Mercurial > hg > orthanc
annotate UnitTestsSources/FromDcmtkTests.cpp @ 1971:869a87c08673
fix for mingw <= 4.2
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Mon, 11 Apr 2016 13:50:44 +0200 |
parents | a1c1c606ce98 |
children | 4b545a8b1f95 |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * |
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6 * This program is free software: you can redistribute it and/or |
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7 * modify it under the terms of the GNU General Public License as |
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8 * published by the Free Software Foundation, either version 3 of the |
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9 * License, or (at your option) any later version. |
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10 * |
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11 * In addition, as a special exception, the copyright holders of this |
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12 * program give permission to link the code of its release with the |
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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14 * that use the same license as the "OpenSSL" library), and distribute |
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15 * the linked executables. You must obey the GNU General Public License |
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16 * in all respects for all of the code used other than "OpenSSL". If you |
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17 * modify file(s) with this exception, you may extend this exception to |
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18 * your version of the file(s), but you are not obligated to do so. If |
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19 * you do not wish to do so, delete this exception statement from your |
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20 * version. If you delete this exception statement from all source files |
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21 * in the program, then also delete it here. |
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22 * |
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23 * This program is distributed in the hope that it will be useful, but |
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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26 * General Public License for more details. |
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27 * |
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28 * You should have received a copy of the GNU General Public License |
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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30 **/ |
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31 |
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32 |
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33 #include "PrecompiledHeadersUnitTests.h" |
782 | 34 #include "gtest/gtest.h" |
35 | |
36 #include "../OrthancServer/FromDcmtkBridge.h" | |
37 #include "../OrthancServer/OrthancInitialization.h" | |
786 | 38 #include "../OrthancServer/DicomModification.h" |
1692 | 39 #include "../OrthancServer/ServerToolbox.h" |
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40 #include "../Core/OrthancException.h" |
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41 #include "../Core/Images/ImageBuffer.h" |
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42 #include "../Core/Images/PngReader.h" |
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43 #include "../Core/Images/PngWriter.h" |
1937 | 44 #include "../Core/Images/Image.h" |
1940 | 45 #include "../Core/Images/ImageProcessing.h" |
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46 #include "../Core/Uuid.h" |
1940 | 47 #include "../Core/Endianness.h" |
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48 #include "../Resources/EncodingTests.h" |
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49 #include "../OrthancServer/DicomProtocol/DicomFindAnswers.h" |
1940 | 50 #include "../OrthancServer/Internals/DicomImageDecoder.h" |
782 | 51 |
1690 | 52 #include <dcmtk/dcmdata/dcelem.h> |
53 | |
782 | 54 using namespace Orthanc; |
55 | |
56 TEST(DicomFormat, Tag) | |
57 { | |
58 ASSERT_EQ("PatientName", FromDcmtkBridge::GetName(DicomTag(0x0010, 0x0010))); | |
59 | |
60 DicomTag t = FromDcmtkBridge::ParseTag("SeriesDescription"); | |
61 ASSERT_EQ(0x0008, t.GetGroup()); | |
62 ASSERT_EQ(0x103E, t.GetElement()); | |
63 | |
64 t = FromDcmtkBridge::ParseTag("0020-e040"); | |
65 ASSERT_EQ(0x0020, t.GetGroup()); | |
66 ASSERT_EQ(0xe040, t.GetElement()); | |
67 | |
68 // Test ==() and !=() operators | |
69 ASSERT_TRUE(DICOM_TAG_PATIENT_ID == DicomTag(0x0010, 0x0020)); | |
70 ASSERT_FALSE(DICOM_TAG_PATIENT_ID != DicomTag(0x0010, 0x0020)); | |
71 } | |
72 | |
73 | |
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74 TEST(DicomModification, Basic) |
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75 { |
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76 DicomModification m; |
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77 m.SetupAnonymization(); |
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78 //m.SetLevel(DicomRootLevel_Study); |
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79 //m.Replace(DICOM_TAG_PATIENT_ID, "coucou"); |
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80 //m.Replace(DICOM_TAG_PATIENT_NAME, "coucou"); |
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81 |
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82 ParsedDicomFile o(true); |
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83 o.SaveToFile("UnitTestsResults/anon.dcm"); |
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84 |
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85 for (int i = 0; i < 10; i++) |
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86 { |
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87 char b[1024]; |
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88 sprintf(b, "UnitTestsResults/anon%06d.dcm", i); |
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89 std::auto_ptr<ParsedDicomFile> f(o.Clone()); |
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90 if (i > 4) |
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91 o.Replace(DICOM_TAG_SERIES_INSTANCE_UID, "coucou"); |
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92 m.Apply(*f); |
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93 f->SaveToFile(b); |
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94 } |
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95 } |
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96 |
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97 |
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98 TEST(DicomModification, Anonymization) |
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99 { |
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100 ASSERT_EQ(DICOM_TAG_PATIENT_NAME, FromDcmtkBridge::ParseTag("PatientName")); |
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101 |
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102 const DicomTag privateTag(0x0045, 0x0010); |
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103 const DicomTag privateTag2(FromDcmtkBridge::ParseTag("0031-1020")); |
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104 ASSERT_TRUE(privateTag.IsPrivate()); |
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105 ASSERT_TRUE(privateTag2.IsPrivate()); |
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106 ASSERT_EQ(0x0031, privateTag2.GetGroup()); |
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107 ASSERT_EQ(0x1020, privateTag2.GetElement()); |
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108 |
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109 std::string s; |
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110 ParsedDicomFile o(true); |
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111 o.Replace(DICOM_TAG_PATIENT_NAME, "coucou"); |
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112 ASSERT_FALSE(o.GetTagValue(s, privateTag)); |
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113 o.Insert(privateTag, "private tag", false); |
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114 ASSERT_TRUE(o.GetTagValue(s, privateTag)); |
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115 ASSERT_STREQ("private tag", s.c_str()); |
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116 |
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117 ASSERT_FALSE(o.GetTagValue(s, privateTag2)); |
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118 ASSERT_THROW(o.Replace(privateTag2, "hello", DicomReplaceMode_ThrowIfAbsent), OrthancException); |
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119 ASSERT_FALSE(o.GetTagValue(s, privateTag2)); |
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120 o.Replace(privateTag2, "hello", DicomReplaceMode_IgnoreIfAbsent); |
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121 ASSERT_FALSE(o.GetTagValue(s, privateTag2)); |
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122 o.Replace(privateTag2, "hello", DicomReplaceMode_InsertIfAbsent); |
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123 ASSERT_TRUE(o.GetTagValue(s, privateTag2)); |
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124 ASSERT_STREQ("hello", s.c_str()); |
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125 o.Replace(privateTag2, "hello world"); |
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126 ASSERT_TRUE(o.GetTagValue(s, privateTag2)); |
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127 ASSERT_STREQ("hello world", s.c_str()); |
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128 |
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129 ASSERT_TRUE(o.GetTagValue(s, DICOM_TAG_PATIENT_NAME)); |
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130 ASSERT_FALSE(Toolbox::IsUuid(s)); |
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131 |
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132 DicomModification m; |
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133 m.SetupAnonymization(); |
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134 m.Keep(privateTag); |
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135 |
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136 m.Apply(o); |
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137 |
