annotate UnitTestsSources/FromDcmtkTests.cpp @ 2166:700dbb3baac9

refactoring in ServeFolders
author Sebastien Jodogne <s.jodogne@gmail.com>
date Tue, 22 Nov 2016 13:38:20 +0100
parents 5a8840920121
children 9b373b7d6713
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
1900
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 *
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6 * This program is free software: you can redistribute it and/or
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7 * modify it under the terms of the GNU General Public License as
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8 * published by the Free Software Foundation, either version 3 of the
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9 * License, or (at your option) any later version.
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10 *
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11 * In addition, as a special exception, the copyright holders of this
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12 * program give permission to link the code of its release with the
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13 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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14 * that use the same license as the "OpenSSL" library), and distribute
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15 * the linked executables. You must obey the GNU General Public License
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16 * in all respects for all of the code used other than "OpenSSL". If you
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17 * modify file(s) with this exception, you may extend this exception to
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18 * your version of the file(s), but you are not obligated to do so. If
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19 * you do not wish to do so, delete this exception statement from your
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20 * version. If you delete this exception statement from all source files
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21 * in the program, then also delete it here.
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22 *
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23 * This program is distributed in the hope that it will be useful, but
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24 * WITHOUT ANY WARRANTY; without even the implied warranty of
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25 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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26 * General Public License for more details.
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27 *
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28 * You should have received a copy of the GNU General Public License
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29 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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30 **/
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31
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32
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33 #include "PrecompiledHeadersUnitTests.h"
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34 #include "gtest/gtest.h"
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35
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36 #include "../OrthancServer/FromDcmtkBridge.h"
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37 #include "../OrthancServer/ToDcmtkBridge.h"
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38 #include "../OrthancServer/OrthancInitialization.h"
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39 #include "../OrthancServer/DicomModification.h"
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40 #include "../OrthancServer/ServerToolbox.h"
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41 #include "../Core/OrthancException.h"
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42 #include "../Core/Images/ImageBuffer.h"
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43 #include "../Core/Images/PngReader.h"
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44 #include "../Core/Images/PngWriter.h"
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45 #include "../Core/Images/Image.h"
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46 #include "../Core/Images/ImageProcessing.h"
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47 #include "../Core/Endianness.h"
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48 #include "../Resources/EncodingTests.h"
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49 #include "../OrthancServer/DicomProtocol/DicomFindAnswers.h"
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50 #include "../OrthancServer/Internals/DicomImageDecoder.h"
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51 #include "../Plugins/Engine/PluginsEnumerations.h"
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52
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53 #include <dcmtk/dcmdata/dcelem.h>
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54
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55 using namespace Orthanc;
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56
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57 TEST(DicomFormat, Tag)
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58 {
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59 ASSERT_EQ("PatientName", FromDcmtkBridge::GetTagName(DicomTag(0x0010, 0x0010), ""));
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60
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61 DicomTag t = FromDcmtkBridge::ParseTag("SeriesDescription");
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62 ASSERT_EQ(0x0008, t.GetGroup());
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63 ASSERT_EQ(0x103E, t.GetElement());
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64
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65 t = FromDcmtkBridge::ParseTag("0020-e040");
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66 ASSERT_EQ(0x0020, t.GetGroup());
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67 ASSERT_EQ(0xe040, t.GetElement());
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68
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69 // Test ==() and !=() operators
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70 ASSERT_TRUE(DICOM_TAG_PATIENT_ID == DicomTag(0x0010, 0x0020));
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71 ASSERT_FALSE(DICOM_TAG_PATIENT_ID != DicomTag(0x0010, 0x0020));
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72 }
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73
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74
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75 TEST(DicomModification, Basic)
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76 {
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77 DicomModification m;
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78 m.SetupAnonymization();
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79 //m.SetLevel(DicomRootLevel_Study);
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80 //m.ReplacePlainString(DICOM_TAG_PATIENT_ID, "coucou");
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81 //m.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "coucou");
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82
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83 ParsedDicomFile o(true);
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84 o.SaveToFile("UnitTestsResults/anon.dcm");
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85
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86 for (int i = 0; i < 10; i++)
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87 {
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88 char b[1024];
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89 sprintf(b, "UnitTestsResults/anon%06d.dcm", i);
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90 std::auto_ptr<ParsedDicomFile> f(o.Clone());
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91 if (i > 4)
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92 o.ReplacePlainString(DICOM_TAG_SERIES_INSTANCE_UID, "coucou");
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93 m.Apply(*f);
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94 f->SaveToFile(b);
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95 }
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96 }
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97
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98
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99 TEST(DicomModification, Anonymization)
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100 {
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101 ASSERT_EQ(DICOM_TAG_PATIENT_NAME, FromDcmtkBridge::ParseTag("PatientName"));
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102
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103 const DicomTag privateTag(0x0045, 0x0010);
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104 const DicomTag privateTag2(FromDcmtkBridge::ParseTag("0031-1020"));
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105 ASSERT_TRUE(privateTag.IsPrivate());
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106 ASSERT_TRUE(privateTag2.IsPrivate());
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107 ASSERT_EQ(0x0031, privateTag2.GetGroup());
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108 ASSERT_EQ(0x1020, privateTag2.GetElement());
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109
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110 std::string s;
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111 ParsedDicomFile o(true);
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112 o.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "coucou");
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113 ASSERT_FALSE(o.GetTagValue(s, privateTag));
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114 o.Insert(privateTag, "private tag", false);
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115 ASSERT_TRUE(o.GetTagValue(s, privateTag));
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116 ASSERT_STREQ("private tag", s.c_str());
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117
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118 ASSERT_FALSE(o.GetTagValue(s, privateTag2));
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119 ASSERT_THROW(o.Replace(privateTag2, std::string("hello"), false, DicomReplaceMode_ThrowIfAbsent), OrthancException);
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120 ASSERT_FALSE(o.GetTagValue(s, privateTag2));
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121 o.Replace(privateTag2, std::string("hello"), false, DicomReplaceMode_IgnoreIfAbsent);
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122 ASSERT_FALSE(o.GetTagValue(s, privateTag2));
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123 o.Replace(privateTag2, std::string("hello"), false, DicomReplaceMode_InsertIfAbsent);
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124 ASSERT_TRUE(o.GetTagValue(s, privateTag2));
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125 ASSERT_STREQ("hello", s.c_str());
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126 o.ReplacePlainString(privateTag2, "hello world");
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127 ASSERT_TRUE(o.GetTagValue(s, privateTag2));
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128 ASSERT_STREQ("hello world", s.c_str());
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129
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130 ASSERT_TRUE(o.GetTagValue(s, DICOM_TAG_PATIENT_NAME));
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131 ASSERT_FALSE(Toolbox::IsUuid(s));
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132
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133 DicomModification m;
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134 m.SetupAnonymization();
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135 m.Keep(privateTag);
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136
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137 m.Apply(o);
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138
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139 ASSERT_TRUE(o.GetTagValue(s, DICOM_TAG_PATIENT_NAME));
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140 ASSERT_TRUE(Toolbox::IsUuid(s));
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141 ASSERT_TRUE(o.GetTagValue(s, privateTag));
