Mercurial > hg > orthanc

annotate OrthancServer/ServerIndex.cpp @ 2943:9f6716008066

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
merge
author am@osimis.io
date Thu, 29 Nov 2018 15:26:47 +0100
parents 4767d36679ed
children 96089d1aba4d
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
62
a70bb32802ae renaming Server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
2 * Orthanc - A Lightweight, RESTful DICOM Store
1900
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1898
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288
6e7e5ed91c2d upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1286
diff changeset
4 * Department, University Hospital of Liege, Belgium
2447
878b59270859 upgrade to year 2018
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2382
diff changeset
5 * Copyright (C) 2017-2018 Osimis S.A., Belgium
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
6 *
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 * This program is free software: you can redistribute it and/or
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
8 * modify it under the terms of the GNU General Public License as
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 * published by the Free Software Foundation, either version 3 of the
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 * License, or (at your option) any later version.
136
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
11 *
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
12 * In addition, as a special exception, the copyright holders of this
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
13 * program give permission to link the code of its release with the
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
15 * that use the same license as the "OpenSSL" library), and distribute
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
16 * the linked executables. You must obey the GNU General Public License
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
17 * in all respects for all of the code used other than "OpenSSL". If you
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
18 * modify file(s) with this exception, you may extend this exception to
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
19 * your version of the file(s), but you are not obligated to do so. If
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
20 * you do not wish to do so, delete this exception statement from your
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
21 * version. If you delete this exception statement from all source files
fe180eae201d openssl exception
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 108
diff changeset
22 * in the program, then also delete it here.
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23 *
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24 * This program is distributed in the hope that it will be useful, but
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25 * WITHOUT ANY WARRANTY; without even the implied warranty of
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
27 * General Public License for more details.
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 *
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29 * You should have received a copy of the GNU General Public License
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31 **/
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
33
831
84513f2ee1f3 pch for unit tests and server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 824
diff changeset
34 #include "PrecompiledHeadersServer.h"
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35 #include "ServerIndex.h"
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36
6
9d483cf71d17 fix warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
37 #ifndef NOMINMAX
2
67a6978503b7 fixing Windows build
Jodogne@Laptop
parents: 0
diff changeset
38 #define NOMINMAX
6
9d483cf71d17 fix warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
39 #endif
9d483cf71d17 fix warnings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2
diff changeset
40
1198
1169528a9a5f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1196
diff changeset
41 #include "ServerIndexChange.h"
8
3a584803783e build with visual studio
jodogne
parents: 6
diff changeset
42 #include "EmbeddedResources.h"
2940
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
43 #include "OrthancConfiguration.h"
2382
7284093111b0 big reorganization to cleanly separate framework vs. server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
44 #include "../Core/DicomParsing/ParsedDicomFile.h"
1668
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
45 #include "ServerToolbox.h"
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
46 #include "../Core/Toolbox.h"
1486
f967bdf8534e refactoring to Logging.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1453
diff changeset
47 #include "../Core/Logging.h"
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
48 #include "../Core/DicomFormat/DicomArray.h"
1486
f967bdf8534e refactoring to Logging.h
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1453
diff changeset
49
2382
7284093111b0 big reorganization to cleanly separate framework vs. server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2244
diff changeset
50 #include "../Core/DicomParsing/FromDcmtkBridge.h"
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
51 #include "ServerContext.h"
1822
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
52 #include "DicomInstanceToStore.h"
2122
2ecc95a239f7 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
53 #include "Search/LookupResource.h"
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
54
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
55 #include <boost/lexical_cast.hpp>
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
56 #include <stdio.h>
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
57
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
58 static const uint64_t MEGA_BYTES = 1024 * 1024;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
59
62
a70bb32802ae renaming Server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
60 namespace Orthanc
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
61 {
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
62 class ServerIndex::Listener : public IDatabaseListener
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
63 {
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
64 private:
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
65 struct FileToRemove
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
66 {
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
67 private:
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
68 std::string uuid_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
69 FileContentType type_;
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
70
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
71 public:
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
72 FileToRemove(const FileInfo& info) : uuid_(info.GetUuid()),
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
73 type_(info.GetContentType())
1191
d49505e377e3 demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
74 {
d49505e377e3 demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
75 }
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
76
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
77 const std::string& GetUuid() const
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
78 {
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
79 return uuid_;
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
80 }
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
81
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
82 FileContentType GetContentType() const
264
5b8e8b74bc8b remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 240
diff changeset
83 {
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
84 return type_;
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
85 }
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
86 };
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
87
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
88 ServerContext& context_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
89 bool hasRemainingLevel_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
90 ResourceType remainingType_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
91 std::string remainingPublicId_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
92 std::list<FileToRemove> pendingFilesToRemove_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
93 std::list<ServerIndexChange> pendingChanges_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
94 uint64_t sizeOfFilesToRemove_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
95 bool insideTransaction_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
96
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
97 void Reset()
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
98 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
99 sizeOfFilesToRemove_ = 0;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
100 hasRemainingLevel_ = false;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
101 pendingFilesToRemove_.clear();
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
102 pendingChanges_.clear();
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
103 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
104
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
105 public:
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
106 Listener(ServerContext& context) : context_(context),
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
107 insideTransaction_(false)
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
108 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
109 Reset();
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
110 assert(ResourceType_Patient < ResourceType_Study &&
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
111 ResourceType_Study < ResourceType_Series &&
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
112 ResourceType_Series < ResourceType_Instance);
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
113 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
114
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
115 void StartTransaction()
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
116 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
117 Reset();
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
118 insideTransaction_ = true;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
119 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
120
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
121 void EndTransaction()
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
122 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
123 insideTransaction_ = false;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
124 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
125
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
126 uint64_t GetSizeOfFilesToRemove()
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
127 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
128 return sizeOfFilesToRemove_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
129 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
130
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
131 void CommitFilesToRemove()
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
132 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
133 for (std::list<FileToRemove>::const_iterator
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
134 it = pendingFilesToRemove_.begin();
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
135 it != pendingFilesToRemove_.end(); ++it)
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1177
diff changeset
136 {
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
137 context_.RemoveFile(it->GetUuid(), it->GetContentType());
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
138 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
139 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
140
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
141 void CommitChanges()
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
142 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
143 for (std::list<ServerIndexChange>::const_iterator
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
144 it = pendingChanges_.begin();
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
145 it != pendingChanges_.end(); ++it)
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
146 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
147 context_.SignalChange(*it);
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
148 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
149 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
150
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
151 virtual void SignalRemainingAncestor(ResourceType parentType,
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
152 const std::string& publicId)
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
153 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
154 VLOG(1) << "Remaining ancestor \"" << publicId << "\" (" << parentType << ")";
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
155
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
156 if (hasRemainingLevel_)
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
157 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
158 if (parentType < remainingType_)
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1177
diff changeset
159 {
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
160 remainingType_ = parentType;
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
161 remainingPublicId_ = publicId;
1191
d49505e377e3 demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
162 }
1158
badc14fee61f speed up db
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1148
diff changeset
163 }
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
164 else
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
165 {
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
166 hasRemainingLevel_ = true;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
167 remainingType_ = parentType;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
168 remainingPublicId_ = publicId;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
169 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
170 }
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
171
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
172 virtual void SignalFileDeleted(const FileInfo& info)
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
173 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
174 assert(Toolbox::IsUuid(info.GetUuid()));
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
175 pendingFilesToRemove_.push_back(FileToRemove(info));
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
176 sizeOfFilesToRemove_ += info.GetCompressedSize();
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
177 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
178
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
179 virtual void SignalChange(const ServerIndexChange& change)
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
180 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
181 VLOG(1) << "Change related to resource " << change.GetPublicId() << " of type "
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
182 << EnumerationToString(change.GetResourceType()) << ": "
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
183 << EnumerationToString(change.GetChangeType());
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
184
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
185 if (insideTransaction_)
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
186 {
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
187 pendingChanges_.push_back(change);
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
188 }
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
189 else
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
190 {
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
191 context_.SignalChange(change);
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
192 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
193 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
194
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
195 bool HasRemainingLevel() const
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
196 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
197 return hasRemainingLevel_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
198 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
199
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
200 ResourceType GetRemainingType() const
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
201 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
202 assert(HasRemainingLevel());
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
203 return remainingType_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
204 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
205
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
206 const std::string& GetRemainingPublicId() const
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
207 {
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
208 assert(HasRemainingLevel());
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
209 return remainingPublicId_;
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
210 }
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
211 };
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
212
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
213
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
214 class ServerIndex::Transaction
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
215 {
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
216 private:
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
217 ServerIndex& index_;
1235
9b4977e3c19d abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1218
diff changeset
218 std::auto_ptr<SQLite::ITransaction> transaction_;
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
219 bool isCommitted_;
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
220
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
221 public:
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
222 Transaction(ServerIndex& index) :
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
223 index_(index),
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
224 isCommitted_(false)
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
225 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
226 transaction_.reset(index_.db_.StartTransaction());
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
227 transaction_->Begin();
1191
d49505e377e3 demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
228
1270
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1249
diff changeset
229 assert(index_.currentStorageSize_ == index_.db_.GetTotalCompressedSize());
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1249
diff changeset
230
1191
d49505e377e3 demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
231 index_.listener_->StartTransaction();
d49505e377e3 demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
232 }
d49505e377e3 demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
233
d49505e377e3 demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
234 ~Transaction()
d49505e377e3 demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
235 {
d49505e377e3 demo of OnChangeCallback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1189
diff changeset
236 index_.listener_->EndTransaction();
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
237
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
238 if (!isCommitted_)
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
239 {
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
240 transaction_->Rollback();
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
241 }
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
242 }
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
243
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
244 void Commit(uint64_t sizeOfAddedFiles)
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
245 {
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
246 if (!isCommitted_)
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
247 {
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
248 transaction_->Commit();
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
249
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
250 // We can remove the files once the SQLite transaction has
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
251 // been successfully committed. Some files might have to be
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
252 // deleted because of recycling.
