Mercurial > hg > orthanc
annotate OrthancFramework/Sources/DicomFormat/DicomTag.cpp @ 4119:bf7b9edf6b81 framework-lgpl
re-licensing the OrthancFramework to LGPL, in order to license Stone of Orthanc under LGPL
| author | Sebastien Jodogne <s.jodogne@gmail.com> |
|---|---|
| date | Tue, 07 Jul 2020 19:17:56 +0200 |
| parents | d25f4c0fa160 |
| children | 8e069a7e1c11 |
| rev | line source |
|---|---|
| 0 | 1 /** |
| 59 | 2 * Orthanc - A Lightweight, RESTful DICOM Store |
| 1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
| 0 | 6 * |
| 7 * This program is free software: you can redistribute it and/or | |
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8 * modify it under the terms of the GNU Lesser General Public License |
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9 * as published by the Free Software Foundation, either version 3 of |
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10 * the License, or (at your option) any later version. |
| 136 | 11 * |
| 0 | 12 * This program is distributed in the hope that it will be useful, but |
| 13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
| 14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
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15 * Lesser General Public License for more details. |
| 0 | 16 * |
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17 * You should have received a copy of the GNU Lesser General Public |
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18 * License along with this program. If not, see |
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19 * <http://www.gnu.org/licenses/>. |
| 0 | 20 **/ |
| 21 | |
| 22 | |
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23 #include "../PrecompiledHeaders.h" |
| 0 | 24 #include "DicomTag.h" |
| 25 | |
| 59 | 26 #include "../OrthancException.h" |
| 0 | 27 |
| 28 #include <iostream> | |
| 29 #include <iomanip> | |
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30 #include <stdio.h> |
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31 #include <string.h> |
| 0 | 32 |
| 59 | 33 namespace Orthanc |
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34 { |
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35 static inline uint16_t GetCharValue(char c) |
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36 { |
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37 if (c >= '0' && c <= '9') |
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38 return c - '0'; |
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39 else if (c >= 'a' && c <= 'f') |
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40 return c - 'a' + 10; |
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41 else if (c >= 'A' && c <= 'F') |
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42 return c - 'A' + 10; |
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43 else |
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44 return 0; |
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45 } |
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46 |
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47 |
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48 static inline uint16_t GetTagValue(const char* c) |
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49 { |
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50 return ((GetCharValue(c[0]) << 12) + |
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51 (GetCharValue(c[1]) << 8) + |
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52 (GetCharValue(c[2]) << 4) + |
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53 GetCharValue(c[3])); |
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54 } |
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55 |
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56 |
| 0 | 57 bool DicomTag::operator< (const DicomTag& other) const |
| 58 { | |
| 59 if (group_ < other.group_) | |
| 60 return true; | |
| 61 | |
| 62 if (group_ > other.group_) | |
| 63 return false; | |
| 64 | |
| 65 return element_ < other.element_; | |
| 66 } | |
| 67 | |
| 68 | |
| 69 std::ostream& operator<< (std::ostream& o, const DicomTag& tag) | |
| 70 { | |
| 71 using namespace std; | |
| 72 ios_base::fmtflags state = o.flags(); | |
| 73 o.flags(ios::right | ios::hex); | |
| 74 o << "(" << setfill('0') << setw(4) << tag.GetGroup() | |
| 75 << "," << setw(4) << tag.GetElement() << ")"; | |
| 76 o.flags(state); | |
| 77 return o; | |
| 78 } | |
| 79 | |
| 80 | |
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81 std::string DicomTag::Format() const |
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82 { |
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83 char b[16]; |
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84 sprintf(b, "%04x,%04x", group_, element_); |
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85 return std::string(b); |
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86 } |
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87 |
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88 |
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89 bool DicomTag::ParseHexadecimal(DicomTag& tag, |
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90 const char* value) |
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91 { |
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92 size_t length = strlen(value); |