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142 ASSERT_STREQ("private tag", s.c_str());
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143
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144 m.SetupAnonymization();
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145 m.Apply(o);
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146 ASSERT_FALSE(o.GetTagValue(s, privateTag));
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147 }
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148
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149
802
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150 #include <dcmtk/dcmdata/dcuid.h>
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151
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152 TEST(DicomModification, Png)
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153 {
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154 // Red dot in http://en.wikipedia.org/wiki/Data_URI_scheme (RGBA image)
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155 std::string s = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg==";
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156
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157 std::string m, cc;
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158 ASSERT_TRUE(Toolbox::DecodeDataUriScheme(m, cc, s));
800
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159
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160 ASSERT_EQ("image/png", m);
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161
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162 PngReader reader;
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163 reader.ReadFromMemory(cc);
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164
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165 ASSERT_EQ(5u, reader.GetHeight());
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166 ASSERT_EQ(5u, reader.GetWidth());
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167 ASSERT_EQ(PixelFormat_RGBA32, reader.GetFormat());
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168
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169 ParsedDicomFile o(true);
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170 o.EmbedContent(s);
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171 o.SaveToFile("UnitTestsResults/png1.dcm");
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172
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173 // Red dot, without alpha channel
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174 s = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAIAAAACDbGyAAAACXBIWXMAAAsTAAALEwEAmpwYAAAAB3RJTUUH3gUGDTcIn2+8BgAAACJJREFUCNdj/P//PwMjIwME/P/P+J8BBTAxEOL/R9Lx/z8AynoKAXOeiV8AAAAASUVORK5CYII=";
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175 o.EmbedContent(s);
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176 o.SaveToFile("UnitTestsResults/png2.dcm");
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177
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178 // Check box in Graylevel8
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179 s = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAABAAAAAQCAAAAAA6mKC9AAAACXBIWXMAAAsTAAALEwEAmpwYAAAAB3RJTUUH3gUGDDcB53FulQAAAElJREFUGNNtj0sSAEEEQ1+U+185s1CtmRkblQ9CZldsKHJDk6DLGLJa6chjh0ooQmpjXMM86zPwydGEj6Ed/UGykkEM8X+p3u8/8LcOJIWLGeMAAAAASUVORK5CYII=";
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180 o.EmbedContent(s);
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181 //o.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, UID_DigitalXRayImageStorageForProcessing);
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182 o.SaveToFile("UnitTestsResults/png3.dcm");
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183
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184
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185 {
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186 // Gradient in Graylevel16
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187
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188 ImageBuffer img;
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189 img.SetWidth(256);
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190 img.SetHeight(256);
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191 img.SetFormat(PixelFormat_Grayscale16);
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192
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193 uint16_t v = 0;
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194 for (unsigned int y = 0; y < img.GetHeight(); y++)
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195 {
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196 uint16_t *p = reinterpret_cast<uint16_t*>(img.GetAccessor().GetRow(y));
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197 for (unsigned int x = 0; x < img.GetWidth(); x++, p++, v++)
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198 {
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199 *p = v;
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200 }
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201 }
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202
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203 o.EmbedImage(img.GetAccessor());
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204 o.SaveToFile("UnitTestsResults/png4.dcm");
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205 }
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206 }
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207
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208
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209 TEST(FromDcmtkBridge, Encodings1)
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210 {
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211 for (unsigned int i = 0; i < testEncodingsCount; i++)
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212 {
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213 std::string source(testEncodingsEncoded[i]);
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214 std::string expected(testEncodingsExpected[i]);
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215 std::string s = Toolbox::ConvertToUtf8(source, testEncodings[i]);
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216 //std::cout << EnumerationToString(testEncodings[i]) << std::endl;
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217 EXPECT_EQ(expected, s);
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218 }
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219 }
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220
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221
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222 TEST(FromDcmtkBridge, Enumerations)
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223 {
1908
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224 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#sect_C.12.1.1.2
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225 Encoding e;
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226
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227 ASSERT_FALSE(GetDicomEncoding(e, ""));
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228 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 6")); ASSERT_EQ(Encoding_Utf8, e);
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229
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230 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-2
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231 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 100")); ASSERT_EQ(Encoding_Latin1, e);
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232 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 101")); ASSERT_EQ(Encoding_Latin2, e);
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233 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 109")); ASSERT_EQ(Encoding_Latin3, e);
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234 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 110")); ASSERT_EQ(Encoding_Latin4, e);
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235 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 144")); ASSERT_EQ(Encoding_Cyrillic, e);
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236 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 127")); ASSERT_EQ(Encoding_Arabic, e);
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237 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 126")); ASSERT_EQ(Encoding_Greek, e);
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238 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 138")); ASSERT_EQ(Encoding_Hebrew, e);
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239 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 148")); ASSERT_EQ(Encoding_Latin5, e);
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240 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 13")); ASSERT_EQ(Encoding_Japanese, e);
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241 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 166")); ASSERT_EQ(Encoding_Thai, e);
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242
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243 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-3
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244 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 6")); ASSERT_EQ(Encoding_Utf8, e);
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245 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 100")); ASSERT_EQ(Encoding_Latin1, e);
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246 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 101")); ASSERT_EQ(Encoding_Latin2, e);
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247 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 109")); ASSERT_EQ(Encoding_Latin3, e);
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248 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 110")); ASSERT_EQ(Encoding_Latin4, e);
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249 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 144")); ASSERT_EQ(Encoding_Cyrillic, e);
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250 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 127")); ASSERT_EQ(Encoding_Arabic, e);
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251 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 126")); ASSERT_EQ(Encoding_Greek, e);
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252 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 138")); ASSERT_EQ(Encoding_Hebrew, e);
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253 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 148")); ASSERT_EQ(Encoding_Latin5, e);
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254 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 13")); ASSERT_EQ(Encoding_Japanese, e);
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255 ASSERT_TRUE(GetDicomEncoding(e, "ISO 2022 IR 166")); ASSERT_EQ(Encoding_Thai, e);
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256
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257 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-4
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258 ASSERT_FALSE(GetDicomEncoding(e, "ISO 2022 IR 87")); //ASSERT_EQ(Encoding_JapaneseKanji, e);
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259 ASSERT_FALSE(GetDicomEncoding(e, "ISO 2022 IR 159")); //ASSERT_EQ(Encoding_JapaneseKanjiSupplementary, e);
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260 ASSERT_FALSE(GetDicomEncoding(e, "ISO 2022 IR 149")); //ASSERT_EQ(Encoding_Korean, e);
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261
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262 // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#table_C.12-5
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263 ASSERT_TRUE(GetDicomEncoding(e, "ISO_IR 192")); ASSERT_EQ(Encoding_Utf8, e);
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264 ASSERT_TRUE(GetDicomEncoding(e, "GB18030")); ASSERT_EQ(Encoding_Chinese, e);
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265 }
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266
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267
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268 TEST(FromDcmtkBridge, Encodings3)
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269 {
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270 for (unsigned int i = 0; i < testEncodingsCount; i++)
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271 {