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138 ASSERT_TRUE(o.GetTagValue(s, DICOM_TAG_PATIENT_NAME)); |
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139 ASSERT_TRUE(Toolbox::IsUuid(s)); |
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140 ASSERT_TRUE(o.GetTagValue(s, privateTag)); |
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141 ASSERT_STREQ("private tag", s.c_str()); |
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142 |
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143 m.SetupAnonymization(); |
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144 m.Apply(o); |
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145 ASSERT_FALSE(o.GetTagValue(s, privateTag)); |
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146 } |
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147 |
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148 |
802 | 149 #include <dcmtk/dcmdata/dcuid.h> |
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150 |
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151 TEST(DicomModification, Png) |
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152 { |
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153 // Red dot in http://en.wikipedia.org/wiki/Data_URI_scheme (RGBA image) |
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154 std::string s = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg=="; |
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155 |
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156 std::string m, cc; |
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157 Toolbox::DecodeDataUriScheme(m, cc, s); |
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158 |
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159 ASSERT_EQ("image/png", m); |
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160 |
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161 PngReader reader; |
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162 reader.ReadFromMemory(cc); |
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163 |
1492 | 164 ASSERT_EQ(5u, reader.GetHeight()); |
165 ASSERT_EQ(5u, reader.GetWidth()); | |
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166 ASSERT_EQ(PixelFormat_RGBA32, reader.GetFormat()); |
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167 |
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168 ParsedDicomFile o(true); |
1562 | 169 o.EmbedContent(s); |
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170 o.SaveToFile("UnitTestsResults/png1.dcm"); |
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171 |
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172 // Red dot, without alpha channel |
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173 s = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAIAAAACDbGyAAAACXBIWXMAAAsTAAALEwEAmpwYAAAAB3RJTUUH3gUGDTcIn2+8BgAAACJJREFUCNdj/P//PwMjIwME/P/P+J8BBTAxEOL/R9Lx/z8AynoKAXOeiV8AAAAASUVORK5CYII="; |
1562 | 174 o.EmbedContent(s); |
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175 o.SaveToFile("UnitTestsResults/png2.dcm"); |
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176 |
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177 // Check box in Graylevel8 |
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178 s = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAAAAAA6mKC9AAAACXBIWXMAAAsTAAALEwEAmpwYAAAAB3RJTUUH3gUGDDcB53FulQAAAElJREFUGNNtj0sSAEEEQ1+U+185s1CtmRkblQ9CZldsKHJDk6DLGLJa6chjh0ooQmpjXMM86zPwydGEj6Ed/UGykkEM8X+p3u8/8LcOJIWLGeMAAAAASUVORK5CYII="; |
1562 | 179 o.EmbedContent(s); |
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180 //o.Replace(DICOM_TAG_SOP_CLASS_UID, UID_DigitalXRayImageStorageForProcessing); |
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181 o.SaveToFile("UnitTestsResults/png3.dcm"); |
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182 |
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183 |
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184 { |
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185 // Gradient in Graylevel16 |
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186 |
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187 ImageBuffer img; |
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188 img.SetWidth(256); |
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189 img.SetHeight(256); |
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190 img.SetFormat(PixelFormat_Grayscale16); |
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191 |
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192 uint16_t v = 0; |
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193 for (unsigned int y = 0; y < img.GetHeight(); y++) |
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194 { |
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195 uint16_t *p = reinterpret_cast<uint16_t*>(img.GetAccessor().GetRow(y)); |
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196 for (unsigned int x = 0; x < img.GetWidth(); x++, p++, v++) |
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197 { |
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198 *p = v; |
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199 } |
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200 } |
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201 |
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202 o.EmbedImage(img.GetAccessor()); |
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203 o.SaveToFile("UnitTestsResults/png4.dcm"); |
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204 } |
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205 } |
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206 |
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207 |
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208 TEST(FromDcmtkBridge, Encodings1) |
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209 { |
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210 for (unsigned int i = 0; i < testEncodingsCount; i++) |
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211 { |
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212 std::string source(testEncodingsEncoded[i]); |
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213 std::string expected(testEncodingsExpected[i]); |
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214 std::string s = Toolbox::ConvertToUtf8(source, testEncodings[i]); |
1695 | 215 //std::cout << EnumerationToString(testEncodings[i]) << std::endl; |
1089 | 216 EXPECT_EQ(expected, s); |
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217 } |
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218 } |
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219 |
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220 |
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221 TEST(FromDcmtkBridge, Enumerations) |
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222 { |
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223 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#sect_C.12.1.1.2 |
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224 Encoding e; |
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225 |
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226 ASSERT_FALSE(GetDicomEncoding(e, "")); |
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227 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 6")); ASSERT_EQ(Encoding_Utf8, e); |
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228 |
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229 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-2 |
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230 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 100")); ASSERT_EQ(Encoding_Latin1, e); |
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231 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 101")); ASSERT_EQ(Encoding_Latin2, e); |
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232 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 109")); ASSERT_EQ(Encoding_Latin3, e); |
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233 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 110")); ASSERT_EQ(Encoding_Latin4, e); |
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234 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 144")); ASSERT_EQ(Encoding_Cyrillic, e); |
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235 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 127")); ASSERT_EQ(Encoding_Arabic, e); |
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236 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 126")); ASSERT_EQ(Encoding_Greek, e); |
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237 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 138")); ASSERT_EQ(Encoding_Hebrew, e); |
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238 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 148")); ASSERT_EQ(Encoding_Latin5, e); |
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239 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 13")); ASSERT_EQ(Encoding_Japanese, e); |
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240 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 166")); ASSERT_EQ(Encoding_Thai, e); |
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241 |
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242 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-3 |
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243 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 6")); ASSERT_EQ(Encoding_Utf8, e); |
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244 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 100")); ASSERT_EQ(Encoding_Latin1, e); |
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245 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 101")); ASSERT_EQ(Encoding_Latin2, e); |
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246 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 109")); ASSERT_EQ(Encoding_Latin3, e); |
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247 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 110")); ASSERT_EQ(Encoding_Latin4, e); |
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248 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 144")); ASSERT_EQ(Encoding_Cyrillic, e); |
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249 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 127")); ASSERT_EQ(Encoding_Arabic, e); |