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
253 index_.listener_->CommitFilesToRemove();
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
254
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
255 index_.currentStorageSize_ += sizeOfAddedFiles;
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
256
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
257 assert(index_.currentStorageSize_ >= index_.listener_->GetSizeOfFilesToRemove());
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
258 index_.currentStorageSize_ -= index_.listener_->GetSizeOfFilesToRemove();
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
259
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1177
diff changeset
260 // Send all the pending changes to the Orthanc plugins
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1177
diff changeset
261 index_.listener_->CommitChanges();
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1177
diff changeset
262
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
263 isCommitted_ = true;
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
264 }
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
265 }
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
266 };
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
267
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
268
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
269 class ServerIndex::UnstableResourcePayload
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
270 {
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
271 private:
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
272 ResourceType type_;
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
273 std::string publicId_;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
274 boost::posix_time::ptime time_;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
275
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
276 public:
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
277 UnstableResourcePayload() : type_(ResourceType_Instance)
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
278 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
279 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
280
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
281 UnstableResourcePayload(Orthanc::ResourceType type,
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
282 const std::string& publicId) :
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
283 type_(type),
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
284 publicId_(publicId)
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
285 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
286 time_ = boost::posix_time::second_clock::local_time();
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
287 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
288
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
289 unsigned int GetAge() const
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
290 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
291 return (boost::posix_time::second_clock::local_time() - time_).total_seconds();
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
292 }
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
293
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
294 ResourceType GetResourceType() const
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
295 {
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
296 return type_;
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
297 }
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
298
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
299 const std::string& GetPublicId() const
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
300 {
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
301 return publicId_;
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
302 }
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
303 };
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
304
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
305
212
f276b175dcaf delete resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 206
diff changeset
306 bool ServerIndex::DeleteResource(Json::Value& target,
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
307 const std::string& uuid,
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
308 ResourceType expectedType)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
309 {
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
310 boost::mutex::scoped_lock lock(mutex_);
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
311
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
312 Transaction t(*this);
201
bee20e978835 refactoring of delete
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 200
diff changeset
313
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
314 int64_t id;
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
315 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
316 if (!db_.LookupResource(id, type, uuid) ||
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
317 expectedType != type)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
318 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
319 return false;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
320 }
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
321
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
322 db_.DeleteResource(id);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
323
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
324 if (listener_->HasRemainingLevel())
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
325 {
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
326 ResourceType type = listener_->GetRemainingType();
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
327 const std::string& uuid = listener_->GetRemainingPublicId();
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
328
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
329 target["RemainingAncestor"] = Json::Value(Json::objectValue);
204
7f4acf490179 changes api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 202
diff changeset
330 target["RemainingAncestor"]["Path"] = GetBasePath(type, uuid);
434
ccf3a0a43dac EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
331 target["RemainingAncestor"]["Type"] = EnumerationToString(type);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
332 target["RemainingAncestor"]["ID"] = uuid;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
333 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
334 else
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
335 {
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
336 target["RemainingAncestor"] = Json::nullValue;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
337 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
338
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
339 t.Commit(0);
264
5b8e8b74bc8b remove files only after the sqlite transaction has succeeded
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 240
diff changeset
340
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
341 return true;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
342 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
343
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
344
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
345 void ServerIndex::FlushThread(ServerIndex* that,
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
346 unsigned int threadSleep)
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
347 {
1102
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
348 // By default, wait for 10 seconds before flushing
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
349 unsigned int sleep = 10;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
350
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
351 try
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
352 {
744
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 739
diff changeset
353 boost::mutex::scoped_lock lock(that->mutex_);
1239
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
354 std::string sleepString;
1102
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
355
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
356 if (that->db_.LookupGlobalProperty(sleepString, GlobalProperty_FlushSleep) &&
1239
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
357 Toolbox::IsInteger(sleepString))
1102
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
358 {
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
359 sleep = boost::lexical_cast<unsigned int>(sleepString);
ce6386b37afd avoid unnecessary exceptions on Orthanc startup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1006
diff changeset
360 }
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
361 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
362 catch (boost::bad_lexical_cast&)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
363 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
364 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
365
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
366 LOG(INFO) << "Starting the database flushing thread (sleep = " << sleep << ")";
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
367
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
368 unsigned int count = 0;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
369
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
370 while (!that->done_)
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
371 {
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
372 boost::this_thread::sleep(boost::posix_time::milliseconds(threadSleep));
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
373 count++;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
374 if (count < sleep)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
375 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
376 continue;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
377 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
378
2217
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
379 Logging::Flush();
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2209
diff changeset
380
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
381 boost::mutex::scoped_lock lock(that->mutex_);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
382 that->db_.FlushToDisk();
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
383 count = 0;
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
384 }
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
385
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
386 LOG(INFO) << "Stopping the database flushing thread";
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
387 }
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
388
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
389
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
390 static void ComputeExpectedNumberOfInstances(IDatabaseWrapper& db,
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
391 int64_t series,
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
392 const DicomMap& dicomSummary)
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
393 {
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
394 try
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
395 {
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
396 const DicomValue* value;
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
397 const DicomValue* value2;
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
398
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
399 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGES_IN_ACQUISITION)) != NULL &&
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
400 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS)) != NULL)
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
401 {
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
402 // Patch for series with temporal positions thanks to Will Ryder
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
403 int64_t imagesInAcquisition = boost::lexical_cast<int64_t>(value->GetContent());
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
404 int64_t countTemporalPositions = boost::lexical_cast<int64_t>(value2->GetContent());
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
405 std::string expected = boost::lexical_cast<std::string>(imagesInAcquisition * countTemporalPositions);
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
406 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected);
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
407 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
408
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
409 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_SLICES)) != NULL &&
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
410 (value2 = dicomSummary.TestAndGetValue(DICOM_TAG_NUMBER_OF_TIME_SLICES)) != NULL)
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
411 {
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
412 // Support of Cardio-PET images
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
413 int64_t numberOfSlices = boost::lexical_cast<int64_t>(value->GetContent());
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
414 int64_t numberOfTimeSlices = boost::lexical_cast<int64_t>(value2->GetContent());
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
415 std::string expected = boost::lexical_cast<std::string>(numberOfSlices * numberOfTimeSlices);
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
416 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, expected);
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
417 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
418
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
419 else if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)) != NULL)
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
420 {
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
421 db.SetMetadata(series, MetadataType_Series_ExpectedNumberOfInstances, value->GetContent());
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
422 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
423 }
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
424 catch (OrthancException&)
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
425 {
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
426 }
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
427 catch (boost::bad_lexical_cast&)
433
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
428 {
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
429 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
430 }
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
431
aa50783f9550 cardiopet
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 432
diff changeset
432
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
433
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
434
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
435 bool ServerIndex::GetMetadataAsInteger(int64_t& result,
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
436 int64_t id,
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
437 MetadataType type)
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
438 {
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
439 std::string s;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
440 if (!db_.LookupMetadata(s, id, type))
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
441 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
442 return false;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
443 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
444
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
445 try
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
446 {
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
447 result = boost::lexical_cast<int64_t>(s);
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
448 return true;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
449 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
450 catch (boost::bad_lexical_cast&)
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
451 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
452 return false;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
453 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
454 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
455
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
456
1297
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
457 void ServerIndex::LogChange(int64_t internalId,
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
458 ChangeType changeType,
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
459 ResourceType resourceType,
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
460 const std::string& publicId)
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
461 {
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
462 ServerIndexChange change(changeType, resourceType, publicId);
1300
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
463
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
464 if (changeType <= ChangeType_INTERNAL_LastLogged)
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
465 {
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
466 db_.LogChange(internalId, change);
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
467 }
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
468
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
469 assert(listener_.get() != NULL);
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
470 listener_->SignalChange(change);
1297
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
471 }
501432928727 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1294
diff changeset
472
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
473
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
474 uint64_t ServerIndex::IncrementGlobalSequenceInternal(GlobalProperty property)
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
475 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
476 std::string oldValue;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
477
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
478 if (db_.LookupGlobalProperty(oldValue, property))
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
479 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
480 uint64_t oldNumber;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
481
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
482 try
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
483 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
484 oldNumber = boost::lexical_cast<uint64_t>(oldValue);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
485 db_.SetGlobalProperty(property, boost::lexical_cast<std::string>(oldNumber + 1));
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
486 return oldNumber + 1;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
487 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
488 catch (boost::bad_lexical_cast&)
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
489 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
490 throw OrthancException(ErrorCode_InternalError);
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
491 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
492 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
493 else
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
494 {
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
495 // Initialize the sequence at "1"
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
496 db_.SetGlobalProperty(property, "1");
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
497 return 1;
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
498 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
499 }
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
500
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
501
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
502
1299
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
503 int64_t ServerIndex::CreateResource(const std::string& publicId,
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
504 ResourceType type)
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
505 {
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
506 int64_t id = db_.CreateResource(publicId, type);
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
507
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
508 ChangeType changeType;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
509 switch (type)
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
510 {
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
511 case ResourceType_Patient:
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
512 changeType = ChangeType_NewPatient;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
513 break;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
514
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
515 case ResourceType_Study:
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
516 changeType = ChangeType_NewStudy;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
517 break;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
518
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
519 case ResourceType_Series:
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
520 changeType = ChangeType_NewSeries;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
521 break;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
522
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
523 case ResourceType_Instance:
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
524 changeType = ChangeType_NewInstance;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
525 break;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
526
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
527 default:
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
528 throw OrthancException(ErrorCode_InternalError);
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
529 }
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
530
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
531 ServerIndexChange change(changeType, type, publicId);
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
532 db_.LogChange(id, change);
1300
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
533
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
534 assert(listener_.get() != NULL);
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
535 listener_->SignalChange(change);
919dfb2fb3fe DANGEROUS refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1299
diff changeset
536
1299
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
537 return id;
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
538 }
4ce47e8ed0d2 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1297
diff changeset
539
1286
b4acdb37e43b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1271
diff changeset
540
226
8a26a8e85edf refactoring to read files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 224
diff changeset
541 ServerIndex::ServerIndex(ServerContext& context,
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
542 IDatabaseWrapper& db,
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
543 unsigned int threadSleep) :
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
544 done_(false),
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
545 db_(db),
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
546 maximumStorageSize_(0),
2826
c277e0421200 unit testing of overwriting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
547 maximumPatients_(0),
c277e0421200 unit testing of overwriting
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
548 overwrite_(false)
186
f68c039b0571 preparing refactoring of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 180
diff changeset
549 {
1432
0ac74fa21db8 rename IServerIndexListener as IDatabaseListener
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1368
diff changeset
550 listener_.reset(new Listener(context));
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
551 db_.SetListener(*listener_);
180
626777d01dc4 use of hashes to index dicom objects
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 179
diff changeset
552
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
553 currentStorageSize_ = db_.GetTotalCompressedSize();
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