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272 //std::cout << EnumerationToString(testEncodings[i]) << std::endl;
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273 std::string dicom;
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274
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275 {
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276 ParsedDicomFile f(true);
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277 f.SetEncoding(testEncodings[i]);
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278
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279 std::string s = Toolbox::ConvertToUtf8(testEncodingsEncoded[i], testEncodings[i]);
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280 f.Insert(DICOM_TAG_PATIENT_NAME, s, false);
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281 f.SaveToMemoryBuffer(dicom);
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282 }
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283
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284 if (testEncodings[i] != Encoding_Windows1251)
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285 {
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286 ParsedDicomFile g(dicom);
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287
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288 if (testEncodings[i] != Encoding_Ascii)
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289 {
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290 ASSERT_EQ(testEncodings[i], g.GetEncoding());
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291 }
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292
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diff changeset
293 std::string tag;
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294 ASSERT_TRUE(g.GetTagValue(tag, DICOM_TAG_PATIENT_NAME));
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295 ASSERT_EQ(std::string(testEncodingsExpected[i]), tag);
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296 }
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297 }
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298 }
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299
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300
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diff changeset
301 TEST(FromDcmtkBridge, ValueRepresentation)
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302 {
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
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diff changeset
303 ASSERT_EQ(ValueRepresentation_PersonName,
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diff changeset
304 FromDcmtkBridge::LookupValueRepresentation(DICOM_TAG_PATIENT_NAME));
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diff changeset
305 ASSERT_EQ(ValueRepresentation_Date,
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diff changeset
306 FromDcmtkBridge::LookupValueRepresentation(DicomTag(0x0008, 0x0020) /* StudyDate */));
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diff changeset
307 ASSERT_EQ(ValueRepresentation_Time,
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diff changeset
308 FromDcmtkBridge::LookupValueRepresentation(DicomTag(0x0008, 0x0030) /* StudyTime */));
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diff changeset
309 ASSERT_EQ(ValueRepresentation_DateTime,
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diff changeset
310 FromDcmtkBridge::LookupValueRepresentation(DicomTag(0x0008, 0x002a) /* AcquisitionDateTime */));
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diff changeset
311 ASSERT_EQ(ValueRepresentation_NotSupported,
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diff changeset
312 FromDcmtkBridge::LookupValueRepresentation(DicomTag(0x0001, 0x0001) /* some private tag */));
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313 }
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314
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315
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diff changeset
316 TEST(FromDcmtkBridge, ValueRepresentationConversions)
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diff changeset
317 {
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diff changeset
318 ASSERT_EQ(1, ValueRepresentation_ApplicationEntity);
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319 ASSERT_EQ(1, OrthancPluginValueRepresentation_AE);
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diff changeset
320
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diff changeset
321 for (int i = ValueRepresentation_ApplicationEntity;
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diff changeset
322 i <= ValueRepresentation_NotSupported; i++)
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diff changeset
323 {
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diff changeset
324 ValueRepresentation vr = static_cast<ValueRepresentation>(i);
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325
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diff changeset
326 if (vr == ValueRepresentation_NotSupported)
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diff changeset
327 {
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diff changeset
328 ASSERT_THROW(ToDcmtkBridge::Convert(vr), OrthancException);
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diff changeset
329 ASSERT_THROW(Plugins::Convert(vr), OrthancException);
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diff changeset
330 }
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diff changeset
331 else if (vr == ValueRepresentation_OtherDouble ||
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diff changeset
332 vr == ValueRepresentation_OtherLong ||
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diff changeset
333 vr == ValueRepresentation_UniversalResource ||
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diff changeset
334 vr == ValueRepresentation_UnlimitedCharacters)
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diff changeset
335 {
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diff changeset
336 // These VR are not supported as of DCMTK 3.6.0
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diff changeset
337 ASSERT_THROW(ToDcmtkBridge::Convert(vr), OrthancException);
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diff changeset
338 ASSERT_EQ(OrthancPluginValueRepresentation_UN, Plugins::Convert(vr));
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diff changeset
339 }
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diff changeset
340 else
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diff changeset
341 {
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diff changeset
342 ASSERT_EQ(vr, FromDcmtkBridge::Convert(ToDcmtkBridge::Convert(vr)));
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diff changeset
343
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diff changeset
344 OrthancPluginValueRepresentation plugins = Plugins::Convert(vr);
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diff changeset
345 ASSERT_EQ(vr, Plugins::Convert(plugins));
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346 }
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diff changeset
347 }
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diff changeset
348
6301bbcbcaed more generic support of value representations
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diff changeset
349 for (int i = OrthancPluginValueRepresentation_AE;
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diff changeset
350 i <= OrthancPluginValueRepresentation_UT; i++)
6301bbcbcaed more generic support of value representations
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diff changeset
351 {
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diff changeset
352 OrthancPluginValueRepresentation plugins = static_cast<OrthancPluginValueRepresentation>(i);
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diff changeset
353 ValueRepresentation orthanc = Plugins::Convert(plugins);
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diff changeset
354 ASSERT_EQ(plugins, Plugins::Convert(orthanc));
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diff changeset
355 }
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diff changeset
356 }
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ae09132e4237 FromJson
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diff changeset
357
ae09132e4237 FromJson
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diff changeset
358
1693
558b25228a23 creation of tag hierarchy from json
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diff changeset
359
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diff changeset
360 static const DicomTag REFERENCED_STUDY_SEQUENCE(0x0008, 0x1110);
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diff changeset
361 static const DicomTag REFERENCED_PATIENT_SEQUENCE(0x0008, 0x1120);
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diff changeset
362
558b25228a23 creation of tag hierarchy from json
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diff changeset
363 static void CreateSampleJson(Json::Value& a)
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364 {
558b25228a23 creation of tag hierarchy from json
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diff changeset
365 {
558b25228a23 creation of tag hierarchy from json
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366 Json::Value b = Json::objectValue;
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367 b["PatientName"] = "Hello";
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368 b["PatientID"] = "World";
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diff changeset
369 b["StudyDescription"] = "Toto";
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diff changeset
370 a.append(b);
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diff changeset
371 }
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parents: 1692
diff changeset
372
558b25228a23 creation of tag hierarchy from json
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diff changeset
373 {
558b25228a23 creation of tag hierarchy from json
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diff changeset
374 Json::Value b = Json::objectValue;
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diff changeset
375 b["PatientName"] = "data:application/octet-stream;base64,SGVsbG8y"; // echo -n "Hello2" | base64
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diff changeset
376 b["PatientID"] = "World2";
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diff changeset
377 a.append(b);
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diff changeset
378 }
558b25228a23 creation of tag hierarchy from json
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diff changeset
379 }
558b25228a23 creation of tag hierarchy from json
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parents: 1692
diff changeset
380
558b25228a23 creation of tag hierarchy from json
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parents: 1692
diff changeset
381
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diff changeset
382 namespace Orthanc
1690
ae09132e4237 FromJson
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diff changeset
383 {
2126
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diff changeset
384 // Namespace for the "FRIEND_TEST()" directive in "FromDcmtkBridge" to apply:
03b065778fc3 cleaning up
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parents: 2120
diff changeset
385 // https://github.com/google/googletest/blob/master/googletest/docs/AdvancedGuide.md#private-class-members
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parents: 2120
diff changeset
386 TEST(FromDcmtkBridge, FromJson)
1690
ae09132e4237 FromJson
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parents: 1654
diff changeset
387 {
2126
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diff changeset
388 std::auto_ptr<DcmElement> element;
1690
ae09132e4237 FromJson
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parents: 1654
diff changeset
389
ae09132e4237 FromJson
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parents: 1654
diff changeset
390 {
2126
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parents: 2120
diff changeset
391 Json::Value a;
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parents: 2120
diff changeset
392 a = "Hello";
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parents: 2120
diff changeset
393 element.reset(FromDcmtkBridge::FromJson(DICOM_TAG_PATIENT_NAME, a, false, Encoding_Utf8));
03b065778fc3 cleaning up
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parents: 2120
diff changeset
394
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ae09132e4237 FromJson
