Mercurial > hg > orthanc
annotate OrthancServer/Sources/ServerContext.cpp @ 5001:5a5918f2a199
fix RunCppCheck.sh
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Fri, 06 May 2022 12:04:44 +0200 |
parents | 2f30aa99c2db |
children | 877bc3b96476 |
rev | line source |
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224 | 1 /** |
2 * Orthanc - A Lightweight, RESTful DICOM Store | |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2022 Osimis S.A., Belgium |
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6 * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium |
224 | 7 * |
8 * This program is free software: you can redistribute it and/or | |
9 * modify it under the terms of the GNU General Public License as | |
10 * published by the Free Software Foundation, either version 3 of the | |
11 * License, or (at your option) any later version. | |
12 * | |
13 * This program is distributed in the hope that it will be useful, but | |
14 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
16 * General Public License for more details. | |
17 * | |
18 * You should have received a copy of the GNU General Public License | |
19 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
20 **/ | |
21 | |
22 | |
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23 #include "PrecompiledHeadersServer.h" |
224 | 24 #include "ServerContext.h" |
25 | |
4045 | 26 #include "../../OrthancFramework/Sources/Cache/SharedArchive.h" |
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27 #include "../../OrthancFramework/Sources/DicomFormat/DicomElement.h" |
4499 | 28 #include "../../OrthancFramework/Sources/DicomFormat/DicomStreamReader.h" |
4045 | 29 #include "../../OrthancFramework/Sources/DicomParsing/DcmtkTranscoder.h" |
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30 #include "../../OrthancFramework/Sources/DicomParsing/DicomModification.h" |
4045 | 31 #include "../../OrthancFramework/Sources/DicomParsing/FromDcmtkBridge.h" |
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32 #include "../../OrthancFramework/Sources/DicomParsing/Internals/DicomImageDecoder.h" |
4045 | 33 #include "../../OrthancFramework/Sources/FileStorage/StorageAccessor.h" |
34 #include "../../OrthancFramework/Sources/HttpServer/FilesystemHttpSender.h" | |
35 #include "../../OrthancFramework/Sources/HttpServer/HttpStreamTranscoder.h" | |
36 #include "../../OrthancFramework/Sources/JobsEngine/SetOfInstancesJob.h" | |
37 #include "../../OrthancFramework/Sources/Logging.h" | |
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38 #include "../../OrthancFramework/Sources/MallocMemoryBuffer.h" |
4045 | 39 #include "../../OrthancFramework/Sources/MetricsRegistry.h" |
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40 #include "../Plugins/Engine/OrthancPlugins.h" |
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41 |
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42 #include "OrthancConfiguration.h" |
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43 #include "OrthancRestApi/OrthancRestApi.h" |
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44 #include "Search/DatabaseLookup.h" |
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45 #include "ServerJobs/OrthancJobUnserializer.h" |
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46 #include "ServerToolbox.h" |
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47 #include "StorageCommitmentReports.h" |
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48 |
794 | 49 #include <dcmtk/dcmdata/dcfilefo.h> |
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50 #include <dcmtk/dcmnet/dimse.h> |
224 | 51 |
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52 |
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53 static size_t DICOM_CACHE_SIZE = 128 * 1024 * 1024; // 128 MB |
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54 |
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55 |
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56 /** |
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57 * IMPORTANT: We make the assumption that the same instance of |
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58 * FileStorage can be accessed from multiple threads. This seems OK |
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59 * since the filesystem implements the required locking mechanisms, |
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60 * but maybe a read-writer lock on the "FileStorage" could be |
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61 * useful. Conversely, "ServerIndex" already implements mutex-based |
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62 * locking. |
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63 **/ |
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64 |
224 | 65 namespace Orthanc |
66 { | |
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67 static void ComputeStudyTags(ExpandedResource& resource, |
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68 ServerContext& context, |
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69 const std::string& studyPublicId, |
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70 const std::set<DicomTag>& requestedTags); |
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71 |
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72 |
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73 static bool IsUncompressedTransferSyntax(DicomTransferSyntax transferSyntax) |
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74 { |
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75 return (transferSyntax == DicomTransferSyntax_LittleEndianImplicit || |
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76 transferSyntax == DicomTransferSyntax_LittleEndianExplicit || |
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77 transferSyntax == DicomTransferSyntax_BigEndianExplicit); |
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78 } |
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79 |
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80 |
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81 static bool IsTranscodableTransferSyntax(DicomTransferSyntax transferSyntax) |
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82 { |
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83 return ( |
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84 // Do not try to transcode DICOM videos (new in Orthanc 1.8.2) |
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85 transferSyntax != DicomTransferSyntax_MPEG2MainProfileAtMainLevel && |
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86 transferSyntax != DicomTransferSyntax_MPEG2MainProfileAtHighLevel && |
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87 transferSyntax != DicomTransferSyntax_MPEG4HighProfileLevel4_1 && |
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88 transferSyntax != DicomTransferSyntax_MPEG4BDcompatibleHighProfileLevel4_1 && |
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89 transferSyntax != DicomTransferSyntax_MPEG4HighProfileLevel4_2_For2DVideo && |
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90 transferSyntax != DicomTransferSyntax_MPEG4HighProfileLevel4_2_For3DVideo && |
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91 transferSyntax != DicomTransferSyntax_MPEG4StereoHighProfileLevel4_2 && |
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92 transferSyntax != DicomTransferSyntax_HEVCMainProfileLevel5_1 && |
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93 transferSyntax != DicomTransferSyntax_HEVCMain10ProfileLevel5_1 && |
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94 |
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95 // Do not try to transcode special transfer syntaxes |
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96 transferSyntax != DicomTransferSyntax_RFC2557MimeEncapsulation && |
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97 transferSyntax != DicomTransferSyntax_XML); |
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98 } |
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99 |
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100 |
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101 ServerContext::StoreResult::StoreResult() : |
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102 status_(StoreStatus_Failure), |
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103 cstoreStatusCode_(0) |
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104 { |
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105 } |
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106 |
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107 |
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108 void ServerContext::ChangeThread(ServerContext* that, |
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109 unsigned int sleepDelay) |
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110 { |
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111 while (!that->done_) |
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112 { |
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113 std::unique_ptr<IDynamicObject> obj(that->pendingChanges_.Dequeue(sleepDelay)); |
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114 |
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115 if (obj.get() != NULL) |
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116 { |
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117 const ServerIndexChange& change = dynamic_cast<const ServerIndexChange&>(*obj.get()); |
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118 |
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119 boost::shared_lock<boost::shared_mutex> lock(that->listenersMutex_); |
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120 for (ServerListeners::iterator it = that->listeners_.begin(); |
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121 it != that->listeners_.end(); ++it) |
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122 { |
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123 try |
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124 { |
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125 try |
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126 { |
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127 it->GetListener().SignalChange(change); |
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128 } |
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129 catch (std::bad_alloc&) |
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130 { |
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131 LOG(ERROR) << "Not enough memory while signaling a change"; |
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132 } |
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133 catch (...) |
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134 { |
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135 throw OrthancException(ErrorCode_InternalError); |
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136 } |
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137 } |
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138 catch (OrthancException& e) |
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139 { |
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140 LOG(ERROR) << "Error in the " << it->GetDescription() |
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141 << " callback while signaling a change: " << e.What() |
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142 << " (code " << e.GetErrorCode() << ")"; |
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143 } |
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144 } |
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145 } |
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146 } |
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147 } |
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148 |
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149 |
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150 void ServerContext::SaveJobsThread(ServerContext* that, |
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151 unsigned int sleepDelay) |
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152 { |
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153 static const boost::posix_time::time_duration PERIODICITY = |
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154 boost::posix_time::seconds(10); |
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155 |
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156 boost::posix_time::ptime next = |
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157 boost::posix_time::microsec_clock::universal_time() + PERIODICITY; |
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158 |
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159 while (!that->done_) |
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160 { |
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161 boost::this_thread::sleep(boost::posix_time::milliseconds(sleepDelay)); |
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162 |
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163 if (that->haveJobsChanged_ || |
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164 boost::posix_time::microsec_clock::universal_time() >= next) |
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165 { |
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166 that->haveJobsChanged_ = false; |
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167 that->SaveJobsEngine(); |
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168 next = boost::posix_time::microsec_clock::universal_time() + PERIODICITY; |
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169 } |
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170 } |
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171 } |
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172 |
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173 |
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174 void ServerContext::SignalJobSubmitted(const std::string& jobId) |
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175 { |
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176 haveJobsChanged_ = true; |
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177 mainLua_.SignalJobSubmitted(jobId); |
4129 | 178 |
179 #if ORTHANC_ENABLE_PLUGINS == 1 | |
180 if (HasPlugins()) | |
181 { | |
182 GetPlugins().SignalJobSubmitted(jobId); | |
183 } | |
184 #endif | |
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185 } |
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186 |
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187 |
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188 void ServerContext::SignalJobSuccess(const std::string& jobId) |
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189 { |
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190 haveJobsChanged_ = true; |
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191 mainLua_.SignalJobSuccess(jobId); |
4129 | 192 |
193 #if ORTHANC_ENABLE_PLUGINS == 1 | |
194 if (HasPlugins()) | |
195 { | |
196 GetPlugins().SignalJobSuccess(jobId); | |
197 } | |
198 #endif | |
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199 } |
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200 |
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201 |
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202 void ServerContext::SignalJobFailure(const std::string& jobId) |
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203 { |
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204 haveJobsChanged_ = true; |
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205 mainLua_.SignalJobFailure(jobId); |
4129 | 206 |
207 #if ORTHANC_ENABLE_PLUGINS == 1 | |
208 if (HasPlugins()) | |
209 { | |
210 GetPlugins().SignalJobFailure(jobId); | |
211 } | |
212 #endif | |
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213 } |
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214 |
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215 |
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216 void ServerContext::SetupJobsEngine(bool unitTesting, |
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217 bool loadJobsFromDatabase) |
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218 { |
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219 if (loadJobsFromDatabase) |
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220 { |
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221 std::string serialized; |
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222 if (index_.LookupGlobalProperty(serialized, GlobalProperty_JobsRegistry, false /* not shared */)) |
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223 { |
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224 LOG(WARNING) << "Reloading the jobs from the last execution of Orthanc"; |
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225 |
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226 try |
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227 { |
4205 | 228 OrthancJobUnserializer unserializer(*this); |
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229 jobsEngine_.LoadRegistryFromString(unserializer, serialized); |
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230 } |
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231 catch (OrthancException& e) |
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232 { |
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233 LOG(WARNING) << "Cannot unserialize the jobs engine, starting anyway: " << e.What(); |
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234 } |
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235 } |
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236 else |
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237 { |
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238 LOG(INFO) << "The last execution of Orthanc has archived no job"; |
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239 } |
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240 } |
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241 else |
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242 { |
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243 LOG(INFO) << "Not reloading the jobs from the last execution of Orthanc"; |
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244 } |
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245 |
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246 jobsEngine_.GetRegistry().SetObserver(*this); |
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247 jobsEngine_.Start(); |
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248 isJobsEngineUnserialized_ = true; |
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249 |
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250 saveJobsThread_ = boost::thread(SaveJobsThread, this, (unitTesting ? 20 : 100)); |
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251 } |
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252 |
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253 |
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254 void ServerContext::SaveJobsEngine() |
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255 { |
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256 if (saveJobs_) |
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257 { |
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258 LOG(TRACE) << "Serializing the content of the jobs engine"; |
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259 |
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260 try |
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261 { |
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262 Json::Value value; |
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263 jobsEngine_.GetRegistry().Serialize(value); |
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264 |
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265 std::string serialized; |
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266 Toolbox::WriteFastJson(serialized, value); |
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267 |
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268 index_.SetGlobalProperty(GlobalProperty_JobsRegistry, false /* not shared */, serialized); |
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269 } |
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270 catch (OrthancException& e) |
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271 { |
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272 LOG(ERROR) << "Cannot serialize the jobs engine: " << e.What(); |
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273 } |
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274 } |
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275 } |
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276 |
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277 |
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278 void ServerContext::PublishDicomCacheMetrics() |
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279 { |
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280 metricsRegistry_->SetValue("orthanc_dicom_cache_size", |
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281 static_cast<float>(dicomCache_.GetCurrentSize()) / static_cast<float>(1024 * 1024)); |
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282 metricsRegistry_->SetValue("orthanc_dicom_cache_count", |