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250 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 126")); ASSERT_EQ(Encoding_Greek, e); |
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251 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 138")); ASSERT_EQ(Encoding_Hebrew, e); |
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252 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 148")); ASSERT_EQ(Encoding_Latin5, e); |
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253 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 13")); ASSERT_EQ(Encoding_Japanese, e); |
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254 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 166")); ASSERT_EQ(Encoding_Thai, e); |
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255 |
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256 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-4 |
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257 ASSERT_FALSE(GetDicomEncoding(e, "ISO 2022 IR 87")); //ASSERT_EQ(Encoding_JapaneseKanji, e); |
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258 ASSERT_FALSE(GetDicomEncoding(e, "ISO 2022 IR 159")); //ASSERT_EQ(Encoding_JapaneseKanjiSupplementary, e); |
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259 ASSERT_FALSE(GetDicomEncoding(e, "ISO 2022 IR 149")); //ASSERT_EQ(Encoding_Korean, e); |
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260 |
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261 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-5 |
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262 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 192")); ASSERT_EQ(Encoding_Utf8, e); |
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263 ASSERT_TRUE(GetDicomEncoding(e, "GB18030")); ASSERT_EQ(Encoding_Chinese, e); |
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264 } |
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265 |
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266 |
1091 | 267 TEST(FromDcmtkBridge, Encodings3) |
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268 { |
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269 for (unsigned int i = 0; i < testEncodingsCount; i++) |
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270 { |
1695 | 271 //std::cout << EnumerationToString(testEncodings[i]) << std::endl; |
1091 | 272 std::string dicom; |
273 | |
274 { | |
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275 ParsedDicomFile f(true); |
1091 | 276 f.SetEncoding(testEncodings[i]); |
1695 | 277 |
278 std::string s = Toolbox::ConvertToUtf8(testEncodingsEncoded[i], testEncodings[i]); | |
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279 f.Insert(DICOM_TAG_PATIENT_NAME, s, false); |
1091 | 280 f.SaveToMemoryBuffer(dicom); |
281 } | |
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282 |
1347 | 283 if (testEncodings[i] != Encoding_Windows1251) |
1091 | 284 { |
285 ParsedDicomFile g(dicom); | |
286 | |
287 if (testEncodings[i] != Encoding_Ascii) | |
288 { | |
289 ASSERT_EQ(testEncodings[i], g.GetEncoding()); | |
290 } | |
291 | |
292 std::string tag; | |
293 ASSERT_TRUE(g.GetTagValue(tag, DICOM_TAG_PATIENT_NAME)); | |
294 ASSERT_EQ(std::string(testEncodingsExpected[i]), tag); | |
295 } | |
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296 } |
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297 } |
1360 | 298 |
299 | |
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300 TEST(FromDcmtkBridge, ValueRepresentation) |
1360 | 301 { |
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302 ASSERT_EQ(ValueRepresentation_PatientName, |
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303 FromDcmtkBridge::GetValueRepresentation(DICOM_TAG_PATIENT_NAME)); |
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304 ASSERT_EQ(ValueRepresentation_Date, |
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305 FromDcmtkBridge::GetValueRepresentation(DicomTag(0x0008, 0x0020) /* StudyDate */)); |
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306 ASSERT_EQ(ValueRepresentation_Time, |
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307 FromDcmtkBridge::GetValueRepresentation(DicomTag(0x0008, 0x0030) /* StudyTime */)); |
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308 ASSERT_EQ(ValueRepresentation_DateTime, |
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309 FromDcmtkBridge::GetValueRepresentation(DicomTag(0x0008, 0x002a) /* AcquisitionDateTime */)); |
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310 ASSERT_EQ(ValueRepresentation_Other, |
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311 FromDcmtkBridge::GetValueRepresentation(DICOM_TAG_PATIENT_ID)); |
1360 | 312 } |
1690 | 313 |
314 | |
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315 |
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316 static const DicomTag REFERENCED_STUDY_SEQUENCE(0x0008, 0x1110); |
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317 static const DicomTag REFERENCED_PATIENT_SEQUENCE(0x0008, 0x1120); |
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318 |
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319 static void CreateSampleJson(Json::Value& a) |
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320 { |
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321 { |
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322 Json::Value b = Json::objectValue; |
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323 b["PatientName"] = "Hello"; |
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324 b["PatientID"] = "World"; |
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325 b["StudyDescription"] = "Toto"; |
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326 a.append(b); |
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327 } |
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328 |
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329 { |
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330 Json::Value b = Json::objectValue; |
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331 b["PatientName"] = "data:application/octet-stream;base64,SGVsbG8y"; // echo -n "Hello2" | base64 |
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332 b["PatientID"] = "World2"; |
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333 a.append(b); |
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334 } |
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335 } |
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336 |
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337 |
1690 | 338 TEST(FromDcmtkBridge, FromJson) |
339 { | |
340 std::auto_ptr<DcmElement> element; | |
341 | |
342 { | |
343 Json::Value a; | |
344 a = "Hello"; | |
1695 | 345 element.reset(FromDcmtkBridge::FromJson(DICOM_TAG_PATIENT_NAME, a, false, Encoding_Utf8)); |
1690 | 346 |
347 Json::Value b; | |
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348 FromDcmtkBridge::ToJson(b, *element, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0, Encoding_Ascii); |
1690 | 349 ASSERT_EQ("Hello", b["0010,0010"].asString()); |
350 } | |
351 | |
352 { | |
353 Json::Value a; | |
354 a = "Hello"; | |
355 // Cannot assign a string to a sequence | |
1695 | 356 ASSERT_THROW(element.reset(FromDcmtkBridge::FromJson(REFERENCED_STUDY_SEQUENCE, a, false, Encoding_Utf8)), OrthancException); |
1690 | 357 } |
358 | |
359 { | |
360 Json::Value a = Json::arrayValue; | |
361 a.append("Hello"); | |
362 // Cannot assign an array to a string | |
1695 | 363 ASSERT_THROW(element.reset(FromDcmtkBridge::FromJson(DICOM_TAG_PATIENT_NAME, a, false, Encoding_Utf8)), OrthancException); |
1690 | 364 } |
365 | |
366 { | |
367 Json::Value a; | |
368 a = "data:application/octet-stream;base64,SGVsbG8="; // echo -n "Hello" | base64 | |
1695 | 369 element.reset(FromDcmtkBridge::FromJson(DICOM_TAG_PATIENT_NAME, a, true, Encoding_Utf8)); |
1690 | 370 |
371 Json::Value b; | |
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372 FromDcmtkBridge::ToJson(b, *element, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0, Encoding_Ascii); |
1690 | 373 ASSERT_EQ("Hello", b["0010,0010"].asString()); |
374 } | |
375 | |
376 { | |
377 Json::Value a = Json::arrayValue; | |
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378 CreateSampleJson(a); |
1695 | 379 element.reset(FromDcmtkBridge::FromJson(REFERENCED_STUDY_SEQUENCE, a, true, Encoding_Utf8)); |
1690 | 380 |
381 { | |
382 Json::Value b; | |
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383 FromDcmtkBridge::ToJson(b, *element, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0, Encoding_Ascii); |
1691 | 384 ASSERT_EQ(Json::arrayValue, b["0008,1110"].type()); |
1970 | 385 ASSERT_EQ(2u, b["0008,1110"].size()); |
1691 | 386 |
387 Json::Value::ArrayIndex i = (b["0008,1110"][0]["0010,0010"].asString() == "Hello") ? 0 : 1; | |
1690 | 388 |
1970 | 389 ASSERT_EQ(3u, b["0008,1110"][i].size()); |
390 ASSERT_EQ(2u, b["0008,1110"][1 - i].size()); | |
1691 | 391 ASSERT_EQ(b["0008,1110"][i]["0010,0010"].asString(), "Hello"); |
392 ASSERT_EQ(b["0008,1110"][i]["0010,0020"].asString(), "World"); | |
393 ASSERT_EQ(b["0008,1110"][i]["0008,1030"].asString(), "Toto"); | |
394 ASSERT_EQ(b["0008,1110"][1 - i]["0010,0010"].asString(), "Hello2"); | |
395 ASSERT_EQ(b["0008,1110"][1 - i]["0010,0020"].asString(), "World2"); | |
1690 | 396 } |
397 | |
1692 | 398 { |
399 Json::Value b; | |
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400 FromDcmtkBridge::ToJson(b, *element, DicomToJsonFormat_Full, DicomToJsonFlags_Default, 0, Encoding_Ascii); |
1690 | 401 |
1692 | 402 Json::Value c; |
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403 Toolbox::SimplifyTags(c, b, DicomToJsonFormat_Human); |
1690 | 404 |
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405 a[1]["PatientName"] = "Hello2"; // To remove the Data URI Scheme encoding |
1692 | 406 ASSERT_EQ(0, c["ReferencedStudySequence"].compare(a)); |
407 } | |
408 } | |
1690 | 409 } |
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410 |
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411 |
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412 |
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413 TEST(ParsedDicomFile, InsertReplaceStrings) |
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414 { |
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415 ParsedDicomFile f(true); |
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416 |