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93 |
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94 if (length == 9 && |
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95 isxdigit(value[0]) && |
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96 isxdigit(value[1]) && |
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97 isxdigit(value[2]) && |
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98 isxdigit(value[3]) && |
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99 (value[4] == '-' || value[4] == ',') && |
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100 isxdigit(value[5]) && |
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101 isxdigit(value[6]) && |
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102 isxdigit(value[7]) && |
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103 isxdigit(value[8])) |
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104 { |
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105 uint16_t group = GetTagValue(value); |
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106 uint16_t element = GetTagValue(value + 5); |
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107 tag = DicomTag(group, element); |
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108 return true; |
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109 } |
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110 else if (length == 8 && |
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111 isxdigit(value[0]) && |
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112 isxdigit(value[1]) && |
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113 isxdigit(value[2]) && |
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114 isxdigit(value[3]) && |
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115 isxdigit(value[4]) && |
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116 isxdigit(value[5]) && |
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117 isxdigit(value[6]) && |
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118 isxdigit(value[7])) |
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119 { |
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120 uint16_t group = GetTagValue(value); |
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121 uint16_t element = GetTagValue(value + 4); |
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122 tag = DicomTag(group, element); |
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123 return true; |
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124 } |
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125 else |
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126 { |
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127 return false; |
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128 } |
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129 } |
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130 |
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131 |
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132 const char* DicomTag::GetMainTagsName() const |
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133 { |
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134 if (*this == DICOM_TAG_ACCESSION_NUMBER) |
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135 return "AccessionNumber"; |
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136 |
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137 if (*this == DICOM_TAG_SOP_INSTANCE_UID) |
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138 return "SOPInstanceUID"; |
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139 |
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140 if (*this == DICOM_TAG_PATIENT_ID) |
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141 return "PatientID"; |
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142 |
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143 if (*this == DICOM_TAG_SERIES_INSTANCE_UID) |
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144 return "SeriesInstanceUID"; |
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145 |
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146 if (*this == DICOM_TAG_STUDY_INSTANCE_UID) |
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147 return "StudyInstanceUID"; |
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148 |
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149 if (*this == DICOM_TAG_PIXEL_DATA) |
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150 return "PixelData"; |
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151 |
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152 if (*this == DICOM_TAG_IMAGE_INDEX) |
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153 return "ImageIndex"; |
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154 |
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155 if (*this == DICOM_TAG_INSTANCE_NUMBER) |
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156 return "InstanceNumber"; |
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157 |
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158 if (*this == DICOM_TAG_NUMBER_OF_SLICES) |
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159 return "NumberOfSlices"; |
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160 |