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parents: 1654
diff changeset
395 Json::Value b;
2126
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diff changeset
396 FromDcmtkBridge::ElementToJson(b, *element, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0, Encoding_Ascii);
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parents: 2120
diff changeset
397 ASSERT_EQ("Hello", b["0010,0010"].asString());
03b065778fc3 cleaning up
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parents: 2120
diff changeset
398 }
1690
ae09132e4237 FromJson
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parents: 1654
diff changeset
399
2126
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parents: 2120
diff changeset
400 {
03b065778fc3 cleaning up
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parents: 2120
diff changeset
401 Json::Value a;
03b065778fc3 cleaning up
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parents: 2120
diff changeset
402 a = "Hello";
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parents: 2120
diff changeset
403 // Cannot assign a string to a sequence
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parents: 2120
diff changeset
404 ASSERT_THROW(element.reset(FromDcmtkBridge::FromJson(REFERENCED_STUDY_SEQUENCE, a, false, Encoding_Utf8)), OrthancException);
03b065778fc3 cleaning up
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parents: 2120
diff changeset
405 }
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
406
03b065778fc3 cleaning up
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parents: 2120
diff changeset
407 {
03b065778fc3 cleaning up
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parents: 2120
diff changeset
408 Json::Value a = Json::arrayValue;
03b065778fc3 cleaning up
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parents: 2120
diff changeset
409 a.append("Hello");
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
410 // Cannot assign an array to a string
03b065778fc3 cleaning up
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parents: 2120
diff changeset
411 ASSERT_THROW(element.reset(FromDcmtkBridge::FromJson(DICOM_TAG_PATIENT_NAME, a, false, Encoding_Utf8)), OrthancException);
1690
ae09132e4237 FromJson
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parents: 1654
diff changeset
412 }
ae09132e4237 FromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1654
diff changeset
413
1692
4eaf164dd574 test SimplifyTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1691
diff changeset
414 {
2126
03b065778fc3 cleaning up
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parents: 2120
diff changeset
415 Json::Value a;
03b065778fc3 cleaning up
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parents: 2120
diff changeset
416 a = "data:application/octet-stream;base64,SGVsbG8="; // echo -n "Hello" | base64
03b065778fc3 cleaning up
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parents: 2120
diff changeset
417 element.reset(FromDcmtkBridge::FromJson(DICOM_TAG_PATIENT_NAME, a, true, Encoding_Utf8));
03b065778fc3 cleaning up
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parents: 2120
diff changeset
418
1692
4eaf164dd574 test SimplifyTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1691
diff changeset
419 Json::Value b;
2126
03b065778fc3 cleaning up
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parents: 2120
diff changeset
420 FromDcmtkBridge::ElementToJson(b, *element, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0, Encoding_Ascii);
03b065778fc3 cleaning up
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parents: 2120
diff changeset
421 ASSERT_EQ("Hello", b["0010,0010"].asString());
03b065778fc3 cleaning up
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parents: 2120
diff changeset
422 }
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
423
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
424 {
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
425 Json::Value a = Json::arrayValue;
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
426 CreateSampleJson(a);
03b065778fc3 cleaning up
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parents: 2120
diff changeset
427 element.reset(FromDcmtkBridge::FromJson(REFERENCED_STUDY_SEQUENCE, a, true, Encoding_Utf8));
1690
ae09132e4237 FromJson
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parents: 1654
diff changeset
428
2126
03b065778fc3 cleaning up
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parents: 2120
diff changeset
429 {
03b065778fc3 cleaning up
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parents: 2120
diff changeset
430 Json::Value b;
03b065778fc3 cleaning up
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parents: 2120
diff changeset
431 FromDcmtkBridge::ElementToJson(b, *element, DicomToJsonFormat_Short, DicomToJsonFlags_Default, 0, Encoding_Ascii);
03b065778fc3 cleaning up
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parents: 2120
diff changeset
432 ASSERT_EQ(Json::arrayValue, b["0008,1110"].type());
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parents: 2120
diff changeset
433 ASSERT_EQ(2u, b["0008,1110"].size());
03b065778fc3 cleaning up
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parents: 2120
diff changeset
434
03b065778fc3 cleaning up
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parents: 2120
diff changeset
435 Json::Value::ArrayIndex i = (b["0008,1110"][0]["0010,0010"].asString() == "Hello") ? 0 : 1;
1690
ae09132e4237 FromJson
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parents: 1654
diff changeset
436
2126
03b065778fc3 cleaning up
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parents: 2120
diff changeset
437 ASSERT_EQ(3u, b["0008,1110"][i].size());
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
438 ASSERT_EQ(2u, b["0008,1110"][1 - i].size());
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
439 ASSERT_EQ(b["0008,1110"][i]["0010,0010"].asString(), "Hello");
03b065778fc3 cleaning up
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parents: 2120
diff changeset
440 ASSERT_EQ(b["0008,1110"][i]["0010,0020"].asString(), "World");
03b065778fc3 cleaning up
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parents: 2120
diff changeset
441 ASSERT_EQ(b["0008,1110"][i]["0008,1030"].asString(), "Toto");
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
442 ASSERT_EQ(b["0008,1110"][1 - i]["0010,0010"].asString(), "Hello2");
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
443 ASSERT_EQ(b["0008,1110"][1 - i]["0010,0020"].asString(), "World2");
03b065778fc3 cleaning up
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parents: 2120
diff changeset
444 }
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parents: 2120
diff changeset
445
03b065778fc3 cleaning up
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parents: 2120
diff changeset
446 {
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parents: 2120
diff changeset
447 Json::Value b;
03b065778fc3 cleaning up
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parents: 2120
diff changeset
448 FromDcmtkBridge::ElementToJson(b, *element, DicomToJsonFormat_Full, DicomToJsonFlags_Default, 0, Encoding_Ascii);
03b065778fc3 cleaning up
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parents: 2120
diff changeset
449
03b065778fc3 cleaning up
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parents: 2120
diff changeset
450 Json::Value c;
03b065778fc3 cleaning up
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parents: 2120
diff changeset
451 ServerToolbox::SimplifyTags(c, b, DicomToJsonFormat_Human);
03b065778fc3 cleaning up
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parents: 2120
diff changeset
452
03b065778fc3 cleaning up
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parents: 2120
diff changeset
453 a[1]["PatientName"] = "Hello2"; // To remove the Data URI Scheme encoding
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parents: 2120
diff changeset
454 ASSERT_EQ(0, c["ReferencedStudySequence"].compare(a));
03b065778fc3 cleaning up
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2120
diff changeset
455 }
1692
4eaf164dd574 test SimplifyTags
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parents: 1691
diff changeset
456 }
4eaf164dd574 test SimplifyTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1691
diff changeset
457 }
1690
ae09132e4237 FromJson
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parents: 1654
diff changeset
458 }
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
459
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
460
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
461 TEST(ParsedDicomFile, InsertReplaceStrings)
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
462 {
1805
f08978b1f45b c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1789
diff changeset
463 ParsedDicomFile f(true);
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
464
1699
8ca0e89798b2 "/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
465 f.Insert(DICOM_TAG_PATIENT_NAME, "World", false);
8ca0e89798b2 "/modify" can insert/modify sequences
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1695
diff changeset
466 ASSERT_THROW(f.Insert(DICOM_TAG_PATIENT_ID, "Hello", false), OrthancException); // Already existing tag
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
467 f.ReplacePlainString(DICOM_TAG_SOP_INSTANCE_UID, "Toto"); // (*)
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
468 f.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, "Tata"); // (**)
1693
558b25228a23 creation of tag hierarchy from json
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parents: 1692
diff changeset
469
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
470 std::string s;
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
471
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
472 ASSERT_THROW(f.Replace(DICOM_TAG_ACCESSION_NUMBER, std::string("Accession"),
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
473 false, DicomReplaceMode_ThrowIfAbsent), OrthancException);
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
474 f.Replace(DICOM_TAG_ACCESSION_NUMBER, std::string("Accession"), false, DicomReplaceMode_IgnoreIfAbsent);
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
475 ASSERT_FALSE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER));
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
476 f.Replace(DICOM_TAG_ACCESSION_NUMBER, std::string("Accession"), false, DicomReplaceMode_InsertIfAbsent);
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
477 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
478 ASSERT_EQ(s, "Accession");
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
479 f.Replace(DICOM_TAG_ACCESSION_NUMBER, std::string("Accession2"), false, DicomReplaceMode_IgnoreIfAbsent);
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
480 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
481 ASSERT_EQ(s, "Accession2");
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
482 f.Replace(DICOM_TAG_ACCESSION_NUMBER, std::string("Accession3"), false, DicomReplaceMode_ThrowIfAbsent);
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
483 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_ACCESSION_NUMBER));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
484 ASSERT_EQ(s, "Accession3");
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
485
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
486 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_PATIENT_NAME));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
487 ASSERT_EQ(s, "World");
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
488 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_INSTANCE_UID));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
489 ASSERT_EQ(s, "Toto");
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
490 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_INSTANCE_UID)); // Implicitly modified by (*)
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
491 ASSERT_EQ(s, "Toto");
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
492 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_CLASS_UID));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
493 ASSERT_EQ(s, "Tata");
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
494 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_CLASS_UID)); // Implicitly modified by (**)
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
495 ASSERT_EQ(s, "Tata");
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
496 }
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
497
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
498
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
499