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417 f.Insert(DICOM_TAG_PATIENT_NAME, "World", false); |
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418 ASSERT_THROW(f.Insert(DICOM_TAG_PATIENT_ID, "Hello", false), OrthancException); // Already existing tag |
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419 f.Replace(DICOM_TAG_SOP_INSTANCE_UID, "Toto"); // (*) |
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420 f.Replace(DICOM_TAG_SOP_CLASS_UID, "Tata"); // (**) |
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421 |
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422 std::string s; |
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423 |
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424 ASSERT_THROW(f.Replace(DICOM_TAG_ACCESSION_NUMBER, "Accession", DicomReplaceMode_ThrowIfAbsent), OrthancException); |
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425 f.Replace(DICOM_TAG_ACCESSION_NUMBER, "Accession", DicomReplaceMode_IgnoreIfAbsent); |
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426 ASSERT_FALSE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER)); |
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427 f.Replace(DICOM_TAG_ACCESSION_NUMBER, "Accession", DicomReplaceMode_InsertIfAbsent); |
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428 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER)); |
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429 ASSERT_EQ(s, "Accession"); |
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430 f.Replace(DICOM_TAG_ACCESSION_NUMBER, "Accession2", DicomReplaceMode_IgnoreIfAbsent); |
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431 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER)); |
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432 ASSERT_EQ(s, "Accession2"); |
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433 f.Replace(DICOM_TAG_ACCESSION_NUMBER, "Accession3", DicomReplaceMode_ThrowIfAbsent); |
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434 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER)); |
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435 ASSERT_EQ(s, "Accession3"); |
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436 |
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437 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_PATIENT_NAME)); |
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438 ASSERT_EQ(s, "World"); |
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439 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_INSTANCE_UID)); |
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440 ASSERT_EQ(s, "Toto"); |
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441 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_INSTANCE_UID)); // Implicitly modified by (*) |
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442 ASSERT_EQ(s, "Toto"); |
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443 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_CLASS_UID)); |
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444 ASSERT_EQ(s, "Tata"); |
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445 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_CLASS_UID)); // Implicitly modified by (**) |
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446 ASSERT_EQ(s, "Tata"); |
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447 } |
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448 |
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449 |
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450 |
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451 |
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452 TEST(ParsedDicomFile, InsertReplaceJson) |
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453 { |
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454 ParsedDicomFile f(true); |
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455 |
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456 Json::Value a; |
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457 CreateSampleJson(a); |
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458 |
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459 ASSERT_FALSE(f.HasTag(REFERENCED_STUDY_SEQUENCE)); |
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460 f.Remove(REFERENCED_STUDY_SEQUENCE); // No effect |
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461 f.Insert(REFERENCED_STUDY_SEQUENCE, a, true); |
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462 ASSERT_TRUE(f.HasTag(REFERENCED_STUDY_SEQUENCE)); |
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463 ASSERT_THROW(f.Insert(REFERENCED_STUDY_SEQUENCE, a, true), OrthancException); |
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464 f.Remove(REFERENCED_STUDY_SEQUENCE); |
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465 ASSERT_FALSE(f.HasTag(REFERENCED_STUDY_SEQUENCE)); |
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466 f.Insert(REFERENCED_STUDY_SEQUENCE, a, true); |
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467 ASSERT_TRUE(f.HasTag(REFERENCED_STUDY_SEQUENCE)); |
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468 |
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469 ASSERT_FALSE(f.HasTag(REFERENCED_PATIENT_SEQUENCE)); |
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470 ASSERT_THROW(f.Replace(REFERENCED_PATIENT_SEQUENCE, a, false, DicomReplaceMode_ThrowIfAbsent), OrthancException); |
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471 ASSERT_FALSE(f.HasTag(REFERENCED_PATIENT_SEQUENCE)); |
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472 f.Replace(REFERENCED_PATIENT_SEQUENCE, a, false, DicomReplaceMode_IgnoreIfAbsent); |
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473 ASSERT_FALSE(f.HasTag(REFERENCED_PATIENT_SEQUENCE)); |
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474 f.Replace(REFERENCED_PATIENT_SEQUENCE, a, false, DicomReplaceMode_InsertIfAbsent); |
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475 ASSERT_TRUE(f.HasTag(REFERENCED_PATIENT_SEQUENCE)); |
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476 |
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477 { |
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478 Json::Value b; |
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479 f.ToJson(b, DicomToJsonFormat_Full, DicomToJsonFlags_Default, 0); |
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480 |
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481 Json::Value c; |
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482 Toolbox::SimplifyTags(c, b, DicomToJsonFormat_Human); |
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483 |
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484 ASSERT_EQ(0, c["ReferencedPatientSequence"].compare(a)); |
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485 ASSERT_NE(0, c["ReferencedStudySequence"].compare(a)); // Because Data URI Scheme decoding was enabled |
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486 } |
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487 |
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488 a = "data:application/octet-stream;base64,VGF0YQ=="; // echo -n "Tata" | base64 |
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489 f.Replace(DICOM_TAG_SOP_INSTANCE_UID, a, false); // (*) |
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490 f.Replace(DICOM_TAG_SOP_CLASS_UID, a, true); // (**) |
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491 |
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492 std::string s; |
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493 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_INSTANCE_UID)); |
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494 ASSERT_EQ(s, a.asString()); |
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495 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_INSTANCE_UID)); // Implicitly modified by (*) |
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496 ASSERT_EQ(s, a.asString()); |
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497 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_CLASS_UID)); |
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498 ASSERT_EQ(s, "Tata"); |
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499 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_CLASS_UID)); // Implicitly modified by (**) |
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500 ASSERT_EQ(s, "Tata"); |
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501 } |
1695 | 502 |
503 | |
504 TEST(ParsedDicomFile, JsonEncoding) | |
505 { | |
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506 ParsedDicomFile f(true); |
1695 | 507 |
508 for (unsigned int i = 0; i < testEncodingsCount; i++) | |
509 { | |
510 if (testEncodings[i] != Encoding_Windows1251) | |
511 { | |
512 //std::cout << EnumerationToString(testEncodings[i]) << std::endl; | |
513 f.SetEncoding(testEncodings[i]); | |
514 | |
515 if (testEncodings[i] != Encoding_Ascii) | |
516 { | |
517 ASSERT_EQ(testEncodings[i], f.GetEncoding()); | |
518 } | |
519 | |
520 Json::Value s = Toolbox::ConvertToUtf8(testEncodingsEncoded[i], testEncodings[i]); | |
521 f.Replace(DICOM_TAG_PATIENT_NAME, s, false); | |
522 | |
523 Json::Value v; | |
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524 f.ToJson(v, DicomToJsonFormat_Human, DicomToJsonFlags_Default, 0); |
1695 | 525 ASSERT_EQ(v["PatientName"].asString(), std::string(testEncodingsExpected[i])); |
526 } | |
527 } | |
528 } | |
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529 |
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530 |
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531 TEST(ParsedDicomFile, ToJsonFlags1) |
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532 { |
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533 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7053, 0x1000), EVR_PN, "MyPrivateTag", 1, 1); |
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534 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7050, 0x1000), EVR_PN, "Declared public tag", 1, 1); |
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535 |
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536 ParsedDicomFile f(true); |
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537 f.Insert(DicomTag(0x7050, 0x1000), "Some public tag", false); // Even group => public tag |
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538 f.Insert(DicomTag(0x7052, 0x1000), "Some unknown tag", false); // Even group => public, unknown tag |
