeset
236 origin_ = call.GetRequestOrigin();
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diff changeset
237
1823
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parents: 1822
diff changeset
238 if (origin_ == RequestOrigin_RestApi)
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diff changeset
239 {
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diff changeset
240 remoteIp_ = call.GetRemoteIp();
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diff changeset
241 httpUsername_ = call.GetUsername();
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diff changeset
242 }
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diff changeset
243 }
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diff changeset
244
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diff changeset
245 void DicomInstanceToStore::SetHttpOrigin(const char* remoteIp,
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diff changeset
246 const char* username)
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diff changeset
247 {
1823
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diff changeset
248 origin_ = RequestOrigin_RestApi;
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diff changeset
249 remoteIp_ = remoteIp;
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diff changeset
250 httpUsername_ = username;
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diff changeset
251 }
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diff changeset
252
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diff changeset
253 void DicomInstanceToStore::SetLuaOrigin()
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diff changeset
254 {
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diff changeset
255 origin_ = RequestOrigin_Lua;
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diff changeset
256 }
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diff changeset
257
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diff changeset
258 void DicomInstanceToStore::SetPluginsOrigin()
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diff changeset
259 {
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diff changeset
260 origin_ = RequestOrigin_Plugins;
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diff changeset
261 }
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diff changeset
262
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diff changeset
263 const char* DicomInstanceToStore::GetRemoteAet() const
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diff changeset
264 {
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diff changeset
265 if (origin_ == RequestOrigin_DicomProtocol)
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diff changeset
266 {
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diff changeset
267 return dicomRemoteAet_.c_str();
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diff changeset
268 }
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diff changeset
269 else
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270 {
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271 return "";
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272 }
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273 }
2189
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274
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275
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276 bool DicomInstanceToStore::LookupTransferSyntax(std::string& result)
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277 {
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278 ComputeMissingInformation();
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279
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280 DicomMap header;
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281 if (DicomMap::ParseDicomMetaInformation(header, GetBufferData(), GetBufferSize()))
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282 {
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283 const DicomValue* value = header.TestAndGetValue(DICOM_TAG_TRANSFER_SYNTAX_UID);
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284 if (value != NULL &&
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285 !value->IsBinary() &&
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286 !value->IsNull())
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287 {
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288 result = Toolbox::StripSpaces(value->GetContent());
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289 return true;
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290 }
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291 }
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292
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293 return false;
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294 }
1003
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295 }