Mercurial > hg > orthanc
annotate OrthancServer/Sources/Database/StatelessDatabaseOperations.h @ 5681:77875b51cf95 find-refactoring
integration mainline->find-refactoring
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Tue, 09 Jul 2024 10:15:15 +0200 |
parents | 527918e9c5d9 68fc5af30c03 |
children | f488fc5c972a 89d559e67b03 |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2023 Osimis S.A., Belgium |
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6 * Copyright (C) 2024-2024 Orthanc Team SRL, Belgium |
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7 * Copyright (C) 2021-2024 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
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8 * |
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9 * This program is free software: you can redistribute it and/or |
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10 * modify it under the terms of the GNU General Public License as |
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11 * published by the Free Software Foundation, either version 3 of the |
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12 * License, or (at your option) any later version. |
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13 * |
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14 * This program is distributed in the hope that it will be useful, but |
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15 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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16 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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17 * General Public License for more details. |
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18 * |
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19 * You should have received a copy of the GNU General Public License |
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20 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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21 **/ |
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22 |
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23 |
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24 #pragma once |
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25 |
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26 #include "../../../OrthancFramework/Sources/DicomFormat/DicomMap.h" |
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27 |
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28 #include "../DicomInstanceOrigin.h" |
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29 #include "IDatabaseWrapper.h" |
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30 #include "MainDicomTagsRegistry.h" |
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31 |
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32 #include <boost/shared_ptr.hpp> |
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33 #include <boost/thread/shared_mutex.hpp> |
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34 |
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35 |
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36 namespace Orthanc |
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37 { |
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38 class DatabaseLookup; |
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39 class ParsedDicomFile; |
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41 |
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42 class ExpandedResource : public boost::noncopyable |
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43 { |
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44 private: |
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45 std::string id_; |
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46 ResourceType level_; |
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47 DicomMap tags_; // all main tags and main sequences from DB |
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48 |
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49 public: |
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50 std::string mainDicomTagsSignature_; |
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51 std::string parentId_; |
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52 std::list<std::string> childrenIds_; |
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53 std::map<MetadataType, std::string> metadata_; |
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54 std::string anonymizedFrom_; |
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55 std::string modifiedFrom_; |
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56 std::string lastUpdate_; |
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57 std::set<DicomTag> missingRequestedTags_; |
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58 |
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59 // for patients/studies/series |
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60 bool isStable_; |
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61 |
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62 // for series only |
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63 int expectedNumberOfInstances_; |
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64 std::string status_; |
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65 |
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66 // for instances only |
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67 size_t fileSize_; |
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68 std::string fileUuid_; |
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69 int indexInSeries_; |
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70 |
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71 // New in Orthanc 1.12.0 |
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72 std::set<std::string> labels_; |
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73 |
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74 public: |
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76 ExpandedResource() : | |
77 level_(ResourceType_Instance), | |
78 isStable_(false), | |
79 expectedNumberOfInstances_(0), | |
80 fileSize_(0), | |
81 indexInSeries_(0) | |
82 { | |
83 } | |
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84 |
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85 void SetResource(ResourceType level, |
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86 const std::string& id) |
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87 { |
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88 level_ = level; |
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89 id_ = id; |
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90 } |
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91 |
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92 const std::string& GetPublicId() const |
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93 { |
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94 return id_; |
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95 } |
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96 |
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97 ResourceType GetLevel() const |
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98 { |
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99 return level_; |
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100 } |
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101 |
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102 DicomMap& GetMainDicomTags() |
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103 { |
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104 return tags_; |
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105 } |
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106 |
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107 const DicomMap& GetMainDicomTags() const |
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108 { |
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109 return tags_; |
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110 } |
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111 }; |
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112 |
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113 enum ExpandResourceFlags |
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114 { |
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115 ExpandResourceFlags_None = 0, |
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116 // used to fetch from DB and for output |
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117 ExpandResourceFlags_IncludeMetadata = (1 << 0), |
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118 ExpandResourceFlags_IncludeChildren = (1 << 1), |
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119 ExpandResourceFlags_IncludeMainDicomTags = (1 << 2), |
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120 ExpandResourceFlags_IncludeLabels = (1 << 3), |
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121 |
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122 // only used for output |
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123 ExpandResourceFlags_IncludeAllMetadata = (1 << 4), // new in Orthanc 1.12.4 |
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124 ExpandResourceFlags_IncludeIsStable = (1 << 5), // new in Orthanc 1.12.4 |