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283 static_cast<float>(dicomCache_.GetNumberOfItems())); |
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284 } |
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285 |
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286 |
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287 ServerContext::ServerContext(IDatabaseWrapper& database, |
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288 IStorageArea& area, |
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289 bool unitTesting, |
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290 size_t maxCompletedJobs) : |
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291 index_(*this, database, (unitTesting ? 20 : 500)), |
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292 area_(area), |
656 | 293 compressionEnabled_(false), |
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294 storeMD5_(true), |
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295 largeDicomThrottler_(1), |
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296 dicomCache_(DICOM_CACHE_SIZE), |
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297 mainLua_(*this), |
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298 filterLua_(*this), |
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299 luaListener_(*this), |
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300 jobsEngine_(maxCompletedJobs), |
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301 #if ORTHANC_ENABLE_PLUGINS == 1 |
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302 plugins_(NULL), |
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303 #endif |
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304 done_(false), |
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305 haveJobsChanged_(false), |
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306 isJobsEngineUnserialized_(false), |
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307 metricsRegistry_(new MetricsRegistry), |
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308 isHttpServerSecure_(true), |
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309 isExecuteLuaEnabled_(false), |
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310 overwriteInstances_(false), |
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311 dcmtkTranscoder_(new DcmtkTranscoder), |
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312 isIngestTranscoding_(false), |
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313 ingestTranscodingOfUncompressed_(true), |
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314 ingestTranscodingOfCompressed_(true), |
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315 preferredTransferSyntax_(DicomTransferSyntax_LittleEndianExplicit), |
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316 deidentifyLogs_(false) |
224 | 317 { |
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318 try |
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319 { |
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320 unsigned int lossyQuality; |
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321 |
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322 { |
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323 OrthancConfiguration::ReaderLock lock; |
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324 |
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325 queryRetrieveArchive_.reset( |
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326 new SharedArchive(lock.GetConfiguration().GetUnsignedIntegerParameter("QueryRetrieveSize", 100))); |
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327 mediaArchive_.reset( |
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328 new SharedArchive(lock.GetConfiguration().GetUnsignedIntegerParameter("MediaArchiveSize", 1))); |
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329 defaultLocalAet_ = lock.GetConfiguration().GetOrthancAET(); |
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330 jobsEngine_.SetWorkersCount(lock.GetConfiguration().GetUnsignedIntegerParameter("ConcurrentJobs", 2)); |
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331 saveJobs_ = lock.GetConfiguration().GetBooleanParameter("SaveJobs", true); |
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332 metricsRegistry_->SetEnabled(lock.GetConfiguration().GetBooleanParameter("MetricsEnabled", true)); |
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333 |
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334 // New configuration options in Orthanc 1.5.1 |
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335 findStorageAccessMode_ = StringToFindStorageAccessMode(lock.GetConfiguration().GetStringParameter("StorageAccessOnFind", "Always")); |
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336 limitFindInstances_ = lock.GetConfiguration().GetUnsignedIntegerParameter("LimitFindInstances", 0); |
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337 limitFindResults_ = lock.GetConfiguration().GetUnsignedIntegerParameter("LimitFindResults", 0); |
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338 |
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339 // New configuration option in Orthanc 1.6.0 |
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340 storageCommitmentReports_.reset(new StorageCommitmentReports(lock.GetConfiguration().GetUnsignedIntegerParameter("StorageCommitmentReportsSize", 100))); |
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341 |
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342 // New options in Orthanc 1.7.0 |
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343 transcodeDicomProtocol_ = lock.GetConfiguration().GetBooleanParameter("TranscodeDicomProtocol", true); |
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344 builtinDecoderTranscoderOrder_ = StringToBuiltinDecoderTranscoderOrder(lock.GetConfiguration().GetStringParameter("BuiltinDecoderTranscoderOrder", "After")); |
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345 lossyQuality = lock.GetConfiguration().GetUnsignedIntegerParameter("DicomLossyTranscodingQuality", 90); |
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346 |
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347 std::string s; |
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348 if (lock.GetConfiguration().LookupStringParameter(s, "IngestTranscoding")) |
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349 { |
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350 if (LookupTransferSyntax(ingestTransferSyntax_, s)) |
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351 { |
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352 isIngestTranscoding_ = true; |
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353 LOG(WARNING) << "Incoming DICOM instances will automatically be transcoded to " |
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354 << "transfer syntax: " << GetTransferSyntaxUid(ingestTransferSyntax_); |
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355 |
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356 // New options in Orthanc 1.8.2 |
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357 ingestTranscodingOfUncompressed_ = lock.GetConfiguration().GetBooleanParameter("IngestTranscodingOfUncompressed", true); |
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358 ingestTranscodingOfCompressed_ = lock.GetConfiguration().GetBooleanParameter("IngestTranscodingOfCompressed", true); |
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359 |
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360 LOG(WARNING) << " Ingest transcoding will " |
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361 << (ingestTranscodingOfUncompressed_ ? "be applied" : "*not* be applied") |
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362 << " to uncompressed transfer syntaxes (Little Endian Implicit/Explicit, Big Endian Explicit)"; |
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363 |
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364 LOG(WARNING) << " Ingest transcoding will " |
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365 << (ingestTranscodingOfCompressed_ ? "be applied" : "*not* be applied") |
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366 << " to compressed transfer syntaxes"; |
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367 } |
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368 else |
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369 { |
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370 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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371 "Unknown transfer syntax for ingest transcoding: " + s); |
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372 } |
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373 } |
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374 else |
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375 { |
3941
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376 isIngestTranscoding_ = false; |
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377 LOG(INFO) << "Automated transcoding of incoming DICOM instances is disabled"; |
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378 } |
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379 |
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380 // New options in Orthanc 1.8.2 |
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381 if (lock.GetConfiguration().GetBooleanParameter("DeidentifyLogs", true)) |
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382 { |
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383 deidentifyLogs_ = true; |
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384 CLOG(INFO, DICOM) << "Deidentification of log contents (notably for DIMSE queries) is enabled"; |
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385 |
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386 DicomVersion version = StringToDicomVersion( |
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387 lock.GetConfiguration().GetStringParameter("DeidentifyLogsDicomVersion", "2021b")); |
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388 CLOG(INFO, DICOM) << "Version of DICOM standard used for deidentification is " |
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389 << EnumerationToString(version); |
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390 |
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391 logsDeidentifierRules_.SetupAnonymization(version); |
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392 } |
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393 else |
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394 { |
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395 deidentifyLogs_ = false; |
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396 CLOG(INFO, DICOM) << "Deidentification of log contents (notably for DIMSE queries) is disabled"; |
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397 } |
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398 |
4473
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399 // New options in Orthanc 1.9.0 |
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400 if (lock.GetConfiguration().LookupStringParameter(s, "DicomScuPreferredTransferSyntax") && |
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401 !LookupTransferSyntax(preferredTransferSyntax_, s)) |
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402 { |
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403 throw OrthancException(ErrorCode_ParameterOutOfRange, |
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|
404 "Unknown preferred transfer syntax: " + s); |
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405 } |
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406 |
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|
407 CLOG(INFO, DICOM) << "Preferred transfer syntax for Orthanc C-STORE SCU: " |
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|
408 << GetTransferSyntaxUid(preferredTransferSyntax_); |
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409 |
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|
410 lock.GetConfiguration().GetAcceptedTransferSyntaxes(acceptedTransferSyntaxes_); |
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411 |
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412 isUnknownSopClassAccepted_ = lock.GetConfiguration().GetBooleanParameter("UnknownSopClassAccepted", false); |
3939
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413 } |
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414 |
3939
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415 jobsEngine_.SetThreadSleep(unitTesting ? 20 : 200); |
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416 |
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417 listeners_.push_back(ServerListener(luaListener_, "Lua")); |
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418 changeThread_ = boost::thread(ChangeThread, this, (unitTesting ? 20 : 100)); |
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419 |
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420 dynamic_cast<DcmtkTranscoder&>(*dcmtkTranscoder_).SetLossyQuality(lossyQuality); |
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421 } |
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|
422 catch (OrthancException&) |
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423 { |
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424 Stop(); |
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425 throw; |
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426 } |
224 | 427 } |
428 | |
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429 |
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430 |
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431 ServerContext::~ServerContext() |
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432 { |
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433 if (!done_) |
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434 { |
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|
435 LOG(ERROR) << "INTERNAL ERROR: ServerContext::Stop() should be invoked manually to avoid mess in the destruction order!"; |
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436 Stop(); |
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437 } |
1447
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438 } |
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439 |
1436
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440 |
1447
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|
441 void ServerContext::Stop() |
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442 { |
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443 if (!done_) |
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444 { |
1459 | 445 { |
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446 boost::unique_lock<boost::shared_mutex> lock(listenersMutex_); |
1459 | 447 listeners_.clear(); |
448 } | |
449 | |
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450 done_ = true; |
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451 |
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452 if (changeThread_.joinable()) |
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453 { |
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454 changeThread_.join(); |
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455 } |
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456 |
2672
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457 if (saveJobsThread_.joinable()) |
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458 { |
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459 saveJobsThread_.join(); |
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460 } |
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|
461 |
4024
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|
462 jobsEngine_.GetRegistry().ResetObserver(); |
2815
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463 |
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464 if (isJobsEngineUnserialized_) |
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465 { |
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466 // Avoid losing jobs if the JobsRegistry cannot be unserialized |
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467 SaveJobsEngine(); |
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468 } |
2668
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469 |
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470 // Do not change the order below! |
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471 jobsEngine_.Stop(); |
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472 index_.Stop(); |
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473 } |
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474 } |
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475 |
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476 |
236 | 477 void ServerContext::SetCompressionEnabled(bool enabled) |
478 { | |
479 if (enabled) | |
480 LOG(WARNING) << "Disk compression is enabled"; | |
481 else | |
482 LOG(WARNING) << "Disk compression is disabled"; | |
483 | |
484 compressionEnabled_ = enabled; | |
485 } | |
486 | |
1549
e5e975e9b738
refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1548
diff
changeset
|
487 |
1126
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1124
diff
changeset
|
488 void ServerContext::RemoveFile(const std::string& fileUuid, |
bf67431a7383
handling of file content type in IStorageArea
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1124
diff
changeset
|
489 FileContentType type) |
227
209ca3f6db62
dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
226
diff
changeset
|
490 { |
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
491 StorageAccessor accessor(area_, storageCache_, GetMetricsRegistry()); |
3175
574890d14c92
new metrics: orthanc_store_dicom_duration_ms, orthanc_storage_[create|read|remove]_duration_ms
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3174
diff
changeset
|
492 accessor.Remove(fileUuid, type); |
227
209ca3f6db62
dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
226
diff
changeset
|
493 } |
209ca3f6db62
dicom-scu from rest
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
226
diff
changeset
|
494 |
996
cf52f3bcb2b3
clarification of Lua classes wrt multithreading
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
995
diff
changeset
|
495 |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
496 ServerContext::StoreResult ServerContext::StoreAfterTranscoding(std::string& resultPublicId, |
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
497 DicomInstanceToStore& dicom, |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
498 StoreInstanceMode mode, |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
499 bool isReconstruct) |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
500 { |
3814
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
501 bool overwrite; |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
502 switch (mode) |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
503 { |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
504 case StoreInstanceMode_Default: |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
505 overwrite = overwriteInstances_; |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
506 break; |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
507 |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
508 case StoreInstanceMode_OverwriteDuplicate: |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
509 overwrite = true; |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
510 break; |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
511 |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
512 case StoreInstanceMode_IgnoreDuplicate: |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
513 overwrite = false; |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
514 break; |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
515 |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
516 default: |
023b2a9f3aa1
new enum: StoreInstanceMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3813
diff
changeset
|
517 throw OrthancException(ErrorCode_ParameterOutOfRange); |
4499 | 518 } |
519 | |
520 bool hasPixelDataOffset; | |
521 uint64_t pixelDataOffset; | |
522 hasPixelDataOffset = DicomStreamReader::LookupPixelDataOffset( | |
523 pixelDataOffset, dicom.GetBufferData(), dicom.GetBufferSize()); | |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
524 |
4507
b4c58795f3a8
widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4506
diff
changeset
|
525 DicomTransferSyntax transferSyntax; |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
526 bool hasTransferSyntax = dicom.LookupTransferSyntax(transferSyntax); |
4507
b4c58795f3a8
widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4506
diff
changeset
|
527 |
4505
97d103b57cd1
removed cached dicom summary from DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4504
diff
changeset
|
528 DicomMap summary; |
4507
b4c58795f3a8
widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4506
diff
changeset
|
529 dicom.GetSummary(summary); |
4505
97d103b57cd1
removed cached dicom summary from DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4504