554
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
555 // Initial recycling if the parameters have changed since the last
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
556 // execution of Orthanc
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
557 StandaloneRecycling();
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
558
1306
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
559 if (db.HasFlushToDisk())
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
560 {
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
561 flushThread_ = boost::thread(FlushThread, this, threadSleep);
1306
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
562 }
8cd5784a6d80 IDatabaseWrapper::HasFlushToDisk()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1305
diff changeset
563
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
564 unstableResourcesMonitorThread_ = boost::thread
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
565 (UnstableResourcesMonitorThread, this, threadSleep);
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
566 }
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
567
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
568
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
569
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
570 ServerIndex::~ServerIndex()
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
571 {
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
572 if (!done_)
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
573 {
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
574 LOG(ERROR) << "INTERNAL ERROR: ServerIndex::Stop() should be invoked manually to avoid mess in the destruction order!";
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
575 Stop();
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
576 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
577 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
578
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
579
1453
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
580
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
581 void ServerIndex::Stop()
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
582 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
583 if (!done_)
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
584 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
585 done_ = true;
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
586
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
587 if (db_.HasFlushToDisk() &&
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
588 flushThread_.joinable())
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
589 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
590 flushThread_.join();
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
591 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
592
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
593 if (unstableResourcesMonitorThread_.joinable())
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
594 {
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
595 unstableResourcesMonitorThread_.join();
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
596 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
597 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
598 }
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
599
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
600
c0bdc47165ef code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1432
diff changeset
601
2188
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
602 void ServerIndex::SetInstanceMetadata(std::map<MetadataType, std::string>& instanceMetadata,
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
603 int64_t instance,
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
604 MetadataType metadata,
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
605 const std::string& value)
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
606 {
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
607 db_.SetMetadata(instance, metadata, value);
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
608 instanceMetadata[metadata] = value;
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
609 }
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
610
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
611
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
612
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
613 StoreStatus ServerIndex::Store(std::map<MetadataType, std::string>& instanceMetadata,
1822
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
614 DicomInstanceToStore& instanceToStore,
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
615 const Attachments& attachments)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
616 {
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
617 boost::mutex::scoped_lock lock(mutex_);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
618
1822
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
619 const DicomMap& dicomSummary = instanceToStore.GetSummary();
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
620 const ServerIndex::MetadataMap& metadata = instanceToStore.GetMetadata();
9ed9458aa44f refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1773
diff changeset
621
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
622 instanceMetadata.clear();
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
623
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
624 try
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
625 {
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
626 Transaction t(*this);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
627
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
628 // Check whether this instance is already stored
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
629 {
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
630 ResourceType type;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
631 int64_t tmp;
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
632 if (db_.LookupResource(tmp, type, instanceToStore.GetHasher().HashInstance()))
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
633 {
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
634 assert(type == ResourceType_Instance);
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
635
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
636 if (overwrite_)
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
637 {
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
638 // Overwrite the old instance
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
639 LOG(INFO) << "Overwriting instance: " << instanceToStore.GetHasher().HashInstance();
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
640 db_.DeleteResource(tmp);
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
641 }
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
642 else
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
643 {
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
644 // Do nothing if the instance already exists
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
645 db_.GetAllMetadata(instanceMetadata, tmp);
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
646 return StoreStatus_AlreadyStored;
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
647 }
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
648 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
649 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
650
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
651 // Ensure there is enough room in the storage for the new instance
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
652 uint64_t instanceSize = 0;
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
653 for (Attachments::const_iterator it = attachments.begin();
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
654 it != attachments.end(); ++it)
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
655 {
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
656 instanceSize += it->GetCompressedSize();
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
657 }
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
658
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
659 Recycle(instanceSize, instanceToStore.GetHasher().HashPatient());
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
660
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
661 // Create the instance
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
662 int64_t instance = CreateResource(instanceToStore.GetHasher().HashInstance(), ResourceType_Instance);
2120
4b02ec79728a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2090
diff changeset
663 ServerToolbox::StoreMainDicomTags(db_, instance, ResourceType_Instance, dicomSummary);
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
664
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
665 // Detect up to which level the patient/study/series/instance
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
666 // hierarchy must be created
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
667 int64_t patient = -1, study = -1, series = -1;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
668 bool isNewPatient = false;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
669 bool isNewStudy = false;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
670 bool isNewSeries = false;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
671
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
672 {
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
673 ResourceType dummy;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
674
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
675 if (db_.LookupResource(series, dummy, instanceToStore.GetHasher().HashSeries()))
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
676 {
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
677 assert(dummy == ResourceType_Series);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
678 // The patient, the study and the series already exist
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
679
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
680 bool ok = (db_.LookupResource(patient, dummy, instanceToStore.GetHasher().HashPatient()) &&
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
681 db_.LookupResource(study, dummy, instanceToStore.GetHasher().HashStudy()));
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
682 assert(ok);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
683 }
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
684 else if (db_.LookupResource(study, dummy, instanceToStore.GetHasher().HashStudy()))
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
685 {
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
686 assert(dummy == ResourceType_Study);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
687
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
688 // New series: The patient and the study already exist
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
689 isNewSeries = true;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
690
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
691 bool ok = db_.LookupResource(patient, dummy, instanceToStore.GetHasher().HashPatient());
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
692 assert(ok);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
693 }
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
694 else if (db_.LookupResource(patient, dummy, instanceToStore.GetHasher().HashPatient()))
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
695 {
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
696 assert(dummy == ResourceType_Patient);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
697
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
698 // New study and series: The patient already exist
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
699 isNewStudy = true;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
700 isNewSeries = true;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
701 }
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
702 else
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
703 {
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
704 // New patient, study and series: Nothing exists
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
705 isNewPatient = true;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
706 isNewStudy = true;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
707 isNewSeries = true;
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
708 }
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
709 }
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
710
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
711 // Create the series if needed
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
712 if (isNewSeries)
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
713 {
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
714 series = CreateResource(instanceToStore.GetHasher().HashSeries(), ResourceType_Series);
2120
4b02ec79728a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2090
diff changeset
715 ServerToolbox::StoreMainDicomTags(db_, series, ResourceType_Series, dicomSummary);
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
716 }
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
717
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
718 // Create the study if needed
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
719 if (isNewStudy)
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
720 {
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
721 study = CreateResource(instanceToStore.GetHasher().HashStudy(), ResourceType_Study);
2120
4b02ec79728a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2090
diff changeset
722 ServerToolbox::StoreMainDicomTags(db_, study, ResourceType_Study, dicomSummary);
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
723 }
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
724
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
725 // Create the patient if needed
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
726 if (isNewPatient)
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
727 {
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
728 patient = CreateResource(instanceToStore.GetHasher().HashPatient(), ResourceType_Patient);
2120
4b02ec79728a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2090
diff changeset
729 ServerToolbox::StoreMainDicomTags(db_, patient, ResourceType_Patient, dicomSummary);
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
730 }
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
731
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
732 // Create the parent-to-child links
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
733 db_.AttachChild(series, instance);
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
734
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
735 if (isNewSeries)
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
736 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
737 db_.AttachChild(study, series);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
738 }
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
739
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
740 if (isNewStudy)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
741 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
742 db_.AttachChild(patient, study);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
743 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
744
432
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
745 // Sanity checks
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
746 assert(patient != -1);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
747 assert(study != -1);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
748 assert(series != -1);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
749 assert(instance != -1);
2b09d4ee86c6 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 431
diff changeset
750
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
751 // Attach the files to the newly created instance
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
752 for (Attachments::const_iterator it = attachments.begin();
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
753 it != attachments.end(); ++it)
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
754 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
755 db_.AddAttachment(instance, *it);
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
756 }
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
757
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
758 // Attach the user-specified metadata
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
759 for (MetadataMap::const_iterator
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
760 it = metadata.begin(); it != metadata.end(); ++it)
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
761 {
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
762 switch (it->first.first)
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
763 {
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
764 case ResourceType_Patient:
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
765 db_.SetMetadata(patient, it->first.second, it->second);
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
766 break;
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
767
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
768 case ResourceType_Study:
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
769 db_.SetMetadata(study, it->first.second, it->second);
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
770 break;
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
771
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
772 case ResourceType_Series:
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
773 db_.SetMetadata(series, it->first.second, it->second);
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
774 break;
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
775
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
776 case ResourceType_Instance:
2188
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
777 SetInstanceMetadata(instanceMetadata, instance, it->first.second, it->second);
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
778 break;
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
779
1006
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
780 default:
649d47854314 proper handling of metadata in Store
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1004
diff changeset
781 throw OrthancException(ErrorCode_ParameterOutOfRange);
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
782 }
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
783 }
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
784
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
785 // Attach the auto-computed metadata for the patient/study/series levels
2475
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
786 std::string now = SystemToolbox::GetNowIsoString(true /* use UTC time (not local time) */);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
787 db_.SetMetadata(series, MetadataType_LastUpdate, now);
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
788 db_.SetMetadata(study, MetadataType_LastUpdate, now);
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
789 db_.SetMetadata(patient, MetadataType_LastUpdate, now);
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
790
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
791 // Attach the auto-computed metadata for the instance level,
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
792 // reflecting these additions into the input metadata map
2188
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
793 SetInstanceMetadata(instanceMetadata, instance, MetadataType_Instance_ReceptionDate, now);
2640
c691fcf66071 ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2573
diff changeset
794 SetInstanceMetadata(instanceMetadata, instance, MetadataType_Instance_RemoteAet,
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
795 instanceToStore.GetOrigin().GetRemoteAetC());
2189
c4b3259c8bce New metadata automatically computed at the instance level: "TransferSyntax"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2188
diff changeset
796 SetInstanceMetadata(instanceMetadata, instance, MetadataType_Instance_Origin,
2640
c691fcf66071 ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2573
diff changeset
797 EnumerationToString(instanceToStore.GetOrigin().GetRequestOrigin()));
2726
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
798
1823
0ef4e6e66b56 "Origin" metadata for the instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1822
diff changeset
799 {
2189
c4b3259c8bce New metadata automatically computed at the instance level: "TransferSyntax"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2188
diff changeset
800 std::string s;
2726
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
801
2189
c4b3259c8bce New metadata automatically computed at the instance level: "TransferSyntax"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2188
diff changeset
802 if (instanceToStore.LookupTransferSyntax(s))
c4b3259c8bce New metadata automatically computed at the instance level: "TransferSyntax"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2188
diff changeset
803 {
2726
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
804 // New in Orthanc 1.2.0
2189
c4b3259c8bce New metadata automatically computed at the instance level: "TransferSyntax"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2188
diff changeset
805 SetInstanceMetadata(instanceMetadata, instance, MetadataType_Instance_TransferSyntax, s);
c4b3259c8bce New metadata automatically computed at the instance level: "TransferSyntax"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2188
diff changeset
806 }
2726
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
807
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
808 if (instanceToStore.GetOrigin().LookupRemoteIp(s))
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
809 {
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
810 // New in Orthanc 1.4.0
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
811 SetInstanceMetadata(instanceMetadata, instance, MetadataType_Instance_RemoteIp, s);
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
812 }
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
813
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
814 if (instanceToStore.GetOrigin().LookupCalledAet(s))
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
815 {
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
816 // New in Orthanc 1.4.0
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
817 SetInstanceMetadata(instanceMetadata, instance, MetadataType_Instance_CalledAet, s);
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
818 }
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
819
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
820 if (instanceToStore.GetOrigin().LookupHttpUsername(s))
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
821 {
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
822 // New in Orthanc 1.4.0
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
823 SetInstanceMetadata(instanceMetadata, instance, MetadataType_Instance_HttpUsername, s);
46061a91c88a new metadata (RemoteIP, CalledAET, HttpUsername), "?expand" metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2717
diff changeset
824 }
1823
0ef4e6e66b56 "Origin" metadata for the instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1822
diff changeset
825 }
0ef4e6e66b56 "Origin" metadata for the instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1822
diff changeset
826
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
827 const DicomValue* value;
2208
90ea60bee5ff New metadata automatically computed at the instance level: "SopClassUid"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2189
diff changeset
828 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_SOP_CLASS_UID)) != NULL &&
90ea60bee5ff New metadata automatically computed at the instance level: "SopClassUid"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2189
diff changeset
829 !value->IsNull() &&