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125 |
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126 ExpandResourceFlags_DefaultExtract = (ExpandResourceFlags_IncludeMetadata | |
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127 ExpandResourceFlags_IncludeChildren | |
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128 ExpandResourceFlags_IncludeMainDicomTags | |
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129 ExpandResourceFlags_IncludeLabels), |
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130 |
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131 ExpandResourceFlags_DefaultOutput = (ExpandResourceFlags_IncludeMetadata | |
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132 ExpandResourceFlags_IncludeChildren | |
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133 ExpandResourceFlags_IncludeMainDicomTags | |
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134 ExpandResourceFlags_IncludeLabels | |
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135 ExpandResourceFlags_IncludeIsStable) |
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136 }; |
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137 |
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138 class StatelessDatabaseOperations : public boost::noncopyable |
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139 { |
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140 public: |
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141 typedef std::list<FileInfo> Attachments; |
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142 typedef std::map<std::pair<ResourceType, MetadataType>, std::string> MetadataMap; |
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143 |
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144 enum LabelOperation |
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145 { |
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146 LabelOperation_Add, |
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147 LabelOperation_Remove |
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148 }; |
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149 |
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150 class ITransactionContext : public IDatabaseListener |
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151 { |
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152 public: |
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153 virtual ~ITransactionContext() |
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154 { |
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155 } |
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156 |
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157 virtual void Commit() = 0; |
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158 |
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159 virtual int64_t GetCompressedSizeDelta() = 0; |
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160 |
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161 virtual bool IsUnstableResource(Orthanc::ResourceType type, |
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162 int64_t id) = 0; |
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163 |
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164 virtual bool LookupRemainingLevel(std::string& remainingPublicId /* out */, |
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165 ResourceType& remainingLevel /* out */) = 0; |
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166 |
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167 virtual void MarkAsUnstable(Orthanc::ResourceType type, |
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168 int64_t id, |
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169 const std::string& publicId) = 0; |
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170 |
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171 virtual void SignalAttachmentsAdded(uint64_t compressedSize) = 0; |
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172 |
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173 virtual void SignalChange(const ServerIndexChange& change) = 0; |
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174 }; |
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175 |
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176 |
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177 class ITransactionContextFactory : public boost::noncopyable |
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178 { |
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179 public: |
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180 virtual ~ITransactionContextFactory() |
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181 { |
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182 } |
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183 |
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184 // WARNING: This method can be invoked from several threads concurrently |
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185 virtual ITransactionContext* Create() = 0; |
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186 }; |
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187 |
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188 |
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189 class ReadOnlyTransaction : public boost::noncopyable |
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190 { |
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191 private: |
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192 ITransactionContext& context_; |
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193 |
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194 protected: |
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195 IDatabaseWrapper::ITransaction& transaction_; |
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196 |
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197 public: |
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198 explicit ReadOnlyTransaction(IDatabaseWrapper::ITransaction& transaction, |
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199 ITransactionContext& context) : |
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200 context_(context), |
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201 transaction_(transaction) |
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202 { |
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203 } |
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204 |
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205 ITransactionContext& GetTransactionContext() |
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206 { |
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207 return context_; |
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208 } |
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209 |
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210 /** |
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211 * Higher-level constructions |
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212 **/ |
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213 |
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214 SeriesStatus GetSeriesStatus(int64_t id, |
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215 int64_t expectedNumberOfInstances); |
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216 |
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217 |
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218 /** |
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219 * Read-only methods from "IDatabaseWrapper" |
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220 **/ |
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221 |
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222 void ApplyLookupResources(std::list<std::string>& resourcesId, |
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223 std::list<std::string>* instancesId, // Can be NULL if not needed |
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224 const DatabaseConstraints& lookup, |
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225 ResourceType queryLevel, |
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226 const std::set<std::string>& labels, // New in Orthanc 1.12.0 |
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227 LabelsConstraint labelsConstraint, // New in Orthanc 1.12.0 |
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228 uint32_t limit) |
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229 { |
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230 return transaction_.ApplyLookupResources(resourcesId, instancesId, lookup, queryLevel, |
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231 labels, labelsConstraint, limit); |
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232 } |
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233 |
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234 void GetAllMetadata(std::map<MetadataType, std::string>& target, |
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235 int64_t id) |
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236 { |
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237 transaction_.GetAllMetadata(target, id); |
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238 } |
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239 |
