Mercurial > hg > orthanc

annotate OrthancServer/Sources/DicomInstanceToStore.cpp @ 4831:7053502fbf97

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
added copyright UCLouvain
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 25 Nov 2021 19:01:11 +0100
parents a3c6678aa7b1
children 2e71a08eea15 43e613a7756b
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
1003
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2 * Orthanc - A Lightweight, RESTful DICOM Store
1900
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1854
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
1288
6e7e5ed91c2d upgrade to year 2015
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1005
diff changeset
4 * Department, University Hospital of Liege, Belgium
4437
d9473bd5ed43 upgrade to year 2021
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4385
diff changeset
5 * Copyright (C) 2017-2021 Osimis S.A., Belgium
4831
7053502fbf97 added copyright UCLouvain
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4519
diff changeset
6 * Copyright (C) 2021-2021 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
1003
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 *
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
8 * This program is free software: you can redistribute it and/or
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 * modify it under the terms of the GNU General Public License as
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 * published by the Free Software Foundation, either version 3 of the
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
11 * License, or (at your option) any later version.
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
12 *
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 * In addition, as a special exception, the copyright holders of this
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
14 * program give permission to link the code of its release with the
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
15 * OpenSSL project's "OpenSSL" library (or with modified versions of it
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
16 * that use the same license as the "OpenSSL" library), and distribute
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
17 * the linked executables. You must obey the GNU General Public License
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
18 * in all respects for all of the code used other than "OpenSSL". If you
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
19 * modify file(s) with this exception, you may extend this exception to
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
20 * your version of the file(s), but you are not obligated to do so. If
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21 * you do not wish to do so, delete this exception statement from your
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22 * version. If you delete this exception statement from all source files
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23 * in the program, then also delete it here.
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24 *
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25 * This program is distributed in the hope that it will be useful, but
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
26 * WITHOUT ANY WARRANTY; without even the implied warranty of
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
27 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 * General Public License for more details.
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29 *
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
30 * You should have received a copy of the GNU General Public License
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31 * along with this program. If not, see <http://www.gnu.org/licenses/>.
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32 **/
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
33
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34
1624
0a2ad4a6858f fix missing precompiled headers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1573
diff changeset
35 #include "PrecompiledHeadersServer.h"
1003
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36 #include "DicomInstanceToStore.h"
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
37
4140
0ddc5297a8ab centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4137
diff changeset
38 #include "OrthancConfiguration.h"
0ddc5297a8ab centralization of default parameters for JSON/DicomMap conversions from DCMTK
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4137
diff changeset
39
4045
05b8fd21089c fix path
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
40 #include "../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h"
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
41 #include "../../OrthancFramework/Sources/DicomParsing/Internals/DicomFrameIndex.h"
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
42 #include "../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h"
4045
05b8fd21089c fix path
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
43 #include "../../OrthancFramework/Sources/DicomParsing/ParsedDicomFile.h"
05b8fd21089c fix path
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
44 #include "../../OrthancFramework/Sources/Logging.h"
05b8fd21089c fix path
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
45 #include "../../OrthancFramework/Sources/OrthancException.h"
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1003
diff changeset
46
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1003
diff changeset
47 #include <dcmtk/dcmdata/dcfilefo.h>
2189
c4b3259c8bce New metadata automatically computed at the instance level: "TransferSyntax"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2131
diff changeset
48 #include <dcmtk/dcmdata/dcdeftag.h>
1004
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1003
diff changeset
49
a226e0959d8b DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1003
diff changeset
50
1003
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
51 namespace Orthanc
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
52 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
53 class DicomInstanceToStore::FromBuffer : public DicomInstanceToStore
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
54 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
55 private:
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
56 const void* buffer_;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
57 size_t size_;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
58 std::unique_ptr<ParsedDicomFile> parsed_;
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
59
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2894
diff changeset
60 public:
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
61 FromBuffer(const void* buffer,
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
62 size_t size) :
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
63 buffer_(buffer),
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
64 size_(size)
3841
be7df7fe3d80 avoid one memcpy of the DICOM buffer on "POST /instances"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
65 {
be7df7fe3d80 avoid one memcpy of the DICOM buffer on "POST /instances"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
66 }
be7df7fe3d80 avoid one memcpy of the DICOM buffer on "POST /instances"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
67
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
68 virtual ParsedDicomFile& GetParsedDicomFile() const ORTHANC_OVERRIDE
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
69 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
70 if (parsed_.get() == NULL)
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
71 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
72 const_cast<FromBuffer&>(*this).parsed_.reset(new ParsedDicomFile(buffer_, size_));
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
73 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
74
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
75 return *parsed_;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
76 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
77
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
78 virtual const void* GetBufferData() const ORTHANC_OVERRIDE
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
79 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
80 return buffer_;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
81 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
82
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
83 virtual size_t GetBufferSize() const ORTHANC_OVERRIDE
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
84 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
85 return size_;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
86 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
87 };
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
88
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
89
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
90 class DicomInstanceToStore::FromParsedDicomFile : public DicomInstanceToStore
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
91 {
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2894
diff changeset
92 private:
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