90ea60bee5ff New metadata automatically computed at the instance level: "SopClassUid"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2189
diff changeset
830 !value->IsBinary())
90ea60bee5ff New metadata automatically computed at the instance level: "SopClassUid"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2189
diff changeset
831 {
90ea60bee5ff New metadata automatically computed at the instance level: "SopClassUid"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2189
diff changeset
832 SetInstanceMetadata(instanceMetadata, instance, MetadataType_Instance_SopClassUid, value->GetContent());
90ea60bee5ff New metadata automatically computed at the instance level: "SopClassUid"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2189
diff changeset
833 }
90ea60bee5ff New metadata automatically computed at the instance level: "SopClassUid"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2189
diff changeset
834
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
835 if ((value = dicomSummary.TestAndGetValue(DICOM_TAG_INSTANCE_NUMBER)) != NULL ||
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
836 (value = dicomSummary.TestAndGetValue(DICOM_TAG_IMAGE_INDEX)) != NULL)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
837 {
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
838 if (!value->IsNull() &&
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
839 !value->IsBinary())
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
840 {
2188
7cfc2e0383b3 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2142
diff changeset
841 SetInstanceMetadata(instanceMetadata, instance, MetadataType_Instance_IndexInSeries, value->GetContent());
1737
ec66a16aa398 removal of DicomStringValue and DicomNullValue
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
842 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
843 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
844
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1002
diff changeset
845 // Check whether the series of this new instance is now completed
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
846 if (isNewSeries)
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
847 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
848 ComputeExpectedNumberOfInstances(db_, series, dicomSummary);
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
849 }
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
850
205
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
851 SeriesStatus seriesStatus = GetSeriesStatus(series);
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
852 if (seriesStatus == SeriesStatus_Complete)
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
853 {
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
854 LogChange(series, ChangeType_CompletedSeries, ResourceType_Series, instanceToStore.GetHasher().HashSeries());
205
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
855 }
6ab754744446 logging of completed series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 204
diff changeset
856
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
857 // Mark the parent resources of this instance as unstable
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
858 MarkAsUnstable(series, ResourceType_Series, instanceToStore.GetHasher().HashSeries());
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
859 MarkAsUnstable(study, ResourceType_Study, instanceToStore.GetHasher().HashStudy());
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2826
diff changeset
860 MarkAsUnstable(patient, ResourceType_Patient, instanceToStore.GetHasher().HashPatient());
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
861
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
862 t.Commit(instanceSize);
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
863
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
864 return StoreStatus_Success;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
865 }
62
a70bb32802ae renaming Server
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 57
diff changeset
866 catch (OrthancException& e)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
867 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
868 LOG(ERROR) << "EXCEPTION [" << e.What() << "]";
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
869 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
870
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
871 return StoreStatus_Failure;
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
872 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
873
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
874
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
875 void ServerIndex::ComputeStatistics(Json::Value& target)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
876 {
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
877 boost::mutex::scoped_lock lock(mutex_);
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
878 target = Json::objectValue;
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
879
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
880 uint64_t cs = currentStorageSize_;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
881 assert(cs == db_.GetTotalCompressedSize());
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
882 uint64_t us = db_.GetTotalUncompressedSize();
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
883 target["TotalDiskSize"] = boost::lexical_cast<std::string>(cs);
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
884 target["TotalUncompressedSize"] = boost::lexical_cast<std::string>(us);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
885 target["TotalDiskSizeMB"] = static_cast<unsigned int>(cs / MEGA_BYTES);
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
886 target["TotalUncompressedSizeMB"] = static_cast<unsigned int>(us / MEGA_BYTES);
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
887
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
888 target["CountPatients"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Patient));
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
889 target["CountStudies"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Study));
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
890 target["CountSeries"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Series));
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
891 target["CountInstances"] = static_cast<unsigned int>(db_.GetResourceCount(ResourceType_Instance));
238
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
892 }
e4148b0ab1d0 statistics URI
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 237
diff changeset
893
187
8e673a65564d refactoring of storing new instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
894
8e673a65564d refactoring of storing new instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 186
diff changeset
895
585
b2357f1f026f fix types
jodogne
parents: 521
diff changeset
896 SeriesStatus ServerIndex::GetSeriesStatus(int64_t id)
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
897 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
898 // Get the expected number of instances in this series (from the metadata)
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
899 int64_t expected;
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
900 if (!GetMetadataAsInteger(expected, id, MetadataType_Series_ExpectedNumberOfInstances))
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
901 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
902 return SeriesStatus_Unknown;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
903 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
904
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
905 // Loop over the instances of this series
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
906 std::list<int64_t> children;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
907 db_.GetChildrenInternalId(children, id);
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
908
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
909 std::set<int64_t> instances;
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
910 for (std::list<int64_t>::const_iterator
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
911 it = children.begin(); it != children.end(); ++it)
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
912 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
913 // Get the index of this instance in the series
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
914 int64_t index;
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
915 if (!GetMetadataAsInteger(index, *it, MetadataType_Instance_IndexInSeries))
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
916 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
917 return SeriesStatus_Unknown;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
918 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
919
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
920 if (!(index > 0 && index <= expected))
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
921 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
922 // Out-of-range instance index
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
923 return SeriesStatus_Inconsistent;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
924 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
925
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
926 if (instances.find(index) != instances.end())
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
927 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
928 // Twice the same instance index
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
929 return SeriesStatus_Inconsistent;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
930 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
931
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
932 instances.insert(index);
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
933 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
934
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
935 if (static_cast<int64_t>(instances.size()) == expected)
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
936 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
937 return SeriesStatus_Complete;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
938 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
939 else
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
940 {
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
941 return SeriesStatus_Missing;
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
942 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
943 }
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
944
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
945
202
1650557bd81a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
946 void ServerIndex::MainDicomTagsToJson(Json::Value& target,
1668
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
947 int64_t resourceId,
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
948 ResourceType resourceType)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
949 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
950 DicomMap tags;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
951 db_.GetMainDicomTags(tags, resourceId);
1676
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
952
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
953 if (resourceType == ResourceType_Study)
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
954 {
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
955 DicomMap t1, t2;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
956 tags.ExtractStudyInformation(t1);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
957 tags.ExtractPatientInformation(t2);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
958
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
959 target["MainDicomTags"] = Json::objectValue;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
960 FromDcmtkBridge::ToJson(target["MainDicomTags"], t1, true);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
961
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
962 target["PatientMainDicomTags"] = Json::objectValue;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
963 FromDcmtkBridge::ToJson(target["PatientMainDicomTags"], t2, true);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
964 }
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
965 else
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
966 {
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
967 target["MainDicomTags"] = Json::objectValue;
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
968 FromDcmtkBridge::ToJson(target["MainDicomTags"], tags, true);
f079f3efe33b patient tags reported in studies
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1668
diff changeset
969 }
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
970 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
971
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
972 bool ServerIndex::LookupResource(Json::Value& result,
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
973 const std::string& publicId,
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
974 ResourceType expectedType)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
975 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
976 result = Json::objectValue;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
977
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
978 boost::mutex::scoped_lock lock(mutex_);
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
979
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
980 // Lookup for the requested resource
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
981 int64_t id;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
982 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
983 if (!db_.LookupResource(id, type, publicId) ||
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
984 type != expectedType)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
985 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
986 return false;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
987 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
988
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
989 // Find the parent resource (if it exists)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
990 if (type != ResourceType_Patient)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
991 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
992 int64_t parentId;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
993 if (!db_.LookupParent(parentId, id))
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
994 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
995 throw OrthancException(ErrorCode_InternalError);
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
996 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
997
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
998 std::string parent = db_.GetPublicId(parentId);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
999
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1000 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1001 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1002 case ResourceType_Study:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1003 result["ParentPatient"] = parent;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1004 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1005
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1006 case ResourceType_Series:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1007 result["ParentStudy"] = parent;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1008 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1009
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1010 case ResourceType_Instance:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1011 result["ParentSeries"] = parent;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1012 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1013
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1014 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1015 throw OrthancException(ErrorCode_InternalError);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1016 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1017 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1018
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1019 // List the children resources
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1020 std::list<std::string> children;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1021 db_.GetChildrenPublicId(children, id);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1022
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1023 if (type != ResourceType_Instance)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1024 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1025 Json::Value c = Json::arrayValue;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1026
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1027 for (std::list<std::string>::const_iterator
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
1028 it = children.begin(); it != children.end(); ++it)
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1029 {
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1030 c.append(*it);
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1031 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1032
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1033 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1034 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1035 case ResourceType_Patient:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1036 result["Studies"] = c;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1037 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1038
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1039 case ResourceType_Study:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1040 result["Series"] = c;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1041 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1042
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1043 case ResourceType_Series:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1044 result["Instances"] = c;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1045 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1046
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1047 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1048 throw OrthancException(ErrorCode_InternalError);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1049 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1050 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1051
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1052 // Set the resource type
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1053 switch (type)
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1054 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1055 case ResourceType_Patient:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1056 result["Type"] = "Patient";
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1057 break;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1058
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1059 case ResourceType_Study:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1060 result["Type"] = "Study";
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1061 break;
199
dfa2899d9960 refactoring cont
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 198
diff changeset
1062
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1063 case ResourceType_Series:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1064 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1065 result["Type"] = "Series";
434
ccf3a0a43dac EnumerationDictionary
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 433
diff changeset
1066 result["Status"] = EnumerationToString(GetSeriesStatus(id));
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1067
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1068 int64_t i;
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1069 if (GetMetadataAsInteger(i, id, MetadataType_Series_ExpectedNumberOfInstances))
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1070 result["ExpectedNumberOfInstances"] = static_cast<int>(i);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1071 else
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1072 result["ExpectedNumberOfInstances"] = Json::nullValue;
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1073
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1074 break;
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1075 }
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1076
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1077 case ResourceType_Instance:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1078 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1079 result["Type"] = "Instance";
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1080
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1081 FileInfo attachment;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1082 if (!db_.LookupAttachment(attachment, id, FileContentType_Dicom))
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1083 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1084 throw OrthancException(ErrorCode_InternalError);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1085 }
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1086
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1087 result["FileSize"] = static_cast<unsigned int>(attachment.GetUncompressedSize());
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1088 result["FileUuid"] = attachment.GetUuid();
200
9c58b2b03cf0 refactoring of read operations
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 199
diff changeset
1089
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1090 int64_t i;
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1091 if (GetMetadataAsInteger(i, id, MetadataType_Instance_IndexInSeries))
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
1092 result["IndexInSeries"] = static_cast<int>(i);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1093 else
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1094 result["IndexInSeries"] = Json::nullValue;
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1095
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1096 break;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1097 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1098
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1099 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1100 throw OrthancException(ErrorCode_InternalError);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1101 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1102
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1103 // Record the remaining information
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1104 result["ID"] = publicId;
1668
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
1105 MainDicomTagsToJson(result, id, type);
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1106
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1107 std::string tmp;
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1108
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1109 if (db_.LookupMetadata(tmp, id, MetadataType_AnonymizedFrom))
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1110 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1111 result["AnonymizedFrom"] = tmp;
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1112 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1113
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1114 if (db_.LookupMetadata(tmp, id, MetadataType_ModifiedFrom))
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1115 {
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1116 result["ModifiedFrom"] = tmp;
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1117 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1118
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1119 if (type == ResourceType_Patient ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1120 type == ResourceType_Study ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1121 type == ResourceType_Series)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1122 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1123 result["IsStable"] = !unstableResources_.Contains(id);