diff
changeset
|
530 |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
531 try |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
532 { |
3175
574890d14c92
new metrics: orthanc_store_dicom_duration_ms, orthanc_storage_[create|read|remove]_duration_ms
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3174
diff
changeset
|
533 MetricsRegistry::Timer timer(GetMetricsRegistry(), "orthanc_store_dicom_duration_ms"); |
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
534 StorageAccessor accessor(area_, storageCache_, GetMetricsRegistry()); |
1549
e5e975e9b738
refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1548
diff
changeset
|
535 |
4507
b4c58795f3a8
widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4506
diff
changeset
|
536 DicomInstanceHasher hasher(summary); |
b4c58795f3a8
widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4506
diff
changeset
|
537 resultPublicId = hasher.HashInstance(); |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
538 |
4504
7d1eabfac6e0
removed cached dicom-as-json from DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4500
diff
changeset
|
539 Json::Value dicomAsJson; |
4507
b4c58795f3a8
widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4506
diff
changeset
|
540 dicom.GetDicomAsJson(dicomAsJson); |
4504
7d1eabfac6e0
removed cached dicom-as-json from DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4500
diff
changeset
|
541 |
1574
0c29ebe80ac9
give access to full request origin in ReceivedInstanceFilter (Lua)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1550
diff
changeset
|
542 Json::Value simplifiedTags; |
4504
7d1eabfac6e0
removed cached dicom-as-json from DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4500
diff
changeset
|
543 Toolbox::SimplifyDicomAsJson(simplifiedTags, dicomAsJson, DicomToJsonFormat_Human); |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
544 |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
545 // Test if the instance must be filtered out |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
546 StoreResult result; |
1433
461e7554bff7
refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1427
diff
changeset
|
547 |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
548 if (!isReconstruct) // skip all filters if this is a reconstruction |
1433
461e7554bff7
refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1427
diff
changeset
|
549 { |
3947
cf6eb4fc6841
fix issue 179: use a shared mutex to avoid deadlock in python plugins
Alain Mazy <alain@mazy.be>
parents:
3945
diff
changeset
|
550 boost::shared_lock<boost::shared_mutex> lock(listenersMutex_); |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1447
diff
changeset
|
551 |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1447
diff
changeset
|
552 for (ServerListeners::iterator it = listeners_.begin(); it != listeners_.end(); ++it) |
1433
461e7554bff7
refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1427
diff
changeset
|
553 { |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1447
diff
changeset
|
554 try |
1433
461e7554bff7
refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1427
diff
changeset
|
555 { |
1574
0c29ebe80ac9
give access to full request origin in ReceivedInstanceFilter (Lua)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1550
diff
changeset
|
556 if (!it->GetListener().FilterIncomingInstance(dicom, simplifiedTags)) |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1447
diff
changeset
|
557 { |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
558 result.SetStatus(StoreStatus_FilteredOut); |
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
559 result.SetCStoreStatusCode(STATUS_Success); // to keep backward compatibility, we still return 'success' |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1447
diff
changeset
|
560 break; |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1447
diff
changeset
|
561 } |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
562 |
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
563 if (dicom.GetOrigin().GetRequestOrigin() == Orthanc::RequestOrigin_DicomProtocol) |
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
564 { |
4921
309fb4f02704
fix signature of OrthancPluginIncomingCStoreInstanceFilter
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4919
diff
changeset
|
565 uint16_t filterResult = STATUS_Success; |
309fb4f02704
fix signature of OrthancPluginIncomingCStoreInstanceFilter
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4919
diff
changeset
|
566 if (!it->GetListener().FilterIncomingCStoreInstance(filterResult, dicom, simplifiedTags)) |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
567 { |
4921
309fb4f02704
fix signature of OrthancPluginIncomingCStoreInstanceFilter
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4919
diff
changeset
|
568 // The instance is to be discarded |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
569 result.SetStatus(StoreStatus_FilteredOut); |
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
570 result.SetCStoreStatusCode(filterResult); |
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
571 break; |
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
572 } |
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
573 } |
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
574 |
1433
461e7554bff7
refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1427
diff
changeset
|
575 } |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1447
diff
changeset
|
576 catch (OrthancException& e) |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1447
diff
changeset
|
577 { |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1447
diff
changeset
|
578 LOG(ERROR) << "Error in the " << it->GetDescription() |
2135
cadfe0a2a393
fix in the sample basic plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2134
diff
changeset
|
579 << " callback while receiving an instance: " << e.What() |
cadfe0a2a393
fix in the sample basic plugin
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2134
diff
changeset
|
580 << " (code " << e.GetErrorCode() << ")"; |
1453
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1447
diff
changeset
|
581 throw; |
c0bdc47165ef
code to warn about possible threading problems
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1447
diff
changeset
|
582 } |
1433
461e7554bff7
refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1427
diff
changeset
|
583 } |
461e7554bff7
refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1427
diff
changeset
|
584 } |
461e7554bff7
refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1427
diff
changeset
|
585 |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
586 if (result.GetStatus() == StoreStatus_FilteredOut) |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
587 { |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
588 LOG(INFO) << "An incoming instance has been discarded by the filter"; |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
589 return result; |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
590 } |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
591 |
4457
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
592 // Remove the file from the DicomCache (useful if |
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
593 // "OverwriteInstances" is set to "true") |
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
594 dicomCache_.Invalidate(resultPublicId); |
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
595 PublishDicomCacheMetrics(); |
2825
8aa6aef11b70
New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2815
diff
changeset
|
596 |
1549
e5e975e9b738
refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1548
diff
changeset
|
597 // TODO Should we use "gzip" instead? |
e5e975e9b738
refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1548
diff
changeset
|
598 CompressionType compression = (compressionEnabled_ ? CompressionType_ZlibWithSize : CompressionType_None); |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
599 |
1549
e5e975e9b738
refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1548
diff
changeset
|
600 FileInfo dicomInfo = accessor.Write(dicom.GetBufferData(), dicom.GetBufferSize(), |
e5e975e9b738
refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1548
diff
changeset
|
601 FileContentType_Dicom, compression, storeMD5_); |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
602 |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
603 ServerIndex::Attachments attachments; |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
604 attachments.push_back(dicomInfo); |
4500
3b4940bca158
added safeguards in Orthanc::FileInfo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4499
diff
changeset
|
605 |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
606 FileInfo dicomUntilPixelData; |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
607 if (hasPixelDataOffset && |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
608 (!area_.HasReadRange() || |
4519 | 609 compressionEnabled_)) |
4500
3b4940bca158
added safeguards in Orthanc::FileInfo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4499
diff
changeset
|
610 { |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
611 dicomUntilPixelData = accessor.Write(dicom.GetBufferData(), pixelDataOffset, |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
612 FileContentType_DicomUntilPixelData, compression, storeMD5_); |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
613 attachments.push_back(dicomUntilPixelData); |
4500
3b4940bca158
added safeguards in Orthanc::FileInfo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4499
diff
changeset
|
614 } |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
615 |
1067
ace99e272203
access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1066
diff
changeset
|
616 typedef std::map<MetadataType, std::string> InstanceMetadata; |
ace99e272203
access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1066
diff
changeset
|
617 InstanceMetadata instanceMetadata; |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
618 result.SetStatus(index_.Store( |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
619 instanceMetadata, summary, attachments, dicom.GetMetadata(), dicom.GetOrigin(), overwrite, |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
620 hasTransferSyntax, transferSyntax, hasPixelDataOffset, pixelDataOffset, isReconstruct)); |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
621 |
1433
461e7554bff7
refactoring: LuaScripting
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1427
diff
changeset
|
622 // Only keep the metadata for the "instance" level |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
623 dicom.ClearMetadata(); |
1067
ace99e272203
access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1066
diff
changeset
|
624 |
ace99e272203
access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1066
diff
changeset
|
625 for (InstanceMetadata::const_iterator it = instanceMetadata.begin(); |
1304 | 626 it != instanceMetadata.end(); ++it) |
1067
ace99e272203
access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1066
diff
changeset
|
627 { |
4506
ac69c9f76c71
refactoring ServerIndex::Store()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4505
diff
changeset
|
628 dicom.AddMetadata(ResourceType_Instance, it->first, it->second); |
1067
ace99e272203
access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1066
diff
changeset
|
629 } |
ace99e272203
access metadata in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1066
diff
changeset
|
630 |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
631 if (result.GetStatus() != StoreStatus_Success) |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
632 { |
1549
e5e975e9b738
refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1548
diff
changeset
|
633 accessor.Remove(dicomInfo); |
4500
3b4940bca158
added safeguards in Orthanc::FileInfo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4499
diff
changeset
|
634 |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
635 if (dicomUntilPixelData.IsValid()) |
4500
3b4940bca158
added safeguards in Orthanc::FileInfo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4499
diff
changeset
|
636 { |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4513
diff
changeset
|
637 accessor.Remove(dicomUntilPixelData); |
4500
3b4940bca158
added safeguards in Orthanc::FileInfo
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4499
diff
changeset
|
638 } |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
639 } |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
640 |
4994 | 641 if (!isReconstruct) |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
642 { |
4994 | 643 // skip logs in case of reconstruction |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
644 switch (result.GetStatus()) |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
645 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
646 case StoreStatus_Success: |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
647 LOG(INFO) << "New instance stored"; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
648 break; |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
649 |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
650 case StoreStatus_AlreadyStored: |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
651 LOG(INFO) << "Already stored"; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
652 break; |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
653 |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
654 case StoreStatus_Failure: |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
655 LOG(ERROR) << "Store failure"; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
656 break; |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
657 |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
658 default: |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
659 // This should never happen |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
660 break; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
661 } |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
662 |
4994 | 663 // skip all signals if this is a reconstruction |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
664 if (result.GetStatus() == StoreStatus_Success || |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
665 result.GetStatus() == StoreStatus_AlreadyStored) |
1066
bb82e5e818e9
OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1065
diff
changeset
|
666 { |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
667 boost::shared_lock<boost::shared_mutex> lock(listenersMutex_); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
668 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
669 for (ServerListeners::iterator it = listeners_.begin(); it != listeners_.end(); ++it) |
1066
bb82e5e818e9
OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1065
diff
changeset
|
670 { |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
671 try |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
672 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
673 it->GetListener().SignalStoredInstance(resultPublicId, dicom, simplifiedTags); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
674 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
675 catch (OrthancException& e) |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
676 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
677 LOG(ERROR) << "Error in the " << it->GetDescription() |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
678 << " callback while receiving an instance: " << e.What() |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
679 << " (code " << e.GetErrorCode() << ")"; |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
680 } |
1066
bb82e5e818e9
OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1065
diff
changeset
|
681 } |
bb82e5e818e9
OnStoredInstance callback in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1065
diff
changeset
|
682 } |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
683 } |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
684 |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
685 return result; |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
686 } |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
687 catch (OrthancException& e) |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
688 { |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
689 if (e.GetErrorCode() == ErrorCode_InexistentTag) |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
690 { |
4505
97d103b57cd1
removed cached dicom summary from DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4504
diff
changeset
|
691 summary.LogMissingTagsForStore(); |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
692 } |
4505
97d103b57cd1
removed cached dicom summary from DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4504
diff
changeset
|
693 |
1004
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
694 throw; |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
695 } |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
696 } |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
697 |
a226e0959d8b
DicomInstanceToStore
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1002
diff
changeset
|
698 |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
699 ServerContext::StoreResult ServerContext::Store(std::string& resultPublicId, |
4845
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
700 DicomInstanceToStore& receivedDicom, |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
701 StoreInstanceMode mode) |
4845
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
702 { |
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
703 DicomInstanceToStore* dicom = &receivedDicom; |
4913
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
704 |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
705 // WARNING: The scope of "modifiedBuffer" and "modifiedDicom" must |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
706 // be the same as that of "dicom" |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
707 MallocMemoryBuffer modifiedBuffer; |
4845
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
708 std::unique_ptr<DicomInstanceToStore> modifiedDicom; |
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
709 |
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
710 #if ORTHANC_ENABLE_PLUGINS == 1 |
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
711 if (HasPlugins()) |
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
712 { |
4913
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
713 // New in Orthanc 1.10.0 |
4845
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
714 |
4919
676e03e69703
added origin in OrthancPluginReceivedInstanceCallback
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4913
diff
changeset
|
715 OrthancPluginReceivedInstanceAction action = GetPlugins().ApplyReceivedInstanceCallbacks( |
676e03e69703
added origin in OrthancPluginReceivedInstanceCallback
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4913
diff
changeset
|
716 modifiedBuffer, receivedDicom.GetBufferData(), receivedDicom.GetBufferSize(), receivedDicom.GetOrigin().GetRequestOrigin()); |
4845
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
717 |
4913
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
718 switch (action) |
4845
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
719 { |
4919
676e03e69703
added origin in OrthancPluginReceivedInstanceCallback
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4913
diff
changeset
|
720 case OrthancPluginReceivedInstanceAction_Discard: |
4913
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
721 { |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
722 CLOG(INFO, PLUGINS) << "A plugin has discarded the instance in its ReceivedInstanceCallback"; |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
723 StoreResult result; |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
724 result.SetStatus(StoreStatus_FilteredOut); |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
725 return result; |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
726 } |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
727 |
4919
676e03e69703
added origin in OrthancPluginReceivedInstanceCallback
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4913
diff
changeset
|
728 case OrthancPluginReceivedInstanceAction_KeepAsIs: |
676e03e69703
added origin in OrthancPluginReceivedInstanceCallback
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4913
diff
changeset
|
729 // This path is also used when no ReceivedInstanceCallback is installed by the plugins |
4913
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
730 break; |
4845
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
731 |
4919
676e03e69703
added origin in OrthancPluginReceivedInstanceCallback
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4913
diff
changeset
|
732 case OrthancPluginReceivedInstanceAction_Modify: |
4913
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
733 if (modifiedBuffer.GetSize() > 0 && |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
734 modifiedBuffer.GetData() != NULL) |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
735 { |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
736 CLOG(INFO, PLUGINS) << "A plugin has modified the instance in its ReceivedInstanceCallback"; |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