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539 f.Insert(DicomTag(0x7053, 0x1000), "Some private tag", false); // Odd group => private tag |
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540 |
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541 Json::Value v; |
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542 f.ToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_None, 0); |
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543 ASSERT_EQ(Json::objectValue, v.type()); |
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544 ASSERT_EQ(6u, v.getMemberNames().size()); |
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545 ASSERT_FALSE(v.isMember("7052,1000")); |
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546 ASSERT_FALSE(v.isMember("7053,1000")); |
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547 ASSERT_TRUE(v.isMember("7050,1000")); |
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548 ASSERT_EQ(Json::stringValue, v["7050,1000"].type()); |
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549 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
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550 |
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551 f.ToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePrivateTags | DicomToJsonFlags_ConvertBinaryToNull), 0); |
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552 ASSERT_EQ(Json::objectValue, v.type()); |
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553 ASSERT_EQ(7u, v.getMemberNames().size()); |
1818
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ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
554 ASSERT_FALSE(v.isMember("7052,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
555 ASSERT_TRUE(v.isMember("7050,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
556 ASSERT_TRUE(v.isMember("7053,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
557 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
558 ASSERT_EQ(Json::nullValue, v["7053,1000"].type()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
559 |
1739
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include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
560 f.ToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_IncludePrivateTags, 0); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
561 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
562 ASSERT_EQ(7u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
563 ASSERT_FALSE(v.isMember("7052,1000")); |
df331354cea2
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
564 ASSERT_TRUE(v.isMember("7050,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
565 ASSERT_TRUE(v.isMember("7053,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
566 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
567 std::string mime, content; |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
568 ASSERT_EQ(Json::stringValue, v["7053,1000"].type()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
569 Toolbox::DecodeDataUriScheme(mime, content, v["7053,1000"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
570 ASSERT_EQ("application/octet-stream", mime); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
571 ASSERT_EQ("Some private tag", content); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
572 |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
573 f.ToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeUnknownTags | DicomToJsonFlags_ConvertBinaryToNull), 0); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
574 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
575 ASSERT_EQ(7u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
576 ASSERT_TRUE(v.isMember("7050,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
577 ASSERT_TRUE(v.isMember("7052,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
578 ASSERT_FALSE(v.isMember("7053,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
579 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
580 ASSERT_EQ(Json::nullValue, v["7052,1000"].type()); |
1735
a001f6226c7c
primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
581 |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
582 f.ToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeUnknownTags), 0); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
583 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
584 ASSERT_EQ(7u, v.getMemberNames().size()); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
585 ASSERT_TRUE(v.isMember("7050,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
586 ASSERT_TRUE(v.isMember("7052,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
587 ASSERT_FALSE(v.isMember("7053,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
588 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
589 ASSERT_EQ(Json::stringValue, v["7052,1000"].type()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
590 Toolbox::DecodeDataUriScheme(mime, content, v["7052,1000"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
591 ASSERT_EQ("application/octet-stream", mime); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
592 ASSERT_EQ("Some unknown tag", content); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
593 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
594 f.ToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeUnknownTags | DicomToJsonFlags_IncludePrivateTags | DicomToJsonFlags_ConvertBinaryToNull), 0); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
595 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
596 ASSERT_EQ(8u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
597 ASSERT_TRUE(v.isMember("7050,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
598 ASSERT_TRUE(v.isMember("7052,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
599 ASSERT_TRUE(v.isMember("7053,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
600 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
601 ASSERT_EQ(Json::nullValue, v["7052,1000"].type()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
602 ASSERT_EQ(Json::nullValue, v["7053,1000"].type()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
603 } |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
604 |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
605 |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
606 TEST(ParsedDicomFile, ToJsonFlags2) |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
607 { |
1805
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1789
diff
changeset
|
608 ParsedDicomFile f(true); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
609 f.Insert(DICOM_TAG_PIXEL_DATA, "Pixels", false); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
610 |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
611 Json::Value v; |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
612 f.ToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_None, 0); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
613 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
614 ASSERT_EQ(5u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
615 ASSERT_FALSE(v.isMember("7fe0,0010")); |
1736
b953c6eef28d
ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1735
diff
changeset
|
616 |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
617 f.ToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePixelData | DicomToJsonFlags_ConvertBinaryToNull), 0); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
618 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
619 ASSERT_EQ(6u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
620 ASSERT_TRUE(v.isMember("7fe0,0010")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
621 ASSERT_EQ(Json::nullValue, v["7fe0,0010"].type()); |
1736
b953c6eef28d
ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1735
diff
changeset
|
622 |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
623 f.ToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePixelData | DicomToJsonFlags_ConvertBinaryToAscii), 0); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
624 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
625 ASSERT_EQ(6u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
626 ASSERT_TRUE(v.isMember("7fe0,0010")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
627 ASSERT_EQ(Json::stringValue, v["7fe0,0010"].type()); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
628 ASSERT_EQ("Pixels", v["7fe0,0010"].asString()); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
629 |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
630 f.ToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_IncludePixelData, 0); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
631 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
632 ASSERT_EQ(6u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
633 ASSERT_TRUE(v.isMember("7fe0,0010")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
634 ASSERT_EQ(Json::stringValue, v["7fe0,0010"].type()); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
635 std::string mime, content; |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
636 Toolbox::DecodeDataUriScheme(mime, content, v["7fe0,0010"].asString()); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
637 ASSERT_EQ("application/octet-stream", mime); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
638 ASSERT_EQ("Pixels", content); |
1735
a001f6226c7c
primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
639 } |
1787
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
640 |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
641 |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
642 TEST(DicomFindAnswers, Basic) |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
643 { |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
644 DicomFindAnswers a; |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
645 |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
646 { |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
647 DicomMap m; |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
648 m.SetValue(DICOM_TAG_PATIENT_ID, "hello"); |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
649 a.Add(m); |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
650 } |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
651 |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
652 { |
1805
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1789
diff
changeset
|
653 ParsedDicomFile d(true); |