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161 if (*this == DICOM_TAG_NUMBER_OF_FRAMES) |
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162 return "NumberOfFrames"; |
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163 |
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164 if (*this == DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES) |
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165 return "CardiacNumberOfImages"; |
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166 |
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167 if (*this == DICOM_TAG_IMAGES_IN_ACQUISITION) |
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168 return "ImagesInAcquisition"; |
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169 |
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170 if (*this == DICOM_TAG_PATIENT_NAME) |
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171 return "PatientName"; |
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172 |
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173 if (*this == DICOM_TAG_IMAGE_POSITION_PATIENT) |
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174 return "ImagePositionPatient"; |
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175 |
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176 if (*this == DICOM_TAG_IMAGE_ORIENTATION_PATIENT) |
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177 return "ImageOrientationPatient"; |
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178 |
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179 // New in Orthanc 1.6.0, as tagged as "RETIRED_" since DCMTK 3.6.4 |
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180 if (*this == DICOM_TAG_OTHER_PATIENT_IDS) |
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181 return "OtherPatientIDs"; |
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182 |
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183 return ""; |
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184 } |
| 961 | 185 |
| 186 | |
| 1368 | 187 void DicomTag::AddTagsForModule(std::set<DicomTag>& target, |
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188 DicomModule module) |
| 961 | 189 { |
| 190 // REFERENCE: 11_03pu.pdf, DICOM PS 3.3 2011 - Information Object Definitions | |
| 191 | |
| 192 switch (module) | |
| 193 { | |
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194 case DicomModule_Patient: |
| 961 | 195 // This is Table C.7-1 "Patient Module Attributes" (p. 373) |
| 196 target.insert(DicomTag(0x0010, 0x0010)); // Patient's name | |
| 197 target.insert(DicomTag(0x0010, 0x0020)); // Patient ID | |
| 198 target.insert(DicomTag(0x0010, 0x0030)); // Patient's birth date | |
| 199 target.insert(DicomTag(0x0010, 0x0040)); // Patient's sex | |
| 200 target.insert(DicomTag(0x0008, 0x1120)); // Referenced patient sequence | |
| 201 target.insert(DicomTag(0x0010, 0x0032)); // Patient's birth time | |
| 202 target.insert(DicomTag(0x0010, 0x1000)); // Other patient IDs | |
| 203 target.insert(DicomTag(0x0010, 0x1002)); // Other patient IDs sequence | |
| 204 target.insert(DicomTag(0x0010, 0x1001)); // Other patient names | |
| 205 target.insert(DicomTag(0x0010, 0x2160)); // Ethnic group | |
| 206 target.insert(DicomTag(0x0010, 0x4000)); // Patient comments | |
| 207 target.insert(DicomTag(0x0010, 0x2201)); // Patient species description | |
| 208 target.insert(DicomTag(0x0010, 0x2202)); // Patient species code sequence | |
| 209 target.insert(DicomTag(0x0010, 0x2292)); // Patient breed description | |
| 210 target.insert(DicomTag(0x0010, 0x2293)); // Patient breed code sequence | |
| 211 target.insert(DicomTag(0x0010, 0x2294)); // Breed registration sequence | |
| 212 target.insert(DicomTag(0x0010, 0x2297)); // Responsible person | |
| 213 target.insert(DicomTag(0x0010, 0x2298)); // Responsible person role | |
| 214 target.insert(DicomTag(0x0010, 0x2299)); // Responsible organization | |
| 215 target.insert(DicomTag(0x0012, 0x0062)); // Patient identity removed | |
| 216 target.insert(DicomTag(0x0012, 0x0063)); // De-identification method | |
| 217 target.insert(DicomTag(0x0012, 0x0064)); // De-identification method code sequence | |
| 218 | |
| 219 // Table 10-18 ISSUER OF PATIENT ID MACRO (p. 112) | |
| 220 target.insert(DicomTag(0x0010, 0x0021)); // Issuer of Patient ID | |
| 221 target.insert(DicomTag(0x0010, 0x0024)); // Issuer of Patient ID qualifiers sequence | |
| 222 break; | |
| 223 | |
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224 case DicomModule_Study: |
| 961 | 225 // This is Table C.7-3 "General Study Module Attributes" (p. 378) |
| 226 target.insert(DicomTag(0x0020, 0x000d)); // Study instance UID | |
| 227 target.insert(DicomTag(0x0008, 0x0020)); // Study date | |
| 228 target.insert(DicomTag(0x0008, 0x0030)); // Study time | |
| 229 target.insert(DicomTag(0x0008, 0x0090)); // Referring physician's name | |
| 230 target.insert(DicomTag(0x0008, 0x0096)); // Referring physician identification sequence | |
| 231 target.insert(DicomTag(0x0020, 0x0010)); // Study ID | |
| 232 target.insert(DicomTag(0x0008, 0x0050)); // Accession number | |
| 233 target.insert(DicomTag(0x0008, 0x0051)); // Issuer of accession number sequence | |
| 234 target.insert(DicomTag(0x0008, 0x1030)); // Study description | |
| 235 target.insert(DicomTag(0x0008, 0x1048)); // Physician(s) of record | |
