Mercurial > hg > orthanc
annotate UnitTestsSources/FromDcmtkTests.cpp @ 2166:700dbb3baac9
refactoring in ServeFolders
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Tue, 22 Nov 2016 13:38:20 +0100 |
parents | 5a8840920121 |
children | 9b373b7d6713 |
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1 /** |
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2 * Orthanc - A Lightweight, RESTful DICOM Store |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * |
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6 * This program is free software: you can redistribute it and/or |
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7 * modify it under the terms of the GNU General Public License as |
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8 * published by the Free Software Foundation, either version 3 of the |
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9 * License, or (at your option) any later version. |
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10 * |
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11 * In addition, as a special exception, the copyright holders of this |
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12 * program give permission to link the code of its release with the |
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it |
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14 * that use the same license as the "OpenSSL" library), and distribute |
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15 * the linked executables. You must obey the GNU General Public License |
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16 * in all respects for all of the code used other than "OpenSSL". If you |
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17 * modify file(s) with this exception, you may extend this exception to |
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18 * your version of the file(s), but you are not obligated to do so. If |
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19 * you do not wish to do so, delete this exception statement from your |
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20 * version. If you delete this exception statement from all source files |
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21 * in the program, then also delete it here. |
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22 * |
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23 * This program is distributed in the hope that it will be useful, but |
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of |
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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26 * General Public License for more details. |
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27 * |
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28 * You should have received a copy of the GNU General Public License |
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
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30 **/ |
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31 |
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32 |
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33 #include "PrecompiledHeadersUnitTests.h" |
782 | 34 #include "gtest/gtest.h" |
35 | |
36 #include "../OrthancServer/FromDcmtkBridge.h" | |
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37 #include "../OrthancServer/ToDcmtkBridge.h" |
782 | 38 #include "../OrthancServer/OrthancInitialization.h" |
786 | 39 #include "../OrthancServer/DicomModification.h" |
1692 | 40 #include "../OrthancServer/ServerToolbox.h" |
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41 #include "../Core/OrthancException.h" |
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42 #include "../Core/Images/ImageBuffer.h" |
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43 #include "../Core/Images/PngReader.h" |
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44 #include "../Core/Images/PngWriter.h" |
1937 | 45 #include "../Core/Images/Image.h" |
1940 | 46 #include "../Core/Images/ImageProcessing.h" |
47 #include "../Core/Endianness.h" | |
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48 #include "../Resources/EncodingTests.h" |
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49 #include "../OrthancServer/DicomProtocol/DicomFindAnswers.h" |
1940 | 50 #include "../OrthancServer/Internals/DicomImageDecoder.h" |
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51 #include "../Plugins/Engine/PluginsEnumerations.h" |
782 | 52 |
1690 | 53 #include <dcmtk/dcmdata/dcelem.h> |
54 | |
782 | 55 using namespace Orthanc; |
56 | |
57 TEST(DicomFormat, Tag) | |
58 { | |
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59 ASSERT_EQ("PatientName", FromDcmtkBridge::GetTagName(DicomTag(0x0010, 0x0010), "")); |
782 | 60 |
61 DicomTag t = FromDcmtkBridge::ParseTag("SeriesDescription"); | |
62 ASSERT_EQ(0x0008, t.GetGroup()); | |
63 ASSERT_EQ(0x103E, t.GetElement()); | |
64 | |
65 t = FromDcmtkBridge::ParseTag("0020-e040"); | |
66 ASSERT_EQ(0x0020, t.GetGroup()); | |
67 ASSERT_EQ(0xe040, t.GetElement()); | |
68 | |
69 // Test ==() and !=() operators | |
70 ASSERT_TRUE(DICOM_TAG_PATIENT_ID == DicomTag(0x0010, 0x0020)); | |
71 ASSERT_FALSE(DICOM_TAG_PATIENT_ID != DicomTag(0x0010, 0x0020)); | |
72 } | |
73 | |
74 | |
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75 TEST(DicomModification, Basic) |
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76 { |
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77 DicomModification m; |
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78 m.SetupAnonymization(); |
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79 //m.SetLevel(DicomRootLevel_Study); |
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80 //m.ReplacePlainString(DICOM_TAG_PATIENT_ID, "coucou"); |
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81 //m.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "coucou"); |
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82 |
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83 ParsedDicomFile o(true); |
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84 o.SaveToFile("UnitTestsResults/anon.dcm"); |
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85 |
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86 for (int i = 0; i < 10; i++) |
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87 { |
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88 char b[1024]; |
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89 sprintf(b, "UnitTestsResults/anon%06d.dcm", i); |
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90 std::auto_ptr<ParsedDicomFile> f(o.Clone()); |
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91 if (i > 4) |
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92 o.ReplacePlainString(DICOM_TAG_SERIES_INSTANCE_UID, "coucou"); |
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93 m.Apply(*f); |
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94 f->SaveToFile(b); |
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95 } |
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96 } |
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97 |
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98 |
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99 TEST(DicomModification, Anonymization) |
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100 { |
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101 ASSERT_EQ(DICOM_TAG_PATIENT_NAME, FromDcmtkBridge::ParseTag("PatientName")); |
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102 |
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103 const DicomTag privateTag(0x0045, 0x0010); |
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104 const DicomTag privateTag2(FromDcmtkBridge::ParseTag("0031-1020")); |
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105 ASSERT_TRUE(privateTag.IsPrivate()); |
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106 ASSERT_TRUE(privateTag2.IsPrivate()); |
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107 ASSERT_EQ(0x0031, privateTag2.GetGroup()); |
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108 ASSERT_EQ(0x1020, privateTag2.GetElement()); |
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109 |
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110 std::string s; |
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111 ParsedDicomFile o(true); |
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112 o.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "coucou"); |
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113 ASSERT_FALSE(o.GetTagValue(s, privateTag)); |
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114 o.Insert(privateTag, "private tag", false); |
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115 ASSERT_TRUE(o.GetTagValue(s, privateTag)); |
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116 ASSERT_STREQ("private tag", s.c_str()); |
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117 |
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118 ASSERT_FALSE(o.GetTagValue(s, privateTag2)); |
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119 ASSERT_THROW(o.Replace(privateTag2, std::string("hello"), false, DicomReplaceMode_ThrowIfAbsent), OrthancException); |
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120 ASSERT_FALSE(o.GetTagValue(s, privateTag2)); |
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121 o.Replace(privateTag2, std::string("hello"), false, DicomReplaceMode_IgnoreIfAbsent); |
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122 ASSERT_FALSE(o.GetTagValue(s, privateTag2)); |
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123 o.Replace(privateTag2, std::string("hello"), false, DicomReplaceMode_InsertIfAbsent); |
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124 ASSERT_TRUE(o.GetTagValue(s, privateTag2)); |
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125 ASSERT_STREQ("hello", s.c_str()); |
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126 o.ReplacePlainString(privateTag2, "hello world"); |
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127 ASSERT_TRUE(o.GetTagValue(s, privateTag2)); |
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128 ASSERT_STREQ("hello world", s.c_str()); |
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129 |
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130 ASSERT_TRUE(o.GetTagValue(s, DICOM_TAG_PATIENT_NAME)); |
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131 ASSERT_FALSE(Toolbox::IsUuid(s)); |
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132 |
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133 DicomModification m; |
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134 m.SetupAnonymization(); |
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135 m.Keep(privateTag); |
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136 |
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137 m.Apply(o); |
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138 |
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139 ASSERT_TRUE(o.GetTagValue(s, DICOM_TAG_PATIENT_NAME)); |
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140 ASSERT_TRUE(Toolbox::IsUuid(s)); |
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141 ASSERT_TRUE(o.GetTagValue(s, privateTag)); |