1789 | 654 d.Replace(DICOM_TAG_PATIENT_ID, "my"); |
655 a.Add(d); | |
656 } | |
657 | |
658 { | |
1787
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
659 DicomMap m; |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
660 m.SetValue(DICOM_TAG_PATIENT_ID, "world"); |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
661 a.Add(m); |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
662 } |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
663 |
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664 Json::Value j; |
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665 a.ToJson(j, true); |
1789 | 666 ASSERT_EQ(3u, j.size()); |
667 | |
668 //std::cout << j; | |
1787
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669 } |
1818
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670 |
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671 |
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672 TEST(ParsedDicomFile, FromJson) |
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673 { |
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674 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7057, 0x1000), EVR_OB, "MyPrivateTag", 1, 1); |
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675 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7059, 0x1000), EVR_OB, "MyPrivateTag", 1, 1); |
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676 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7050, 0x1000), EVR_PN, "Declared public tag", 1, 1); |
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677 |
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678 Json::Value v; |
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679 const std::string sopClassUid = "1.2.840.10008.5.1.4.1.1.1"; // CR Image Storage: |
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680 |
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681 { |
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682 v["SOPClassUID"] = sopClassUid; |
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683 v["SpecificCharacterSet"] = "ISO_IR 148"; // This is latin-5 |
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684 v["PatientName"] = "Sébastien"; |
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685 v["7050-1000"] = "Some public tag"; // Even group => public tag |
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686 v["7052-1000"] = "Some unknown tag"; // Even group => public, unknown tag |
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687 v["7057-1000"] = "Some private tag"; // Odd group => private tag |
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688 v["7059-1000"] = "Some private tag2"; // Odd group => private tag, with an odd length to test padding |
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689 |
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690 std::string s; |
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691 Toolbox::EncodeDataUriScheme(s, "application/octet-stream", "Sebastien"); |
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692 v["StudyDescription"] = s; |
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693 |
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694 v["PixelData"] = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg=="; // A red dot of 5x5 pixels |
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695 v["0040,0100"] = Json::arrayValue; // ScheduledProcedureStepSequence |
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696 |
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697 Json::Value vv; |
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698 vv["Modality"] = "MR"; |
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699 v["0040,0100"].append(vv); |
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700 |
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701 vv["Modality"] = "CT"; |
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702 v["0040,0100"].append(vv); |
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703 } |
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704 |
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705 const DicomToJsonFlags toJsonFlags = static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeBinary | |
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706 DicomToJsonFlags_IncludePixelData | |
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707 DicomToJsonFlags_IncludePrivateTags | |
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708 DicomToJsonFlags_IncludeUnknownTags | |
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709 DicomToJsonFlags_ConvertBinaryToAscii); |
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710 |
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|
711 |
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712 { |
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713 std::auto_ptr<ParsedDicomFile> dicom |
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ParsedDicomFile::CreateFromJson
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714 (ParsedDicomFile::CreateFromJson(v, static_cast<DicomFromJsonFlags>(DicomFromJsonFlags_GenerateIdentifiers))); |
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ParsedDicomFile::CreateFromJson
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|
715 |
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ParsedDicomFile::CreateFromJson
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|
716 Json::Value vv; |
1860
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diff
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|
717 dicom->ToJson(vv, DicomToJsonFormat_Human, toJsonFlags, 0); |
1818
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|
718 |
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719 ASSERT_EQ(vv["SOPClassUID"].asString(), sopClassUid); |
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720 ASSERT_EQ(vv["MediaStorageSOPClassUID"].asString(), sopClassUid); |
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ParsedDicomFile::CreateFromJson
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721 ASSERT_TRUE(vv.isMember("SOPInstanceUID")); |
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ParsedDicomFile::CreateFromJson
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|
722 ASSERT_TRUE(vv.isMember("SeriesInstanceUID")); |
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ParsedDicomFile::CreateFromJson
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|
723 ASSERT_TRUE(vv.isMember("StudyInstanceUID")); |
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724 ASSERT_TRUE(vv.isMember("PatientID")); |
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ParsedDicomFile::CreateFromJson
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|
725 } |
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|
726 |
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diff
changeset
|
727 |
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changeset
|
728 { |
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changeset
|
729 std::auto_ptr<ParsedDicomFile> dicom |
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ParsedDicomFile::CreateFromJson
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|
730 (ParsedDicomFile::CreateFromJson(v, static_cast<DicomFromJsonFlags>(DicomFromJsonFlags_GenerateIdentifiers))); |
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ParsedDicomFile::CreateFromJson
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|
731 |
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ParsedDicomFile::CreateFromJson
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changeset
|
732 Json::Value vv; |
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diff
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|
733 dicom->ToJson(vv, DicomToJsonFormat_Human, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePixelData), 0); |
1818
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ParsedDicomFile::CreateFromJson
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|
734 |
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ParsedDicomFile::CreateFromJson
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|
735 std::string mime, content; |
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ParsedDicomFile::CreateFromJson
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|
736 Toolbox::DecodeDataUriScheme(mime, content, vv["PixelData"].asString()); |
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ParsedDicomFile::CreateFromJson
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|
737 ASSERT_EQ("application/octet-stream", mime); |
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|
738 ASSERT_EQ(5u * 5u * 3u /* the red dot is 5x5 pixels in RGB24 */ + 1 /* for padding */, content.size()); |
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|
739 } |
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|
740 |
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|
741 |
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|
742 { |
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|
743 std::auto_ptr<ParsedDicomFile> dicom |
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ParsedDicomFile::CreateFromJson
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|
744 (ParsedDicomFile::CreateFromJson(v, static_cast<DicomFromJsonFlags>(DicomFromJsonFlags_DecodeDataUriScheme))); |
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|
745 |
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|
746 Json::Value vv; |
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ParsedDicomFile::CreateFromJson
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|
747 dicom->ToJson(vv, DicomToJsonFormat_Short, toJsonFlags, 0); |
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|
748 |
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|
749 ASSERT_FALSE(vv.isMember("SOPInstanceUID")); |
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ParsedDicomFile::CreateFromJson
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750 ASSERT_FALSE(vv.isMember("SeriesInstanceUID")); |
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ParsedDicomFile::CreateFromJson
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|
751 ASSERT_FALSE(vv.isMember("StudyInstanceUID")); |
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ParsedDicomFile::CreateFromJson
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|
752 ASSERT_FALSE(vv.isMember("PatientID")); |
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ParsedDicomFile::CreateFromJson