737 modifiedDicom.reset(DicomInstanceToStore::CreateFromBuffer(modifiedBuffer.GetData(), modifiedBuffer.GetSize())); |
4919
676e03e69703
added origin in OrthancPluginReceivedInstanceCallback
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4913
diff
changeset
|
738 modifiedDicom->SetOrigin(receivedDicom.GetOrigin()); |
4913
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
739 dicom = modifiedDicom.get(); |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
740 } |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
741 else |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
742 { |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
743 throw OrthancException(ErrorCode_Plugin, "The ReceivedInstanceCallback plugin is not returning a modified buffer while it has modified the instance"); |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
744 } |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
745 break; |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
746 |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
747 default: |
c1b19f95e166
fix signature of OrthancPluginReceivedInstanceCallback for ABI compatibility
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4900
diff
changeset
|
748 throw OrthancException(ErrorCode_Plugin, "The ReceivedInstanceCallback has returned an invalid value"); |
4845
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
749 } |
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
750 } |
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
751 #endif |
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
752 |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
753 return TranscodeAndStore(resultPublicId, dicom, mode); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
754 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
755 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
756 ServerContext::StoreResult ServerContext::TranscodeAndStore(std::string& resultPublicId, |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
757 DicomInstanceToStore* dicom, |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
758 StoreInstanceMode mode, |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
759 bool isReconstruct) |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
760 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
761 |
3939
c205f670098e
new configuration options: BuiltinDecoderTranscoderOrder and IngestTranscoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3938
diff
changeset
|
762 if (!isIngestTranscoding_) |
3912
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
763 { |
3941
771dbd9eb3bd
class CleaningInstancesJob to share cleaning code by merge/split jobs
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3939
diff
changeset
|
764 // No automated transcoding. This was the only path in Orthanc <= 1.6.1. |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
765 return StoreAfterTranscoding(resultPublicId, *dicom, mode, isReconstruct); |
3912
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
766 } |
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
767 else |
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
768 { |
4384
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
769 // Automated transcoding of incoming DICOM instance |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
770 |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
771 bool transcode = false; |
3945
0b3256c3ee14
simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3944
diff
changeset
|
772 |
3912
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
773 DicomTransferSyntax sourceSyntax; |
4845
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
774 if (!dicom->LookupTransferSyntax(sourceSyntax) || |
3939
c205f670098e
new configuration options: BuiltinDecoderTranscoderOrder and IngestTranscoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3938
diff
changeset
|
775 sourceSyntax == ingestTransferSyntax_) |
3912
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
776 { |
4384
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
777 // Don't transcode if the incoming DICOM is already in the proper transfer syntax |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
778 transcode = false; |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
779 } |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
780 else if (!IsTranscodableTransferSyntax(sourceSyntax)) |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
781 { |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
782 // Don't try to transcode video files, this is useless (new in |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
783 // Orthanc 1.8.2). This could be accepted in the future if |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
784 // video transcoding gets implemented. |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
785 transcode = false; |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
786 } |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
787 else if (IsUncompressedTransferSyntax(sourceSyntax)) |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
788 { |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
789 // This is an uncompressed transfer syntax (new in Orthanc 1.8.2) |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
790 transcode = ingestTranscodingOfUncompressed_; |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
791 } |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
792 else |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
793 { |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
794 // This is an compressed transfer syntax (new in Orthanc 1.8.2) |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
795 transcode = ingestTranscodingOfCompressed_; |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
796 } |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
797 |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
798 if (!transcode) |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
799 { |
3912
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
800 // No transcoding |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
801 return StoreAfterTranscoding(resultPublicId, *dicom, mode, isReconstruct); |
3912
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
802 } |
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
803 else |
4384
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
804 { |
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
805 // Trancoding |
3912
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
806 std::set<DicomTransferSyntax> syntaxes; |
3939
c205f670098e
new configuration options: BuiltinDecoderTranscoderOrder and IngestTranscoding
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3938
diff
changeset
|
807 syntaxes.insert(ingestTransferSyntax_); |
4384
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
808 |
3945
0b3256c3ee14
simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3944
diff
changeset
|
809 IDicomTranscoder::DicomImage source; |
4845
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
810 source.SetExternalBuffer(dicom->GetBufferData(), dicom->GetBufferSize()); |
4384
7e0d015ad109
new configuration options IngestTranscodingOfUncompressed and IngestTranscodingOfCompressed
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4376
diff
changeset
|
811 |
3945
0b3256c3ee14
simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3944
diff
changeset
|
812 IDicomTranscoder::DicomImage transcoded; |
3951
5fe8c6d3212e
removed useless information "hasSopInstanceUidChanged"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3947
diff
changeset
|
813 if (Transcode(transcoded, source, syntaxes, true /* allow new SOP instance UID */)) |
3912
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
814 { |
3945
0b3256c3ee14
simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3944
diff
changeset
|
815 std::unique_ptr<ParsedDicomFile> tmp(transcoded.ReleaseAsParsedDicomFile()); |
0b3256c3ee14
simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3944
diff
changeset
|
816 |
4508
8f9090b137f1
Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
817 std::unique_ptr<DicomInstanceToStore> toStore(DicomInstanceToStore::CreateFromParsedDicomFile(*tmp)); |
4845
02d77189d8ba
added ReceivedInstanceCallback + sample C++ plugin
Alain Mazy <am@osimis.io>
parents:
4831
diff
changeset
|
818 toStore->SetOrigin(dicom->GetOrigin()); |
3912
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
819 |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
820 if (isReconstruct) // the initial instance to store already has its own metadata |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
821 { |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
822 toStore->CopyMetadata(dicom->GetMetadata()); |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
823 } |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
824 |
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
parents:
4984
diff
changeset
|
825 StoreResult result = StoreAfterTranscoding(resultPublicId, *toStore, mode, isReconstruct); |
3938 | 826 assert(resultPublicId == tmp->GetHasher().HashInstance()); |
827 | |
4796
94616af363ec
added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
828 return result; |
3912
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prototyping automated transcoding of incoming DICOM files
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829 } |
3945
0b3256c3ee14
simplified IDicomTranscoder
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diff
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|
830 else |
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simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
831 { |
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diff
changeset
|
832 // Cannot transcode => store the original file |
4988
8fba26292a9f
Housekeeper plugin: finalizing + integration tests ok
Alain Mazy <am@osimis.io>
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4984
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|
833 return StoreAfterTranscoding(resultPublicId, *dicom, mode, isReconstruct); |
3945
0b3256c3ee14
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|
834 } |
3912
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|
835 } |
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|
836 } |
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|
837 } |
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|
838 |
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|
839 |
1146
200fcac0deb4
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840 void ServerContext::AnswerAttachment(RestApiOutput& output, |
1700
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841 const std::string& resourceId, |
1146
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842 FileContentType content) |
226
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843 { |
232
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|
844 FileInfo attachment; |
4627
f7d5372b59b3
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diff
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|
845 int64_t revision; |
f7d5372b59b3
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diff
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|
846 if (!index_.LookupAttachment(attachment, revision, resourceId, content)) |
232
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847 { |
1700
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|
848 throw OrthancException(ErrorCode_UnknownResource); |
236 | 849 } |
4627
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diff
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|
850 else |
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diff
changeset
|
851 { |
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
parents:
4789
diff
changeset
|
852 StorageAccessor accessor(area_, storageCache_, GetMetricsRegistry()); |
4627
f7d5372b59b3
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diff
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|
853 accessor.AnswerFile(output, attachment, GetFileContentMime(content)); |
f7d5372b59b3
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changeset
|
854 } |
226
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diff
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|
855 } |
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parents:
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diff
changeset
|
856 |
8a26a8e85edf
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diff
changeset
|
857 |
1700
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
858 void ServerContext::ChangeAttachmentCompression(const std::string& resourceId, |
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diff
changeset
|
859 FileContentType attachmentType, |
f5ddbd9239dd
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diff
changeset
|
860 CompressionType compression) |
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
861 { |
f5ddbd9239dd
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diff
changeset
|
862 LOG(INFO) << "Changing compression type for attachment " |
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diff
changeset
|
863 << EnumerationToString(attachmentType) |
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diff
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|
864 << " of resource " << resourceId << " to " |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
865 << compression; |
f5ddbd9239dd
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diff
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|
866 |
f5ddbd9239dd
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diff
changeset
|
867 FileInfo attachment; |
4627
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diff
changeset
|
868 int64_t revision; |
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diff
changeset
|
869 if (!index_.LookupAttachment(attachment, revision, resourceId, attachmentType)) |
1700
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diff
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|
870 { |
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diff
changeset
|
871 throw OrthancException(ErrorCode_UnknownResource); |
f5ddbd9239dd
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diff
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|
872 } |
f5ddbd9239dd
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diff
changeset
|
873 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
874 if (attachment.GetCompressionType() == compression) |
f5ddbd9239dd
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diff
changeset
|
875 { |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
876 // Nothing to do |
f5ddbd9239dd
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
877 return; |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
878 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
879 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
880 std::string content; |
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
881 |
4792
434843934307
Added a StorageCache in the StorageAccessor
Alain Mazy <am@osimis.io>
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4789
diff
changeset
|
882 StorageAccessor accessor(area_, storageCache_, GetMetricsRegistry()); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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changeset
|
883 accessor.Read(content, attachment); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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|
884 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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changeset
|
885 FileInfo modified = accessor.Write(content.empty() ? NULL : content.c_str(), |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
886 content.size(), attachmentType, compression, storeMD5_); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
887 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
888 try |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
889 { |
4627
f7d5372b59b3
handling revisions of attachments
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4623
diff
changeset
|
890 int64_t newRevision; // ignored |
4640
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
Sebastien Jodogne <s.jodogne@gmail.com>
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4629
diff
changeset
|
891 StoreStatus status = index_.AddAttachment(newRevision, modified, resourceId, |
66109d24d26e
"ETag" headers for metadata and attachments now allow strong comparison (MD5 is included)
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diff
changeset
|
892 true, revision, modified.GetUncompressedMD5()); |
1700
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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changeset
|
893 if (status != StoreStatus_Success) |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
894 { |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
895 accessor.Remove(modified); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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|
896 throw OrthancException(ErrorCode_Database); |
f5ddbd9239dd
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diff
changeset
|
897 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
898 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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|
899 catch (OrthancException&) |
f5ddbd9239dd
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diff
changeset
|
900 { |
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New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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changeset
|
901 accessor.Remove(modified); |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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changeset
|
902 throw; |
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diff
changeset
|
903 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
904 } |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
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diff
changeset
|
905 |
f5ddbd9239dd
New URIs for attachments: ".../compress", ".../uncompress" and ".../is-compressed"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
906 |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
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4513
diff
changeset
|
907 static void InjectEmptyPixelData(Json::Value& dicomAsJson) |
5b929e6b3c36
removal of "dicom-as-json" attachments
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diff
changeset
|
908 { |
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removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
909 // This is for backward compatibility with Orthanc <= 1.9.0 |
5b929e6b3c36
removal of "dicom-as-json" attachments
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diff
changeset
|
910 Json::Value pixelData = Json::objectValue; |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
911 pixelData["Name"] = "PixelData"; |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
912 pixelData["Type"] = "Null"; |
5b929e6b3c36
removal of "dicom-as-json" attachments
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parents:
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diff
changeset
|
913 pixelData["Value"] = Json::nullValue; |
5b929e6b3c36
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Sebastien Jodogne <s.jodogne@gmail.com>
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changeset
|
914 |
5b929e6b3c36
removal of "dicom-as-json" attachments
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diff
changeset
|
915 dicomAsJson["7fe0,0010"] = pixelData; |
5b929e6b3c36
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diff
changeset
|
916 } |
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parents:
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diff
changeset
|
917 |
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diff
changeset
|
918 |
2124 | 919 void ServerContext::ReadDicomAsJson(Json::Value& result, |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
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diff
changeset
|
920 const std::string& instancePublicId, |
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ignore-length argument if retrieving DICOM tags
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changeset
|
921 const std::set<DicomTag>& ignoreTagLength) |
226
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|
922 { |
4514
5b929e6b3c36
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diff
changeset
|
923 /** |
5b929e6b3c36
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diff
changeset
|
924 * CASE 1: The DICOM file, truncated at pixel data, is available |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
925 * as an attachment (it was created either because the storage |
4666 | 926 * area does not support range reads, or if "StorageCompression" |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
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diff
changeset
|
927 * is enabled). Simply return this attachment. |
5b929e6b3c36
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diff
changeset
|
928 **/ |
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diff
changeset
|
929 |
5b929e6b3c36
removal of "dicom-as-json" attachments
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
930 FileInfo attachment; |
4629 | 931 int64_t revision; // Ignored |