1148
ac36589f699e LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1139
diff changeset
1124
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1125 if (db_.LookupMetadata(tmp, id, MetadataType_LastUpdate))
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1126 {
1148
ac36589f699e LastUpdate metadata is now always returned for patients, studies and series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1139
diff changeset
1127 result["LastUpdate"] = tmp;
1236
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1235
diff changeset
1128 }
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1129 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1130
198
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1131 return true;
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1132 }
663cc6c46d0a before refactoring of ServerIndex::GetXXX
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 197
diff changeset
1133
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1134
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1135 bool ServerIndex::LookupAttachment(FileInfo& attachment,
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1136 const std::string& instanceUuid,
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
1137 FileContentType contentType)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1138 {
206
4453a010d0db flush to disk thread
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 205
diff changeset
1139 boost::mutex::scoped_lock lock(mutex_);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1140
193
a1b9d1e1497b failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1141 int64_t id;
a1b9d1e1497b failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1142 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1143 if (!db_.LookupResource(id, type, instanceUuid))
192
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1144 {
1113
ba5c0908600c Refactoring of HttpOutput ("Content-Length" header is now always sent)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1102
diff changeset
1145 throw OrthancException(ErrorCode_UnknownResource);
192
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1146 }
193
a1b9d1e1497b failed attempt to compile with linux standard base
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 192
diff changeset
1147
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1148 if (db_.LookupAttachment(attachment, id, contentType))
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1149 {
233
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 232
diff changeset
1150 assert(attachment.GetContentType() == contentType);
232
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1151 return true;
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1152 }
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1153 else
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1154 {
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1155 return false;
5368bbe813cf refactoring of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 231
diff changeset
1156 }
192
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1157 }
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1158
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1159
c56dc32266e0 refactoring getfile
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 191
diff changeset
1160
1354
3dd494f201a1 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1352
diff changeset
1161 void ServerIndex::GetAllUuids(std::list<std::string>& target,
190
b6cef9d45cc3 getallpublicids
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 189
diff changeset
1162 ResourceType resourceType)
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1163 {
1357
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1354
diff changeset
1164 boost::mutex::scoped_lock lock(mutex_);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1354
diff changeset
1165 db_.GetAllPublicIds(target, resourceType);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1166 }
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1167
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1168
1509
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1169 void ServerIndex::GetAllUuids(std::list<std::string>& target,
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1170 ResourceType resourceType,
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1171 size_t since,
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1172 size_t limit)
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1173 {
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1174 if (limit == 0)
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1175 {
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1176 target.clear();
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1177 return;
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1178 }
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1179
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1180 boost::mutex::scoped_lock lock(mutex_);
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1181 db_.GetAllPublicIds(target, resourceType, since, limit);
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1182 }
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1183
0586ed8897f1 limit and since arguments while retrieving DICOM resources in the REST API
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1486
diff changeset
1184
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1185 template <typename T>
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1186 static void FormatLog(Json::Value& target,
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1187 const std::list<T>& log,
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1188 const std::string& name,
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1189 bool done,
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1190 int64_t since)
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1191 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1192 Json::Value items = Json::arrayValue;
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1193 for (typename std::list<T>::const_iterator
1304
7b6925b0890d cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1300
diff changeset
1194 it = log.begin(); it != log.end(); ++it)
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1195 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1196 Json::Value item;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1197 it->Format(item);
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1198 items.append(item);
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1199 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1200
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1201 target = Json::objectValue;
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1202 target[name] = items;
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1203 target["Done"] = done;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1204
1305
536515f87cb4 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1304
diff changeset
1205 int64_t last = (log.empty() ? since : log.back().GetSeq());
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1206 target["Last"] = static_cast<int>(last);
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1207 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1208
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1209
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1210 void ServerIndex::GetChanges(Json::Value& target,
204
7f4acf490179 changes api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 202
diff changeset
1211 int64_t since,
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1212 unsigned int maxResults)
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1213 {
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1214 std::list<ServerIndexChange> changes;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1215 bool done;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1216
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1217 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1218 boost::mutex::scoped_lock lock(mutex_);
2717
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1219
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1220 // Fix wrt. Orthanc <= 1.3.2: A transaction was missing, as
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1221 // "GetLastChange()" involves calls to "GetPublicId()"
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1222 Transaction transaction(*this);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1223 db_.GetChanges(changes, done, since, maxResults);
2717
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1224 transaction.Commit(0);
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1225 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1226
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1227 FormatLog(target, changes, "Changes", done, since);
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1228 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1229
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1230
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1231 void ServerIndex::GetLastChange(Json::Value& target)
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1232 {
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1233 std::list<ServerIndexChange> changes;
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1234
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1235 {
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1236 boost::mutex::scoped_lock lock(mutex_);
2717
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1237
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1238 // Fix wrt. Orthanc <= 1.3.2: A transaction was missing, as
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1239 // "GetLastChange()" involves calls to "GetPublicId()"
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1240 Transaction transaction(*this);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1241 db_.GetLastChange(changes);
2717
d33659c28c6b fix missing transaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2668
diff changeset
1242 transaction.Commit(0);
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1243 }
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1244
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1245 FormatLog(target, changes, "Changes", true, 0);
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1246 }
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1247
1240
62c35e4b67db refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1239
diff changeset
1248
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1249 void ServerIndex::LogExportedResource(const std::string& publicId,
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1250 const std::string& remoteModality)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1251 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1252 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1253 Transaction transaction(*this);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1254
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1255 int64_t id;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1256 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1257 if (!db_.LookupResource(id, type, publicId))
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1258 {
2573
3372c5255333 StoreScuJob, Orthanc Explorer for jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2475
diff changeset
1259 throw OrthancException(ErrorCode_InexistentItem);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1260 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1261
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1262 std::string patientId;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1263 std::string studyInstanceUid;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1264 std::string seriesInstanceUid;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1265 std::string sopInstanceUid;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1266
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1267 int64_t currentId = id;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1268 ResourceType currentType = type;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1269
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1270 // Iteratively go up inside the patient/study/series/instance hierarchy
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1271 bool done = false;
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1272 while (!done)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1273 {
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1274 DicomMap map;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1275 db_.GetMainDicomTags(map, currentId);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1276
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1277 switch (currentType)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1278 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1279 case ResourceType_Patient:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1280 if (map.HasTag(DICOM_TAG_PATIENT_ID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1281 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1282 patientId = map.GetValue(DICOM_TAG_PATIENT_ID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1283 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1284 done = true;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1285 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1286
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1287 case ResourceType_Study:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1288 if (map.HasTag(DICOM_TAG_STUDY_INSTANCE_UID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1289 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1290 studyInstanceUid = map.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1291 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1292 currentType = ResourceType_Patient;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1293 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1294
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1295 case ResourceType_Series:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1296 if (map.HasTag(DICOM_TAG_SERIES_INSTANCE_UID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1297 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1298 seriesInstanceUid = map.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1299 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1300 currentType = ResourceType_Study;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1301 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1302
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1303 case ResourceType_Instance:
2090
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1304 if (map.HasTag(DICOM_TAG_SOP_INSTANCE_UID))
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1305 {
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1306 sopInstanceUid = map.GetValue(DICOM_TAG_SOP_INSTANCE_UID).GetContent();
1824a02e0951 improved robustness for files with no PatientID
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2069
diff changeset
1307 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1308 currentType = ResourceType_Series;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1309 break;
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1310
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1311 default:
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1312 throw OrthancException(ErrorCode_InternalError);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1313 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1314
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1315 // If we have not reached the Patient level, find the parent of
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1316 // the current resource
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1317 if (!done)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1318 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1319 bool ok = db_.LookupParent(currentId, currentId);
375
d1ea72f1c967 major fix of storescu
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 315
diff changeset
1320 assert(ok);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1321 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1322 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1323
1246
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1324 ExportedResource resource(-1,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1325 type,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1326 publicId,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1327 remoteModality,
2475
8cc3ca64a534 Orthanc now uses UTC (universal time) instead of local time in its database
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2447
diff changeset
1328 SystemToolbox::GetNowIsoString(true /* use UTC time (not local time) */),
1246
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1329 patientId,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1330 studyInstanceUid,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1331 seriesInstanceUid,
54bf0f0245f4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1244
diff changeset
1332 sopInstanceUid);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1333
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1334 db_.LogExportedResource(resource);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1335 transaction.Commit(0);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1336 }
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1337
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1338
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1339 void ServerIndex::GetExportedResources(Json::Value& target,
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1340 int64_t since,
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1341 unsigned int maxResults)
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1342 {
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1343 std::list<ExportedResource> exported;
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1344 bool done;
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1345
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1346 {
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1347 boost::mutex::scoped_lock lock(mutex_);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1348 db_.GetExportedResources(exported, done, since, maxResults);
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1349 }
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1350
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1351 FormatLog(target, exported, "Exports", done, since);
231
8098448bd827 export log
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 226
diff changeset
1352 }
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1353
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1354
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1355 void ServerIndex::GetLastExportedResource(Json::Value& target)
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1356 {
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1357 std::list<ExportedResource> exported;
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1358
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1359 {
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1360 boost::mutex::scoped_lock lock(mutex_);
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1361 db_.GetLastExportedResource(exported);
1244
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1362 }
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1363
a0e420c5f2b8 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1241
diff changeset
1364 FormatLog(target, exported, "Exports", true, 0);
237
16a4ac70bd8a last change and export
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 233
diff changeset
1365 }
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1366
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1367
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1368 bool ServerIndex::IsRecyclingNeeded(uint64_t instanceSize)
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1369 {
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1370 if (maximumStorageSize_ != 0)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1371 {
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
1372 uint64_t currentSize = currentStorageSize_ - listener_->GetSizeOfFilesToRemove();
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1373 assert(db_.GetTotalCompressedSize() == currentSize);
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
1374
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1375 if (currentSize + instanceSize > maximumStorageSize_)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1376 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1377 return true;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1378 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1379 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1380
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1381 if (maximumPatients_ != 0)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1382 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1383 uint64_t patientCount = db_.GetResourceCount(ResourceType_Patient);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1384 if (patientCount > maximumPatients_)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1385 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1386 return true;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1387 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1388 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1389
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1390 return false;
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1391 }
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1392
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1393
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1394 void ServerIndex::Recycle(uint64_t instanceSize,
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1395 const std::string& newPatientId)
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1396 {
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1397 if (!IsRecyclingNeeded(instanceSize))
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1398 {
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1399 return;
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1400 }
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1401
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1402 // Check whether other DICOM instances from this patient are
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1403 // already stored
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1404 int64_t patientToAvoid;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1405 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1406 bool hasPatientToAvoid = db_.LookupResource(patientToAvoid, type, newPatientId);
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1407
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1408 if (hasPatientToAvoid && type != ResourceType_Patient)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1409 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1410 throw OrthancException(ErrorCode_InternalError);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1411 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1412
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1413 // Iteratively select patient to remove until there is enough
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1414 // space in the DICOM store
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1415 int64_t patientToRecycle;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1416 while (true)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1417 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1418 // If other instances of this patient are already in the store,
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1419 // we must avoid to recycle them
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1420 bool ok = hasPatientToAvoid ?