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142 ASSERT_STREQ("private tag", s.c_str()); |
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143 |
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144 m.SetupAnonymization(); |
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145 m.Apply(o); |
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146 ASSERT_FALSE(o.GetTagValue(s, privateTag)); |
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147 } |
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148 |
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149 |
802 | 150 #include <dcmtk/dcmdata/dcuid.h> |
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151 |
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152 TEST(DicomModification, Png) |
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153 { |
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154 // Red dot in http://en.wikipedia.org/wiki/Data_URI_scheme (RGBA image) |
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155 std::string s = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg=="; |
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156 |
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157 std::string m, cc; |
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158 ASSERT_TRUE(Toolbox::DecodeDataUriScheme(m, cc, s)); |
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159 |
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160 ASSERT_EQ("image/png", m); |
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161 |
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162 PngReader reader; |
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163 reader.ReadFromMemory(cc); |
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164 |
1492 | 165 ASSERT_EQ(5u, reader.GetHeight()); |
166 ASSERT_EQ(5u, reader.GetWidth()); | |
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167 ASSERT_EQ(PixelFormat_RGBA32, reader.GetFormat()); |
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168 |
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169 ParsedDicomFile o(true); |
1562 | 170 o.EmbedContent(s); |
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171 o.SaveToFile("UnitTestsResults/png1.dcm"); |
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172 |
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173 // Red dot, without alpha channel |
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174 s = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAIAAAACDbGyAAAACXBIWXMAAAsTAAALEwEAmpwYAAAAB3RJTUUH3gUGDTcIn2+8BgAAACJJREFUCNdj/P//PwMjIwME/P/P+J8BBTAxEOL/R9Lx/z8AynoKAXOeiV8AAAAASUVORK5CYII="; |
1562 | 175 o.EmbedContent(s); |
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176 o.SaveToFile("UnitTestsResults/png2.dcm"); |
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177 |
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178 // Check box in Graylevel8 |
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179 s = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAAAAAA6mKC9AAAACXBIWXMAAAsTAAALEwEAmpwYAAAAB3RJTUUH3gUGDDcB53FulQAAAElJREFUGNNtj0sSAEEEQ1+U+185s1CtmRkblQ9CZldsKHJDk6DLGLJa6chjh0ooQmpjXMM86zPwydGEj6Ed/UGykkEM8X+p3u8/8LcOJIWLGeMAAAAASUVORK5CYII="; |
1562 | 180 o.EmbedContent(s); |
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181 //o.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, UID_DigitalXRayImageStorageForProcessing); |
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182 o.SaveToFile("UnitTestsResults/png3.dcm"); |
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183 |
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184 |
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185 { |
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186 // Gradient in Graylevel16 |
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187 |
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188 ImageBuffer img; |
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189 img.SetWidth(256); |
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190 img.SetHeight(256); |
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191 img.SetFormat(PixelFormat_Grayscale16); |
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192 |
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193 uint16_t v = 0; |
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194 for (unsigned int y = 0; y < img.GetHeight(); y++) |
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195 { |
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196 uint16_t *p = reinterpret_cast<uint16_t*>(img.GetAccessor().GetRow(y)); |
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197 for (unsigned int x = 0; x < img.GetWidth(); x++, p++, v++) |
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198 { |
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199 *p = v; |
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200 } |
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201 } |
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202 |
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203 o.EmbedImage(img.GetAccessor()); |
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204 o.SaveToFile("UnitTestsResults/png4.dcm"); |
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205 } |
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206 } |
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207 |
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208 |
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209 TEST(FromDcmtkBridge, Encodings1) |
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210 { |
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211 for (unsigned int i = 0; i < testEncodingsCount; i++) |
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212 { |
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213 std::string source(testEncodingsEncoded[i]); |
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214 std::string expected(testEncodingsExpected[i]); |
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215 std::string s = Toolbox::ConvertToUtf8(source, testEncodings[i]); |
1695 | 216 //std::cout << EnumerationToString(testEncodings[i]) << std::endl; |
1089 | 217 EXPECT_EQ(expected, s); |
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218 } |
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219 } |
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220 |
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221 |
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222 TEST(FromDcmtkBridge, Enumerations) |
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223 { |
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224 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#sect_C.12.1.1.2 |
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225 Encoding e; |
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226 |
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227 ASSERT_FALSE(GetDicomEncoding(e, "")); |
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228 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 6")); ASSERT_EQ(Encoding_Utf8, e); |
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229 |
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230 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-2 |
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231 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 100")); ASSERT_EQ(Encoding_Latin1, e); |
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232 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 101")); ASSERT_EQ(Encoding_Latin2, e); |
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233 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 109")); ASSERT_EQ(Encoding_Latin3, e); |
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234 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 110")); ASSERT_EQ(Encoding_Latin4, e); |
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235 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 144")); ASSERT_EQ(Encoding_Cyrillic, e); |
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236 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 127")); ASSERT_EQ(Encoding_Arabic, e); |
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237 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 126")); ASSERT_EQ(Encoding_Greek, e); |
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238 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 138")); ASSERT_EQ(Encoding_Hebrew, e); |
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239 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 148")); ASSERT_EQ(Encoding_Latin5, e); |
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240 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 13")); ASSERT_EQ(Encoding_Japanese, e); |
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241 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 166")); ASSERT_EQ(Encoding_Thai, e); |
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242 |
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243 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-3 |
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244 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 6")); ASSERT_EQ(Encoding_Utf8, e); |
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245 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 100")); ASSERT_EQ(Encoding_Latin1, e); |
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246 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 101")); ASSERT_EQ(Encoding_Latin2, e); |
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247 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 109")); ASSERT_EQ(Encoding_Latin3, e); |
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248 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 110")); ASSERT_EQ(Encoding_Latin4, e); |
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249 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 144")); ASSERT_EQ(Encoding_Cyrillic, e); |
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250 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 127")); ASSERT_EQ(Encoding_Arabic, e); |
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251 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 126")); ASSERT_EQ(Encoding_Greek, e); |
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252 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 138")); ASSERT_EQ(Encoding_Hebrew, e); |
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253 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 148")); ASSERT_EQ(Encoding_Latin5, e); |
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254 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 13")); ASSERT_EQ(Encoding_Japanese, e); |
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255 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 166")); ASSERT_EQ(Encoding_Thai, e); |
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256 |
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257 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-4 |
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258 ASSERT_FALSE(GetDicomEncoding(e, "ISO 2022 IR 87")); //ASSERT_EQ(Encoding_JapaneseKanji, e); |
