annotate OrthancServer/FromDcmtkBridge.h @ 759:8cfc6119a5bd dicom-rt

integration mainline -> dicom-rt
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 16 Apr 2014 16:04:55 +0200
parents b22312081388 2d0a347e8cfc
children e57e08ed510f
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2014 Medical Physics Department, CHU of Liege,
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4 * Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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33 #pragma once
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34
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35 #include "../Core/DicomFormat/DicomInstanceHasher.h"
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36 #include "../Core/RestApi/RestApiOutput.h"
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37 #include "../Core/Toolbox.h"
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38
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39 #include <dcmtk/dcmdata/dcdatset.h>
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40 #include <dcmtk/dcmdata/dcfilefo.h>
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41 #include <json/json.h>
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42 #include <memory>
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43
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44 namespace Orthanc
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45 {
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46 enum DicomRootLevel
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47 {
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48 DicomRootLevel_Patient,
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49 DicomRootLevel_Study,
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50 DicomRootLevel_Series,
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51 DicomRootLevel_Instance
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52 };
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53
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54 enum DicomReplaceMode
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55 {
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56 DicomReplaceMode_InsertIfAbsent,
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57 DicomReplaceMode_ThrowIfAbsent,
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58 DicomReplaceMode_IgnoreIfAbsent
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59 };
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60
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61 class ParsedDicomFile : public IDynamicObject
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62 {
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63 private:
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64 std::auto_ptr<DcmFileFormat> file_;
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65
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66 ParsedDicomFile(DcmFileFormat& other) :
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67 file_(dynamic_cast<DcmFileFormat*>(other.clone()))
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68 {
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69 }
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71 void Setup(const char* content,
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72 size_t size);
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73
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74 public:
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75 typedef std::list< std::pair<DicomTag, unsigned int> > SequencePath;
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76
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77 ParsedDicomFile(const char* content,
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78 size_t size)
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79 {
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80 Setup(content, size);
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81 }
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82
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83 ParsedDicomFile(const std::string& content)
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84 {
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85 if (content.size() == 0)
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86 Setup(NULL, 0);
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87 else
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88 Setup(&content[0], content.size());
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89 }
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90
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91 DcmFileFormat& GetDicom()
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92 {
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93 return *file_;
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94 }
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95
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96 ParsedDicomFile* Clone()
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97 {
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98 return new ParsedDicomFile(*file_);
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99 }
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100
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101 void SendPathValue(RestApiOutput& output,
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102 const UriComponents& uri);
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103
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104 void Answer(RestApiOutput& output);
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105
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106 void Remove(const DicomTag& tag);
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107
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108 void Insert(const DicomTag& tag,
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109 const std::string& value);
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110
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111 void Replace(const DicomTag& tag,
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112 const std::string& value,
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113 DicomReplaceMode mode);
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114
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115 void RemovePrivateTags();
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116
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117 bool GetTagValue(std::string& value,
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118 const DicomTag& tag);
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119
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120 bool GetTagValue(std::string& value,
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121 const SequencePath& path,
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122 const DicomTag& tag);
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123
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124 DicomInstanceHasher GetHasher();
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125 };
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126
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127 class FromDcmtkBridge
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128 {
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129 public:
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130 static void Convert(DicomMap& target, DcmDataset& dataset);
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131
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132 static DicomTag GetTag(const DcmElement& element);
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133
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134 static DicomValue* ConvertLeafElement(DcmElement& element);
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135
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136 static void ToJson(Json::Value& target,
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137 DcmDataset& dataset,
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138 unsigned int maxStringLength = 256);
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139
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140 static void ToJson(Json::Value& target,
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141 const std::string& path,
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142 unsigned int maxStringLength = 256);
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143
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144 static void ExtractPngImage(std::string& result,
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145 DcmDataset& dataset,
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146 unsigned int frame,
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147 ImageExtractionMode mode);
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148
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149 static void ExtractPngImage(std::string& result,
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150 const std::string& dicomContent,
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151 unsigned int frame,
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152 ImageExtractionMode mode);
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153
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154 static std::string GetName(const DicomTag& tag);
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155
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156 static DicomTag ParseTag(const char* name);
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157
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158 static DicomTag ParseTag(const std::string& name)
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159 {
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160 return ParseTag(name.c_str());
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161 }
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162
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163 static bool HasTag(const DicomMap& fields,
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164 const std::string& tagName)
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165 {
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166 return fields.HasTag(ParseTag(tagName));
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167 }
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168
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169 static const DicomValue& GetValue(const DicomMap& fields,
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170 const std::string& tagName)
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171 {
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172 return fields.GetValue(ParseTag(tagName));
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173 }
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174
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175 static void SetValue(DicomMap& target,
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176 const std::string& tagName,
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177 DicomValue* value)
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178 {
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179 target.SetValue(ParseTag(tagName), value);
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180 }
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181
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182 static void Print(FILE* fp,
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183 const DicomMap& m);
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184
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185 static void ToJson(Json::Value& result,
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186 const DicomMap& values);
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187
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188 static std::string GenerateUniqueIdentifier(DicomRootLevel level);
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189
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190 static bool SaveToMemoryBuffer(std::string& buffer,
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191 DcmDataset* dataSet);
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192 };
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193 }