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1421 db_.SelectPatientToRecycle(patientToRecycle, patientToAvoid) :
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1422 db_.SelectPatientToRecycle(patientToRecycle);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1423
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1424 if (!ok)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1425 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1426 throw OrthancException(ErrorCode_FullStorage);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1427 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1428
1331
77e129ba64e4 Prevent freeze on C-FIND if no DICOM tag is to be returned
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1310
diff changeset
1429 VLOG(1) << "Recycling one patient";
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1430 db_.DeleteResource(patientToRecycle);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1431
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1432 if (!IsRecyclingNeeded(instanceSize))
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1433 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1434 // OK, we're done
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1435 break;
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1436 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1437 }
268
4bc02e2254ec preparing ServerIndex for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 264
diff changeset
1438 }
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1439
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1440 void ServerIndex::SetMaximumPatientCount(unsigned int count)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1441 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1442 boost::mutex::scoped_lock lock(mutex_);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1443 maximumPatients_ = count;
270
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1444
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1445 if (count == 0)
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1446 {
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1447 LOG(WARNING) << "No limit on the number of stored patients";
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1448 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1449 else
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1450 {
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1451 LOG(WARNING) << "At most " << count << " patients will be stored";
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1452 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1453
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1454 StandaloneRecycling();
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1455 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1456
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1457 void ServerIndex::SetMaximumStorageSize(uint64_t size)
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1458 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1459 boost::mutex::scoped_lock lock(mutex_);
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1460 maximumStorageSize_ = size;
270
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1461
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1462 if (size == 0)
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1463 {
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1464 LOG(WARNING) << "No limit on the size of the storage area";
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1465 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1466 else
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1467 {
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1468 LOG(WARNING) << "At most " << (size / MEGA_BYTES) << "MB will be used for the storage area";
270
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1469 }
e6a4c4329481 parameters for storage capacity
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 269
diff changeset
1470
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1471 StandaloneRecycling();
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1472 }
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1473
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
1474 void ServerIndex::SetOverwriteInstances(bool overwrite)
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
1475 {
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
1476 boost::mutex::scoped_lock lock(mutex_);
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
1477 overwrite_ = overwrite;
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
1478 }
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
1479
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2726
diff changeset
1480
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1481 void ServerIndex::StandaloneRecycling()
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1482 {
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1483 // WARNING: No mutex here, do not include this as a public method
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
1484 Transaction t(*this);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1485 Recycle(0, "");
278
771f12042be9 more efficient determination of storage size for recycling
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 273
diff changeset
1486 t.Commit(0);
269
f6fdf5abe751 recycling up and running
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 268
diff changeset
1487 }
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1488
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1489
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1490 bool ServerIndex::IsProtectedPatient(const std::string& publicId)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1491 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1492 boost::mutex::scoped_lock lock(mutex_);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1493
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1494 // Lookup for the requested resource
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1495 int64_t id;
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1496 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1497 if (!db_.LookupResource(id, type, publicId) ||
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1498 type != ResourceType_Patient)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1499 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1500 throw OrthancException(ErrorCode_ParameterOutOfRange);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1501 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1502
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1503 return db_.IsProtectedPatient(id);
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1504 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1505
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1506
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1507 void ServerIndex::SetProtectedPatient(const std::string& publicId,
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1508 bool isProtected)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1509 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1510 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1511 Transaction transaction(*this);
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1512
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1513 // Lookup for the requested resource
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1514 int64_t id;
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1515 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1516 if (!db_.LookupResource(id, type, publicId) ||
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1517 type != ResourceType_Patient)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1518 {
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1519 throw OrthancException(ErrorCode_ParameterOutOfRange);
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1520 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1521
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1522 db_.SetProtectedPatient(id, isProtected);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1523 transaction.Commit(0);
272
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1524
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1525 if (isProtected)
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1526 LOG(INFO) << "Patient " << publicId << " has been protected";
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1527 else
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1528 LOG(INFO) << "Patient " << publicId << " has been unprotected";
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1529 }
337c506461d2 protection from rest api
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 270
diff changeset
1530
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1531
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1532 void ServerIndex::GetChildren(std::list<std::string>& result,
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1533 const std::string& publicId)
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1534 {
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1535 result.clear();
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1536
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1537 boost::mutex::scoped_lock lock(mutex_);
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1538
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1539 ResourceType type;
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1540 int64_t resource;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1541 if (!db_.LookupResource(resource, type, publicId))
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1542 {
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1543 throw OrthancException(ErrorCode_UnknownResource);
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1544 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1545
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1546 if (type == ResourceType_Instance)
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1547 {
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1548 // An instance cannot have a child
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1549 throw OrthancException(ErrorCode_BadParameterType);
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1550 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1551
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1552 std::list<int64_t> tmp;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1553 db_.GetChildrenInternalId(tmp, resource);
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1554
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1555 for (std::list<int64_t>::const_iterator
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1556 it = tmp.begin(); it != tmp.end(); ++it)
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1557 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1558 result.push_back(db_.GetPublicId(*it));
714
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1559 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1560 }
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1561
6a1dbba0cca7 new implementation of C-Find handler
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 704
diff changeset
1562
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1563 void ServerIndex::GetChildInstances(std::list<std::string>& result,
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1564 const std::string& publicId)
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1565 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1566 result.clear();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1567
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1568 boost::mutex::scoped_lock lock(mutex_);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1569
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1570 ResourceType type;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1571 int64_t top;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1572 if (!db_.LookupResource(top, type, publicId))
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1573 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1574 throw OrthancException(ErrorCode_UnknownResource);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1575 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1576
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1577 if (type == ResourceType_Instance)
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1578 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1579 // The resource is already an instance: Do not go down the hierarchy
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1580 result.push_back(publicId);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1581 return;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1582 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1583
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1584 std::stack<int64_t> toExplore;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1585 toExplore.push(top);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1586
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1587 std::list<int64_t> tmp;
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1588
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1589 while (!toExplore.empty())
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1590 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1591 // Get the internal ID of the current resource
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1592 int64_t resource = toExplore.top();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1593 toExplore.pop();
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1594
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1595 if (db_.GetResourceType(resource) == ResourceType_Instance)
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1596 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1597 result.push_back(db_.GetPublicId(resource));
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1598 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1599 else
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1600 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1601 // Tag all the children of this resource as to be explored
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1602 db_.GetChildrenInternalId(tmp, resource);
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1603 for (std::list<int64_t>::const_iterator
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
1604 it = tmp.begin(); it != tmp.end(); ++it)
304
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1605 {
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1606 toExplore.push(*it);
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1607 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1608 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1609 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1610 }
4eea080e6e7a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 278
diff changeset
1611
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1612
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1613 void ServerIndex::SetMetadata(const std::string& publicId,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1614 MetadataType type,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1615 const std::string& value)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1616 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1617 boost::mutex::scoped_lock lock(mutex_);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1618 Transaction t(*this);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1619
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1620 ResourceType rtype;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1621 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1622 if (!db_.LookupResource(id, rtype, publicId))
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1623 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1624 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1625 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1626
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1627 db_.SetMetadata(id, type, value);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1628
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1629 if (IsUserMetadata(type))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1630 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1631 LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1632 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1633
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1634 t.Commit(0);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1635 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1636
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1637
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1638 void ServerIndex::DeleteMetadata(const std::string& publicId,
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1639 MetadataType type)
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1640 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1641 boost::mutex::scoped_lock lock(mutex_);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1642 Transaction t(*this);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1643
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1644 ResourceType rtype;
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1645 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1646 if (!db_.LookupResource(id, rtype, publicId))
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1647 {
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1648 throw OrthancException(ErrorCode_UnknownResource);
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1649 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1650
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1651 db_.DeleteMetadata(id, type);
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1652
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1653 if (IsUserMetadata(type))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1654 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1655 LogChange(id, ChangeType_UpdatedMetadata, rtype, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1656 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1657
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
1658 t.Commit(0);
438
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1659 }
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1660
7bbe77cb9e12 DELETE metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 436
diff changeset
1661
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1662 bool ServerIndex::LookupMetadata(std::string& target,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1663 const std::string& publicId,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1664 MetadataType type)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1665 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1666 boost::mutex::scoped_lock lock(mutex_);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1667
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1668 ResourceType rtype;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1669 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1670 if (!db_.LookupResource(id, rtype, publicId))
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1671 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1672 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1673 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1674
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1675 return db_.LookupMetadata(target, id, type);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1676 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1677
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1678
739
696dbb4fd390 api uniformization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
1679 void ServerIndex::ListAvailableMetadata(std::list<MetadataType>& target,
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1680 const std::string& publicId)
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1681 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1682 boost::mutex::scoped_lock lock(mutex_);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1683
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1684 ResourceType rtype;
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1685 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1686 if (!db_.LookupResource(id, rtype, publicId))
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1687 {
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1688 throw OrthancException(ErrorCode_UnknownResource);
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1689 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1690
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1691 db_.ListAvailableMetadata(target, id);
436
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1692 }
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1693
d51186bf7602 read access to metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 434
diff changeset
1694
697
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1695 void ServerIndex::ListAvailableAttachments(std::list<FileContentType>& target,
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1696 const std::string& publicId,
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1697 ResourceType expectedType)
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1698 {
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1699 boost::mutex::scoped_lock lock(mutex_);
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1700
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1701 ResourceType type;
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1702 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1703 if (!db_.LookupResource(id, type, publicId) ||
697
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1704 expectedType != type)
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1705 {
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1706 throw OrthancException(ErrorCode_UnknownResource);
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1707 }
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1708
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1709 db_.ListAvailableAttachments(target, id);
697
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1710 }
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1711
dd1ce9a2844c access to attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 689
diff changeset
1712
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1713 bool ServerIndex::LookupParent(std::string& target,
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1714 const std::string& publicId)
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1715 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1716 boost::mutex::scoped_lock lock(mutex_);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1717
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1718 ResourceType type;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1719 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1720 if (!db_.LookupResource(id, type, publicId))
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1721 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1722 throw OrthancException(ErrorCode_UnknownResource);
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1723 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1724
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1725 int64_t parentId;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1726 if (db_.LookupParent(parentId, id))
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1727 {
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1728 target = db_.GetPublicId(parentId);
306
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1729 return true;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1730 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1731 else
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1732 {
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1733 return false;
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1734 }
326d5a4a5af3 modification of instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 304
diff changeset
1735 }
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1736
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1737
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1738 uint64_t ServerIndex::IncrementGlobalSequence(GlobalProperty sequence)
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1739 {
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1740 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1741 Transaction transaction(*this);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1742
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1743 uint64_t seq = IncrementGlobalSequenceInternal(sequence);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1744 transaction.Commit(0);
311
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1745
26efccdff583 anonymisation
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 310
diff changeset
1746 return seq;
310
6ab6cdeedf4e global sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 306
diff changeset
1747 }
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1748
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1749
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1750
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1751 void ServerIndex::LogChange(ChangeType changeType,
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1752 const std::string& publicId)
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1753 {
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1754 boost::mutex::scoped_lock lock(mutex_);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1755 Transaction transaction(*this);
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1756
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1757 int64_t id;
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1758 ResourceType type;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1759 if (!db_.LookupResource(id, type, publicId))
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1760 {
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1761 throw OrthancException(ErrorCode_UnknownResource);
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1762 }
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1763
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1764 LogChange(id, changeType, type, publicId);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1765 transaction.Commit(0);
315
fc856d175d18 modifications
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 311
diff changeset
1766 }
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1767
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1768
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1769 void ServerIndex::DeleteChanges()
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1770 {
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1771 boost::mutex::scoped_lock lock(mutex_);
1286
b4acdb37e43b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1271
diff changeset
1772 db_.ClearChanges();
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1773 }
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1774
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1775 void ServerIndex::DeleteExportedResources()
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1776 {
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1777 boost::mutex::scoped_lock lock(mutex_);
1286
b4acdb37e43b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1271
diff changeset
1778 db_.ClearExportedResources();
413
47d63c941902 clearing /exports and /changes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 399
diff changeset
1779 }
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1780
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1781
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1782 void ServerIndex::GetStatisticsInternal(/* out */ uint64_t& compressedSize,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1783 /* out */ uint64_t& uncompressedSize,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1784 /* out */ unsigned int& countStudies,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1785 /* out */ unsigned int& countSeries,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1786 /* out */ unsigned int& countInstances,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1787 /* in */ int64_t id,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1788 /* in */ ResourceType type)
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1789 {
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1790 std::stack<int64_t> toExplore;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1791 toExplore.push(id);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1792
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1793 countInstances = 0;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1794 countSeries = 0;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1795 countStudies = 0;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1796 compressedSize = 0;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1797 uncompressedSize = 0;
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1798
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1799 while (!toExplore.empty())
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1800 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1801 // Get the internal ID of the current resource
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1802 int64_t resource = toExplore.top();
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1803 toExplore.pop();
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1804
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1805 ResourceType thisType = db_.GetResourceType(resource);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1806
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1807 std::list<FileContentType> f;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1808 db_.ListAvailableAttachments(f, resource);
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1809
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1810 for (std::list<FileContentType>::const_iterator
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1811 it = f.begin(); it != f.end(); ++it)
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1812 {
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1813 FileInfo attachment;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1814 if (db_.LookupAttachment(attachment, resource, *it))
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1815 {
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1816 compressedSize += attachment.GetCompressedSize();
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1817 uncompressedSize += attachment.GetUncompressedSize();
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1818 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1819 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
1820
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1821 if (thisType == ResourceType_Instance)
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1822 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1823 countInstances++;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1824 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1825 else
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1826 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1827 switch (thisType)
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1828 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1829 case ResourceType_Study:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1830 countStudies++;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1831 break;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1832
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1833 case ResourceType_Series:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1834 countSeries++;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1835 break;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1836
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1837 default:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1838 break;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1839 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1840
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1841 // Tag all the children of this resource as to be explored
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1842 std::list<int64_t> tmp;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1843 db_.GetChildrenInternalId(tmp, resource);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1844 for (std::list<int64_t>::const_iterator
656
08eca5d86aad fixes to cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 646
diff changeset
1845 it = tmp.begin(); it != tmp.end(); ++it)
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1846 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1847 toExplore.push(*it);
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1848 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1849 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1850 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1851
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1852 if (countStudies == 0)
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1853 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1854 countStudies = 1;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1855 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1856
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1857 if (countSeries == 0)
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1858 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1859 countSeries = 1;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1860 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1861 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1862
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1863
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1864
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1865 void ServerIndex::GetStatistics(Json::Value& target,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1866 const std::string& publicId)
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1867 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1868 boost::mutex::scoped_lock lock(mutex_);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1869
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1870 ResourceType type;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1871 int64_t top;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1872 if (!db_.LookupResource(top, type, publicId))
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1873 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1874 throw OrthancException(ErrorCode_UnknownResource);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1875 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1876
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1877 uint64_t uncompressedSize;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1878 uint64_t compressedSize;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1879 unsigned int countStudies;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1880 unsigned int countSeries;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1881 unsigned int countInstances;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1882 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1883 countSeries, countInstances, top, type);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1884
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1885 target = Json::objectValue;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1886 target["DiskSize"] = boost::lexical_cast<std::string>(compressedSize);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1887 target["DiskSizeMB"] = static_cast<unsigned int>(compressedSize / MEGA_BYTES);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1888 target["UncompressedSize"] = boost::lexical_cast<std::string>(uncompressedSize);
1310
61ce8147f30d custom database back-end
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1306
diff changeset
1889 target["UncompressedSizeMB"] = static_cast<unsigned int>(uncompressedSize / MEGA_BYTES);
440
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1890
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1891 switch (type)
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1892 {
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1893 // Do NOT add "break" below this point!