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259 ASSERT_FALSE(GetDicomEncoding(e, "ISO 2022 IR 159")); //ASSERT_EQ(Encoding_JapaneseKanjiSupplementary, e); |
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260 ASSERT_FALSE(GetDicomEncoding(e, "ISO 2022 IR 149")); //ASSERT_EQ(Encoding_Korean, e); |
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261 |
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262 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-5 |
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263 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 192")); ASSERT_EQ(Encoding_Utf8, e); |
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264 ASSERT_TRUE(GetDicomEncoding(e, "GB18030")); ASSERT_EQ(Encoding_Chinese, e); |
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265 } |
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266 |
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267 |
1091 | 268 TEST(FromDcmtkBridge, Encodings3) |
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269 { |
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270 for (unsigned int i = 0; i < testEncodingsCount; i++) |
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271 { |
1695 | 272 //std::cout << EnumerationToString(testEncodings[i]) << std::endl; |
1091 | 273 std::string dicom; |
274 | |
275 { | |
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276 ParsedDicomFile f(true); |
1091 | 277 f.SetEncoding(testEncodings[i]); |
1695 | 278 |
279 std::string s = Toolbox::ConvertToUtf8(testEncodingsEncoded[i], testEncodings[i]); | |
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280 f.Insert(DICOM_TAG_PATIENT_NAME, s, false); |
1091 | 281 f.SaveToMemoryBuffer(dicom); |
282 } | |
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283 |
1347 | 284 if (testEncodings[i] != Encoding_Windows1251) |
1091 | 285 { |
286 ParsedDicomFile g(dicom); | |
287 | |
288 if (testEncodings[i] != Encoding_Ascii) | |
289 { | |
290 ASSERT_EQ(testEncodings[i], g.GetEncoding()); | |
291 } | |
292 | |
293 std::string tag; | |
294 ASSERT_TRUE(g.GetTagValue(tag, DICOM_TAG_PATIENT_NAME)); | |
295 ASSERT_EQ(std::string(testEncodingsExpected[i]), tag); | |
296 } | |
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297 } |
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298 } |
1360 | 299 |
300 | |
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301 TEST(FromDcmtkBridge, ValueRepresentation) |
1360 | 302 { |
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303 ASSERT_EQ(ValueRepresentation_PersonName, |
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304 FromDcmtkBridge::LookupValueRepresentation(DICOM_TAG_PATIENT_NAME)); |
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305 ASSERT_EQ(ValueRepresentation_Date, |
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306 FromDcmtkBridge::LookupValueRepresentation(DicomTag(0x0008, 0x0020) /* StudyDate */)); |
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307 ASSERT_EQ(ValueRepresentation_Time, |
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308 FromDcmtkBridge::LookupValueRepresentation(DicomTag(0x0008, 0x0030) /* StudyTime */)); |
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309 ASSERT_EQ(ValueRepresentation_DateTime, |
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310 FromDcmtkBridge::LookupValueRepresentation(DicomTag(0x0008, 0x002a) /* AcquisitionDateTime */)); |
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311 ASSERT_EQ(ValueRepresentation_NotSupported, |
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312 FromDcmtkBridge::LookupValueRepresentation(DicomTag(0x0001, 0x0001) /* some private tag */)); |
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313 } |
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314 |
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315 |
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316 TEST(FromDcmtkBridge, ValueRepresentationConversions) |
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317 { |
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318 ASSERT_EQ(1, ValueRepresentation_ApplicationEntity); |
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319 ASSERT_EQ(1, OrthancPluginValueRepresentation_AE); |
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320 |
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321 for (int i = ValueRepresentation_ApplicationEntity; |
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322 i <= ValueRepresentation_NotSupported; i++) |
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323 { |
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324 ValueRepresentation vr = static_cast<ValueRepresentation>(i); |
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325 |
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326 if (vr == ValueRepresentation_NotSupported) |
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327 { |
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328 ASSERT_THROW(ToDcmtkBridge::Convert(vr), OrthancException); |
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329 ASSERT_THROW(Plugins::Convert(vr), OrthancException); |
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330 } |
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331 else if (vr == ValueRepresentation_OtherDouble || |
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332 vr == ValueRepresentation_OtherLong || |
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333 vr == ValueRepresentation_UniversalResource || |
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334 vr == ValueRepresentation_UnlimitedCharacters) |
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335 { |
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336 // These VR are not supported as of DCMTK 3.6.0 |
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337 ASSERT_THROW(ToDcmtkBridge::Convert(vr), OrthancException); |
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338 ASSERT_EQ(OrthancPluginValueRepresentation_UN, Plugins::Convert(vr)); |
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339 } |
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340 else |
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341 { |
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342 ASSERT_EQ(vr, FromDcmtkBridge::Convert(ToDcmtkBridge::Convert(vr))); |
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343 |
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344 OrthancPluginValueRepresentation plugins = Plugins::Convert(vr); |
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345 ASSERT_EQ(vr, Plugins::Convert(plugins)); |
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346 } |
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347 } |
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348 |
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349 for (int i = OrthancPluginValueRepresentation_AE; |
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350 i <= OrthancPluginValueRepresentation_UT; i++) |
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351 { |
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352 OrthancPluginValueRepresentation plugins = static_cast<OrthancPluginValueRepresentation>(i); |
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353 ValueRepresentation orthanc = Plugins::Convert(plugins); |
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354 ASSERT_EQ(plugins, Plugins::Convert(orthanc)); |
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355 } |
1360 | 356 } |
1690 | 357 |
358 | |
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359 |
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360 static const DicomTag REFERENCED_STUDY_SEQUENCE(0x0008, 0x1110); |
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361 static const DicomTag REFERENCED_PATIENT_SEQUENCE(0x0008, 0x1120); |
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362 |
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363 static void CreateSampleJson(Json::Value& a) |
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364 { |
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365 { |
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366 Json::Value b = Json::objectValue; |
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367 b["PatientName"] = "Hello"; |
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368 b["PatientID"] = "World"; |
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369 b["StudyDescription"] = "Toto"; |
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370 a.append(b); |
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371 } |
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372 |
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373 { |
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374 Json::Value b = Json::objectValue; |
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375 b["PatientName"] = "data:application/octet-stream;base64,SGVsbG8y"; // echo -n "Hello2" | base64 |
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376 b["PatientID"] = "World2"; |
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377 a.append(b); |
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378 } |
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379 } |
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380 |
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381 |
2126 | 382 namespace Orthanc |
1690 | 383 { |
2126 | 384 // Namespace for the "FRIEND_TEST()" directive in "FromDcmtkBridge" to apply: |
385 // https://github.com/google/googletest/blob/master/googletest/docs/AdvancedGuide.md#private-class-members | |
386 TEST(FromDcmtkBridge, FromJson) | |
1690 | 387 { |
2126 | 388 std::auto_ptr<DcmElement> element; |
1690 | 389 |
390 { | |
2126 | 391 Json::Value a; |
392 a = "Hello"; | |
393 element.reset(FromDcmtkBridge::FromJson(DICOM_TAG_PATIENT_NAME, a, false, Encoding_Utf8)); | |
394 | |
1690 | 395 Json::Value b; |
2126 | 396 FromDcmtkBridge::ElementToJson(b, *element, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0, Encoding_Ascii); |
397 ASSERT_EQ("Hello", b["0010,0010"].asString()); | |
398 } | |
1690 | 399 |
2126 | 400 { |
401 Json::Value a; | |
402 a = "Hello"; | |
403 // Cannot assign a string to a sequence | |
404 ASSERT_THROW(element.reset(FromDcmtkBridge::FromJson(REFERENCED_STUDY_SEQUENCE, a, false, Encoding_Utf8)), OrthancException); | |
405 } | |
406 | |
407 { | |
408 Json::Value a = Json::arrayValue; | |
409 a.append("Hello"); | |
410 // Cannot assign an array to a string | |
411 ASSERT_THROW(element.reset(FromDcmtkBridge::FromJson(DICOM_TAG_PATIENT_NAME, a, false, Encoding_Utf8)), OrthancException); | |
1690 | 412 } |
413 | |
1692 | 414 { |
2126 | 415 Json::Value a; |
416 a = "data:application/octet-stream;base64,SGVsbG8="; // echo -n "Hello" | base64 | |
417 element.reset(FromDcmtkBridge::FromJson(DICOM_TAG_PATIENT_NAME, a, true, Encoding_Utf8)); | |
418 | |
1692 | 419 Json::Value b; |
2126 | 420 FromDcmtkBridge::ElementToJson(b, *element, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0, Encoding_Ascii); |
421 ASSERT_EQ("Hello", b["0010,0010"].asString()); | |
422 } | |
423 | |
424 { | |
425 Json::Value a = Json::arrayValue; | |
426 CreateSampleJson(a); | |