93 ParsedDicomFile& parsed_;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
94 std::unique_ptr<std::string> buffer_;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
95
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
96 void SerializeToBuffer()
3845
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
97 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
98 if (buffer_.get() == NULL)
3845
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
99 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
100 buffer_.reset(new std::string);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
101 parsed_.SaveToMemoryBuffer(*buffer_);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
102 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
103 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
104
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
105 public:
4519
a3c6678aa7b1 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
106 explicit FromParsedDicomFile(ParsedDicomFile& parsed) :
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
107 parsed_(parsed)
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
108 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
109 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
110
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
111 virtual ParsedDicomFile& GetParsedDicomFile() const ORTHANC_OVERRIDE
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
112 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
113 return parsed_;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
114 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
115
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
116 virtual const void* GetBufferData() const ORTHANC_OVERRIDE
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
117 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
118 const_cast<FromParsedDicomFile&>(*this).SerializeToBuffer();
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
119
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
120 assert(buffer_.get() != NULL);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
121 return (buffer_->empty() ? NULL : buffer_->c_str());
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
122 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
123
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
124 virtual size_t GetBufferSize() const ORTHANC_OVERRIDE
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
125 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
126 const_cast<FromParsedDicomFile&>(*this).SerializeToBuffer();
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
127
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
128 assert(buffer_.get() != NULL);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
129 return buffer_->size();
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
130 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
131 };
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
132
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
133
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
134 class DicomInstanceToStore::FromDcmDataset : public DicomInstanceToStore
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
135 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
136 private:
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
137 DcmDataset& dataset_;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
138 std::unique_ptr<std::string> buffer_;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
139 std::unique_ptr<ParsedDicomFile> parsed_;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
140
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
141 void SerializeToBuffer()
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
142 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
143 if (buffer_.get() == NULL)
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
144 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
145 buffer_.reset(new std::string);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
146
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
147 if (!FromDcmtkBridge::SaveToMemoryBuffer(*buffer_, dataset_))
3845
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
148 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
149 throw OrthancException(ErrorCode_InternalError, "Cannot write DICOM file to memory");
3845
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
150 }
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
151 }
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
152 }
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
153
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
154 public:
4519
a3c6678aa7b1 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
155 explicit FromDcmDataset(DcmDataset& dataset) :
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
156 dataset_(dataset)
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
157 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
158 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
159
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
160 virtual ParsedDicomFile& GetParsedDicomFile() const ORTHANC_OVERRIDE
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
161 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
162 if (parsed_.get() == NULL)
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
163 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
164 // This operation is costly, as it creates a clone of the
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
165 // dataset. This explains why the default implementations
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
166 // are overridden below to use "dataset_" as much as possible
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
167 const_cast<FromDcmDataset&>(*this).parsed_.reset(new ParsedDicomFile(dataset_));
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
168 }
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
169
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
170 return *parsed_;
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
171 }
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
172
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
173 virtual const void* GetBufferData() const ORTHANC_OVERRIDE
3841
be7df7fe3d80 avoid one memcpy of the DICOM buffer on "POST /instances"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
174 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
175 const_cast<FromDcmDataset&>(*this).SerializeToBuffer();
3841
be7df7fe3d80 avoid one memcpy of the DICOM buffer on "POST /instances"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3712
diff changeset
176
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
177 assert(buffer_.get() != NULL);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
178 return (buffer_->empty() ? NULL : buffer_->c_str());
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
179 }
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
180
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
181 virtual size_t GetBufferSize() const ORTHANC_OVERRIDE
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
182 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
183 const_cast<FromDcmDataset&>(*this).SerializeToBuffer();
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
184
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
185 assert(buffer_.get() != NULL);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
186 return buffer_->size();
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
187 }
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
188
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
189 virtual bool HasPixelData() const ORTHANC_OVERRIDE
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
190 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
191 DcmTag key(DICOM_TAG_PIXEL_DATA.GetGroup(),
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
192 DICOM_TAG_PIXEL_DATA.GetElement());
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
193 return dataset_.tagExists(key);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
194 }
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
195
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
196 virtual void GetSummary(DicomMap& summary) const ORTHANC_OVERRIDE
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
197 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
198 OrthancConfiguration::DefaultExtractDicomSummary(summary, dataset_);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
199 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
200
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
201 virtual void GetDicomAsJson(Json::Value& dicomAsJson) const ORTHANC_OVERRIDE
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
202 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
203 OrthancConfiguration::DefaultDicomDatasetToJson(dicomAsJson, dataset_);
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
204 }
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
205
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
206 virtual void DatasetToJson(Json::Value& target,
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
207 DicomToJsonFormat format,
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
208 DicomToJsonFlags flags,