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1894 case ResourceType_Patient:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1895 target["CountStudies"] = countStudies;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1896
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1897 case ResourceType_Study:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1898 target["CountSeries"] = countSeries;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1899
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1900 case ResourceType_Series:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1901 target["CountInstances"] = countInstances;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1902
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1903 case ResourceType_Instance:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1904 default:
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1905 break;
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1906 }
23e5b35e3c5c statistics for patient/studies/series/instances
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 438
diff changeset
1907 }
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1908
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1909
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1910 void ServerIndex::GetStatistics(/* out */ uint64_t& compressedSize,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1911 /* out */ uint64_t& uncompressedSize,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1912 /* out */ unsigned int& countStudies,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1913 /* out */ unsigned int& countSeries,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1914 /* out */ unsigned int& countInstances,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1915 const std::string& publicId)
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1916 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1917 boost::mutex::scoped_lock lock(mutex_);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1918
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1919 ResourceType type;
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1920 int64_t top;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
1921 if (!db_.LookupResource(top, type, publicId))
646
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1922 {
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1923 throw OrthancException(ErrorCode_UnknownResource);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1924 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1925
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1926 GetStatisticsInternal(compressedSize, uncompressedSize, countStudies,
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1927 countSeries, countInstances, top, type);
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1928 }
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1929
fb49bf72ac2d fix issue 7
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 615
diff changeset
1930
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
1931 void ServerIndex::UnstableResourcesMonitorThread(ServerIndex* that,
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
1932 unsigned int threadSleep)
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1933 {
2940
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
1934 int stableAge;
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
1935
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
1936 {
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
1937 OrthancConfiguration::ReaderLock lock;
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
1938 stableAge = lock.GetConfiguration().GetUnsignedIntegerParameter("StableAge", 60);
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
1939 }
4767d36679ed refactoring access to Orthanc configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2898
diff changeset
1940
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1941 if (stableAge <= 0)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1942 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1943 stableAge = 60;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1944 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1945
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1946 LOG(INFO) << "Starting the monitor for stable resources (stable age = " << stableAge << ")";
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1947
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1948 while (!that->done_)
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1949 {
2665
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
1950 // Check for stable resources each few seconds
389d050a2e66 fix deadlock, speed up unit tests
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
1951 boost::this_thread::sleep(boost::posix_time::milliseconds(threadSleep));
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1952
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1953 boost::mutex::scoped_lock lock(that->mutex_);
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1954
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1955 while (!that->unstableResources_.IsEmpty() &&
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1956 that->unstableResources_.GetOldestPayload().GetAge() > static_cast<unsigned int>(stableAge))
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1957 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1958 // This DICOM resource has not received any new instance for
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1959 // some time. It can be considered as stable.
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1960
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1961 UnstableResourcePayload payload;
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1962 int64_t id = that->unstableResources_.RemoveOldest(payload);
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1963
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1964 // Ensure that the resource is still existing before logging the change
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
1965 if (that->db_.IsExistingResource(id))
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1966 {
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1967 switch (payload.GetResourceType())
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1968 {
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1969 case ResourceType_Patient:
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1970 that->LogChange(id, ChangeType_StablePatient, ResourceType_Patient, payload.GetPublicId());
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1971 break;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1972
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1973 case ResourceType_Study:
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1974 that->LogChange(id, ChangeType_StableStudy, ResourceType_Study, payload.GetPublicId());
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1975 break;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1976
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1977 case ResourceType_Series:
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
1978 that->LogChange(id, ChangeType_StableSeries, ResourceType_Series, payload.GetPublicId());
513
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1979 break;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1980
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1981 default:
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1982 throw OrthancException(ErrorCode_InternalError);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1983 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1984
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 511
diff changeset
1985 //LOG(INFO) << "Stable resource: " << EnumerationToString(payload.type_) << " " << id;
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1986 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1987 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1988 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1989
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1990 LOG(INFO) << "Closing the monitor thread for stable resources";
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1991 }
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1992
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1993
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1994 void ServerIndex::MarkAsUnstable(int64_t id,
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1995 Orthanc::ResourceType type,
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
1996 const std::string& publicId)
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1997 {
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1998 // WARNING: Before calling this method, "mutex_" must be locked.
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
1999
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2000 assert(type == Orthanc::ResourceType_Patient ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2001 type == Orthanc::ResourceType_Study ||
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2002 type == Orthanc::ResourceType_Series);
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2003
1177
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
2004 UnstableResourcePayload payload(type, publicId);
5b2d8c280ac2 Plugins can monitor changes through callbacks
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1162
diff changeset
2005 unstableResources_.AddOrMakeMostRecent(id, payload);
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2006 //LOG(INFO) << "Unstable resource: " << EnumerationToString(type) << " " << id;
1189
6b9b02a16e99 NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1177
diff changeset
2007
1237
0f3716b88af7 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1236
diff changeset
2008 LogChange(id, ChangeType_NewChildInstance, type, publicId);
511
3b735fdf320b monitoring of stable patients/studies/series
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 440
diff changeset
2009 }
521
2c739f76d0bb lookup tag values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 513
diff changeset
2010
2c739f76d0bb lookup tag values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 513
diff changeset
2011
2c739f76d0bb lookup tag values
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 513
diff changeset
2012
1728
4941494b5dd8 rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1727
diff changeset
2013 void ServerIndex::LookupIdentifierExact(std::list<std::string>& result,
4941494b5dd8 rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1727
diff changeset
2014 ResourceType level,
4941494b5dd8 rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1727
diff changeset
2015 const DicomTag& tag,
4941494b5dd8 rename LookupIdentifier as LookupIdentifierExact
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1727
diff changeset
2016 const std::string& value)
615
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2017 {
1727
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
2018 assert((level == ResourceType_Patient && tag == DICOM_TAG_PATIENT_ID) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
2019 (level == ResourceType_Study && tag == DICOM_TAG_STUDY_INSTANCE_UID) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
2020 (level == ResourceType_Study && tag == DICOM_TAG_ACCESSION_NUMBER) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
2021 (level == ResourceType_Series && tag == DICOM_TAG_SERIES_INSTANCE_UID) ||
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1725
diff changeset
2022 (level == ResourceType_Instance && tag == DICOM_TAG_SOP_INSTANCE_UID));
1725
a7c05bbfaf6a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1721
diff changeset
2023
615
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2024 result.clear();
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2025
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2026 boost::mutex::scoped_lock lock(mutex_);
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2027
1746
d143db00a794 SetOfResources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1744
diff changeset
2028 LookupIdentifierQuery query(level);
d143db00a794 SetOfResources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1744
diff changeset
2029 query.AddConstraint(tag, IdentifierConstraintType_Equal, value);
d143db00a794 SetOfResources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1744
diff changeset
2030 query.Apply(result, db_);
615
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2031 }
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2032
ec0b7a51d7bd speed up find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 585
diff changeset
2033
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2034 StoreStatus ServerIndex::AddAttachment(const FileInfo& attachment,
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2035 const std::string& publicId)
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2036 {
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2037 boost::mutex::scoped_lock lock(mutex_);
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2038
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2039 Transaction t(*this);
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2040
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2041 ResourceType resourceType;
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2042 int64_t resourceId;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
2043 if (!db_.LookupResource(resourceId, resourceType, publicId))
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2044 {
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2045 return StoreStatus_Failure; // Inexistent resource
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2046 }
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2047
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2048 // Remove possible previous attachment
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2049 db_.DeleteAttachment(resourceId, attachment.GetContentType());
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2050
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2051 // Locate the patient of the target resource
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2052 int64_t patientId = resourceId;
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2053 for (;;)
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2054 {
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2055 int64_t parent;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2056 if (db_.LookupParent(parent, patientId))
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2057 {
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2058 // We have not reached the patient level yet
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2059 patientId = parent;
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2060 }
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2061 else
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2062 {
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2063 // We have reached the patient level
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2064 break;
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2065 }
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2066 }
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2067
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2068 // Possibly apply the recycling mechanism while preserving this patient
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2069 assert(db_.GetResourceType(patientId) == ResourceType_Patient);
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2070 Recycle(attachment.GetCompressedSize(), db_.GetPublicId(patientId));
704
4789da60d655 recycling with custom attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 702
diff changeset
2071
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2072 db_.AddAttachment(resourceId, attachment);
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2073
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2074 if (IsUserContentType(attachment.GetContentType()))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2075 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2076 LogChange(resourceId, ChangeType_UpdatedAttachment, resourceType, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2077 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2078
699
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2079 t.Commit(attachment.GetCompressedSize());
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2080
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2081 return StoreStatus_Success;
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2082 }
2929e17f8447 add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 697
diff changeset
2083
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2084
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2085 void ServerIndex::DeleteAttachment(const std::string& publicId,
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2086 FileContentType type)
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2087 {
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2088 boost::mutex::scoped_lock lock(mutex_);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2089 Transaction t(*this);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2090
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2091 ResourceType rtype;
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2092 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
2093 if (!db_.LookupResource(id, rtype, publicId))
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2094 {
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2095 throw OrthancException(ErrorCode_UnknownResource);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2096 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2097
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2098 db_.DeleteAttachment(id, type);
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2099
1773
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2100 if (IsUserContentType(type))
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2101 {
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2102 LogChange(id, ChangeType_UpdatedAttachment, rtype, publicId);
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2103 }
613df4362575 New UpdatedAttachment and UpdatedMetadata events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1757
diff changeset
2104
702
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2105 t.Commit(0);
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2106 }
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2107
7592a48e97e4 delete custom attachment
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 701
diff changeset
2108
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2109 bool ServerIndex::GetMetadata(Json::Value& target,
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2110 const std::string& publicId)
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2111 {
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2112 boost::mutex::scoped_lock lock(mutex_);
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2113
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2114 target = Json::objectValue;
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2115
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2116 ResourceType type;
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2117 int64_t id;
1294
910478b2d4e4 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1288
diff changeset
2118 if (!db_.LookupResource(id, type, publicId))
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2119 {
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2120 return false;
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2121 }
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2122
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2123 std::list<MetadataType> metadata;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2124 db_.ListAvailableMetadata(metadata, id);
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2125
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2126 for (std::list<MetadataType>::const_iterator
1304
7b6925b0890d cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1300
diff changeset