427 element.reset(FromDcmtkBridge::FromJson(REFERENCED_STUDY_SEQUENCE, a, true, Encoding_Utf8)); | |
1690 | 428 |
2126 | 429 { |
430 Json::Value b; | |
431 FromDcmtkBridge::ElementToJson(b, *element, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0, Encoding_Ascii); | |
432 ASSERT_EQ(Json::arrayValue, b["0008,1110"].type()); | |
433 ASSERT_EQ(2u, b["0008,1110"].size()); | |
434 | |
435 Json::Value::ArrayIndex i = (b["0008,1110"][0]["0010,0010"].asString() == "Hello") ? 0 : 1; | |
1690 | 436 |
2126 | 437 ASSERT_EQ(3u, b["0008,1110"][i].size()); |
438 ASSERT_EQ(2u, b["0008,1110"][1 - i].size()); | |
439 ASSERT_EQ(b["0008,1110"][i]["0010,0010"].asString(), "Hello"); | |
440 ASSERT_EQ(b["0008,1110"][i]["0010,0020"].asString(), "World"); | |
441 ASSERT_EQ(b["0008,1110"][i]["0008,1030"].asString(), "Toto"); | |
442 ASSERT_EQ(b["0008,1110"][1 - i]["0010,0010"].asString(), "Hello2"); | |
443 ASSERT_EQ(b["0008,1110"][1 - i]["0010,0020"].asString(), "World2"); | |
444 } | |
445 | |
446 { | |
447 Json::Value b; | |
448 FromDcmtkBridge::ElementToJson(b, *element, DicomToJsonFormat_Full, DicomToJsonFlags_Default, 0, Encoding_Ascii); | |
449 | |
450 Json::Value c; | |
451 ServerToolbox::SimplifyTags(c, b, DicomToJsonFormat_Human); | |
452 | |
453 a[1]["PatientName"] = "Hello2"; // To remove the Data URI Scheme encoding | |
454 ASSERT_EQ(0, c["ReferencedStudySequence"].compare(a)); | |
455 } | |
1692 | 456 } |
457 } | |
1690 | 458 } |
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459 |
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460 |
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461 TEST(ParsedDicomFile, InsertReplaceStrings) |
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462 { |
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463 ParsedDicomFile f(true); |
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464 |
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465 f.Insert(DICOM_TAG_PATIENT_NAME, "World", false); |
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466 ASSERT_THROW(f.Insert(DICOM_TAG_PATIENT_ID, "Hello", false), OrthancException); // Already existing tag |
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467 f.ReplacePlainString(DICOM_TAG_SOP_INSTANCE_UID, "Toto"); // (*) |
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468 f.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, "Tata"); // (**) |
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469 |
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470 std::string s; |
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471 |
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472 ASSERT_THROW(f.Replace(DICOM_TAG_ACCESSION_NUMBER, std::string("Accession"), |
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473 false, DicomReplaceMode_ThrowIfAbsent), OrthancException); |
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474 f.Replace(DICOM_TAG_ACCESSION_NUMBER, std::string("Accession"), false, DicomReplaceMode_IgnoreIfAbsent); |
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475 ASSERT_FALSE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER)); |
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476 f.Replace(DICOM_TAG_ACCESSION_NUMBER, std::string("Accession"), false, DicomReplaceMode_InsertIfAbsent); |
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477 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER)); |
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478 ASSERT_EQ(s, "Accession"); |
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479 f.Replace(DICOM_TAG_ACCESSION_NUMBER, std::string("Accession2"), false, DicomReplaceMode_IgnoreIfAbsent); |
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480 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER)); |
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481 ASSERT_EQ(s, "Accession2"); |
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482 f.Replace(DICOM_TAG_ACCESSION_NUMBER, std::string("Accession3"), false, DicomReplaceMode_ThrowIfAbsent); |
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483 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER)); |
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484 ASSERT_EQ(s, "Accession3"); |
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485 |
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486 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_PATIENT_NAME)); |
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487 ASSERT_EQ(s, "World"); |
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488 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_INSTANCE_UID)); |
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489 ASSERT_EQ(s, "Toto"); |
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490 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_INSTANCE_UID)); // Implicitly modified by (*) |
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491 ASSERT_EQ(s, "Toto"); |
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492 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_CLASS_UID)); |
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493 ASSERT_EQ(s, "Tata"); |
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494 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_CLASS_UID)); // Implicitly modified by (**) |
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495 ASSERT_EQ(s, "Tata"); |
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496 } |
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497 |
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498 |
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499 |
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500 |
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501 TEST(ParsedDicomFile, InsertReplaceJson) |
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502 { |
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503 ParsedDicomFile f(true); |
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504 |
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505 Json::Value a; |
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506 CreateSampleJson(a); |
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507 |
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508 ASSERT_FALSE(f.HasTag(REFERENCED_STUDY_SEQUENCE)); |
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509 f.Remove(REFERENCED_STUDY_SEQUENCE); // No effect |
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510 f.Insert(REFERENCED_STUDY_SEQUENCE, a, true); |
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511 ASSERT_TRUE(f.HasTag(REFERENCED_STUDY_SEQUENCE)); |
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512 ASSERT_THROW(f.Insert(REFERENCED_STUDY_SEQUENCE, a, true), OrthancException); |
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513 f.Remove(REFERENCED_STUDY_SEQUENCE); |
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514 ASSERT_FALSE(f.HasTag(REFERENCED_STUDY_SEQUENCE)); |
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515 f.Insert(REFERENCED_STUDY_SEQUENCE, a, true); |
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516 ASSERT_TRUE(f.HasTag(REFERENCED_STUDY_SEQUENCE)); |
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517 |
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518 ASSERT_FALSE(f.HasTag(REFERENCED_PATIENT_SEQUENCE)); |
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519 ASSERT_THROW(f.Replace(REFERENCED_PATIENT_SEQUENCE, a, false, DicomReplaceMode_ThrowIfAbsent), OrthancException); |
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520 ASSERT_FALSE(f.HasTag(REFERENCED_PATIENT_SEQUENCE)); |
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521 f.Replace(REFERENCED_PATIENT_SEQUENCE, a, false, DicomReplaceMode_IgnoreIfAbsent); |
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522 ASSERT_FALSE(f.HasTag(REFERENCED_PATIENT_SEQUENCE)); |
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523 f.Replace(REFERENCED_PATIENT_SEQUENCE, a, false, DicomReplaceMode_InsertIfAbsent); |
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524 ASSERT_TRUE(f.HasTag(REFERENCED_PATIENT_SEQUENCE)); |
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525 |
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526 { |
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527 Json::Value b; |
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528 f.DatasetToJson(b, DicomToJsonFormat_Full, DicomToJsonFlags_Default, 0); |
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529 |
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530 Json::Value c; |
2120 | 531 ServerToolbox::SimplifyTags(c, b, DicomToJsonFormat_Human); |
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532 |
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533 ASSERT_EQ(0, c["ReferencedPatientSequence"].compare(a)); |
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534 ASSERT_NE(0, c["ReferencedStudySequence"].compare(a)); // Because Data URI Scheme decoding was enabled |
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535 } |
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536 |
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537 a = "data:application/octet-stream;base64,VGF0YQ=="; // echo -n "Tata" | base64 |
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538 f.Replace(DICOM_TAG_SOP_INSTANCE_UID, a, false, DicomReplaceMode_InsertIfAbsent); // (*) |
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539 f.Replace(DICOM_TAG_SOP_CLASS_UID, a, true, DicomReplaceMode_InsertIfAbsent); // (**) |
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540 |
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541 std::string s; |
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542 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_INSTANCE_UID)); |
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543 ASSERT_EQ(s, a.asString()); |
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544 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_INSTANCE_UID)); // Implicitly modified by (*) |
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545 ASSERT_EQ(s, a.asString()); |
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
546 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_CLASS_UID)); |
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1692
diff
changeset
|
547 ASSERT_EQ(s, "Tata"); |
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1692
diff
changeset
|
548 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_CLASS_UID)); // Implicitly modified by (**) |
558b25228a23
creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
549 ASSERT_EQ(s, "Tata"); |
558b25228a23
creation of tag hierarchy from json
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parents:
1692
diff
changeset
|
550 } |
1695 | 551 |
552 | |
553 TEST(ParsedDicomFile, JsonEncoding) | |
554 { | |
1805
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
555 ParsedDicomFile f(true); |
1695 | 556 |
557 for (unsigned int i = 0; i < testEncodingsCount; i++) | |
558 { | |
559 if (testEncodings[i] != Encoding_Windows1251) | |
560 { | |
561 //std::cout << EnumerationToString(testEncodings[i]) << std::endl; | |
562 f.SetEncoding(testEncodings[i]); | |
563 | |
564 if (testEncodings[i] != Encoding_Ascii) | |
565 { | |
566 ASSERT_EQ(testEncodings[i], f.GetEncoding()); | |
567 } | |
568 | |