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240 void GetAllPublicIds(std::list<std::string>& target, |
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241 ResourceType resourceType) |
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242 { |
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243 return transaction_.GetAllPublicIds(target, resourceType); |
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244 } |
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245 |
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246 void GetAllPublicIds(std::list<std::string>& target, |
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247 ResourceType resourceType, |
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248 size_t since, |
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249 uint32_t limit) |
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250 { |
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251 return transaction_.GetAllPublicIds(target, resourceType, since, limit); |
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252 } |
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253 |
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254 void GetChanges(std::list<ServerIndexChange>& target /*out*/, |
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255 bool& done /*out*/, |
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256 int64_t since, |
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257 uint32_t limit) |
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258 { |
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259 transaction_.GetChanges(target, done, since, limit); |
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260 } |
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261 |
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262 void GetChildrenInternalId(std::list<int64_t>& target, |
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263 int64_t id) |
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264 { |
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265 transaction_.GetChildrenInternalId(target, id); |
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266 } |
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267 |
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268 void GetChildrenPublicId(std::list<std::string>& target, |
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269 int64_t id) |
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270 { |
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271 transaction_.GetChildrenPublicId(target, id); |
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272 } |
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273 |
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274 void GetExportedResources(std::list<ExportedResource>& target /*out*/, |
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275 bool& done /*out*/, |
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276 int64_t since, |
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277 uint32_t limit) |
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278 { |
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279 return transaction_.GetExportedResources(target, done, since, limit); |
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280 } |
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281 |
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282 void GetLastChange(std::list<ServerIndexChange>& target /*out*/) |
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283 { |
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284 transaction_.GetLastChange(target); |
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285 } |
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286 |
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287 void GetLastExportedResource(std::list<ExportedResource>& target /*out*/) |
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288 { |
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289 return transaction_.GetLastExportedResource(target); |
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290 } |
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291 |
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292 int64_t GetLastChangeIndex() |
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293 { |
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294 return transaction_.GetLastChangeIndex(); |
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295 } |
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296 |
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297 void GetMainDicomTags(DicomMap& map, |
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298 int64_t id) |
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299 { |
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300 transaction_.GetMainDicomTags(map, id); |
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301 } |
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302 |
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303 std::string GetPublicId(int64_t resourceId) |
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304 { |
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305 return transaction_.GetPublicId(resourceId); |
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306 } |
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307 |
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308 uint64_t GetResourcesCount(ResourceType resourceType) |
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309 { |
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310 return transaction_.GetResourcesCount(resourceType); |
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311 } |
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312 |
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313 ResourceType GetResourceType(int64_t resourceId) |
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314 { |
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315 return transaction_.GetResourceType(resourceId); |
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316 } |
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317 |
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318 uint64_t GetTotalCompressedSize() |
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319 { |
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320 return transaction_.GetTotalCompressedSize(); |
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321 } |
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322 |
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323 uint64_t GetTotalUncompressedSize() |
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324 { |
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325 return transaction_.GetTotalUncompressedSize(); |
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326 } |
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327 |
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328 bool IsProtectedPatient(int64_t internalId) |
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329 { |
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330 return transaction_.IsProtectedPatient(internalId); |
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331 } |
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332 |
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333 void ListAvailableAttachments(std::set<FileContentType>& target, |
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334 int64_t id) |
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335 { |
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336 transaction_.ListAvailableAttachments(target, id); |
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337 } |
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338 |
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339 bool LookupAttachment(FileInfo& attachment, |
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340 int64_t& revision, |
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341 int64_t id, |
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342 FileContentType contentType) |
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343 { |
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344 return transaction_.LookupAttachment(attachment, revision, id, contentType); |
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345 } |
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346 |
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347 bool LookupGlobalProperty(std::string& target, |
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348 GlobalProperty property, |
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349 bool shared) |
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350 { |
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351 return transaction_.LookupGlobalProperty(target, property, shared); |
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352 } |
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353 |
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354 bool LookupMetadata(std::string& target, |
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355 int64_t& revision, |
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356 int64_t id, |
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357 MetadataType type) |