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
500
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
501 TEST(ParsedDicomFile, InsertReplaceJson)
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
502 {
1805
f08978b1f45b c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1789
diff changeset
503 ParsedDicomFile f(true);
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
504
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
505 Json::Value a;
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
506 CreateSampleJson(a);
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
507
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
508 ASSERT_FALSE(f.HasTag(REFERENCED_STUDY_SEQUENCE));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
509 f.Remove(REFERENCED_STUDY_SEQUENCE); // No effect
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
510 f.Insert(REFERENCED_STUDY_SEQUENCE, a, true);
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
511 ASSERT_TRUE(f.HasTag(REFERENCED_STUDY_SEQUENCE));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
512 ASSERT_THROW(f.Insert(REFERENCED_STUDY_SEQUENCE, a, true), OrthancException);
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
513 f.Remove(REFERENCED_STUDY_SEQUENCE);
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
514 ASSERT_FALSE(f.HasTag(REFERENCED_STUDY_SEQUENCE));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
515 f.Insert(REFERENCED_STUDY_SEQUENCE, a, true);
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
516 ASSERT_TRUE(f.HasTag(REFERENCED_STUDY_SEQUENCE));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
517
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
518 ASSERT_FALSE(f.HasTag(REFERENCED_PATIENT_SEQUENCE));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
519 ASSERT_THROW(f.Replace(REFERENCED_PATIENT_SEQUENCE, a, false, DicomReplaceMode_ThrowIfAbsent), OrthancException);
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
520 ASSERT_FALSE(f.HasTag(REFERENCED_PATIENT_SEQUENCE));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
521 f.Replace(REFERENCED_PATIENT_SEQUENCE, a, false, DicomReplaceMode_IgnoreIfAbsent);
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
522 ASSERT_FALSE(f.HasTag(REFERENCED_PATIENT_SEQUENCE));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
523 f.Replace(REFERENCED_PATIENT_SEQUENCE, a, false, DicomReplaceMode_InsertIfAbsent);
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
524 ASSERT_TRUE(f.HasTag(REFERENCED_PATIENT_SEQUENCE));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
525
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
526 {
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
527 Json::Value b;
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
528 f.DatasetToJson(b, DicomToJsonFormat_Full, DicomToJsonFlags_Default, 0);
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
529
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
530 Json::Value c;
2120
4b02ec79728a refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2117
diff changeset
531 ServerToolbox::SimplifyTags(c, b, DicomToJsonFormat_Human);
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
532
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
533 ASSERT_EQ(0, c["ReferencedPatientSequence"].compare(a));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
534 ASSERT_NE(0, c["ReferencedStudySequence"].compare(a)); // Because Data URI Scheme decoding was enabled
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
535 }
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
536
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
537 a = "data:application/octet-stream;base64,VGF0YQ=="; // echo -n "Tata" | base64
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
538 f.Replace(DICOM_TAG_SOP_INSTANCE_UID, a, false, DicomReplaceMode_InsertIfAbsent); // (*)
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
539 f.Replace(DICOM_TAG_SOP_CLASS_UID, a, true, DicomReplaceMode_InsertIfAbsent); // (**)
1693
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
540
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
541 std::string s;
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
542 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_INSTANCE_UID));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
543 ASSERT_EQ(s, a.asString());
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
544 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_INSTANCE_UID)); // Implicitly modified by (*)
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
545 ASSERT_EQ(s, a.asString());
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
546 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_SOP_CLASS_UID));
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
547 ASSERT_EQ(s, "Tata");
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
548 ASSERT_TRUE(f.GetTagValue(s, DICOM_TAG_MEDIA_STORAGE_SOP_CLASS_UID)); // Implicitly modified by (**)
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
549 ASSERT_EQ(s, "Tata");
558b25228a23 creation of tag hierarchy from json
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1692
diff changeset
550 }
1695
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
551
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
552
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
553 TEST(ParsedDicomFile, JsonEncoding)
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
554 {
1805
f08978b1f45b c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1789
diff changeset
555 ParsedDicomFile f(true);
1695
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
556
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
557 for (unsigned int i = 0; i < testEncodingsCount; i++)
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
558 {
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
559 if (testEncodings[i] != Encoding_Windows1251)
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
560 {
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
561 //std::cout << EnumerationToString(testEncodings[i]) << std::endl;
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
562 f.SetEncoding(testEncodings[i]);
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
563
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
564 if (testEncodings[i] != Encoding_Ascii)
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
565 {
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
566 ASSERT_EQ(testEncodings[i], f.GetEncoding());
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
567 }
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
568
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
569 Json::Value s = Toolbox::ConvertToUtf8(testEncodingsEncoded[i], testEncodings[i]);
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
570 f.Replace(DICOM_TAG_PATIENT_NAME, s, false, DicomReplaceMode_InsertIfAbsent);
1695
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
571
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
572 Json::Value v;
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
573 f.DatasetToJson(v, DicomToJsonFormat_Human, DicomToJsonFlags_Default, 0);
1695
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
574 ASSERT_EQ(v["PatientName"].asString(), std::string(testEncodingsExpected[i]));
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
575 }
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
576 }
18c02c6987d5 fix for encodings
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1693
diff changeset
577 }
1735
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
578
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
579
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
580 TEST(ParsedDicomFile, ToJsonFlags1)
1735
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
581 {
2115
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2107
diff changeset
582 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7053, 0x1000), ValueRepresentation_PersonName, "MyPrivateTag", 1, 1, "");
a657f7772e69 Handling of private tags/creators in the "Dictionary" configuration option
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2107
diff changeset
583 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7050, 0x1000), ValueRepresentation_PersonName, "Declared public tag", 1, 1, "");
1736
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
584
1805
f08978b1f45b c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1789
diff changeset
585 ParsedDicomFile f(true);
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
586 f.Insert(DicomTag(0x7050, 0x1000), "Some public tag", false); // Even group => public tag
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
587 f.Insert(DicomTag(0x7052, 0x1000), "Some unknown tag", false); // Even group => public, unknown tag
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
588 f.Insert(DicomTag(0x7053, 0x1000), "Some private tag", false); // Odd group => private tag
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
589
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
590 Json::Value v;
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
591 f.DatasetToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_None, 0);
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
592 ASSERT_EQ(Json::objectValue, v.type());
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
593 ASSERT_EQ(6u, v.getMemberNames().size());
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
594 ASSERT_FALSE(v.isMember("7052,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
595 ASSERT_FALSE(v.isMember("7053,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
596 ASSERT_TRUE(v.isMember("7050,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
597 ASSERT_EQ(Json::stringValue, v["7050,1000"].type());
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
598 ASSERT_EQ("Some public tag", v["7050,1000"].asString());
1735
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
599
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
600 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePrivateTags | DicomToJsonFlags_ConvertBinaryToNull), 0);
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
601 ASSERT_EQ(Json::objectValue, v.type());
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
602 ASSERT_EQ(7u, v.getMemberNames().size());
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
603 ASSERT_FALSE(v.isMember("7052,1000"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
604 ASSERT_TRUE(v.isMember("7050,1000"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
605 ASSERT_TRUE(v.isMember("7053,1000"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
606 ASSERT_EQ("Some public tag", v["7050,1000"].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
607 ASSERT_EQ(Json::nullValue, v["7053,1000"].type());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
608
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
609 f.DatasetToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_IncludePrivateTags, 0);
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
610 ASSERT_EQ(Json::objectValue, v.type());
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
611 ASSERT_EQ(7u, v.getMemberNames().size());
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
612 ASSERT_FALSE(v.isMember("7052,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
613 ASSERT_TRUE(v.isMember("7050,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
614 ASSERT_TRUE(v.isMember("7053,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
615 ASSERT_EQ("Some public tag", v["7050,1000"].asString());
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
616 std::string mime, content;
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
617 ASSERT_EQ(Json::stringValue, v["7053,1000"].type());
1981
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1971
diff changeset
618 ASSERT_TRUE(Toolbox::DecodeDataUriScheme(mime, content, v["7053,1000"].asString()));
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
619 ASSERT_EQ("application/octet-stream", mime);
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
620 ASSERT_EQ("Some private tag", content);
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
621
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
622 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeUnknownTags | DicomToJsonFlags_ConvertBinaryToNull), 0);
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
623 ASSERT_EQ(Json::objectValue, v.type());
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
624 ASSERT_EQ(7u, v.getMemberNames().size());
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
625 ASSERT_TRUE(v.isMember("7050,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
626 ASSERT_TRUE(v.isMember("7052,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