4514
5b929e6b3c36
removal of "dicom-as-json" attachments
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diff
changeset
|
932 |
4627
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handling revisions of attachments
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4623
diff
changeset
|
933 if (index_.LookupAttachment(attachment, revision, instancePublicId, FileContentType_DicomUntilPixelData)) |
2409
e4045b3c9772
ignore-length argument if retrieving DICOM tags
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2382
diff
changeset
|
934 { |
4514
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removal of "dicom-as-json" attachments
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4513
diff
changeset
|
935 std::string dicom; |
4513
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936 |
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|
937 { |
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|
938 StorageAccessor accessor(area_, storageCache_, GetMetricsRegistry()); |
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939 accessor.Read(dicom, attachment); |
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940 } |
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|
941 |
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942 ParsedDicomFile parsed(dicom); |
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943 OrthancConfiguration::DefaultDicomDatasetToJson(result, parsed, ignoreTagLength); |
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944 InjectEmptyPixelData(result); |
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945 } |
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946 else |
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|
947 { |
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948 /** |
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949 * The truncated DICOM file is not stored as a standalone |
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950 * attachment. Lookup whether the pixel data offset has already |
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951 * been computed for this instance. |
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952 **/ |
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953 |
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954 bool hasPixelDataOffset; |
4519 | 955 uint64_t pixelDataOffset = 0; // dummy initialization |
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956 |
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957 { |
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958 std::string s; |
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959 if (index_.LookupMetadata(s, revision, instancePublicId, ResourceType_Instance, |
4514
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960 MetadataType_Instance_PixelDataOffset)) |
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961 { |
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962 hasPixelDataOffset = false; |
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|
963 |
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964 if (!s.empty()) |
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965 { |
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966 try |
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967 { |
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968 pixelDataOffset = boost::lexical_cast<uint64_t>(s); |
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969 hasPixelDataOffset = true; |
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970 } |
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971 catch (boost::bad_lexical_cast&) |
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972 { |
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973 } |
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974 } |
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|
975 |
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976 if (!hasPixelDataOffset) |
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977 { |
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978 LOG(ERROR) << "Metadata \"PixelDataOffset\" is corrupted for instance: " << instancePublicId; |
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979 } |
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980 } |
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981 else |
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|
982 { |
4514
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983 // This instance was created by a version of Orthanc <= 1.9.0 |
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984 hasPixelDataOffset = false; |
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985 } |
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986 } |
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987 |
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988 |
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989 if (hasPixelDataOffset && |
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990 area_.HasReadRange() && |
4627
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991 index_.LookupAttachment(attachment, revision, instancePublicId, FileContentType_Dicom) && |
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992 attachment.GetCompressionType() == CompressionType_None) |
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993 { |
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994 /** |
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995 * CASE 2: The pixel data offset is known, AND that a range read |
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996 * can be used to retrieve the truncated DICOM file. Note that |
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997 * this case cannot be used if "StorageCompression" option is |
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998 * "true". |
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999 **/ |
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1000 |
4900
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1001 std::string dicom; |
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1002 |
4519 | 1003 { |
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|
1004 StorageAccessor accessor(area_, storageCache_, GetMetricsRegistry()); |
4900
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1005 accessor.ReadStartRange(dicom, attachment.GetUuid(), FileContentType_Dicom, pixelDataOffset); |
4514
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1006 } |
4900
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1007 |
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1008 assert(dicom.size() == pixelDataOffset); |
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1009 ParsedDicomFile parsed(dicom); |
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1010 OrthancConfiguration::DefaultDicomDatasetToJson(result, parsed, ignoreTagLength); |
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1011 InjectEmptyPixelData(result); |
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1012 } |
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|
1013 else if (ignoreTagLength.empty() && |
4627
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1014 index_.LookupAttachment(attachment, revision, instancePublicId, FileContentType_DicomAsJson)) |
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1015 { |
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1016 /** |
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1017 * CASE 3: This instance was created using Orthanc <= |
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1018 * 1.9.0. Reuse the old "DICOM-as-JSON" attachment if available. |
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1019 * This is for backward compatibility: A call to |
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1020 * "/tools/invalidate-tags" or to one flavors of |
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1021 * "/.../.../reconstruct" will disable this case. |
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1022 **/ |
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1023 |
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1024 std::string dicomAsJson; |
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1025 |
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1026 { |
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|
1027 StorageAccessor accessor(area_, storageCache_, GetMetricsRegistry()); |
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1028 accessor.Read(dicomAsJson, attachment); |
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1029 } |
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1030 |
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1031 if (!Toolbox::ReadJson(result, dicomAsJson)) |
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1032 { |
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1033 throw OrthancException(ErrorCode_CorruptedFile, |
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1034 "Corrupted DICOM-as-JSON attachment of instance: " + instancePublicId); |
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1035 } |
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1036 } |
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1037 else |
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1038 { |
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1039 /** |
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1040 * CASE 4: Neither the truncated DICOM file is accessible, nor |
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1041 * the DICOM-as-JSON summary. We have to retrieve the full DICOM |
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1042 * file from the storage area. |
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1043 **/ |
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1044 |
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1045 std::string dicom; |
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1046 ReadDicom(dicom, instancePublicId); |
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1047 |
4514
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1048 ParsedDicomFile parsed(dicom); |
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1049 OrthancConfiguration::DefaultDicomDatasetToJson(result, parsed, ignoreTagLength); |
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1050 |
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1051 if (!hasPixelDataOffset) |
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1052 { |
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1053 /** |
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1054 * The pixel data offset was never computed for this |
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1055 * instance, which indicates that it was created using |
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1056 * Orthanc <= 1.9.0, or that calls to |
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1057 * "LookupPixelDataOffset()" from earlier versions of |
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1058 * Orthanc have failed. Try again this precomputation now |
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1059 * for future calls. |
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1060 **/ |
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1061 if (DicomStreamReader::LookupPixelDataOffset(pixelDataOffset, dicom) && |
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1062 pixelDataOffset < dicom.size()) |
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1063 { |
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1064 index_.OverwriteMetadata(instancePublicId, MetadataType_Instance_PixelDataOffset, |
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1065 boost::lexical_cast<std::string>(pixelDataOffset)); |
4514
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1066 |
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1067 if (!area_.HasReadRange() || |
4519 | 1068 compressionEnabled_) |
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1069 { |
4627
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1070 int64_t newRevision; |
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1071 AddAttachment(newRevision, instancePublicId, FileContentType_DicomUntilPixelData, |
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1072 dicom.empty() ? NULL: dicom.c_str(), pixelDataOffset, |
4640
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1073 false /* no old revision */, -1 /* dummy revision */, "" /* dummy MD5 */); |
4514
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1074 } |
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1075 } |
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1076 } |
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1077 } |
226
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1078 } |
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1079 } |
227
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1080 |
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1081 |
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1082 void ServerContext::ReadDicomAsJson(Json::Value& result, |
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1083 const std::string& instancePublicId) |
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1084 { |
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1085 std::set<DicomTag> ignoreTagLength; |
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1086 ReadDicomAsJson(result, instancePublicId, ignoreTagLength); |
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1087 } |
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1088 |
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1089 |
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1090 void ServerContext::ReadDicom(std::string& dicom, |
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1091 const std::string& instancePublicId) |
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1092 { |
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1093 int64_t revision; |
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1094 ReadAttachment(dicom, revision, instancePublicId, FileContentType_Dicom, true /* uncompress */); |
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1095 } |
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1096 |
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1097 void ServerContext::ReadDicomForHeader(std::string& dicom, |
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1098 const std::string& instancePublicId) |
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1099 { |
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1100 if (!ReadDicomUntilPixelData(dicom, instancePublicId)) |
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1101 { |
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1102 ReadDicom(dicom, instancePublicId); |
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1103 } |
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1104 } |
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1105 |
4511
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1106 bool ServerContext::ReadDicomUntilPixelData(std::string& dicom, |
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1107 const std::string& instancePublicId) |
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1108 { |
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1109 if (!area_.HasReadRange()) |
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1110 { |
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1111 return false; |
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1112 } |
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1113 |
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1114 FileInfo attachment; |
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1115 int64_t revision; // Ignored |
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1116 if (!index_.LookupAttachment(attachment, revision, instancePublicId, FileContentType_Dicom)) |
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1117 { |
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1118 throw OrthancException(ErrorCode_InternalError, |
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1119 "Unable to read the DICOM file of instance " + instancePublicId); |
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1120 } |
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1121 |
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1122 std::string s; |
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1123 |
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1124 if (attachment.GetCompressionType() == CompressionType_None && |
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1125 index_.LookupMetadata(s, revision, instancePublicId, ResourceType_Instance, |
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1126 MetadataType_Instance_PixelDataOffset) && |
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1127 !s.empty()) |
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1128 { |
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1129 try |
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1130 { |
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1131 uint64_t pixelDataOffset = boost::lexical_cast<uint64_t>(s); |
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1132 |
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1133 StorageAccessor accessor(area_, storageCache_, GetMetricsRegistry()); |
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1134 |
4900
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1135 accessor.ReadStartRange(dicom, attachment.GetUuid(), attachment.GetContentType(), pixelDataOffset); |
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1136 assert(dicom.size() == pixelDataOffset); |
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1137 |
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1138 return true; // Success |
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1139 } |
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1140 catch (boost::bad_lexical_cast&) |
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1141 { |
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1142 LOG(ERROR) << "Metadata \"PixelDataOffset\" is corrupted for instance: " << instancePublicId; |
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1143 } |
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1144 } |
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1145 |
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1146 return false; |
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1147 } |
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1148 |
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1149 |
2128
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1150 void ServerContext::ReadAttachment(std::string& result, |
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1151 int64_t& revision, |
2128
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1152 const std::string& instancePublicId, |
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1153 FileContentType content, |
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1154 bool uncompressIfNeeded) |
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1155 { |
232
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1156 FileInfo attachment; |
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1157 if (!index_.LookupAttachment(attachment, revision, instancePublicId, content)) |
227
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1158 { |
2956 | 1159 throw OrthancException(ErrorCode_InternalError, |
1160 "Unable to read attachment " + EnumerationToString(content) + | |
1161 " of instance " + instancePublicId); | |
227
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1162 } |
1550 | 1163 |
3175
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1164 assert(attachment.GetContentType() == content); |
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1165 |
1550 | 1166 { |
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1167 StorageAccessor accessor(area_, storageCache_, GetMetricsRegistry()); |
4509
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1168 |
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1169 if (uncompressIfNeeded) |
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1170 { |
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1171 accessor.Read(result, attachment); |
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1172 } |
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1173 else |
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1174 { |
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1175 // Do not uncompress the content of the storage area, return the |
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1176 // raw data |
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1177 accessor.ReadRaw(result, attachment); |
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1178 } |
1550 | 1179 } |
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1180 } |
285
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1181 |
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1182 |
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1183 ServerContext::DicomCacheLocker::DicomCacheLocker(ServerContext& context, |
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1184 const std::string& instancePublicId) : |