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358 { |
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359 return transaction_.LookupMetadata(target, revision, id, type); |
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360 } |
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361 |
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362 bool LookupParent(int64_t& parentId, |
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363 int64_t resourceId) |
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364 { |
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365 return transaction_.LookupParent(parentId, resourceId); |
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366 } |
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367 |
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368 bool LookupResource(int64_t& id, |
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369 ResourceType& type, |
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370 const std::string& publicId) |
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371 { |
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372 return transaction_.LookupResource(id, type, publicId); |
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373 } |
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374 |
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375 bool LookupResourceAndParent(int64_t& id, |
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376 ResourceType& type, |
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377 std::string& parentPublicId, |
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378 const std::string& publicId) |
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379 { |
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380 return transaction_.LookupResourceAndParent(id, type, parentPublicId, publicId); |
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381 } |
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382 |
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383 void ListLabels(std::set<std::string>& target, |
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384 int64_t id) |
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385 { |
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386 transaction_.ListLabels(target, id); |
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387 } |
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388 |
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389 void ListAllLabels(std::set<std::string>& target) |
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390 { |
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391 transaction_.ListAllLabels(target); |
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392 } |
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393 |
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394 void ExecuteFind(FindResponse& response, |
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395 const FindRequest& request, |
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396 const IDatabaseWrapper::Capabilities& capabilities) |
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397 { |
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398 transaction_.ExecuteFind(response, request, capabilities); |
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399 } |
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400 |
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401 void ExecuteFind(std::list<std::string>& identifiers, |
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402 const FindRequest& request, |
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403 const IDatabaseWrapper::Capabilities& capabilities) |
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404 { |
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405 transaction_.ExecuteFind(identifiers, request, capabilities); |
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406 } |
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407 |
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408 void ExecuteExpand(FindResponse& response, |
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409 const FindRequest& request, |
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410 const std::string& identifier) |
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411 { |
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412 transaction_.ExecuteExpand(response, request, identifier); |
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413 } |
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414 }; |
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415 |
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416 |
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417 class ReadWriteTransaction : public ReadOnlyTransaction |
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418 { |
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419 public: |
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420 ReadWriteTransaction(IDatabaseWrapper::ITransaction& transaction, |
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421 ITransactionContext& context) : |
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422 ReadOnlyTransaction(transaction, context) |
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423 { |
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424 } |
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425 |
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426 void AddAttachment(int64_t id, |
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427 const FileInfo& attachment, |
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428 int64_t revision) |
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429 { |
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430 transaction_.AddAttachment(id, attachment, revision); |
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431 } |
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432 |
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433 void ClearChanges() |
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434 { |
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435 transaction_.ClearChanges(); |
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436 } |
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437 |
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438 void ClearExportedResources() |
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439 { |
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440 transaction_.ClearExportedResources(); |
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441 } |
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442 |
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443 void ClearMainDicomTags(int64_t id) |
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444 { |
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445 return transaction_.ClearMainDicomTags(id); |
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446 } |
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447 |
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448 bool CreateInstance(IDatabaseWrapper::CreateInstanceResult& result, /* out */ |
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449 int64_t& instanceId, /* out */ |
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450 const std::string& patient, |
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451 const std::string& study, |
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452 const std::string& series, |
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453 const std::string& instance) |
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454 { |
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455 return transaction_.CreateInstance(result, instanceId, patient, study, series, instance); |
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456 } |
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457 |
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458 void DeleteAttachment(int64_t id, |
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459 FileContentType attachment) |
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460 { |
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461 return transaction_.DeleteAttachment(id, attachment); |
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|
462 } |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
463 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
464 void DeleteMetadata(int64_t id, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
465 MetadataType type) |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
466 { |
4591
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moving all accesses to databases from IDatabaseWrapper to ITransaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
467 transaction_.DeleteMetadata(id, type); |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
468 } |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
469 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
470 void DeleteResource(int64_t id) |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
471 { |
4591
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moving all accesses to databases from IDatabaseWrapper to ITransaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
472 transaction_.DeleteResource(id); |