569 Json::Value s = Toolbox::ConvertToUtf8(testEncodingsEncoded[i], testEncodings[i]); | |
1982
b5d4f9c156ad
Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
570 f.Replace(DICOM_TAG_PATIENT_NAME, s, false, DicomReplaceMode_InsertIfAbsent); |
1695 | 571 |
572 Json::Value v; | |
2128
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
573 f.DatasetToJson(v, DicomToJsonFormat_Human, DicomToJsonFlags_Default, 0); |
1695 | 574 ASSERT_EQ(v["PatientName"].asString(), std::string(testEncodingsExpected[i])); |
575 } | |
576 } | |
577 } | |
1735
a001f6226c7c
primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
578 |
1739
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
579 |
df331354cea2
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580 TEST(ParsedDicomFile, ToJsonFlags1) |
1735
a001f6226c7c
primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
581 { |
2115
a657f7772e69
Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
582 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7053, 0x1000), ValueRepresentation_PersonName, "MyPrivateTag", 1, 1, ""); |
a657f7772e69
Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2107
diff
changeset
|
583 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7050, 0x1000), ValueRepresentation_PersonName, "Declared public tag", 1, 1, ""); |
1736
b953c6eef28d
ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1735
diff
changeset
|
584 |
1805
f08978b1f45b
c-find scu for modality worklists
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parents:
1789
diff
changeset
|
585 ParsedDicomFile f(true); |
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parents:
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diff
changeset
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586 f.Insert(DicomTag(0x7050, 0x1000), "Some public tag", false); // Even group => public tag |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
587 f.Insert(DicomTag(0x7052, 0x1000), "Some unknown tag", false); // Even group => public, unknown tag |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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changeset
|
588 f.Insert(DicomTag(0x7053, 0x1000), "Some private tag", false); // Odd group => private tag |
df331354cea2
include binary in ToJson
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parents:
1736
diff
changeset
|
589 |
df331354cea2
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parents:
1736
diff
changeset
|
590 Json::Value v; |
2128
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2126
diff
changeset
|
591 f.DatasetToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_None, 0); |
1739
df331354cea2
include binary in ToJson
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diff
changeset
|
592 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
593 ASSERT_EQ(6u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
594 ASSERT_FALSE(v.isMember("7052,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
595 ASSERT_FALSE(v.isMember("7053,1000")); |
df331354cea2
include binary in ToJson
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parents:
1736
diff
changeset
|
596 ASSERT_TRUE(v.isMember("7050,1000")); |
df331354cea2
include binary in ToJson
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parents:
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diff
changeset
|
597 ASSERT_EQ(Json::stringValue, v["7050,1000"].type()); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
598 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
1735
a001f6226c7c
primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
599 |
2128
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2126
diff
changeset
|
600 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePrivateTags | DicomToJsonFlags_ConvertBinaryToNull), 0); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
601 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
602 ASSERT_EQ(7u, v.getMemberNames().size()); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
603 ASSERT_FALSE(v.isMember("7052,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
604 ASSERT_TRUE(v.isMember("7050,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
605 ASSERT_TRUE(v.isMember("7053,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
606 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
607 ASSERT_EQ(Json::nullValue, v["7053,1000"].type()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
608 |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents:
2126
diff
changeset
|
609 f.DatasetToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_IncludePrivateTags, 0); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
610 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
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parents:
1970
diff
changeset
|
611 ASSERT_EQ(7u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
612 ASSERT_FALSE(v.isMember("7052,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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1736
diff
changeset
|
613 ASSERT_TRUE(v.isMember("7050,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
614 ASSERT_TRUE(v.isMember("7053,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
615 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
616 std::string mime, content; |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
617 ASSERT_EQ(Json::stringValue, v["7053,1000"].type()); |
1981
4b545a8b1f95
return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1971
diff
changeset
|
618 ASSERT_TRUE(Toolbox::DecodeDataUriScheme(mime, content, v["7053,1000"].asString())); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
619 ASSERT_EQ("application/octet-stream", mime); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
620 ASSERT_EQ("Some private tag", content); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
621 |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2126
diff
changeset
|
622 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeUnknownTags | DicomToJsonFlags_ConvertBinaryToNull), 0); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
623 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
624 ASSERT_EQ(7u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
625 ASSERT_TRUE(v.isMember("7050,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
626 ASSERT_TRUE(v.isMember("7052,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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1736
diff
changeset
|
627 ASSERT_FALSE(v.isMember("7053,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
628 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
629 ASSERT_EQ(Json::nullValue, v["7052,1000"].type()); |
1735
a001f6226c7c
primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
630 |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2126
diff
changeset
|
631 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeUnknownTags), 0); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
632 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
633 ASSERT_EQ(7u, v.getMemberNames().size()); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
634 ASSERT_TRUE(v.isMember("7050,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
635 ASSERT_TRUE(v.isMember("7052,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
636 ASSERT_FALSE(v.isMember("7053,1000")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
637 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
638 ASSERT_EQ(Json::stringValue, v["7052,1000"].type()); |
1981
4b545a8b1f95
return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1971
diff
changeset
|
639 ASSERT_TRUE(Toolbox::DecodeDataUriScheme(mime, content, v["7052,1000"].asString())); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
640 ASSERT_EQ("application/octet-stream", mime); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
641 ASSERT_EQ("Some unknown tag", content); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
642 |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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parents:
2126
diff
changeset
|
643 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeUnknownTags | DicomToJsonFlags_IncludePrivateTags | DicomToJsonFlags_ConvertBinaryToNull), 0); |
1739
df331354cea2
include binary in ToJson
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parents:
1736
diff
changeset
|
644 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
645 ASSERT_EQ(8u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
646 ASSERT_TRUE(v.isMember("7050,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
647 ASSERT_TRUE(v.isMember("7052,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
648 ASSERT_TRUE(v.isMember("7053,1000")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
649 ASSERT_EQ("Some public tag", v["7050,1000"].asString()); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
650 ASSERT_EQ(Json::nullValue, v["7052,1000"].type()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
651 ASSERT_EQ(Json::nullValue, v["7053,1000"].type()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
652 } |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
653 |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
654 |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
655 TEST(ParsedDicomFile, ToJsonFlags2) |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
656 { |
1805
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1789
diff
changeset
|
657 ParsedDicomFile f(true); |
1739
df331354cea2
include binary in ToJson
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1736
diff
changeset
|
658 f.Insert(DICOM_TAG_PIXEL_DATA, "Pixels", false); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
659 |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
660 Json::Value v; |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
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2126
diff
changeset
|
661 f.DatasetToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_None, 0); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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1736
diff
changeset
|
662 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
663 ASSERT_EQ(5u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
664 ASSERT_FALSE(v.isMember("7fe0,0010")); |
1736
b953c6eef28d
ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1735
diff
changeset
|
665 |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2126
diff
changeset
|
666 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePixelData | DicomToJsonFlags_ConvertBinaryToNull), 0); |
1739
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include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
667 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
668 ASSERT_EQ(6u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
669 ASSERT_TRUE(v.isMember("7fe0,0010")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
670 ASSERT_EQ(Json::nullValue, v["7fe0,0010"].type()); |
1736
b953c6eef28d
ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1735
diff
changeset
|
671 |
2128
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2126
diff
changeset
|
672 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePixelData | DicomToJsonFlags_ConvertBinaryToAscii), 0); |
1739
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|
673 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