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1185 context_(context), |
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1186 instancePublicId_(instancePublicId) |
285
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1187 { |
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1188 accessor_.reset(new ParsedDicomCache::Accessor(context_.dicomCache_, instancePublicId)); |
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1189 |
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1190 if (!accessor_->IsValid()) |
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1191 { |
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1192 accessor_.reset(NULL); |
285
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1193 |
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1194 // Throttle to avoid loading several large DICOM files simultaneously |
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1195 largeDicomLocker_.reset(new Semaphore::Locker(context.largeDicomThrottler_)); |
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1196 |
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1197 std::string content; |
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1198 context_.ReadDicom(content, instancePublicId); |
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1199 |
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1200 // Release the throttle if loading "small" DICOM files (under |
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1201 // 50MB, which is an arbitrary value) |
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1202 if (content.size() < 50 * 1024 * 1024) |
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1203 { |
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1204 largeDicomLocker_.reset(NULL); |
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1205 } |
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1206 |
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Refactoring and improvements to the cache of DICOM files in ServerContext
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1207 dicom_.reset(new ParsedDicomFile(content)); |
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1208 dicomSize_ = content.size(); |
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1209 } |
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1210 |
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1211 assert(accessor_.get() != NULL || |
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Refactoring and improvements to the cache of DICOM files in ServerContext
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1212 dicom_.get() != NULL); |
778
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1213 } |
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1214 |
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1215 |
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changeset
|
1216 ServerContext::DicomCacheLocker::~DicomCacheLocker() |
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1217 { |
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1218 if (dicom_.get() != NULL) |
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1219 { |
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Refactoring and improvements to the cache of DICOM files in ServerContext
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1220 try |
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Refactoring and improvements to the cache of DICOM files in ServerContext
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1221 { |
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1222 context_.dicomCache_.Acquire(instancePublicId_, dicom_.release(), dicomSize_); |
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1223 context_.PublishDicomCacheMetrics(); |
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Refactoring and improvements to the cache of DICOM files in ServerContext
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1224 } |
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1225 catch (OrthancException&) |
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1226 { |
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1227 } |
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Refactoring and improvements to the cache of DICOM files in ServerContext
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1228 } |
285
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1229 } |
304 | 1230 |
1231 | |
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1232 ParsedDicomFile& ServerContext::DicomCacheLocker::GetDicom() const |
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1233 { |
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1234 if (dicom_.get() != NULL) |
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1235 { |
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1236 return *dicom_; |
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1237 } |
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1238 else |
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Refactoring and improvements to the cache of DICOM files in ServerContext
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1239 { |
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1240 assert(accessor_.get() != NULL); |
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1241 return accessor_->GetDicom(); |
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1242 } |
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1243 } |
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1244 |
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1245 |
695
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|
1246 void ServerContext::SetStoreMD5ForAttachments(bool storeMD5) |
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1247 { |
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|
1248 LOG(INFO) << "Storing MD5 for attachments: " << (storeMD5 ? "yes" : "no"); |
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1249 storeMD5_ = storeMD5; |
695
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1250 } |
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|
1251 |
699
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|
1252 |
4627
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|
1253 bool ServerContext::AddAttachment(int64_t& newRevision, |
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|
1254 const std::string& resourceId, |
699
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|
1255 FileContentType attachmentType, |
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|
1256 const void* data, |
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1257 size_t size, |
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1258 bool hasOldRevision, |
4640
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|
1259 int64_t oldRevision, |
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|
1260 const std::string& oldMD5) |
699
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|
1261 { |
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|
1262 LOG(INFO) << "Adding attachment " << EnumerationToString(attachmentType) << " to resource " << resourceId; |
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1263 |
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1264 // TODO Should we use "gzip" instead? |
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1265 CompressionType compression = (compressionEnabled_ ? CompressionType_ZlibWithSize : CompressionType_None); |
699
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1266 |
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diff
changeset
|
1267 StorageAccessor accessor(area_, storageCache_, GetMetricsRegistry()); |
1549
e5e975e9b738
refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1548
diff
changeset
|
1268 FileInfo attachment = accessor.Write(data, size, attachmentType, compression, storeMD5_); |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1269 |
4752
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1270 try |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1271 { |
4752
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1272 StoreStatus status = index_.AddAttachment( |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1273 newRevision, attachment, resourceId, hasOldRevision, oldRevision, oldMD5); |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1274 if (status != StoreStatus_Success) |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1275 { |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1276 accessor.Remove(attachment); |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1277 return false; |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1278 } |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1279 else |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1280 { |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1281 return true; |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1282 } |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1283 } |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1284 catch (OrthancException&) |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1285 { |
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1286 // Fixed in Orthanc 1.9.6 |
1549
e5e975e9b738
refactoring and simplification of StorageAccessor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1548
diff
changeset
|
1287 accessor.Remove(attachment); |
4752
2f35e6b765e5
Fix orphaned attachments if bad revision number is provided
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4694
diff
changeset
|
1288 throw; |
699
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1289 } |
2929e17f8447
add attachments to resources
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
697
diff
changeset
|
1290 } |
1145
0479d02c6778
Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1134
diff
changeset
|
1291 |
0479d02c6778
Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1134
diff
changeset
|
1292 |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4677
diff
changeset
|
1293 bool ServerContext::DeleteResource(Json::Value& remainingAncestor, |
1145
0479d02c6778
Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1134
diff
changeset
|
1294 const std::string& uuid, |
0479d02c6778
Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1134
diff
changeset
|
1295 ResourceType expectedType) |
0479d02c6778
Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1134
diff
changeset
|
1296 { |
2507 | 1297 if (expectedType == ResourceType_Instance) |
1298 { | |
1299 // remove the file from the DicomCache | |
1300 dicomCache_.Invalidate(uuid); | |
4457
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
1301 PublishDicomCacheMetrics(); |
2507 | 1302 } |
1303 | |
4694
da1edb7d6332
"/tools/bulk-delete" to delete a group of multiple, unrelated resources at once
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4677
diff
changeset
|
1304 return index_.DeleteResource(remainingAncestor, uuid, expectedType); |
1145
0479d02c6778
Plugins can retrieve the path to Orthanc and to its configuration file
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1134
diff
changeset
|
1305 } |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1165
diff
changeset
|
1306 |
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1165
diff
changeset
|
1307 |
1198 | 1308 void ServerContext::SignalChange(const ServerIndexChange& change) |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1165
diff
changeset
|
1309 { |
4457
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
1310 if (change.GetResourceType() == ResourceType_Instance && |
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
1311 change.GetChangeType() == ChangeType_Deleted) |
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
1312 { |
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
1313 dicomCache_.Invalidate(change.GetPublicId()); |
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
1314 PublishDicomCacheMetrics(); |
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
1315 } |
789676a8c96a
Refactoring and improvements to the cache of DICOM files in ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4437
diff
changeset
|
1316 |
1436
0a3e3be59094
uncoupling of SignalChange for Lua scripts
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1434
diff
changeset
|
1317 pendingChanges_.Enqueue(change.Clone()); |
1189
6b9b02a16e99
NewChildInstance change type
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1165
diff
changeset
|
1318 } |
1232
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1319 |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1320 |
2136
dd609a99d39a
uniformization of the macro naming
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2135
diff
changeset
|
1321 #if ORTHANC_ENABLE_PLUGINS == 1 |
1434
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1322 void ServerContext::SetPlugins(OrthancPlugins& plugins) |
1232
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1323 { |
3947
cf6eb4fc6841
fix issue 179: use a shared mutex to avoid deadlock in python plugins
Alain Mazy <alain@mazy.be>
parents:
3945
diff
changeset
|
1324 boost::unique_lock<boost::shared_mutex> lock(listenersMutex_); |
1459 | 1325 |
1434
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1326 plugins_ = &plugins; |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1327 |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1328 // TODO REFACTOR THIS |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1329 listeners_.clear(); |
2738
3a55b77339ff
fix deadlock in Lua scripts
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2716
diff
changeset
|
1330 listeners_.push_back(ServerListener(luaListener_, "Lua")); |
1434
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1331 listeners_.push_back(ServerListener(plugins, "plugin")); |
1232
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1332 } |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1333 |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1334 |
1434
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1335 void ServerContext::ResetPlugins() |
1232
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1336 { |
3947
cf6eb4fc6841
fix issue 179: use a shared mutex to avoid deadlock in python plugins
Alain Mazy <alain@mazy.be>
parents:
3945
diff
changeset
|
1337 boost::unique_lock<boost::shared_mutex> lock(listenersMutex_); |
1459 | 1338 |
1434
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1339 plugins_ = NULL; |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1340 |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1341 // TODO REFACTOR THIS |
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1342 listeners_.clear(); |
2738
3a55b77339ff
fix deadlock in Lua scripts
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2716
diff
changeset
|
1343 listeners_.push_back(ServerListener(luaListener_, "Lua")); |
1232
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1344 } |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1345 |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1346 |
1434
f9cd40166269
refactoring of OrthancPlugins, improvement in ServeFolders
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1433
diff
changeset
|
1347 const OrthancPlugins& ServerContext::GetPlugins() const |
1232
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1348 { |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1349 if (HasPlugins()) |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1350 { |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1351 return *plugins_; |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1352 } |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1353 else |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1354 { |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1355 throw OrthancException(ErrorCode_InternalError); |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1356 } |
f1c01451a8ee
Introspection of plugins, Plugins can extend Orthanc Explorer with custom JavaScript
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1198
diff
changeset
|
1357 } |
1632
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
1358 |
1741
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1359 OrthancPlugins& ServerContext::GetPlugins() |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1360 { |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1361 if (HasPlugins()) |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1362 { |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1363 return *plugins_; |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1364 } |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1365 else |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1366 { |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1367 throw OrthancException(ErrorCode_InternalError); |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1368 } |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1369 } |
06addfcd1d4c
OrthancStarted and OrthancStopped events in plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1701
diff
changeset
|
1370 |
1632
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
1371 #endif |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
1372 |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
1373 |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
1374 bool ServerContext::HasPlugins() const |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
1375 { |
2136
dd609a99d39a
uniformization of the macro naming
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2135
diff
changeset
|
1376 #if ORTHANC_ENABLE_PLUGINS == 1 |
1632
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
1377 return (plugins_ != NULL); |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
1378 #else |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
1379 return false; |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
1380 #endif |
eb8fbcf008b5
fix build with plugins disabled
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1582
diff
changeset
|
1381 } |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
1382 |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
1383 |
4978
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
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1384 void ServerContext::Apply(ILookupVisitor& visitor, |
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1385 const DatabaseLookup& lookup, |
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|
1386 ResourceType queryLevel, |
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
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diff
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|
1387 size_t since, |
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
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diff
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|
1388 size_t limit) |
4196
37310bb1cd30
Fix handling of "ModalitiesInStudy" (0008,0061) in C-FIND and "/tools/find"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
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|
1389 { |
3679
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|
1390 unsigned int databaseLimit = (queryLevel == ResourceType_Instance ? |
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|
1391 limitFindInstances_ : limitFindResults_); |
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|
1392 |
1757
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diff
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|
1393 std::vector<std::string> resources, instances; |
4978
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
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|
1394 const DicomTagConstraint* dicomModalitiesConstraint = NULL; |
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
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|
1395 |
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Alain Mazy <am@osimis.io>
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diff
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|
1396 bool hasModalitiesInStudyLookup = (queryLevel == ResourceType_Study && |
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
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|
1397 lookup.GetConstraint(dicomModalitiesConstraint, DICOM_TAG_MODALITIES_IN_STUDY) && |
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Alain Mazy <am@osimis.io>
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|
1398 ((dicomModalitiesConstraint->GetConstraintType() == ConstraintType_Equal && !dicomModalitiesConstraint->GetValue().empty()) || |
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
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|
1399 (dicomModalitiesConstraint->GetConstraintType() == ConstraintType_List && !dicomModalitiesConstraint->GetValues().empty()))); |
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
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|
1400 |
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
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|
1401 std::unique_ptr<DatabaseLookup> fastLookup(lookup.Clone()); |
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
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1402 |
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|
1403 if (hasModalitiesInStudyLookup) |
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
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|
1404 { |
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diff