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taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
473 } |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
474 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
475 void LogChange(int64_t internalId, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
476 ChangeType changeType, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
477 ResourceType resourceType, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
478 const std::string& publicId); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
479 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
480 void LogExportedResource(const ExportedResource& resource) |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
481 { |
4591
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moving all accesses to databases from IDatabaseWrapper to ITransaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
482 transaction_.LogExportedResource(resource); |
4586
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taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
483 } |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
484 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
485 void SetGlobalProperty(GlobalProperty property, |
4607
f75c63aa9de0
differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4595
diff
changeset
|
486 bool shared, |
4586
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taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
487 const std::string& value) |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
488 { |
4607
f75c63aa9de0
differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4595
diff
changeset
|
489 transaction_.SetGlobalProperty(property, shared, value); |
4586
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taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
490 } |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
491 |
5455
176bc05f85f4
DB: new Capabilities class to manage future new methods from DB plugins + Added IncrementGlobalProperty
Alain Mazy <am@osimis.io>
parents:
5316
diff
changeset
|
492 int64_t IncrementGlobalProperty(GlobalProperty sequence, |
176bc05f85f4
DB: new Capabilities class to manage future new methods from DB plugins + Added IncrementGlobalProperty
Alain Mazy <am@osimis.io>
parents:
5316
diff
changeset
|
493 bool shared, |
176bc05f85f4
DB: new Capabilities class to manage future new methods from DB plugins + Added IncrementGlobalProperty
Alain Mazy <am@osimis.io>
parents:
5316
diff
changeset
|
494 int64_t increment) |
176bc05f85f4
DB: new Capabilities class to manage future new methods from DB plugins + Added IncrementGlobalProperty
Alain Mazy <am@osimis.io>
parents:
5316
diff
changeset
|
495 { |
176bc05f85f4
DB: new Capabilities class to manage future new methods from DB plugins + Added IncrementGlobalProperty
Alain Mazy <am@osimis.io>
parents:
5316
diff
changeset
|
496 return transaction_.IncrementGlobalProperty(sequence, shared, increment); |
176bc05f85f4
DB: new Capabilities class to manage future new methods from DB plugins + Added IncrementGlobalProperty
Alain Mazy <am@osimis.io>
parents:
5316
diff
changeset
|
497 } |
176bc05f85f4
DB: new Capabilities class to manage future new methods from DB plugins + Added IncrementGlobalProperty
Alain Mazy <am@osimis.io>
parents:
5316
diff
changeset
|
498 |
5466
dceed5e3d6a9
new DB plugin primitive: UpdateAndGetStatistics
Alain Mazy <am@osimis.io>
parents:
5455
diff
changeset
|
499 void UpdateAndGetStatistics(int64_t& patientsCount, |
dceed5e3d6a9
new DB plugin primitive: UpdateAndGetStatistics
Alain Mazy <am@osimis.io>
parents:
5455
diff
changeset
|
500 int64_t& studiesCount, |
dceed5e3d6a9
new DB plugin primitive: UpdateAndGetStatistics
Alain Mazy <am@osimis.io>
parents:
5455
diff
changeset
|
501 int64_t& seriesCount, |
dceed5e3d6a9
new DB plugin primitive: UpdateAndGetStatistics
Alain Mazy <am@osimis.io>
parents:
5455
diff
changeset
|
502 int64_t& instancesCount, |
dceed5e3d6a9
new DB plugin primitive: UpdateAndGetStatistics
Alain Mazy <am@osimis.io>
parents:
5455
diff
changeset
|
503 int64_t& compressedSize, |
dceed5e3d6a9
new DB plugin primitive: UpdateAndGetStatistics
Alain Mazy <am@osimis.io>
parents:
5455
diff
changeset
|
504 int64_t& uncompressedSize) |
dceed5e3d6a9
new DB plugin primitive: UpdateAndGetStatistics
Alain Mazy <am@osimis.io>
parents:
5455
diff
changeset
|
505 { |
dceed5e3d6a9
new DB plugin primitive: UpdateAndGetStatistics
Alain Mazy <am@osimis.io>
parents:
5455
diff
changeset
|
506 return transaction_.UpdateAndGetStatistics(patientsCount, studiesCount, seriesCount, instancesCount, compressedSize, uncompressedSize); |
dceed5e3d6a9
new DB plugin primitive: UpdateAndGetStatistics
Alain Mazy <am@osimis.io>
parents:
5455
diff
changeset
|
507 } |
dceed5e3d6a9
new DB plugin primitive: UpdateAndGetStatistics
Alain Mazy <am@osimis.io>
parents:
5455
diff
changeset
|
508 |
4586
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
509 void SetMetadata(int64_t id, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
510 MetadataType type, |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
511 const std::string& value, |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
512 int64_t revision) |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
513 { |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
514 return transaction_.SetMetadata(id, type, value, revision); |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
515 } |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
516 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
517 void SetProtectedPatient(int64_t internalId, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
518 bool isProtected) |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
519 { |
4591
ff8170d17d90
moving all accesses to databases from IDatabaseWrapper to ITransaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
520 transaction_.SetProtectedPatient(internalId, isProtected); |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
521 } |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
522 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
523 void SetResourcesContent(const ResourcesContent& content) |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
524 { |
4591
ff8170d17d90
moving all accesses to databases from IDatabaseWrapper to ITransaction
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4589
diff
changeset
|
525 transaction_.SetResourcesContent(content); |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
526 } |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
527 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
528 void Recycle(uint64_t maximumStorageSize, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
529 unsigned int maximumPatients, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
530 uint64_t addedInstanceSize, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
531 const std::string& newPatientId); |
5061
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
532 |
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
533 bool HasReachedMaxStorageSize(uint64_t maximumStorageSize, |
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
534 uint64_t addedInstanceSize); |
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
535 |
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
536 bool HasReachedMaxPatientCount(unsigned int maximumPatientCount, |
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
537 const std::string& patientId); |
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
538 |
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
539 bool IsRecyclingNeeded(uint64_t maximumStorageSize, |
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
540 unsigned int maximumPatients, |
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
541 uint64_t addedInstanceSize, |
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
542 const std::string& newPatientId); |
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
543 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
544 void AddLabel(int64_t id, |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
545 const std::string& label) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
546 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
547 transaction_.AddLabel(id, label); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
548 } |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
549 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
550 void RemoveLabel(int64_t id, |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
551 const std::string& label) |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
552 { |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
553 transaction_.RemoveLabel(id, label); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
|
554 } |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
555 }; |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
556 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
557 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
558 class IReadOnlyOperations : public boost::noncopyable |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
559 { |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
560 public: |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
561 virtual ~IReadOnlyOperations() |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
562 { |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