674 ASSERT_EQ(6u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
675 ASSERT_TRUE(v.isMember("7fe0,0010")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
676 ASSERT_EQ(Json::stringValue, v["7fe0,0010"].type()); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
677 ASSERT_EQ("Pixels", v["7fe0,0010"].asString()); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
678 |
2128
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Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
679 f.DatasetToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_IncludePixelData, 0); |
1739
df331354cea2
include binary in ToJson
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diff
changeset
|
680 ASSERT_EQ(Json::objectValue, v.type()); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
681 ASSERT_EQ(6u, v.getMemberNames().size()); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
682 ASSERT_TRUE(v.isMember("7fe0,0010")); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
683 ASSERT_EQ(Json::stringValue, v["7fe0,0010"].type()); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
684 std::string mime, content; |
1981
4b545a8b1f95
return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1971
diff
changeset
|
685 ASSERT_TRUE(Toolbox::DecodeDataUriScheme(mime, content, v["7fe0,0010"].asString())); |
1739
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
686 ASSERT_EQ("application/octet-stream", mime); |
df331354cea2
include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1736
diff
changeset
|
687 ASSERT_EQ("Pixels", content); |
1735
a001f6226c7c
primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
688 } |
1787
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
689 |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
690 |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
691 TEST(DicomFindAnswers, Basic) |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
692 { |
2059 | 693 DicomFindAnswers a(false); |
1787
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
694 |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
695 { |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
696 DicomMap m; |
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2006
diff
changeset
|
697 m.SetValue(DICOM_TAG_PATIENT_ID, "hello", false); |
1787
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
698 a.Add(m); |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
699 } |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
700 |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
701 { |
1805
f08978b1f45b
c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1789
diff
changeset
|
702 ParsedDicomFile d(true); |
1982
b5d4f9c156ad
Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
703 d.ReplacePlainString(DICOM_TAG_PATIENT_ID, "my"); |
1789 | 704 a.Add(d); |
705 } | |
706 | |
707 { | |
1787
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
708 DicomMap m; |
2007
655489d9165d
DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2006
diff
changeset
|
709 m.SetValue(DICOM_TAG_PATIENT_ID, "world", false); |
1787
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
710 a.Add(m); |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
711 } |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
712 |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
713 Json::Value j; |
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
714 a.ToJson(j, true); |
1789 | 715 ASSERT_EQ(3u, j.size()); |
716 | |
717 //std::cout << j; | |
1787
1b1d5470233f
refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1739
diff
changeset
|
718 } |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
719 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
720 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
721 TEST(ParsedDicomFile, FromJson) |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
722 { |
2117 | 723 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7057, 0x1000), ValueRepresentation_OtherByte, "MyPrivateTag2", 1, 1, "ORTHANC"); |
724 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7059, 0x1000), ValueRepresentation_OtherByte, "MyPrivateTag3", 1, 1, ""); | |
725 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7050, 0x1000), ValueRepresentation_PersonName, "Declared public tag2", 1, 1, ""); | |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
726 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
727 Json::Value v; |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
728 const std::string sopClassUid = "1.2.840.10008.5.1.4.1.1.1"; // CR Image Storage: |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
729 |
2117 | 730 // Test the private creator |
731 ASSERT_EQ(DcmTag_ERROR_TagName, FromDcmtkBridge::GetTagName(DicomTag(0x7057, 0x1000), "NOPE")); | |
732 ASSERT_EQ("MyPrivateTag2", FromDcmtkBridge::GetTagName(DicomTag(0x7057, 0x1000), "ORTHANC")); | |
733 | |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
734 { |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
735 v["SOPClassUID"] = sopClassUid; |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
736 v["SpecificCharacterSet"] = "ISO_IR 148"; // This is latin-5 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
737 v["PatientName"] = "Sébastien"; |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
738 v["7050-1000"] = "Some public tag"; // Even group => public tag |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
739 v["7052-1000"] = "Some unknown tag"; // Even group => public, unknown tag |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
740 v["7057-1000"] = "Some private tag"; // Odd group => private tag |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
741 v["7059-1000"] = "Some private tag2"; // Odd group => private tag, with an odd length to test padding |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
742 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
743 std::string s; |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
744 Toolbox::EncodeDataUriScheme(s, "application/octet-stream", "Sebastien"); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
745 v["StudyDescription"] = s; |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
746 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
747 v["PixelData"] = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg=="; // A red dot of 5x5 pixels |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
748 v["0040,0100"] = Json::arrayValue; // ScheduledProcedureStepSequence |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
749 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
750 Json::Value vv; |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
751 vv["Modality"] = "MR"; |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
752 v["0040,0100"].append(vv); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
753 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
754 vv["Modality"] = "CT"; |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
755 v["0040,0100"].append(vv); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
756 } |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
757 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
758 const DicomToJsonFlags toJsonFlags = static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeBinary | |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
759 DicomToJsonFlags_IncludePixelData | |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
760 DicomToJsonFlags_IncludePrivateTags | |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
761 DicomToJsonFlags_IncludeUnknownTags | |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
762 DicomToJsonFlags_ConvertBinaryToAscii); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
763 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
764 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
765 { |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
766 std::auto_ptr<ParsedDicomFile> dicom |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
767 (ParsedDicomFile::CreateFromJson(v, static_cast<DicomFromJsonFlags>(DicomFromJsonFlags_GenerateIdentifiers))); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
768 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
769 Json::Value vv; |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2126
diff
changeset
|
770 dicom->DatasetToJson(vv, DicomToJsonFormat_Human, toJsonFlags, 0); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
771 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
772 ASSERT_EQ(vv["SOPClassUID"].asString(), sopClassUid); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
773 ASSERT_EQ(vv["MediaStorageSOPClassUID"].asString(), sopClassUid); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
774 ASSERT_TRUE(vv.isMember("SOPInstanceUID")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
775 ASSERT_TRUE(vv.isMember("SeriesInstanceUID")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
776 ASSERT_TRUE(vv.isMember("StudyInstanceUID")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
777 ASSERT_TRUE(vv.isMember("PatientID")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
778 } |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
779 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
780 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
781 { |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
782 std::auto_ptr<ParsedDicomFile> dicom |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
783 (ParsedDicomFile::CreateFromJson(v, static_cast<DicomFromJsonFlags>(DicomFromJsonFlags_GenerateIdentifiers))); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
784 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
785 Json::Value vv; |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2126
diff
changeset
|
786 dicom->DatasetToJson(vv, DicomToJsonFormat_Human, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePixelData), 0); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
787 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
788 std::string mime, content; |
1981
4b545a8b1f95
return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1971
diff
changeset
|
789 ASSERT_TRUE(Toolbox::DecodeDataUriScheme(mime, content, vv["PixelData"].asString())); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
790 ASSERT_EQ("application/octet-stream", mime); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
791 ASSERT_EQ(5u * 5u * 3u /* the red dot is 5x5 pixels in RGB24 */ + 1 /* for padding */, content.size()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
792 } |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
793 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
794 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
795 { |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
796 std::auto_ptr<ParsedDicomFile> dicom |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
797 (ParsedDicomFile::CreateFromJson(v, static_cast<DicomFromJsonFlags>(DicomFromJsonFlags_DecodeDataUriScheme))); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
798 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
799 Json::Value vv; |
2128
9329ba17a069
Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2126
diff
changeset
|
800 dicom->DatasetToJson(vv, DicomToJsonFormat_Short, toJsonFlags, 0); |
1818
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