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|
753 ASSERT_EQ(2u, vv["0040,0100"].size()); |
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754 ASSERT_EQ("MR", vv["0040,0100"][0]["0008,0060"].asString()); |
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|
755 ASSERT_EQ("CT", vv["0040,0100"][1]["0008,0060"].asString()); |
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|
756 ASSERT_EQ("Some public tag", vv["7050,1000"].asString()); |
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ParsedDicomFile::CreateFromJson
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|
757 ASSERT_EQ("Some unknown tag", vv["7052,1000"].asString()); |
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ParsedDicomFile::CreateFromJson
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|
758 ASSERT_EQ("Some private tag", vv["7057,1000"].asString()); |
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|
759 ASSERT_EQ("Some private tag2", vv["7059,1000"].asString()); |
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ParsedDicomFile::CreateFromJson
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|
760 ASSERT_EQ("Sébastien", vv["0010,0010"].asString()); |
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ParsedDicomFile::CreateFromJson
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|
761 ASSERT_EQ("Sebastien", vv["0008,1030"].asString()); |
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ParsedDicomFile::CreateFromJson
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|
762 ASSERT_EQ("ISO_IR 148", vv["0008,0005"].asString()); |
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ParsedDicomFile::CreateFromJson
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|
763 ASSERT_EQ("5", vv[DICOM_TAG_ROWS.Format()].asString()); |
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ParsedDicomFile::CreateFromJson
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|
764 ASSERT_EQ("5", vv[DICOM_TAG_COLUMNS.Format()].asString()); |
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ParsedDicomFile::CreateFromJson
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|
765 ASSERT_TRUE(vv[DICOM_TAG_PIXEL_DATA.Format()].asString().empty()); |
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ParsedDicomFile::CreateFromJson
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|
766 } |
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|
767 } |
1937 | 768 |
769 | |
770 | |
1941
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test dicom patterns
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diff
changeset
|
771 TEST(TestImages, PatternGrayscale8) |
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test dicom patterns
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diff
changeset
|
772 { |
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diff
changeset
|
773 static const char* PATH = "UnitTestsResults/PatternGrayscale8.dcm"; |
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test dicom patterns
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diff
changeset
|
774 |
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test dicom patterns
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diff
changeset
|
775 Orthanc::Image image(Orthanc::PixelFormat_Grayscale8, 256, 256); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
776 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
777 for (int y = 0; y < 256; y++) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
778 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
779 uint8_t *p = reinterpret_cast<uint8_t*>(image.GetRow(y)); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
780 for (int x = 0; x < 256; x++, p++) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
781 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
782 *p = y; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
783 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
784 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
785 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
786 Orthanc::ImageAccessor r = image.GetRegion(32, 32, 64, 192); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
787 Orthanc::ImageProcessing::Set(r, 0); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
788 r = image.GetRegion(160, 32, 64, 192); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
789 Orthanc::ImageProcessing::Set(r, 255); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
790 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
791 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
792 ParsedDicomFile f(true); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
793 f.Replace(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
794 f.Replace(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
795 f.Replace(DICOM_TAG_PATIENT_ID, "ORTHANC"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
796 f.Replace(DICOM_TAG_PATIENT_NAME, "Orthanc"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
797 f.Replace(DICOM_TAG_STUDY_DESCRIPTION, "Patterns"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
798 f.Replace(DICOM_TAG_SERIES_DESCRIPTION, "Grayscale8"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
799 f.EmbedImage(image); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
800 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
801 f.SaveToFile(PATH); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
802 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
803 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
804 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
805 std::string s; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
806 Orthanc::Toolbox::ReadFile(s, PATH); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
807 Orthanc::ParsedDicomFile f(s); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
808 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
809 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0)); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
810 ASSERT_EQ(256u, decoded->GetWidth()); |
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
811 ASSERT_EQ(256u, decoded->GetHeight()); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
812 ASSERT_EQ(Orthanc::PixelFormat_Grayscale8, decoded->GetFormat()); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
813 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
814 for (int y = 0; y < 256; y++) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
815 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
816 const void* a = image.GetConstRow(y); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
817 const void* b = decoded->GetConstRow(y); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
818 ASSERT_EQ(0, memcmp(a, b, 256)); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
819 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
820 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
821 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
822 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
823 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
824 TEST(TestImages, PatternRGB) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
825 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
826 static const char* PATH = "UnitTestsResults/PatternRGB24.dcm"; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
827 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
828 Orthanc::Image image(Orthanc::PixelFormat_RGB24, 384, 256); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
829 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
830 for (int y = 0; y < 256; y++) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
831 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
832 uint8_t *p = reinterpret_cast<uint8_t*>(image.GetRow(y)); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
833 for (int x = 0; x < 128; x++, p += 3) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
834 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
835 p[0] = y; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
836 p[1] = 0; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
837 p[2] = 0; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
838 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
839 for (int x = 128; x < 128 * 2; x++, p += 3) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
840 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
841 p[0] = 0; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
842 p[1] = 255 - y; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
843 p[2] = 0; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
844 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
845 for (int x = 128 * 2; x < 128 * 3; x++, p += 3) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
846 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
847 p[0] = 0; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
848 p[1] = 0; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
849 p[2] = y; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
850 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
851 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
852 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
853 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
854 ParsedDicomFile f(true); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
855 f.Replace(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
856 f.Replace(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
857 f.Replace(DICOM_TAG_PATIENT_ID, "ORTHANC"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
858 f.Replace(DICOM_TAG_PATIENT_NAME, "Orthanc"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
859 f.Replace(DICOM_TAG_STUDY_DESCRIPTION, "Patterns"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
860 f.Replace(DICOM_TAG_SERIES_DESCRIPTION, "RGB24"); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
861 f.EmbedImage(image); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
862 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
863 f.SaveToFile(PATH); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
864 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
865 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
866 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
867 std::string s; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
868 Orthanc::Toolbox::ReadFile(s, PATH); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
869 Orthanc::ParsedDicomFile f(s); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