563 } |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
564 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
565 virtual void Apply(ReadOnlyTransaction& transaction) = 0; |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
566 }; |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
567 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
568 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
569 class IReadWriteOperations : public boost::noncopyable |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
570 { |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
571 public: |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
572 virtual ~IReadWriteOperations() |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
573 { |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
574 } |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
575 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
576 virtual void Apply(ReadWriteTransaction& transaction) = 0; |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
577 }; |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
578 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
579 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
580 private: |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
581 class Transaction; |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
582 |
4587
888868a5dc4e
ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4586
diff
changeset
|
583 IDatabaseWrapper& db_; |
4613
2684544ff03c
maximum number of database retries for writer collisions is now set by the plugins
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584 boost::shared_ptr<MainDicomTagsRegistry> mainDicomTagsRegistry_; // "shared_ptr" because of PImpl |
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585 |
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586 // Mutex to protect the configuration options |
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587 boost::shared_mutex mutex_; |
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588 std::unique_ptr<ITransactionContextFactory> factory_; |
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589 unsigned int maxRetries_; |
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590 |
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591 void ApplyInternal(IReadOnlyOperations* readOperations, |
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592 IReadWriteOperations* writeOperations); |
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593 |
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|
594 protected: |
5061
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595 void StandaloneRecycling(MaxStorageMode maximumStorageMode, |
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596 uint64_t maximumStorageSize, |
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597 unsigned int maximumPatientCount); |
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598 |
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599 public: |
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|
600 explicit StatelessDatabaseOperations(IDatabaseWrapper& database); |
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601 |
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602 void SetTransactionContextFactory(ITransactionContextFactory* factory /* takes ownership */); |
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603 |
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604 // Only used to handle "ErrorCode_DatabaseCannotSerialize" in the |
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605 // case of collision between multiple writers |
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|
606 void SetMaxDatabaseRetries(unsigned int maxRetries); |
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607 |
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608 // It is assumed that "GetDatabaseVersion()" can run out of a |
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609 // database transaction |
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610 unsigned int GetDatabaseVersion() |
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611 { |
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612 return db_.GetDatabaseVersion(); |
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613 } |
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614 |
5517
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refactoring IDatabaseWrapper::Capabilities
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diff
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|
615 const IDatabaseWrapper::Capabilities GetDatabaseCapabilities() const |
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changeset
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616 { |
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|
617 return db_.GetDatabaseCapabilities(); |
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|
618 } |
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|
619 |
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620 void FlushToDisk(); |
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621 |
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622 |
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623 void Apply(IReadOnlyOperations& operations); |
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624 |
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625 void Apply(IReadWriteOperations& operations); |
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|
626 |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
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627 bool ExpandResource(ExpandedResource& target, |
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628 const std::string& publicId, |
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Added "short", "simplify" and/or "full" options to control the format of DICOM tags wherever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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4694
diff
changeset
|
629 ResourceType level, |
4940
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tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
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parents:
4939
diff
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|
630 const std::set<DicomTag>& requestedTags, |
5222
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starting refactoring ExpandedResource
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changeset
|
631 ExpandResourceFlags expandFlags); |
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632 |
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633 void GetAllMetadata(std::map<MetadataType, std::string>& target, |
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634 const std::string& publicId, |
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635 ResourceType level); |
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636 |
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637 void GetAllUuids(std::list<std::string>& target, |
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638 ResourceType resourceType); |
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639 |
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|
640 void GetAllUuids(std::list<std::string>& target, |
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641 ResourceType resourceType, |
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642 size_t since, |
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|
643 uint32_t limit); |
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|
644 |
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|
645 void GetGlobalStatistics(/* out */ uint64_t& diskSize, |
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|
646 /* out */ uint64_t& uncompressedSize, |
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|
647 /* out */ uint64_t& countPatients, |
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648 /* out */ uint64_t& countStudies, |
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649 /* out */ uint64_t& countSeries, |
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|
650 /* out */ uint64_t& countInstances); |
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|
651 |
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diff
changeset
|
652 bool LookupAttachment(FileInfo& attachment, |
4627
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handling revisions of attachments
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4623
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|
653 int64_t& revision, |
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|
654 const std::string& instancePublicId, |
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|
655 FileContentType contentType); |
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|
656 |
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|
657 void GetChanges(Json::Value& target, |
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658 int64_t since, |
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|
659 uint32_t limit); |
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|
660 |
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|
661 void GetLastChange(Json::Value& target); |
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|
662 |
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|