627 ASSERT_FALSE(v.isMember("7053,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
628 ASSERT_EQ("Some public tag", v["7050,1000"].asString());
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
629 ASSERT_EQ(Json::nullValue, v["7052,1000"].type());
1735
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
630
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
631 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeUnknownTags), 0);
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
632 ASSERT_EQ(Json::objectValue, v.type());
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
633 ASSERT_EQ(7u, v.getMemberNames().size());
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
634 ASSERT_TRUE(v.isMember("7050,1000"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
635 ASSERT_TRUE(v.isMember("7052,1000"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
636 ASSERT_FALSE(v.isMember("7053,1000"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
637 ASSERT_EQ("Some public tag", v["7050,1000"].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
638 ASSERT_EQ(Json::stringValue, v["7052,1000"].type());
1981
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1971
diff changeset
639 ASSERT_TRUE(Toolbox::DecodeDataUriScheme(mime, content, v["7052,1000"].asString()));
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
640 ASSERT_EQ("application/octet-stream", mime);
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
641 ASSERT_EQ("Some unknown tag", content);
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
642
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
643 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeUnknownTags | DicomToJsonFlags_IncludePrivateTags | DicomToJsonFlags_ConvertBinaryToNull), 0);
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
644 ASSERT_EQ(Json::objectValue, v.type());
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
645 ASSERT_EQ(8u, v.getMemberNames().size());
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
646 ASSERT_TRUE(v.isMember("7050,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
647 ASSERT_TRUE(v.isMember("7052,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
648 ASSERT_TRUE(v.isMember("7053,1000"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
649 ASSERT_EQ("Some public tag", v["7050,1000"].asString());
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
650 ASSERT_EQ(Json::nullValue, v["7052,1000"].type());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
651 ASSERT_EQ(Json::nullValue, v["7053,1000"].type());
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
652 }
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
653
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
654
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
655 TEST(ParsedDicomFile, ToJsonFlags2)
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
656 {
1805
f08978b1f45b c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1789
diff changeset
657 ParsedDicomFile f(true);
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
658 f.Insert(DICOM_TAG_PIXEL_DATA, "Pixels", false);
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
659
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
660 Json::Value v;
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
661 f.DatasetToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_None, 0);
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
662 ASSERT_EQ(Json::objectValue, v.type());
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
663 ASSERT_EQ(5u, v.getMemberNames().size());
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
664 ASSERT_FALSE(v.isMember("7fe0,0010"));
1736
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
665
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
666 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePixelData | DicomToJsonFlags_ConvertBinaryToNull), 0);
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
667 ASSERT_EQ(Json::objectValue, v.type());
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
668 ASSERT_EQ(6u, v.getMemberNames().size());
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
669 ASSERT_TRUE(v.isMember("7fe0,0010"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
670 ASSERT_EQ(Json::nullValue, v["7fe0,0010"].type());
1736
b953c6eef28d ToJson: IncludePrivateTags and IncludeUnknownTags
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1735
diff changeset
671
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
672 f.DatasetToJson(v, DicomToJsonFormat_Short, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePixelData | DicomToJsonFlags_ConvertBinaryToAscii), 0);
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
673 ASSERT_EQ(Json::objectValue, v.type());
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
674 ASSERT_EQ(6u, v.getMemberNames().size());
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
675 ASSERT_TRUE(v.isMember("7fe0,0010"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
676 ASSERT_EQ(Json::stringValue, v["7fe0,0010"].type());
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
677 ASSERT_EQ("Pixels", v["7fe0,0010"].asString());
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
678
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
679 f.DatasetToJson(v, DicomToJsonFormat_Short, DicomToJsonFlags_IncludePixelData, 0);
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
680 ASSERT_EQ(Json::objectValue, v.type());
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
681 ASSERT_EQ(6u, v.getMemberNames().size());
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
682 ASSERT_TRUE(v.isMember("7fe0,0010"));
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
683 ASSERT_EQ(Json::stringValue, v["7fe0,0010"].type());
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
684 std::string mime, content;
1981
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1971
diff changeset
685 ASSERT_TRUE(Toolbox::DecodeDataUriScheme(mime, content, v["7fe0,0010"].asString()));
1739
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
686 ASSERT_EQ("application/octet-stream", mime);
df331354cea2 include binary in ToJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1736
diff changeset
687 ASSERT_EQ("Pixels", content);
1735
a001f6226c7c primitives for flags in dicom-to-json conversions
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1701
diff changeset
688 }
1787
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
689
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
690
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
691 TEST(DicomFindAnswers, Basic)
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
692 {
2059
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2007
diff changeset
693 DicomFindAnswers a(false);
1787
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
694
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
695 {
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
696 DicomMap m;
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
697 m.SetValue(DICOM_TAG_PATIENT_ID, "hello", false);
1787
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
698 a.Add(m);
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
699 }
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
700
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
701 {
1805
f08978b1f45b c-find scu for modality worklists
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1789
diff changeset
702 ParsedDicomFile d(true);
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
703 d.ReplacePlainString(DICOM_TAG_PATIENT_ID, "my");
1789
bdcc1dba4a53 optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1787
diff changeset
704 a.Add(d);
bdcc1dba4a53 optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1787
diff changeset
705 }
bdcc1dba4a53 optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1787
diff changeset
706
bdcc1dba4a53 optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1787
diff changeset
707 {
1787
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
708 DicomMap m;
2007
655489d9165d DicomMap::ParseDicomMetaInformation()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2006
diff changeset
709 m.SetValue(DICOM_TAG_PATIENT_ID, "world", false);
1787
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
710 a.Add(m);
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
711 }
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
712
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
713 Json::Value j;
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
714 a.ToJson(j, true);
1789
bdcc1dba4a53 optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1787
diff changeset
715 ASSERT_EQ(3u, j.size());
bdcc1dba4a53 optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1787
diff changeset
716
bdcc1dba4a53 optimization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1787
diff changeset
717 //std::cout << j;
1787
1b1d5470233f refactoring of DicomFindAnswers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1739
diff changeset
718 }
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
719
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
720
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
721 TEST(ParsedDicomFile, FromJson)
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
722 {
2117
87b395a77c41 fix unit test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
723 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7057, 0x1000), ValueRepresentation_OtherByte, "MyPrivateTag2", 1, 1, "ORTHANC");
87b395a77c41 fix unit test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
724 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7059, 0x1000), ValueRepresentation_OtherByte, "MyPrivateTag3", 1, 1, "");
87b395a77c41 fix unit test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
725 FromDcmtkBridge::RegisterDictionaryTag(DicomTag(0x7050, 0x1000), ValueRepresentation_PersonName, "Declared public tag2", 1, 1, "");
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
726
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
727 Json::Value v;
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
728 const std::string sopClassUid = "1.2.840.10008.5.1.4.1.1.1"; // CR Image Storage:
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
729
2117
87b395a77c41 fix unit test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
730 // Test the private creator
87b395a77c41 fix unit test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
731 ASSERT_EQ(DcmTag_ERROR_TagName, FromDcmtkBridge::GetTagName(DicomTag(0x7057, 0x1000), "NOPE"));
87b395a77c41 fix unit test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
732 ASSERT_EQ("MyPrivateTag2", FromDcmtkBridge::GetTagName(DicomTag(0x7057, 0x1000), "ORTHANC"));
87b395a77c41 fix unit test
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2115
diff changeset
733
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
734 {
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
735 v["SOPClassUID"] = sopClassUid;
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
736 v["SpecificCharacterSet"] = "ISO_IR 148"; // This is latin-5
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
737 v["PatientName"] = "Sébastien";
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
738 v["7050-1000"] = "Some public tag"; // Even group => public tag
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
739 v["7052-1000"] = "Some unknown tag"; // Even group => public, unknown tag
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
740 v["7057-1000"] = "Some private tag"; // Odd group => private tag
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
741 v["7059-1000"] = "Some private tag2"; // Odd group => private tag, with an odd length to test padding
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
742
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
743 std::string s;
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
744 Toolbox::EncodeDataUriScheme(s, "application/octet-stream", "Sebastien");
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
745 v["StudyDescription"] = s;
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
746
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
747 v["PixelData"] = "data:image/png;base64,iVBORw0KGgoAAAANSUhEUgAAAAUAAAAFCAYAAACNbyblAAAAHElEQVQI12P4//8/w38GIAXDIBKE0DHxgljNBAAO9TXL0Y4OHwAAAABJRU5ErkJggg=="; // A red dot of 5x5 pixels
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
748 v["0040,0100"] = Json::arrayValue; // ScheduledProcedureStepSequence
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
749
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
750 Json::Value vv;
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
751 vv["Modality"] = "MR";