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|
1405 fastLookup->RemoveConstraint(DICOM_TAG_MODALITIES_IN_STUDY); |
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
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1406 } |
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1407 |
3204
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|
1408 { |
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|
1409 const size_t lookupLimit = (databaseLimit == 0 ? 0 : databaseLimit + 1); |
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
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|
1410 GetIndex().ApplyLookupResources(resources, &instances, *fastLookup, queryLevel, lookupLimit); |
3204
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1411 } |
3025
039a9d262d64
preparing to speed up find in databases
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3021
diff
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|
1412 |
3033
5da6d1063d8f
effectively replacing LookupResource by DatabaseLookup in searches
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3031
diff
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|
1413 bool complete = (databaseLimit == 0 || |
3204
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fix incorrect "too many results"
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1414 resources.size() <= databaseLimit); |
1757
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diff
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|
1415 |
3005
8265a6b56100
DicomMap::FromDicomAsJson
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3003
diff
changeset
|
1416 LOG(INFO) << "Number of candidate resources after fast DB filtering on main DICOM tags: " << resources.size(); |
3003
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
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|
1417 |
3679
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|
1418 /** |
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1419 * "resources" contains the Orthanc ID of the resource at level |
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|
1420 * "queryLevel", "instances" contains one the Orthanc ID of one |
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1421 * sample instance from this resource. |
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|
1422 **/ |
1757
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ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1423 assert(resources.size() == instances.size()); |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1424 |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2965
diff
changeset
|
1425 size_t countResults = 0; |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
1426 size_t skipped = 0; |
3015
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Sebastien Jodogne <s.jodogne@gmail.com>
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|
1427 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1428 const bool isDicomAsJsonNeeded = visitor.IsDicomAsJsonNeeded(); |
3012
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Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1429 |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1430 for (size_t i = 0; i < instances.size(); i++) |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1431 { |
3012
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1432 // Optimization in Orthanc 1.5.1 - Don't read the full JSON from |
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Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
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diff
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|
1433 // the disk if only "main DICOM tags" are to be returned |
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Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1434 |
3712
2a170a8f1faf
replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3679
diff
changeset
|
1435 std::unique_ptr<Json::Value> dicomAsJson; |
3012
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diff
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|
1436 |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1437 bool hasOnlyMainDicomTags; |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1438 DicomMap dicom; |
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
1439 DicomMap allMainDicomTagsFromDB; |
3012
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|
1440 |
3677
4182cde57afb
refactoring FindStorageAccessMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1441 if (findStorageAccessMode_ == FindStorageAccessMode_DatabaseOnly || |
4182cde57afb
refactoring FindStorageAccessMode
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3640
diff
changeset
|
1442 findStorageAccessMode_ == FindStorageAccessMode_DiskOnAnswer || |
4978
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
1443 fastLookup->HasOnlyMainDicomTags()) |
3012
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diff
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|
1444 { |
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diff
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|
1445 // Case (1): The main DICOM tags, as stored in the database, |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1446 // are sufficient to look for match |
3015
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1447 |
4944
f377d5643538
new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
parents:
4941
diff
changeset
|
1448 if (!GetIndex().GetAllMainDicomTags(allMainDicomTagsFromDB, instances[i])) |
3015
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1449 { |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1450 // The instance has been removed during the execution of the |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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|
1451 // lookup, ignore it |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
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|
1452 continue; |
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diff
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|
1453 } |
3679
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|
1454 |
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diff
changeset
|
1455 // New in Orthanc 1.6.0: Only keep the main DICOM tags at the |
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changeset
|
1456 // level of interest for the query |
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changeset
|
1457 switch (queryLevel) |
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|
1458 { |
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|
1459 // WARNING: Don't reorder cases below, and don't add "break" |
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diff
changeset
|
1460 case ResourceType_Instance: |
4937
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Alain Mazy <am@osimis.io>
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diff
changeset
|
1461 dicom.MergeMainDicomTags(allMainDicomTagsFromDB, ResourceType_Instance); |
3679
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|
1462 |
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diff
changeset
|
1463 case ResourceType_Series: |
4937
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
changeset
|
1464 dicom.MergeMainDicomTags(allMainDicomTagsFromDB, ResourceType_Series); |
3679
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|
1465 |
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changeset
|
1466 case ResourceType_Study: |
4937
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Alain Mazy <am@osimis.io>
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diff
changeset
|
1467 dicom.MergeMainDicomTags(allMainDicomTagsFromDB, ResourceType_Study); |
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|
1468 |
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changeset
|
1469 case ResourceType_Patient: |
4937
3f9b9865c8cc
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diff
changeset
|
1470 dicom.MergeMainDicomTags(allMainDicomTagsFromDB, ResourceType_Patient); |
3679
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|
1471 break; |
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|
1472 |
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changeset
|
1473 default: |
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changeset
|
1474 throw OrthancException(ErrorCode_InternalError); |
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|
1475 } |
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|
1476 |
3012
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diff
changeset
|
1477 hasOnlyMainDicomTags = true; |
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|
1478 } |
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changeset
|
1479 else |
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changeset
|
1480 { |
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diff
changeset
|
1481 // Case (2): Need to read the "DICOM-as-JSON" attachment from |
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diff
changeset
|
1482 // the storage area |
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diff
changeset
|
1483 dicomAsJson.reset(new Json::Value); |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1484 ReadDicomAsJson(*dicomAsJson, instances[i]); |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1485 |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1486 dicom.FromDicomAsJson(*dicomAsJson); |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1487 |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1488 // This map contains the entire JSON, i.e. more than the main DICOM tags |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1489 hasOnlyMainDicomTags = false; |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1490 } |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
1491 |
4978
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1492 if (fastLookup->IsMatch(dicom)) |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
1493 { |
4978
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Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1494 bool isMatch = true; |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
1495 |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1496 if (hasModalitiesInStudyLookup) |
2304
563bf878407a
Argument "Since" in URI "/tools/find" (related to issue 53)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2244
diff
changeset
|
1497 { |
4978
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1498 std::set<DicomTag> requestedTags; |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1499 requestedTags.insert(DICOM_TAG_MODALITIES_IN_STUDY); |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1500 ExpandedResource resource; |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1501 ComputeStudyTags(resource, *this, resources[i], requestedTags); |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1502 |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1503 std::vector<std::string> modalities; |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1504 Toolbox::TokenizeString(modalities, resource.tags_.GetValue(DICOM_TAG_MODALITIES_IN_STUDY).GetContent(), '\\'); |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1505 bool hasAtLeastOneModalityMatching = false; |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1506 for (size_t m = 0; m < modalities.size(); m++) |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1507 { |
4978
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1508 hasAtLeastOneModalityMatching |= dicomModalitiesConstraint->IsMatch(modalities[m]); |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1509 } |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1510 |
4978
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1511 isMatch = isMatch && hasAtLeastOneModalityMatching; |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1512 // copy the value of ModalitiesInStudy such that it can be reused to build the answer |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1513 allMainDicomTagsFromDB.SetValue(DICOM_TAG_MODALITIES_IN_STUDY, resource.tags_.GetValue(DICOM_TAG_MODALITIES_IN_STUDY)); |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1514 } |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1515 |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
1516 if (isMatch) |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1517 { |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1518 if (skipped < since) |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1519 { |
4978
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1520 skipped++; |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1521 } |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1522 else if (limit != 0 && |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1523 countResults >= limit) |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1524 { |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1525 // Too many results, don't mark as complete |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1526 complete = false; |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1527 break; |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1528 } |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1529 else |
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1530 { |
4978
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1531 if ((findStorageAccessMode_ == FindStorageAccessMode_DiskOnLookupAndAnswer || |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1532 findStorageAccessMode_ == FindStorageAccessMode_DiskOnAnswer) && |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1533 dicomAsJson.get() == NULL && |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1534 isDicomAsJsonNeeded) |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1535 { |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1536 dicomAsJson.reset(new Json::Value); |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1537 ReadDicomAsJson(*dicomAsJson, instances[i]); |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1538 } |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1539 |
4978
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1540 if (hasOnlyMainDicomTags) |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1541 { |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1542 // This is Case (1): The variable "dicom" only contains the main DICOM tags |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1543 visitor.Visit(resources[i], instances[i], allMainDicomTagsFromDB, dicomAsJson.get()); |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1544 } |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1545 else |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1546 { |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1547 // Remove the non-main DICOM tags from "dicom" if Case (2) |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1548 // was used, for consistency with Case (1) |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1549 |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1550 DicomMap mainDicomTags; |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1551 mainDicomTags.ExtractMainDicomTags(dicom); |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1552 visitor.Visit(resources[i], instances[i], mainDicomTags, dicomAsJson.get()); |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1553 } |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1554 |
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
parents:
4977
diff
changeset
|
1555 countResults ++; |
3012
af1530b45290
Optimization: On finds, do not read JSON (disk) if main DICOM tags (DB) are sufficient
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3005
diff
changeset
|
1556 } |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
1557 } |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
1558 } |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
1559 } |
3001
7695a9c81099
refactoring /tools/find using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
2965
diff
changeset
|
1560 |
3003
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
1561 if (complete) |
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
1562 { |
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
1563 visitor.MarkAsComplete(); |
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
1564 } |
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
1565 |
5ae3ff2398e9
refactoring OrthancFindRequestHandler using LookupResource::IVisitor
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3001
diff
changeset
|
1566 LOG(INFO) << "Number of matching resources: " << countResults; |
1757
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
1567 } |
98abb8d7f905
ServerContext::Apply lookup
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
1741
diff
changeset
|
1568 |
3015
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1569 bool ServerContext::LookupOrReconstructMetadata(std::string& target, |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1570 const std::string& publicId, |
4460
6831de40acd9
New metadata automatically computed at the series level: "RemoteAET"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4457
diff
changeset
|
1571 ResourceType level, |
3015
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1572 MetadataType metadata) |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1573 { |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1574 // This is a backwards-compatibility function, that can |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1575 // reconstruct metadata that were not generated by an older |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1576 // release of Orthanc |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1577 |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1578 if (metadata == MetadataType_Instance_SopClassUid || |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1579 metadata == MetadataType_Instance_TransferSyntax) |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1580 { |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4607
diff
changeset
|
1581 int64_t revision; // Ignored |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4607
diff
changeset
|
1582 if (index_.LookupMetadata(target, revision, publicId, level, metadata)) |
3015
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1583 { |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1584 return true; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1585 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
1586 else |
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On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
1587 { |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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diff
changeset
|
1588 // These metadata are mandatory in DICOM instances, and were |
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On C-FIND, avoid accessing the storage area whenever possible
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diff
changeset
|
1589 // introduced in Orthanc 1.2.0. The fact that |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
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|
1590 // "LookupMetadata()" has failed indicates that this database |
abe49ca61cd5
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1591 // comes from an older release of Orthanc. |
abe49ca61cd5
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diff
changeset
|
1592 |
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diff
changeset
|
1593 DicomTag tag(0, 0); |
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parents:
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diff
changeset
|
1594 |
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diff
changeset
|
1595 switch (metadata) |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1596 { |
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diff
changeset
|
1597 case MetadataType_Instance_SopClassUid: |
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diff
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|
1598 tag = DICOM_TAG_SOP_CLASS_UID; |
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On C-FIND, avoid accessing the storage area whenever possible
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diff
changeset
|
1599 break; |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1600 |
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diff
changeset
|
1601 case MetadataType_Instance_TransferSyntax: |
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1602 tag = DICOM_TAG_TRANSFER_SYNTAX_UID; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1603 break; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
1604 |
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On C-FIND, avoid accessing the storage area whenever possible
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diff
changeset
|
1605 default: |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1606 throw OrthancException(ErrorCode_InternalError); |
abe49ca61cd5
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diff
changeset
|
1607 } |
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On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
1608 |
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On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