663 void GetExportedResources(Json::Value& target, |
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664 int64_t since, |
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|
665 uint32_t limit); |
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666 |
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|
667 void GetLastExportedResource(Json::Value& target); |
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|
668 |
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|
669 bool IsProtectedPatient(const std::string& publicId); |
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670 |
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671 void GetChildren(std::list<std::string>& result, |
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672 const std::string& publicId); |
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673 |
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|
674 void GetChildInstances(std::list<std::string>& result, |
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|
675 const std::string& publicId); |
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676 |
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|
677 bool LookupMetadata(std::string& target, |
4623
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handling of revisions for metadata
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4613
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|
678 int64_t& revision, |
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|
679 const std::string& publicId, |
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680 ResourceType expectedType, |
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|
681 MetadataType type); |
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682 |
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|
683 void ListAvailableAttachments(std::set<FileContentType>& target, |
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|
684 const std::string& publicId, |
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changeset
|
685 ResourceType expectedType); |
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|
686 |
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|
687 bool LookupParent(std::string& target, |
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|
688 const std::string& publicId); |
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689 |
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|
690 void GetResourceStatistics(/* out */ ResourceType& type, |
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691 /* out */ uint64_t& diskSize, |
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|
692 /* out */ uint64_t& uncompressedSize, |
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|
693 /* out */ unsigned int& countStudies, |
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694 /* out */ unsigned int& countSeries, |
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|
695 /* out */ unsigned int& countInstances, |
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|
696 /* out */ uint64_t& dicomDiskSize, |
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697 /* out */ uint64_t& dicomUncompressedSize, |
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|
698 const std::string& publicId); |
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taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
699 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
700 void LookupIdentifierExact(std::vector<std::string>& result, |
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taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
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|
701 ResourceType level, |
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taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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|
702 const DicomTag& tag, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
703 const std::string& value); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
704 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
705 bool LookupGlobalProperty(std::string& value, |
4607
f75c63aa9de0
differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4595
diff
changeset
|
706 GlobalProperty property, |
f75c63aa9de0
differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4595
diff
changeset
|
707 bool shared); |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
708 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
709 std::string GetGlobalProperty(GlobalProperty property, |
4607
f75c63aa9de0
differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4595
diff
changeset
|
710 bool shared, |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
711 const std::string& defaultValue); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
712 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
713 bool GetMainDicomTags(DicomMap& result, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
714 const std::string& publicId, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
715 ResourceType expectedType, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
716 ResourceType levelOfInterest); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
717 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
718 // Only applicable at the instance level |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
719 bool GetAllMainDicomTags(DicomMap& result, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
720 const std::string& instancePublicId); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
721 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
722 bool LookupResourceType(ResourceType& type, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
723 const std::string& publicId); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
724 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
725 bool LookupParent(std::string& target, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
726 const std::string& publicId, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
727 ResourceType parentType); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
728 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
729 void ApplyLookupResources(std::vector<std::string>& resourcesId, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
730 std::vector<std::string>* instancesId, // Can be NULL if not needed |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
731 const DatabaseLookup& lookup, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
732 ResourceType queryLevel, |
5248
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5238
diff
changeset
|
733 const std::set<std::string>& labels, |
a7d95f951f8a
replaced "WithLabels" and "WithoutLabels", by "Labels" and "LabelsConstraint"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5238
diff
changeset
|
734 LabelsConstraint labelsConstraint, |
5220
df39c7583a49
preparing virtual methods for labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5185
diff
changeset
|
735 uint32_t limit); |
4586
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
736 |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4640
diff
changeset
|
737 bool DeleteResource(Json::Value& remainingAncestor /* out */, |
4586
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taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
738 const std::string& uuid, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
739 ResourceType expectedType); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
740 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
741 void LogExportedResource(const std::string& publicId, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
742 const std::string& remoteModality); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
743 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
744 void SetProtectedPatient(const std::string& publicId, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
745 bool isProtected); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
746 |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
747 void SetMetadata(int64_t& newRevision /*out*/, |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
748 const std::string& publicId, |
4586
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
749 MetadataType type, |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
750 const std::string& value, |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
751 bool hasOldRevision, |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
752 int64_t oldRevision, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
753 const std::string& oldMD5); |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
754 |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
755 // Same as "SetMetadata()", but doesn't care about revisions |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
756 void OverwriteMetadata(const std::string& publicId, |
95ffe3b6ef7c
handling of revisions for metadata
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parents:
4613
diff
changeset
|
757 MetadataType type, |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
758 const std::string& value); |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
759 |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
760 bool DeleteMetadata(const std::string& publicId, |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