2127 it = metadata.begin(); it != metadata.end(); ++it)
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2128 {
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2129 std::string key = EnumerationToString(*it);
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2130
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2131 std::string value;
1247
32fcc5dc7562 abstraction
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1246
diff changeset
2132 if (!db_.LookupMetadata(value, id, *it))
1238
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2133 {
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2134 value.clear();
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2135 }
6c07108ff1e2 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1237
diff changeset
2136
1002
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2137 target[key] = value;
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2138 }
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2139
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2140 return true;
b067017a8a5b anonymization refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 831
diff changeset
2141 }
1218
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2142
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2143
1249
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2144 void ServerIndex::SetGlobalProperty(GlobalProperty property,
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2145 const std::string& value)
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2146 {
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2147 boost::mutex::scoped_lock lock(mutex_);
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2148 db_.SetGlobalProperty(property, value);
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2149 }
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2150
40725595aaf0 Plugins can get/set global properties to save their configuration
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1247
diff changeset
2151
2668
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2152 bool ServerIndex::LookupGlobalProperty(std::string& value,
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2153 GlobalProperty property)
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2154 {
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2155 boost::mutex::scoped_lock lock(mutex_);
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2156 return db_.LookupGlobalProperty(value, property);
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2157 }
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2158
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2159
1218
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2160 std::string ServerIndex::GetGlobalProperty(GlobalProperty property,
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2161 const std::string& defaultValue)
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2162 {
1239
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2163 std::string value;
2668
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2164
d26dd081df97 saving jobs engine on exit
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2665
diff changeset
2165 if (LookupGlobalProperty(value, property))
1239
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2166 {
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2167 return value;
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2168 }
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2169 else
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2170 {
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2171 return defaultValue;
92c6b3b57699 cleaning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1238
diff changeset
2172 }
1218
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2173 }
efece308018e report database version in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1198
diff changeset
2174
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2175
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2176 bool ServerIndex::GetMainDicomTags(DicomMap& result,
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2177 const std::string& publicId,
1677
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2178 ResourceType expectedType,
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2179 ResourceType levelOfInterest)
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2180 {
1677
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2181 // Yes, the following test could be shortened, but we wish to make it as clear as possible
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2182 if (!(expectedType == ResourceType_Patient && levelOfInterest == ResourceType_Patient) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2183 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Patient) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2184 !(expectedType == ResourceType_Study && levelOfInterest == ResourceType_Study) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2185 !(expectedType == ResourceType_Series && levelOfInterest == ResourceType_Series) &&
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2186 !(expectedType == ResourceType_Instance && levelOfInterest == ResourceType_Instance))
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2187 {
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2188 throw OrthancException(ErrorCode_ParameterOutOfRange);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2189 }
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2190
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2191 result.Clear();
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2192
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2193 boost::mutex::scoped_lock lock(mutex_);
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2194
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2195 // Lookup for the requested resource
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2196 int64_t id;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2197 ResourceType type;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2198 if (!db_.LookupResource(id, type, publicId) ||
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2199 type != expectedType)
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2200 {
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2201 return false;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2202 }
1677
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2203
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2204 if (type == ResourceType_Study)
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2205 {
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2206 DicomMap tmp;
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2207 db_.GetMainDicomTags(tmp, id);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2208
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2209 switch (levelOfInterest)
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2210 {
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2211 case ResourceType_Patient:
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2212 tmp.ExtractPatientInformation(result);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2213 return true;
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2214
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2215 case ResourceType_Study:
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2216 tmp.ExtractStudyInformation(result);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2217 return true;
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2218
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2219 default:
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2220 throw OrthancException(ErrorCode_InternalError);
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2221 }
a903d57d9f0c adaptation of search with patient tags at study level
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1676
diff changeset
2222 }
1352
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2223 else
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2224 {
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2225 db_.GetMainDicomTags(result, id);
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2226 return true;
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2227 }
382439943749 ResourceFinder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1331
diff changeset
2228 }
1555
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2229
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2230
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2231 bool ServerIndex::LookupResourceType(ResourceType& type,
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2232 const std::string& publicId)
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2233 {
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2234 boost::mutex::scoped_lock lock(mutex_);
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2235
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2236 int64_t id;
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2237 return db_.LookupResource(id, type, publicId);
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2238 }
d6a93e12b1c1 Creation of DICOM files with encapsulated PDF
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1509
diff changeset
2239
1668
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2240
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2241 unsigned int ServerIndex::GetDatabaseVersion()
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2242 {
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2243 boost::mutex::scoped_lock lock(mutex_);
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2244 return db_.GetDatabaseVersion();
de1413733c97 reconstructing main dicom tags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1555
diff changeset
2245 }
1750
55d52567bebb LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1747
diff changeset
2246
55d52567bebb LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1747
diff changeset
2247
1753
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2248 void ServerIndex::FindCandidates(std::vector<std::string>& resources,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2249 std::vector<std::string>& instances,
1757
98abb8d7f905 ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1754
diff changeset
2250 const ::Orthanc::LookupResource& lookup)
1750
55d52567bebb LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1747
diff changeset
2251 {
1753
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2252 boost::mutex::scoped_lock lock(mutex_);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2253
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2254 std::list<int64_t> tmp;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2255 lookup.FindCandidates(tmp, db_);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2256
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2257 resources.resize(tmp.size());
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2258 instances.resize(tmp.size());
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2259
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2260 size_t pos = 0;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2261 for (std::list<int64_t>::const_iterator
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2262 it = tmp.begin(); it != tmp.end(); ++it, pos++)
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2263 {
1754
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1753
diff changeset
2264 assert(db_.GetResourceType(*it) == lookup.GetLevel());
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1753
diff changeset
2265
1753
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2266 int64_t instance;
2120
4b02ec79728a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2090
diff changeset
2267 if (!ServerToolbox::FindOneChildInstance(instance, db_, *it, lookup.GetLevel()))
1753
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2268 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2269 throw OrthancException(ErrorCode_InternalError);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2270 }
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2271
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2272 resources[pos] = db_.GetPublicId(*it);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2273 instances[pos] = db_.GetPublicId(instance);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1751
diff changeset
2274 }
1750
55d52567bebb LookupResource implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1747
diff changeset
2275 }
1898
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2276
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2277
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2278 bool ServerIndex::LookupParent(std::string& target,
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2279 const std::string& publicId,
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2280 ResourceType parentType)
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2281 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2282 boost::mutex::scoped_lock lock(mutex_);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2283
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2284 ResourceType type;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2285 int64_t id;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2286 if (!db_.LookupResource(id, type, publicId))
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2287 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2288 throw OrthancException(ErrorCode_UnknownResource);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2289 }
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2290
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2291 while (type != parentType)
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2292 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2293 int64_t parentId;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2294
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2295 if (type == ResourceType_Patient || // Cannot further go up in hierarchy
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2296 !db_.LookupParent(parentId, id))
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2297 {
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2298 return false;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2299 }
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2300
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2301 id = parentId;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2302 type = GetParentResourceType(type);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2303 }
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2304
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2305 target = db_.GetPublicId(id);
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2306 return true;
e018037d4d0e Support of optional tags for counting resources in C-Find
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1823
diff changeset
2307 }
2209
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2308
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2309
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2310 void ServerIndex::ReconstructInstance(ParsedDicomFile& dicom)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2311 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2312 DicomMap summary;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2313 dicom.ExtractDicomSummary(summary);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2314
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2315 DicomInstanceHasher hasher(summary);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2316
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2317 boost::mutex::scoped_lock lock(mutex_);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2318
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2319 try
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2320 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2321 Transaction t(*this);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2322
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2323 int64_t patient = -1, study = -1, series = -1, instance = -1;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2324
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2325 ResourceType dummy;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2326 if (!db_.LookupResource(patient, dummy, hasher.HashPatient()) ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2327 !db_.LookupResource(study, dummy, hasher.HashStudy()) ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2328 !db_.LookupResource(series, dummy, hasher.HashSeries()) ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2329 !db_.LookupResource(instance, dummy, hasher.HashInstance()) ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2330 patient == -1 ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2331 study == -1 ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2332 series == -1 ||
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2333 instance == -1)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2334 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2335 throw OrthancException(ErrorCode_InternalError);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2336 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2337
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2338 db_.ClearMainDicomTags(patient);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2339 db_.ClearMainDicomTags(study);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2340 db_.ClearMainDicomTags(series);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2341 db_.ClearMainDicomTags(instance);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2342
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2343 ServerToolbox::StoreMainDicomTags(db_, patient, ResourceType_Patient, summary);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2344 ServerToolbox::StoreMainDicomTags(db_, study, ResourceType_Study, summary);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2345 ServerToolbox::StoreMainDicomTags(db_, series, ResourceType_Series, summary);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2346 ServerToolbox::StoreMainDicomTags(db_, instance, ResourceType_Instance, summary);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2347
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2348 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2349 std::string s;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2350 if (dicom.LookupTransferSyntax(s))
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2351 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2352 db_.SetMetadata(instance, MetadataType_Instance_TransferSyntax, s);
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2353 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2354 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2355
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2356 const DicomValue* value;
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2357 if ((value = summary.TestAndGetValue(DICOM_TAG_SOP_CLASS_UID)) != NULL &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2358 !value->IsNull() &&
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2359 !value->IsBinary())
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2360 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2361 db_.SetMetadata(instance, MetadataType_Instance_SopClassUid, value->GetContent());
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2362 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2363
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2364 t.Commit(0); // No change in the DB size
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2365 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2366 catch (OrthancException& e)
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2367 {
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2368 LOG(ERROR) << "EXCEPTION [" << e.What() << "]";
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2369 }
e3fd5bc429a2 URI to reconstruct the main DICOM tags, the JSON summary and the metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2208
diff changeset
2370 }
0
3959d33612cc initial commit
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2371 }