801 |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
802 ASSERT_FALSE(vv.isMember("SOPInstanceUID")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
803 ASSERT_FALSE(vv.isMember("SeriesInstanceUID")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
804 ASSERT_FALSE(vv.isMember("StudyInstanceUID")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
805 ASSERT_FALSE(vv.isMember("PatientID")); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
806 ASSERT_EQ(2u, vv["0040,0100"].size()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
807 ASSERT_EQ("MR", vv["0040,0100"][0]["0008,0060"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
808 ASSERT_EQ("CT", vv["0040,0100"][1]["0008,0060"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
809 ASSERT_EQ("Some public tag", vv["7050,1000"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
810 ASSERT_EQ("Some unknown tag", vv["7052,1000"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
811 ASSERT_EQ("Some private tag", vv["7057,1000"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
812 ASSERT_EQ("Some private tag2", vv["7059,1000"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
813 ASSERT_EQ("Sébastien", vv["0010,0010"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
814 ASSERT_EQ("Sebastien", vv["0008,1030"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
815 ASSERT_EQ("ISO_IR 148", vv["0008,0005"].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
816 ASSERT_EQ("5", vv[DICOM_TAG_ROWS.Format()].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
817 ASSERT_EQ("5", vv[DICOM_TAG_COLUMNS.Format()].asString()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
818 ASSERT_TRUE(vv[DICOM_TAG_PIXEL_DATA.Format()].asString().empty()); |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
819 } |
1065401501fb
ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1805
diff
changeset
|
820 } |
1937 | 821 |
822 | |
823 | |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
824 TEST(TestImages, PatternGrayscale8) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
825 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
826 static const char* PATH = "UnitTestsResults/PatternGrayscale8.dcm"; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
827 |
2107 | 828 Orthanc::Image image(Orthanc::PixelFormat_Grayscale8, 256, 256, false); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
829 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
830 for (int y = 0; y < 256; y++) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
831 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
832 uint8_t *p = reinterpret_cast<uint8_t*>(image.GetRow(y)); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
833 for (int x = 0; x < 256; x++, p++) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
834 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
835 *p = y; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
836 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
837 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
838 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
839 Orthanc::ImageAccessor r = image.GetRegion(32, 32, 64, 192); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
840 Orthanc::ImageProcessing::Set(r, 0); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
841 r = image.GetRegion(160, 32, 64, 192); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
842 Orthanc::ImageProcessing::Set(r, 255); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
843 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
844 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
845 ParsedDicomFile f(true); |
1982
b5d4f9c156ad
Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
846 f.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7"); |
b5d4f9c156ad
Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
847 f.ReplacePlainString(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998"); |
b5d4f9c156ad
Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
848 f.ReplacePlainString(DICOM_TAG_PATIENT_ID, "ORTHANC"); |
b5d4f9c156ad
Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
849 f.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "Orthanc"); |
b5d4f9c156ad
Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
850 f.ReplacePlainString(DICOM_TAG_STUDY_DESCRIPTION, "Patterns"); |
b5d4f9c156ad
Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
851 f.ReplacePlainString(DICOM_TAG_SERIES_DESCRIPTION, "Grayscale8"); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
852 f.EmbedImage(image); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
853 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
854 f.SaveToFile(PATH); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
855 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
856 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
857 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
858 std::string s; |
2140 | 859 Orthanc::SystemToolbox::ReadFile(s, PATH); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
860 Orthanc::ParsedDicomFile f(s); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
861 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
862 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0)); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
863 ASSERT_EQ(256u, decoded->GetWidth()); |
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
864 ASSERT_EQ(256u, decoded->GetHeight()); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
865 ASSERT_EQ(Orthanc::PixelFormat_Grayscale8, decoded->GetFormat()); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
866 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
867 for (int y = 0; y < 256; y++) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
868 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
869 const void* a = image.GetConstRow(y); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
870 const void* b = decoded->GetConstRow(y); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
871 ASSERT_EQ(0, memcmp(a, b, 256)); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
872 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
873 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
874 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
875 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
876 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
877 TEST(TestImages, PatternRGB) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
878 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
879 static const char* PATH = "UnitTestsResults/PatternRGB24.dcm"; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
880 |
2107 | 881 Orthanc::Image image(Orthanc::PixelFormat_RGB24, 384, 256, false); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
882 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
883 for (int y = 0; y < 256; y++) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
884 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
885 uint8_t *p = reinterpret_cast<uint8_t*>(image.GetRow(y)); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
886 for (int x = 0; x < 128; x++, p += 3) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
887 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
888 p[0] = y; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
889 p[1] = 0; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
890 p[2] = 0; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
891 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
892 for (int x = 128; x < 128 * 2; x++, p += 3) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
893 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
894 p[0] = 0; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
895 p[1] = 255 - y; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
896 p[2] = 0; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
897 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
898 for (int x = 128 * 2; x < 128 * 3; x++, p += 3) |
d7b176f7dd1b
test dicom patterns
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diff
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|
899 { |
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diff
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|
900 p[0] = 0; |
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test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
901 p[1] = 0; |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
902 p[2] = y; |
d7b176f7dd1b
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parents:
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diff
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|
903 } |
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test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
904 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
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1940
diff
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|
905 |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
906 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
907 ParsedDicomFile f(true); |
1982
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Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
908 f.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7"); |
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Modification of instances can now replace PixelData
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parents:
1981
diff
changeset
|
909 f.ReplacePlainString(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998"); |
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Modification of instances can now replace PixelData
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parents:
1981
diff
changeset
|
910 f.ReplacePlainString(DICOM_TAG_PATIENT_ID, "ORTHANC"); |
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Modification of instances can now replace PixelData
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parents:
1981
diff
changeset
|
911 f.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "Orthanc"); |
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Modification of instances can now replace PixelData
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parents:
1981
diff
changeset
|
912 f.ReplacePlainString(DICOM_TAG_STUDY_DESCRIPTION, "Patterns"); |
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Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
913 f.ReplacePlainString(DICOM_TAG_SERIES_DESCRIPTION, "RGB24"); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
914 f.EmbedImage(image); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
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|
915 |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
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|
916 f.SaveToFile(PATH); |
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diff
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|
917 } |
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parents:
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diff
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|
918 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
919 { |
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test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
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|