761 MetadataType type, |
95ffe3b6ef7c
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4613
diff
changeset
|
762 bool hasRevision, |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
763 int64_t revision, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
764 const std::string& md5); |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
765 |
4607
f75c63aa9de0
differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4595
diff
changeset
|
766 uint64_t IncrementGlobalSequence(GlobalProperty sequence, |
f75c63aa9de0
differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4595
diff
changeset
|
767 bool shared); |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
768 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
769 void DeleteChanges(); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
770 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
771 void DeleteExportedResources(); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
772 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
773 void SetGlobalProperty(GlobalProperty property, |
4607
f75c63aa9de0
differentiating between shared and private global properties
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4595
diff
changeset
|
774 bool shared, |
4586
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taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
775 const std::string& value); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
776 |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
777 bool DeleteAttachment(const std::string& publicId, |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
778 FileContentType type, |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
779 bool hasRevision, |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
780 int64_t revision, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
|
781 const std::string& md5); |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
782 |
4587
888868a5dc4e
ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4586
diff
changeset
|
783 void LogChange(int64_t internalId, |
888868a5dc4e
ServerIndex now uses StatelessDatabaseOperations
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4586
diff
changeset
|
784 ChangeType changeType, |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
785 const std::string& publicId, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
786 ResourceType level); |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
787 |
5558
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5522
diff
changeset
|
788 void ReconstructInstance(const ParsedDicomFile& dicom, |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5522
diff
changeset
|
789 bool limitToThisLevelDicomTags, |
c1ed59a5bdc2
new LimitToThisLevelMainDicomTags reconstruct mode + * Housekeeper plugin: Added an option LimitMainDicomTagsReconstructLevel
Alain Mazy <am@orthanc.team>
parents:
5522
diff
changeset
|
790 ResourceType limitToLevel_); |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
791 |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
792 StoreStatus Store(std::map<MetadataType, std::string>& instanceMetadata, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
793 const DicomMap& dicomSummary, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
794 const Attachments& attachments, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
795 const MetadataMap& metadata, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
796 const DicomInstanceOrigin& origin, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
797 bool overwrite, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
798 bool hasTransferSyntax, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
799 DicomTransferSyntax transferSyntax, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
800 bool hasPixelDataOffset, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
801 uint64_t pixelDataOffset, |
5316
03501a258d9e
added instance metadata "PixelDataVR"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5277
diff
changeset
|
802 ValueRepresentation pixelDataVR, |
5061
e95fadefeb72
new MaximumStorageMode configuration
Alain Mazy <am@osimis.io>
parents:
5044
diff
changeset
|
803 MaxStorageMode maximumStorageMode, |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
804 uint64_t maximumStorageSize, |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4940
diff
changeset
|
805 unsigned int maximumPatients, |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4940
diff
changeset
|
806 bool isReconstruct); |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
807 |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
808 StoreStatus AddAttachment(int64_t& newRevision /*out*/, |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
809 const FileInfo& attachment, |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
810 const std::string& publicId, |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
|
811 uint64_t maximumStorageSize, |
4627
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
|
812 unsigned int maximumPatients, |
f7d5372b59b3
handling revisions of attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4623
diff
changeset
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813 bool hasOldRevision, |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
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814 int64_t oldRevision, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4627
diff
changeset
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815 const std::string& oldMd5); |
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
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816 |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
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817 void ListLabels(std::set<std::string>& target, |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
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818 const std::string& publicId, |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
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819 ResourceType level); |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
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820 |
5249
f22c8fac764b
added "/tools/labels" to list all the labels that are associated with any resource
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5248
diff
changeset
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821 void ListAllLabels(std::set<std::string>& target); |
f22c8fac764b
added "/tools/labels" to list all the labels that are associated with any resource
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5248
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changeset
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822 |
5221
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
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823 void ModifyLabel(const std::string& publicId, |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
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824 ResourceType level, |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
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825 const std::string& label, |
d0f7c742d397
started implementation of labels
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5220
diff
changeset
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826 LabelOperation operation); |
5238
367e8af46cfd
added "HasLabels" in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5237
diff
changeset
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827 |
5495
4b3f5986eca1
Added a 'KeepLabels' option in /modify routes (default = false)
Alain Mazy <am@osimis.io>
parents:
5485
diff
changeset
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828 void AddLabels(const std::string& publicId, |
4b3f5986eca1
Added a 'KeepLabels' option in /modify routes (default = false)
Alain Mazy <am@osimis.io>
parents:
5485
diff
changeset
|
829 ResourceType level, |
4b3f5986eca1
Added a 'KeepLabels' option in /modify routes (default = false)
Alain Mazy <am@osimis.io>
parents:
5485
diff
changeset
|
830 const std::set<std::string>& labels); |
4b3f5986eca1
Added a 'KeepLabels' option in /modify routes (default = false)
Alain Mazy <am@osimis.io>
parents:
5485
diff
changeset
|
831 |
5238
367e8af46cfd
added "HasLabels" in /system
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5237
diff
changeset
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832 bool HasLabelsSupport(); |
5554
12d8a1a266e9
introduction of FindRequest and FindResponse
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5522
diff
changeset
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833 |
12d8a1a266e9
introduction of FindRequest and FindResponse
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5522
diff
changeset
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834 void ExecuteFind(FindResponse& response, |
12d8a1a266e9
introduction of FindRequest and FindResponse
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
5522
diff
changeset
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835 const FindRequest& request); |
4586
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
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836 }; |
1d96fe7e054e
taking StatelessDatabaseOperations out of ServerIndex
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff
changeset
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837 } |