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
752 v["0040,0100"].append(vv);
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
753
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
754 vv["Modality"] = "CT";
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
755 v["0040,0100"].append(vv);
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
756 }
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
757
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
758 const DicomToJsonFlags toJsonFlags = static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludeBinary |
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
759 DicomToJsonFlags_IncludePixelData |
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
760 DicomToJsonFlags_IncludePrivateTags |
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
761 DicomToJsonFlags_IncludeUnknownTags |
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
762 DicomToJsonFlags_ConvertBinaryToAscii);
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
763
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
764
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
765 {
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
766 std::auto_ptr<ParsedDicomFile> dicom
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
767 (ParsedDicomFile::CreateFromJson(v, static_cast<DicomFromJsonFlags>(DicomFromJsonFlags_GenerateIdentifiers)));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
768
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
769 Json::Value vv;
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
770 dicom->DatasetToJson(vv, DicomToJsonFormat_Human, toJsonFlags, 0);
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
771
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
772 ASSERT_EQ(vv["SOPClassUID"].asString(), sopClassUid);
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
773 ASSERT_EQ(vv["MediaStorageSOPClassUID"].asString(), sopClassUid);
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
774 ASSERT_TRUE(vv.isMember("SOPInstanceUID"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
775 ASSERT_TRUE(vv.isMember("SeriesInstanceUID"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
776 ASSERT_TRUE(vv.isMember("StudyInstanceUID"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
777 ASSERT_TRUE(vv.isMember("PatientID"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
778 }
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
779
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
780
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
781 {
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
782 std::auto_ptr<ParsedDicomFile> dicom
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
783 (ParsedDicomFile::CreateFromJson(v, static_cast<DicomFromJsonFlags>(DicomFromJsonFlags_GenerateIdentifiers)));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
784
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
785 Json::Value vv;
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
786 dicom->DatasetToJson(vv, DicomToJsonFormat_Human, static_cast<DicomToJsonFlags>(DicomToJsonFlags_IncludePixelData), 0);
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
787
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
788 std::string mime, content;
1981
4b545a8b1f95 return code in Toolbox::DecodeDataUriScheme
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1971
diff changeset
789 ASSERT_TRUE(Toolbox::DecodeDataUriScheme(mime, content, vv["PixelData"].asString()));
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
790 ASSERT_EQ("application/octet-stream", mime);
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
791 ASSERT_EQ(5u * 5u * 3u /* the red dot is 5x5 pixels in RGB24 */ + 1 /* for padding */, content.size());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
792 }
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
793
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
794
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
795 {
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
796 std::auto_ptr<ParsedDicomFile> dicom
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
797 (ParsedDicomFile::CreateFromJson(v, static_cast<DicomFromJsonFlags>(DicomFromJsonFlags_DecodeDataUriScheme)));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
798
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
799 Json::Value vv;
2128
9329ba17a069 Possibility to DELETE "dicom-as-json" attachments to reconstruct them
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2126
diff changeset
800 dicom->DatasetToJson(vv, DicomToJsonFormat_Short, toJsonFlags, 0);
1818
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
801
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
802 ASSERT_FALSE(vv.isMember("SOPInstanceUID"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
803 ASSERT_FALSE(vv.isMember("SeriesInstanceUID"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
804 ASSERT_FALSE(vv.isMember("StudyInstanceUID"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
805 ASSERT_FALSE(vv.isMember("PatientID"));
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
806 ASSERT_EQ(2u, vv["0040,0100"].size());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
807 ASSERT_EQ("MR", vv["0040,0100"][0]["0008,0060"].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
808 ASSERT_EQ("CT", vv["0040,0100"][1]["0008,0060"].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
809 ASSERT_EQ("Some public tag", vv["7050,1000"].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
810 ASSERT_EQ("Some unknown tag", vv["7052,1000"].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
811 ASSERT_EQ("Some private tag", vv["7057,1000"].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
812 ASSERT_EQ("Some private tag2", vv["7059,1000"].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
813 ASSERT_EQ("Sébastien", vv["0010,0010"].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
814 ASSERT_EQ("Sebastien", vv["0008,1030"].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
815 ASSERT_EQ("ISO_IR 148", vv["0008,0005"].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
816 ASSERT_EQ("5", vv[DICOM_TAG_ROWS.Format()].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
817 ASSERT_EQ("5", vv[DICOM_TAG_COLUMNS.Format()].asString());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
818 ASSERT_TRUE(vv[DICOM_TAG_PIXEL_DATA.Format()].asString().empty());
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
819 }
1065401501fb ParsedDicomFile::CreateFromJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1805
diff changeset
820 }
1937
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
821
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
822
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
823
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
824 TEST(TestImages, PatternGrayscale8)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
825 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
826 static const char* PATH = "UnitTestsResults/PatternGrayscale8.dcm";
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
827
2107
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2059
diff changeset
828 Orthanc::Image image(Orthanc::PixelFormat_Grayscale8, 256, 256, false);
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
829
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
830 for (int y = 0; y < 256; y++)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
831 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
832 uint8_t *p = reinterpret_cast<uint8_t*>(image.GetRow(y));
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
833 for (int x = 0; x < 256; x++, p++)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
834 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
835 *p = y;
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
836 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
837 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
838
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
839 Orthanc::ImageAccessor r = image.GetRegion(32, 32, 64, 192);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
840 Orthanc::ImageProcessing::Set(r, 0);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
841 r = image.GetRegion(160, 32, 64, 192);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
842 Orthanc::ImageProcessing::Set(r, 255);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
843
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
844 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
845 ParsedDicomFile f(true);
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
846 f.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
847 f.ReplacePlainString(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
848 f.ReplacePlainString(DICOM_TAG_PATIENT_ID, "ORTHANC");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
849 f.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "Orthanc");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
850 f.ReplacePlainString(DICOM_TAG_STUDY_DESCRIPTION, "Patterns");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
851 f.ReplacePlainString(DICOM_TAG_SERIES_DESCRIPTION, "Grayscale8");
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
852 f.EmbedImage(image);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
853
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
854 f.SaveToFile(PATH);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
855 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
856
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
857 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
858 std::string s;
2140
aa4b8895cd23 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2128
diff changeset
859 Orthanc::SystemToolbox::ReadFile(s, PATH);
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
860 Orthanc::ParsedDicomFile f(s);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
861
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
862 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0));
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
863 ASSERT_EQ(256u, decoded->GetWidth());
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
864 ASSERT_EQ(256u, decoded->GetHeight());
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
865 ASSERT_EQ(Orthanc::PixelFormat_Grayscale8, decoded->GetFormat());
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
866
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
867 for (int y = 0; y < 256; y++)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
868 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
869 const void* a = image.GetConstRow(y);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
870 const void* b = decoded->GetConstRow(y);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
871 ASSERT_EQ(0, memcmp(a, b, 256));
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
872 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
873 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
874 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
875
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
876
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
877 TEST(TestImages, PatternRGB)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
878 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
879 static const char* PATH = "UnitTestsResults/PatternRGB24.dcm";
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
880
2107
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2059
diff changeset
881 Orthanc::Image image(Orthanc::PixelFormat_RGB24, 384, 256, false);
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
882
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
883 for (int y = 0; y < 256; y++)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
884 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
885 uint8_t *p = reinterpret_cast<uint8_t*>(image.GetRow(y));
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
886 for (int x = 0; x < 128; x++, p += 3)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
887 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
888 p[0] = y;
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
889 p[1] = 0;
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
890 p[2] = 0;
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
891 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
892 for (int x = 128; x < 128 * 2; x++, p += 3)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
893 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
894 p[0] = 0;
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
895 p[1] = 255 - y;
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
896 p[2] = 0;
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