| 236 target.insert(DicomTag(0x0008, 0x1049)); // Physician(s) of record identification sequence | |
| 237 target.insert(DicomTag(0x0008, 0x1060)); // Name of physician(s) reading study | |
| 238 target.insert(DicomTag(0x0008, 0x1062)); // Physician(s) reading study identification sequence | |
| 239 target.insert(DicomTag(0x0032, 0x1034)); // Requesting service code sequence | |
| 240 target.insert(DicomTag(0x0008, 0x1110)); // Referenced study sequence | |
| 241 target.insert(DicomTag(0x0008, 0x1032)); // Procedure code sequence | |
| 242 target.insert(DicomTag(0x0040, 0x1012)); // Reason for performed procedure code sequence | |
| 243 break; | |
| 244 | |
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245 case DicomModule_Series: |
| 961 | 246 // This is Table C.7-5 "General Series Module Attributes" (p. 385) |
| 962 | 247 target.insert(DicomTag(0x0008, 0x0060)); // Modality |
| 248 target.insert(DicomTag(0x0020, 0x000e)); // Series Instance UID | |
| 249 target.insert(DicomTag(0x0020, 0x0011)); // Series Number | |
| 250 target.insert(DicomTag(0x0020, 0x0060)); // Laterality | |
| 251 target.insert(DicomTag(0x0008, 0x0021)); // Series Date | |
| 252 target.insert(DicomTag(0x0008, 0x0031)); // Series Time | |
| 253 target.insert(DicomTag(0x0008, 0x1050)); // Performing Physicians’ Name | |
| 254 target.insert(DicomTag(0x0008, 0x1052)); // Performing Physician Identification Sequence | |
| 255 target.insert(DicomTag(0x0018, 0x1030)); // Protocol Name | |
| 256 target.insert(DicomTag(0x0008, 0x103e)); // Series Description | |
| 257 target.insert(DicomTag(0x0008, 0x103f)); // Series Description Code Sequence | |
| 258 target.insert(DicomTag(0x0008, 0x1070)); // Operators' Name | |
| 259 target.insert(DicomTag(0x0008, 0x1072)); // Operator Identification Sequence | |
| 260 target.insert(DicomTag(0x0008, 0x1111)); // Referenced Performed Procedure Step Sequence | |
| 261 target.insert(DicomTag(0x0008, 0x1250)); // Related Series Sequence | |
| 262 target.insert(DicomTag(0x0018, 0x0015)); // Body Part Examined | |
| 263 target.insert(DicomTag(0x0018, 0x5100)); // Patient Position | |
| 264 target.insert(DicomTag(0x0028, 0x0108)); // Smallest Pixel Value in Series | |
| 265 target.insert(DicomTag(0x0029, 0x0109)); // Largest Pixel Value in Series | |
| 266 target.insert(DicomTag(0x0040, 0x0275)); // Request Attributes Sequence | |
| 267 target.insert(DicomTag(0x0010, 0x2210)); // Anatomical Orientation Type | |
| 268 | |
| 269 // Table 10-16 PERFORMED PROCEDURE STEP SUMMARY MACRO ATTRIBUTES | |
| 270 target.insert(DicomTag(0x0040, 0x0253)); // Performed Procedure Step ID | |
| 271 target.insert(DicomTag(0x0040, 0x0244)); // Performed Procedure Step Start Date | |
| 272 target.insert(DicomTag(0x0040, 0x0245)); // Performed Procedure Step Start Time | |
| 273 target.insert(DicomTag(0x0040, 0x0254)); // Performed Procedure Step Description | |
| 274 target.insert(DicomTag(0x0040, 0x0260)); // Performed Protocol Code Sequence | |
| 275 target.insert(DicomTag(0x0040, 0x0280)); // Comments on the Performed Procedure Step | |
| 961 | 276 break; |
| 277 | |
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278 case DicomModule_Instance: |
| 961 | 279 // This is Table C.12-1 "SOP Common Module Attributes" (p. 1207) |
| 962 | 280 target.insert(DicomTag(0x0008, 0x0016)); // SOP Class UID |
| 281 target.insert(DicomTag(0x0008, 0x0018)); // SOP Instance UID | |
| 282 target.insert(DicomTag(0x0008, 0x0005)); // Specific Character Set | |
| 283 target.insert(DicomTag(0x0008, 0x0012)); // Instance Creation Date | |
| 284 target.insert(DicomTag(0x0008, 0x0013)); // Instance Creation Time | |
| 285 target.insert(DicomTag(0x0008, 0x0014)); // Instance Creator UID | |
| 286 target.insert(DicomTag(0x0008, 0x001a)); // Related General SOP Class UID | |
| 287 target.insert(DicomTag(0x0008, 0x001b)); // Original Specialized SOP Class UID | |
| 288 target.insert(DicomTag(0x0008, 0x0110)); // Coding Scheme Identification Sequence | |
| 289 target.insert(DicomTag(0x0008, 0x0201)); // Timezone Offset From UTC | |
| 290 target.insert(DicomTag(0x0018, 0xa001)); // Contributing Equipment Sequence | |
| 291 target.insert(DicomTag(0x0020, 0x0013)); // Instance Number | |
| 292 target.insert(DicomTag(0x0100, 0x0410)); // SOP Instance Status | |
| 293 target.insert(DicomTag(0x0100, 0x0420)); // SOP Authorization DateTime | |
| 294 target.insert(DicomTag(0x0100, 0x0424)); // SOP Authorization Comment | |
| 295 target.insert(DicomTag(0x0100, 0x0426)); // Authorization Equipment Certification Number | |
| 296 target.insert(DicomTag(0x0400, 0x0500)); // Encrypted Attributes Sequence | |
| 297 target.insert(DicomTag(0x0400, 0x0561)); // Original Attributes Sequence | |
| 298 target.insert(DicomTag(0x0040, 0xa390)); // HL7 Structured Document Reference Sequence | |
| 299 target.insert(DicomTag(0x0028, 0x0303)); // Longitudinal Temporal Information Modified | |
| 300 | |
| 301 // Table C.12-6 "DIGITAL SIGNATURES MACRO ATTRIBUTES" (p. 1216) | |
| 302 target.insert(DicomTag(0x4ffe, 0x0001)); // MAC Parameters sequence | |
| 303 target.insert(DicomTag(0xfffa, 0xfffa)); // Digital signatures sequence | |
| 961 | 304 break; |
| 305 | |
| 962 | 306 // TODO IMAGE MODULE? |
| 307 | |
| 961 | 308 default: |
| 309 throw OrthancException(ErrorCode_ParameterOutOfRange); | |
| 310 } | |
| 311 } | |
| 0 | 312 } |