870 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
871 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0)); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
872 ASSERT_EQ(384u, decoded->GetWidth()); |
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
873 ASSERT_EQ(256u, decoded->GetHeight()); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
874 ASSERT_EQ(Orthanc::PixelFormat_RGB24, decoded->GetFormat()); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
875 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
876 for (int y = 0; y < 256; y++) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
877 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
878 const void* a = image.GetConstRow(y); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
879 const void* b = decoded->GetConstRow(y); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
880 ASSERT_EQ(0, memcmp(a, b, 3 * 384)); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
881 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
882 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
883 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
884 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
885 |
1940 | 886 TEST(TestImages, PatternUint16) |
1937 | 887 { |
1940 | 888 static const char* PATH = "UnitTestsResults/PatternGrayscale16.dcm"; |
889 | |
1937 | 890 Orthanc::Image image(Orthanc::PixelFormat_Grayscale16, 256, 256); |
891 | |
892 uint16_t v = 0; | |
893 for (int y = 0; y < 256; y++) | |
894 { | |
895 uint16_t *p = reinterpret_cast<uint16_t*>(image.GetRow(y)); | |
896 for (int x = 0; x < 256; x++, v++, p++) | |
897 { | |
1940 | 898 *p = htole16(v); // Orthanc uses Little-Endian transfer syntax to encode images |
1937 | 899 } |
900 } | |
901 | |
1940 | 902 Orthanc::ImageAccessor r = image.GetRegion(32, 32, 64, 192); |
903 Orthanc::ImageProcessing::Set(r, 0); | |
904 r = image.GetRegion(160, 32, 64, 192); | |
905 Orthanc::ImageProcessing::Set(r, 65535); | |
906 | |
907 { | |
908 ParsedDicomFile f(true); | |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
909 f.Replace(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7"); |
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diff
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910 f.Replace(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998"); |
1940 | 911 f.Replace(DICOM_TAG_PATIENT_ID, "ORTHANC"); |
912 f.Replace(DICOM_TAG_PATIENT_NAME, "Orthanc"); | |
913 f.Replace(DICOM_TAG_STUDY_DESCRIPTION, "Patterns"); | |
914 f.Replace(DICOM_TAG_SERIES_DESCRIPTION, "Grayscale16"); | |
915 f.EmbedImage(image); | |
916 | |
917 f.SaveToFile(PATH); | |
918 } | |
1937 | 919 |
1940 | 920 { |
921 std::string s; | |
922 Orthanc::Toolbox::ReadFile(s, PATH); | |
923 Orthanc::ParsedDicomFile f(s); | |
924 | |
925 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0)); | |
1971
869a87c08673
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parents:
1970
diff
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926 ASSERT_EQ(256u, decoded->GetWidth()); |
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parents:
1970
diff
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927 ASSERT_EQ(256u, decoded->GetHeight()); |
1940 | 928 ASSERT_EQ(Orthanc::PixelFormat_Grayscale16, decoded->GetFormat()); |
929 | |
930 for (int y = 0; y < 256; y++) | |
931 { | |
932 const void* a = image.GetConstRow(y); | |
933 const void* b = decoded->GetConstRow(y); | |
934 ASSERT_EQ(0, memcmp(a, b, 512)); | |
935 } | |
936 } | |
1937 | 937 } |
1941
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938 |
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|
939 |
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940 TEST(TestImages, PatternInt16) |
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diff
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941 { |
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942 static const char* PATH = "UnitTestsResults/PatternSignedGrayscale16.dcm"; |
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parents:
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diff
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|
943 |
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|
944 Orthanc::Image image(Orthanc::PixelFormat_SignedGrayscale16, 256, 256); |
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parents:
1940
diff
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|
945 |
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parents:
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diff
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|
946 int16_t v = -32768; |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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947 for (int y = 0; y < 256; y++) |
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diff
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|
948 { |
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|
949 int16_t *p = reinterpret_cast<int16_t*>(image.GetRow(y)); |
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parents:
1940
diff
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950 for (int x = 0; x < 256; x++, v++, p++) |
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diff
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|
951 { |
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|
952 *p = htole16(v); // Orthanc uses Little-Endian transfer syntax to encode images |
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diff
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|
953 } |
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parents:
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diff
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|
954 } |
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diff
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|
955 |
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parents:
1940
diff
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|
956 Orthanc::ImageAccessor r = image.GetRegion(32, 32, 64, 192); |
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parents:
1940
diff
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|
957 Orthanc::ImageProcessing::Set(r, -32768); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
958 r = image.GetRegion(160, 32, 64, 192); |
d7b176f7dd1b
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parents:
1940
diff
changeset
|
959 Orthanc::ImageProcessing::Set(r, 32767); |
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parents:
1940
diff
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|
960 |
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parents:
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diff
changeset
|
961 { |
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parents:
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diff
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|
962 ParsedDicomFile f(true); |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
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963 f.Replace(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7"); |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
964 f.Replace(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998"); |
d7b176f7dd1b
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parents:
1940
diff
changeset
|
965 f.Replace(DICOM_TAG_PATIENT_ID, "ORTHANC"); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
966 f.Replace(DICOM_TAG_PATIENT_NAME, "Orthanc"); |
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parents:
1940
diff
changeset
|
967 f.Replace(DICOM_TAG_STUDY_DESCRIPTION, "Patterns"); |
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parents:
1940
diff
changeset
|
968 f.Replace(DICOM_TAG_SERIES_DESCRIPTION, "SignedGrayscale16"); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
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|
969 f.EmbedImage(image); |
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parents:
1940
diff
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|
970 |
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parents:
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diff
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|
971 f.SaveToFile(PATH); |
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parents:
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diff
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|
972 } |
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diff
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|
973 |
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1940
diff
changeset
|
974 { |
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parents:
1940
diff
changeset
|
975 std::string s; |
d7b176f7dd1b
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parents:
1940
diff
changeset
|
976 Orthanc::Toolbox::ReadFile(s, PATH); |
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parents:
1940
diff
changeset
|
977 Orthanc::ParsedDicomFile f(s); |
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diff
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|
978 |
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parents:
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diff
changeset
|
979 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0)); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
980 ASSERT_EQ(256u, decoded->GetWidth()); |
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
981 ASSERT_EQ(256u, decoded->GetHeight()); |
1941
d7b176f7dd1b
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parents:
1940
diff
changeset
|
982 ASSERT_EQ(Orthanc::PixelFormat_SignedGrayscale16, decoded->GetFormat()); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
983 |
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parents:
1940
diff
changeset
|
984 for (int y = 0; y < 256; y++) |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
985 { |
d7b176f7dd1b
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parents:
1940
diff
changeset
|
986 const void* a = image.GetConstRow(y); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
987 const void* b = decoded->GetConstRow(y); |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
988 ASSERT_EQ(0, memcmp(a, b, 512)); |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
989 } |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
990 } |
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1940
diff
changeset
|
991 } |