920 std::string s; |
2140 | 921 Orthanc::SystemToolbox::ReadFile(s, PATH); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
922 Orthanc::ParsedDicomFile f(s); |
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parents:
1940
diff
changeset
|
923 |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
924 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0)); |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
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|
925 ASSERT_EQ(384u, decoded->GetWidth()); |
869a87c08673
fix for mingw <= 4.2
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parents:
1970
diff
changeset
|
926 ASSERT_EQ(256u, decoded->GetHeight()); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
927 ASSERT_EQ(Orthanc::PixelFormat_RGB24, decoded->GetFormat()); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
928 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
929 for (int y = 0; y < 256; y++) |
d7b176f7dd1b
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parents:
1940
diff
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|
930 { |
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parents:
1940
diff
changeset
|
931 const void* a = image.GetConstRow(y); |
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test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
932 const void* b = decoded->GetConstRow(y); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
933 ASSERT_EQ(0, memcmp(a, b, 3 * 384)); |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
934 } |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
935 } |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
936 } |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
937 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
938 |
1940 | 939 TEST(TestImages, PatternUint16) |
1937 | 940 { |
1940 | 941 static const char* PATH = "UnitTestsResults/PatternGrayscale16.dcm"; |
942 | |
2107 | 943 Orthanc::Image image(Orthanc::PixelFormat_Grayscale16, 256, 256, false); |
1937 | 944 |
945 uint16_t v = 0; | |
946 for (int y = 0; y < 256; y++) | |
947 { | |
948 uint16_t *p = reinterpret_cast<uint16_t*>(image.GetRow(y)); | |
949 for (int x = 0; x < 256; x++, v++, p++) | |
950 { | |
1940 | 951 *p = htole16(v); // Orthanc uses Little-Endian transfer syntax to encode images |
1937 | 952 } |
953 } | |
954 | |
1940 | 955 Orthanc::ImageAccessor r = image.GetRegion(32, 32, 64, 192); |
956 Orthanc::ImageProcessing::Set(r, 0); | |
957 r = image.GetRegion(160, 32, 64, 192); | |
958 Orthanc::ImageProcessing::Set(r, 65535); | |
959 | |
960 { | |
961 ParsedDicomFile f(true); | |
1982
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Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
962 f.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7"); |
b5d4f9c156ad
Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
963 f.ReplacePlainString(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998"); |
b5d4f9c156ad
Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
964 f.ReplacePlainString(DICOM_TAG_PATIENT_ID, "ORTHANC"); |
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Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
965 f.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "Orthanc"); |
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Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
966 f.ReplacePlainString(DICOM_TAG_STUDY_DESCRIPTION, "Patterns"); |
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Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1981
diff
changeset
|
967 f.ReplacePlainString(DICOM_TAG_SERIES_DESCRIPTION, "Grayscale16"); |
1940 | 968 f.EmbedImage(image); |
969 | |
970 f.SaveToFile(PATH); | |
971 } | |
1937 | 972 |
1940 | 973 { |
974 std::string s; | |
2140 | 975 Orthanc::SystemToolbox::ReadFile(s, PATH); |
1940 | 976 Orthanc::ParsedDicomFile f(s); |
977 | |
978 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0)); | |
1971
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
979 ASSERT_EQ(256u, decoded->GetWidth()); |
869a87c08673
fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1970
diff
changeset
|
980 ASSERT_EQ(256u, decoded->GetHeight()); |
1940 | 981 ASSERT_EQ(Orthanc::PixelFormat_Grayscale16, decoded->GetFormat()); |
982 | |
983 for (int y = 0; y < 256; y++) | |
984 { | |
985 const void* a = image.GetConstRow(y); | |
986 const void* b = decoded->GetConstRow(y); | |
987 ASSERT_EQ(0, memcmp(a, b, 512)); | |
988 } | |
989 } | |
1937 | 990 } |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
991 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
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1940
diff
changeset
|
992 |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
993 TEST(TestImages, PatternInt16) |
d7b176f7dd1b
test dicom patterns
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diff
changeset
|
994 { |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
995 static const char* PATH = "UnitTestsResults/PatternSignedGrayscale16.dcm"; |
d7b176f7dd1b
test dicom patterns
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parents:
1940
diff
changeset
|
996 |
2107 | 997 Orthanc::Image image(Orthanc::PixelFormat_SignedGrayscale16, 256, 256, false); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
998 |
d7b176f7dd1b
test dicom patterns
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1940
diff
changeset
|
999 int16_t v = -32768; |
d7b176f7dd1b
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parents:
1940
diff
changeset
|
1000 for (int y = 0; y < 256; y++) |
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test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
1001 { |
d7b176f7dd1b
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parents:
1940
diff
changeset
|
1002 int16_t *p = reinterpret_cast<int16_t*>(image.GetRow(y)); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
1003 for (int x = 0; x < 256; x++, v++, p++) |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
1004 { |
d7b176f7dd1b
test dicom patterns
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parents:
1940
diff
changeset
|
1005 *p = htole16(v); // Orthanc uses Little-Endian transfer syntax to encode images |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
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|
1006 } |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
1007 } |
d7b176f7dd1b
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1940
diff
changeset
|
1008 |
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test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
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1940
diff
changeset
|
1009 Orthanc::ImageAccessor r = image.GetRegion(32, 32, 64, 192); |
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
1010 Orthanc::ImageProcessing::Set(r, -32768); |
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test dicom patterns
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parents:
1940
diff
changeset
|
1011 r = image.GetRegion(160, 32, 64, 192); |
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test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
1012 Orthanc::ImageProcessing::Set(r, 32767); |
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1940
diff
changeset
|
1013 |
d7b176f7dd1b
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1940
diff
changeset
|
1014 { |
d7b176f7dd1b
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diff
changeset
|
1015 ParsedDicomFile f(true); |
1982
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Modification of instances can now replace PixelData
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parents:
1981
diff
changeset
|
1016 f.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7"); |
b5d4f9c156ad
Modification of instances can now replace PixelData
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1981
diff
changeset
|
1017 f.ReplacePlainString(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998"); |
b5d4f9c156ad
Modification of instances can now replace PixelData
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parents:
1981
diff
changeset
|
1018 f.ReplacePlainString(DICOM_TAG_PATIENT_ID, "ORTHANC"); |
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parents:
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diff
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|
1019 f.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "Orthanc"); |
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parents:
1981
diff
changeset
|
1020 f.ReplacePlainString(DICOM_TAG_STUDY_DESCRIPTION, "Patterns"); |
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1981
diff
changeset
|
1021 f.ReplacePlainString(DICOM_TAG_SERIES_DESCRIPTION, "SignedGrayscale16"); |
1941
d7b176f7dd1b
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1940
diff
changeset
|
1022 f.EmbedImage(image); |
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1940
diff
changeset
|
1023 |
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parents:
1940
diff
changeset
|
1024 f.SaveToFile(PATH); |
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1940
diff
changeset
|
1025 } |
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1940
diff
changeset
|
1026 |
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1940
diff
changeset
|
1027 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1028 std::string s; |
2140 | 1029 Orthanc::SystemToolbox::ReadFile(s, PATH); |
1941
d7b176f7dd1b
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1940
diff
changeset
|
1030 Orthanc::ParsedDicomFile f(s); |
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1940
diff
changeset
|
1031 |
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1940
diff
changeset
|
1032 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0)); |
1971
869a87c08673
fix for mingw <= 4.2
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parents:
1970
diff
changeset
|
1033 ASSERT_EQ(256u, decoded->GetWidth()); |
869a87c08673
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parents:
1970
diff
changeset
|
1034 ASSERT_EQ(256u, decoded->GetHeight()); |
1941
d7b176f7dd1b
test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1940
diff
changeset
|
1035 ASSERT_EQ(Orthanc::PixelFormat_SignedGrayscale16, decoded->GetFormat()); |
d7b176f7dd1b
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1940
diff
changeset
|
1036 |
d7b176f7dd1b
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diff
changeset
|
1037 for (int y = 0; y < 256; y++) |
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1940
diff
changeset
|
1038 { |
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1940
diff
changeset
|
1039 const void* a = image.GetConstRow(y); |
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Sebastien Jodogne <s.jodogne@gmail.com>
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1940
diff
changeset
|
1040 const void* b = decoded->GetConstRow(y); |
d7b176f7dd1b
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Sebastien Jodogne <s.jodogne@gmail.com>
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1940
diff
changeset
|
1041 ASSERT_EQ(0, memcmp(a, b, 512)); |
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1940
diff
changeset
|
1042 } |
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diff
changeset
|
1043 } |
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1940
diff
changeset
|
1044 } |