897 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
898 for (int x = 128 * 2; x < 128 * 3; x++, p += 3)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
899 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
900 p[0] = 0;
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
901 p[1] = 0;
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
902 p[2] = y;
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
903 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
904 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
905
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
906 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
907 ParsedDicomFile f(true);
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
908 f.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
909 f.ReplacePlainString(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
910 f.ReplacePlainString(DICOM_TAG_PATIENT_ID, "ORTHANC");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
911 f.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "Orthanc");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
912 f.ReplacePlainString(DICOM_TAG_STUDY_DESCRIPTION, "Patterns");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
913 f.ReplacePlainString(DICOM_TAG_SERIES_DESCRIPTION, "RGB24");
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
914 f.EmbedImage(image);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
915
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
916 f.SaveToFile(PATH);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
917 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
918
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
919 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
920 std::string s;
2140
aa4b8895cd23 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2128
diff changeset
921 Orthanc::SystemToolbox::ReadFile(s, PATH);
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
922 Orthanc::ParsedDicomFile f(s);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
923
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
924 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0));
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
925 ASSERT_EQ(384u, decoded->GetWidth());
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
926 ASSERT_EQ(256u, decoded->GetHeight());
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
927 ASSERT_EQ(Orthanc::PixelFormat_RGB24, decoded->GetFormat());
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
928
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
929 for (int y = 0; y < 256; y++)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
930 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
931 const void* a = image.GetConstRow(y);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
932 const void* b = decoded->GetConstRow(y);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
933 ASSERT_EQ(0, memcmp(a, b, 3 * 384));
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
934 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
935 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
936 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
937
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
938
1940
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
939 TEST(TestImages, PatternUint16)
1937
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
940 {
1940
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
941 static const char* PATH = "UnitTestsResults/PatternGrayscale16.dcm";
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
942
2107
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2059
diff changeset
943 Orthanc::Image image(Orthanc::PixelFormat_Grayscale16, 256, 256, false);
1937
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
944
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
945 uint16_t v = 0;
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
946 for (int y = 0; y < 256; y++)
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
947 {
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
948 uint16_t *p = reinterpret_cast<uint16_t*>(image.GetRow(y));
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
949 for (int x = 0; x < 256; x++, v++, p++)
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
950 {
1940
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
951 *p = htole16(v); // Orthanc uses Little-Endian transfer syntax to encode images
1937
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
952 }
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
953 }
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
954
1940
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
955 Orthanc::ImageAccessor r = image.GetRegion(32, 32, 64, 192);
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
956 Orthanc::ImageProcessing::Set(r, 0);
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
957 r = image.GetRegion(160, 32, 64, 192);
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
958 Orthanc::ImageProcessing::Set(r, 65535);
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
959
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
960 {
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
961 ParsedDicomFile f(true);
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
962 f.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
963 f.ReplacePlainString(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
964 f.ReplacePlainString(DICOM_TAG_PATIENT_ID, "ORTHANC");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
965 f.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "Orthanc");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
966 f.ReplacePlainString(DICOM_TAG_STUDY_DESCRIPTION, "Patterns");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
967 f.ReplacePlainString(DICOM_TAG_SERIES_DESCRIPTION, "Grayscale16");
1940
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
968 f.EmbedImage(image);
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
969
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
970 f.SaveToFile(PATH);
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
971 }
1937
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
972
1940
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
973 {
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
974 std::string s;
2140
aa4b8895cd23 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2128
diff changeset
975 Orthanc::SystemToolbox::ReadFile(s, PATH);
1940
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
976 Orthanc::ParsedDicomFile f(s);
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
977
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
978 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0));
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
979 ASSERT_EQ(256u, decoded->GetWidth());
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
980 ASSERT_EQ(256u, decoded->GetHeight());
1940
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
981 ASSERT_EQ(Orthanc::PixelFormat_Grayscale16, decoded->GetFormat());
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
982
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
983 for (int y = 0; y < 256; y++)
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
984 {
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
985 const void* a = image.GetConstRow(y);
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
986 const void* b = decoded->GetConstRow(y);
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
987 ASSERT_EQ(0, memcmp(a, b, 512));
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
988 }
5514d37176b4 PatternUint16
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1937
diff changeset
989 }
1937
3756bedaaa36 test pattern
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1908
diff changeset
990 }
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
991
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
992
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
993 TEST(TestImages, PatternInt16)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
994 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
995 static const char* PATH = "UnitTestsResults/PatternSignedGrayscale16.dcm";
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
996
2107
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2059
diff changeset
997 Orthanc::Image image(Orthanc::PixelFormat_SignedGrayscale16, 256, 256, false);
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
998
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
999 int16_t v = -32768;
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1000 for (int y = 0; y < 256; y++)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1001 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1002 int16_t *p = reinterpret_cast<int16_t*>(image.GetRow(y));
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1003 for (int x = 0; x < 256; x++, v++, p++)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1004 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1005 *p = htole16(v); // Orthanc uses Little-Endian transfer syntax to encode images
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1006 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1007 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1008
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1009 Orthanc::ImageAccessor r = image.GetRegion(32, 32, 64, 192);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1010 Orthanc::ImageProcessing::Set(r, -32768);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1011 r = image.GetRegion(160, 32, 64, 192);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1012 Orthanc::ImageProcessing::Set(r, 32767);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1013
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1014 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1015 ParsedDicomFile f(true);
1982
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
1016 f.ReplacePlainString(DICOM_TAG_SOP_CLASS_UID, "1.2.840.10008.5.1.4.1.1.7");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
1017 f.ReplacePlainString(DICOM_TAG_STUDY_INSTANCE_UID, "1.2.276.0.7230010.3.1.2.2831176407.321.1458901422.884998");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
1018 f.ReplacePlainString(DICOM_TAG_PATIENT_ID, "ORTHANC");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
1019 f.ReplacePlainString(DICOM_TAG_PATIENT_NAME, "Orthanc");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
1020 f.ReplacePlainString(DICOM_TAG_STUDY_DESCRIPTION, "Patterns");
b5d4f9c156ad Modification of instances can now replace PixelData
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1981
diff changeset
1021 f.ReplacePlainString(DICOM_TAG_SERIES_DESCRIPTION, "SignedGrayscale16");
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1022 f.EmbedImage(image);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1023
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1024 f.SaveToFile(PATH);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1025 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1026
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1027 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1028 std::string s;
2140
aa4b8895cd23 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2128
diff changeset
1029 Orthanc::SystemToolbox::ReadFile(s, PATH);
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1030 Orthanc::ParsedDicomFile f(s);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1031
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1032 std::auto_ptr<Orthanc::ImageAccessor> decoded(Orthanc::DicomImageDecoder::Decode(f, 0));
1971
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
1033 ASSERT_EQ(256u, decoded->GetWidth());
869a87c08673 fix for mingw <= 4.2
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1970
diff changeset
1034 ASSERT_EQ(256u, decoded->GetHeight());
1941
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1035 ASSERT_EQ(Orthanc::PixelFormat_SignedGrayscale16, decoded->GetFormat());
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1036
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1037 for (int y = 0; y < 256; y++)
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1038 {
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1039 const void* a = image.GetConstRow(y);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1040 const void* b = decoded->GetConstRow(y);
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1041 ASSERT_EQ(0, memcmp(a, b, 512));
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1042 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1043 }
d7b176f7dd1b test dicom patterns
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1940
diff changeset
1044 }