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
209 unsigned int maxStringLength) const ORTHANC_OVERRIDE
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
210 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
211 std::set<DicomTag> ignoreTagLength;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
212 FromDcmtkBridge::ExtractDicomAsJson(
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
213 target, dataset_, format, flags, maxStringLength, ignoreTagLength);
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
214 }
3845
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
215
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
216 virtual unsigned int GetFramesCount() const ORTHANC_OVERRIDE
3845
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
217 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
218 return DicomFrameIndex::GetFramesCount(dataset_);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
219 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
220
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
221 virtual ImageAccessor* DecodeFrame(unsigned int frame) const ORTHANC_OVERRIDE
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
222 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
223 return DicomImageDecoder::Decode(dataset_, frame);
3845
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
224 }
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
225 };
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
226
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
227
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
228 DicomInstanceToStore* DicomInstanceToStore::CreateFromBuffer(const void* buffer,
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
229 size_t size)
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
230 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
231 return new FromBuffer(buffer, size);
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
232 }
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
233
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
234
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
235 DicomInstanceToStore* DicomInstanceToStore::CreateFromBuffer(const std::string& buffer)
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
236 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
237 return new FromBuffer(buffer.empty() ? NULL : buffer.c_str(), buffer.size());
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
238 }
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
239
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
240
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
241 DicomInstanceToStore* DicomInstanceToStore::CreateFromParsedDicomFile(ParsedDicomFile& dicom)
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
242 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
243 return new FromParsedDicomFile(dicom);
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
244 }
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
245
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
246
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
247 DicomInstanceToStore* DicomInstanceToStore::CreateFromDcmDataset(DcmDataset& dataset)
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
248 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
249 return new FromDcmDataset(dataset);
2894
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
250 }
a27b0e9a3fd9 refactoring DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2640
diff changeset
251
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
252
4507
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
253 bool DicomInstanceToStore::LookupTransferSyntax(DicomTransferSyntax& result) const
2189
c4b3259c8bce New metadata automatically computed at the instance level: "TransferSyntax"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2131
diff changeset
254 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
255 DicomMap header;
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
256 if (DicomMap::ParseDicomMetaInformation(header, GetBufferData(), GetBufferSize()))
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
257 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
258 const DicomValue* value = header.TestAndGetValue(DICOM_TAG_TRANSFER_SYNTAX_UID);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
259 if (value != NULL &&
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
260 !value->IsBinary() &&
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
261 !value->IsNull())
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
262 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
263 return ::Orthanc::LookupTransferSyntax(result, Toolbox::StripSpaces(value->GetContent()));
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
264 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
265 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
266 else
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
267 {
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
268 // This is a DICOM file without a proper meta-header. Fallback
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
269 // to DCMTK, which will fully parse the dataset to retrieve
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
270 // the transfer syntax. Added in Orthanc 1.8.2.
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
271 return GetParsedDicomFile().LookupTransferSyntax(result);
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
272 }
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
273
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
274 return false;
2189
c4b3259c8bce New metadata automatically computed at the instance level: "TransferSyntax"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2131
diff changeset
275 }
2898
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2894
diff changeset
276
e5e3253a1164 DicomInstanceToStore::GetHasher()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2894
diff changeset
277
3845
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
278 bool DicomInstanceToStore::HasPixelData() const
281045a1e6db new "info" field in "ReceivedInstanceFilter()" callback
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3841
diff changeset
279 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
280 return GetParsedDicomFile().HasTag(DICOM_TAG_PIXEL_DATA);
3912
7610af1532c3 prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3847
diff changeset
281 }
7610af1532c3 prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3847
diff changeset
282
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
283
4507
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
284 void DicomInstanceToStore::GetSummary(DicomMap& summary) const
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
285 {
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
286 OrthancConfiguration::DefaultExtractDicomSummary(summary, GetParsedDicomFile());
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
287 }
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
288
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
289
4507
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
290 void DicomInstanceToStore::GetDicomAsJson(Json::Value& dicomAsJson) const
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
291 {
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
292 OrthancConfiguration::DefaultDicomDatasetToJson(dicomAsJson, GetParsedDicomFile());
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
293 }
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
294
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
295
4507
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
296 void DicomInstanceToStore::DatasetToJson(Json::Value& target,
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
297 DicomToJsonFormat format,
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
298 DicomToJsonFlags flags,
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
299 unsigned int maxStringLength) const
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
300 {
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
301 return GetParsedDicomFile().DatasetToJson(target, format, flags, maxStringLength);
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
302 }
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
303
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
304
4507
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
305 unsigned int DicomInstanceToStore::GetFramesCount() const
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
306 {
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
307 return GetParsedDicomFile().GetFramesCount();
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
308 }
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
309
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4507
diff changeset
310
4507
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
311 ImageAccessor* DicomInstanceToStore::DecodeFrame(unsigned int frame) const
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
312 {
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
313 return GetParsedDicomFile().DecodeFrame(frame);
b4c58795f3a8 widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4506
diff changeset
314 }
1003
1d35281d967c DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
315 }