1609 Json::Value dicomAsJson; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1610 ReadDicomAsJson(dicomAsJson, publicId); |
abe49ca61cd5
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Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1611 |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1612 DicomMap tags; |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1613 tags.FromDicomAsJson(dicomAsJson); |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1614 |
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On C-FIND, avoid accessing the storage area whenever possible
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diff
changeset
|
1615 const DicomValue* value = tags.TestAndGetValue(tag); |
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diff
changeset
|
1616 |
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diff
changeset
|
1617 if (value != NULL && |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1618 !value->IsNull() && |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1619 !value->IsBinary()) |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1620 { |
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On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
1621 target = value->GetContent(); |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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diff
changeset
|
1622 |
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On C-FIND, avoid accessing the storage area whenever possible
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diff
changeset
|
1623 // Store for reuse |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1624 index_.OverwriteMetadata(publicId, metadata, target); |
3015
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On C-FIND, avoid accessing the storage area whenever possible
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diff
changeset
|
1625 return true; |
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On C-FIND, avoid accessing the storage area whenever possible
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diff
changeset
|
1626 } |
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parents:
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diff
changeset
|
1627 else |
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1628 { |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1629 // Should never happen |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1630 return false; |
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parents:
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diff
changeset
|
1631 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1632 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1633 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
1634 else |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1635 { |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1636 // No backward |
4623
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4607
diff
changeset
|
1637 int64_t revision; // Ignored |
95ffe3b6ef7c
handling of revisions for metadata
Sebastien Jodogne <s.jodogne@gmail.com>
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4607
diff
changeset
|
1638 return index_.LookupMetadata(target, revision, publicId, level, metadata); |
3015
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3012
diff
changeset
|
1639 } |
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On C-FIND, avoid accessing the storage area whenever possible
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1640 } |
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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parents:
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diff
changeset
|
1641 |
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On C-FIND, avoid accessing the storage area whenever possible
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diff
changeset
|
1642 |
2626 | 1643 void ServerContext::AddChildInstances(SetOfInstancesJob& job, |
1644 const std::string& publicId) | |
1645 { | |
1646 std::list<std::string> instances; | |
1647 GetIndex().GetChildInstances(instances, publicId); | |
1648 | |
1649 job.Reserve(job.GetInstancesCount() + instances.size()); | |
1650 | |
1651 for (std::list<std::string>::const_iterator | |
1652 it = instances.begin(); it != instances.end(); ++it) | |
1653 { | |
1654 job.AddInstance(*it); | |
1655 } | |
1656 } | |
2940
4767d36679ed
refactoring access to Orthanc configuration
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diff
changeset
|
1657 |
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refactoring access to Orthanc configuration
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diff
changeset
|
1658 |
4767d36679ed
refactoring access to Orthanc configuration
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diff
changeset
|
1659 void ServerContext::SignalUpdatedModalities() |
4767d36679ed
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diff
changeset
|
1660 { |
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refactoring access to Orthanc configuration
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parents:
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diff
changeset
|
1661 #if ORTHANC_ENABLE_PLUGINS == 1 |
4767d36679ed
refactoring access to Orthanc configuration
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parents:
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diff
changeset
|
1662 if (HasPlugins()) |
4767d36679ed
refactoring access to Orthanc configuration
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diff
changeset
|
1663 { |
4767d36679ed
refactoring access to Orthanc configuration
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parents:
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diff
changeset
|
1664 GetPlugins().SignalUpdatedModalities(); |
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refactoring access to Orthanc configuration
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diff
changeset
|
1665 } |
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refactoring access to Orthanc configuration
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parents:
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diff
changeset
|
1666 #endif |
4767d36679ed
refactoring access to Orthanc configuration
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parents:
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diff
changeset
|
1667 } |
4767d36679ed
refactoring access to Orthanc configuration
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diff
changeset
|
1668 |
4767d36679ed
refactoring access to Orthanc configuration
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diff
changeset
|
1669 |
4767d36679ed
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diff
changeset
|
1670 void ServerContext::SignalUpdatedPeers() |
4767d36679ed
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diff
changeset
|
1671 { |
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refactoring access to Orthanc configuration
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parents:
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diff
changeset
|
1672 #if ORTHANC_ENABLE_PLUGINS == 1 |
4767d36679ed
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diff
changeset
|
1673 if (HasPlugins()) |
4767d36679ed
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diff
changeset
|
1674 { |
4767d36679ed
refactoring access to Orthanc configuration
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parents:
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diff
changeset
|
1675 GetPlugins().SignalUpdatedPeers(); |
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diff
changeset
|
1676 } |
4767d36679ed
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parents:
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diff
changeset
|
1677 #endif |
4767d36679ed
refactoring access to Orthanc configuration
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diff
changeset
|
1678 } |
3660
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1679 |
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1680 |
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1681 IStorageCommitmentFactory::ILookupHandler* |
f159b731c47d
IStorageCommitmentFactory
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1682 ServerContext::CreateStorageCommitment(const std::string& jobId, |
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1683 const std::string& transactionUid, |
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1684 const std::vector<std::string>& sopClassUids, |
3662
d8371b4302ff
OrthancPluginRegisterStorageCommitmentScpCallback()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1685 const std::vector<std::string>& sopInstanceUids, |
d8371b4302ff
OrthancPluginRegisterStorageCommitmentScpCallback()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1686 const std::string& remoteAet, |
d8371b4302ff
OrthancPluginRegisterStorageCommitmentScpCallback()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1687 const std::string& calledAet) |
3660
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1688 { |
f159b731c47d
IStorageCommitmentFactory
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parents:
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diff
changeset
|
1689 #if ORTHANC_ENABLE_PLUGINS == 1 |
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1690 if (HasPlugins()) |
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1691 { |
3662
d8371b4302ff
OrthancPluginRegisterStorageCommitmentScpCallback()
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1692 return GetPlugins().CreateStorageCommitment( |
d8371b4302ff
OrthancPluginRegisterStorageCommitmentScpCallback()
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diff
changeset
|
1693 jobId, transactionUid, sopClassUids, sopInstanceUids, remoteAet, calledAet); |
3660
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1694 } |
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1695 #endif |
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1696 |
f159b731c47d
IStorageCommitmentFactory
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diff
changeset
|
1697 return NULL; |
f159b731c47d
IStorageCommitmentFactory
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parents:
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diff
changeset
|
1698 } |
3894
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1699 |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
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diff
changeset
|
1700 |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1701 ImageAccessor* ServerContext::DecodeDicomFrame(const std::string& publicId, |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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diff
changeset
|
1702 unsigned int frameIndex) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
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parents:
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diff
changeset
|
1703 { |
3931
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1704 if (builtinDecoderTranscoderOrder_ == BuiltinDecoderTranscoderOrder_Before) |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1705 { |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1706 // Use Orthanc's built-in decoder, using the cache to speed-up |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1707 // things on multi-frame images |
4265
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1708 |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1709 std::unique_ptr<ImageAccessor> decoded; |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1710 try |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1711 { |
4274 | 1712 ServerContext::DicomCacheLocker locker(*this, publicId); |
4265
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1713 decoded.reset(locker.GetDicom().DecodeFrame(frameIndex)); |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1714 } |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1715 catch (OrthancException& e) |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1716 { |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1717 } |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1718 |
3931
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1719 if (decoded.get() != NULL) |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1720 { |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1721 return decoded.release(); |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1722 } |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1723 } |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1724 |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1725 #if ORTHANC_ENABLE_PLUGINS == 1 |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1726 if (HasPlugins() && |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1727 GetPlugins().HasCustomImageDecoder()) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1728 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1729 // TODO: Store the raw buffer in the DicomCacheLocker |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1730 std::string dicomContent; |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1731 ReadDicom(dicomContent, publicId); |
4265
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1732 |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1733 std::unique_ptr<ImageAccessor> decoded; |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1734 try |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1735 { |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1736 decoded.reset(GetPlugins().Decode(dicomContent.c_str(), dicomContent.size(), frameIndex)); |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1737 } |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1738 catch (OrthancException& e) |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1739 { |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1740 } |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1741 |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1742 if (decoded.get() != NULL) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1743 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1744 return decoded.release(); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1745 } |
3931
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1746 else if (builtinDecoderTranscoderOrder_ == BuiltinDecoderTranscoderOrder_After) |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1747 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1748 LOG(INFO) << "The installed image decoding plugins cannot handle an image, " |
3930
b99acc213937
transcoder plugins and GDCM transcoding are working
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3928
diff
changeset
|
1749 << "fallback to the built-in DCMTK decoder"; |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1750 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1751 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1752 #endif |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1753 |
3931
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1754 if (builtinDecoderTranscoderOrder_ == BuiltinDecoderTranscoderOrder_After) |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1755 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1756 ServerContext::DicomCacheLocker locker(*this, publicId); |
4203
4d42408da117
improving const-correctness in ParsedDicomFile
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4196
diff
changeset
|
1757 return locker.GetDicom().DecodeFrame(frameIndex); |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1758 } |
3931
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1759 else |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1760 { |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1761 return NULL; // Built-in decoder is disabled |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1762 } |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1763 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1764 |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1765 |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1766 ImageAccessor* ServerContext::DecodeDicomFrame(const DicomInstanceToStore& dicom, |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1767 unsigned int frameIndex) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1768 { |
3931
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1769 if (builtinDecoderTranscoderOrder_ == BuiltinDecoderTranscoderOrder_Before) |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1770 { |
4265
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1771 std::unique_ptr<ImageAccessor> decoded; |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1772 try |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1773 { |
4507
b4c58795f3a8
widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4506
diff
changeset
|
1774 decoded.reset(dicom.DecodeFrame(frameIndex)); |
4265
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1775 } |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1776 catch (OrthancException& e) |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1777 { |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1778 } |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1779 |
3931
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1780 if (decoded.get() != NULL) |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1781 { |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1782 return decoded.release(); |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1783 } |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1784 } |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1785 |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1786 #if ORTHANC_ENABLE_PLUGINS == 1 |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1787 if (HasPlugins() && |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1788 GetPlugins().HasCustomImageDecoder()) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1789 { |
4265
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1790 std::unique_ptr<ImageAccessor> decoded; |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1791 try |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1792 { |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1793 decoded.reset(GetPlugins().Decode(dicom.GetBufferData(), dicom.GetBufferSize(), frameIndex)); |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1794 } |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1795 catch (OrthancException& e) |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1796 { |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1797 } |
f9eaf14d3d19
Fix decoding sequence if "BuiltinDecoderTranscoderOrder" is "Before"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4218
diff
changeset
|
1798 |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1799 if (decoded.get() != NULL) |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1800 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1801 return decoded.release(); |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1802 } |
3931
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1803 else if (builtinDecoderTranscoderOrder_ == BuiltinDecoderTranscoderOrder_After) |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1804 { |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1805 LOG(INFO) << "The installed image decoding plugins cannot handle an image, " |
3930
b99acc213937
transcoder plugins and GDCM transcoding are working
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3928
diff
changeset
|
1806 << "fallback to the built-in DCMTK decoder"; |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1807 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1808 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1809 #endif |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1810 |
3931
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new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1811 if (builtinDecoderTranscoderOrder_ == BuiltinDecoderTranscoderOrder_After) |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1812 { |
4507
b4c58795f3a8
widening the use of DicomTransferSyntax enum
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4506
diff
changeset
|
1813 return dicom.DecodeFrame(frameIndex); |
3931
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1814 } |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1815 else |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1816 { |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1817 return NULL; |
e6606d3ec892
new configuration option: BuiltinDecoderTranscoderOrder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3930
diff
changeset
|
1818 } |
3928
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1819 } |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1820 |
4cdc875510d1
ServerContext::DecodeDicomFrame()
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3913
diff
changeset
|
1821 |
3980
e42f5445d20d
Fix decoding of DICOM images for plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3951
diff
changeset
|
1822 ImageAccessor* ServerContext::DecodeDicomFrame(const void* dicom, |
e42f5445d20d
Fix decoding of DICOM images for plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3951
diff
changeset
|
1823 size_t size, |
e42f5445d20d
Fix decoding of DICOM images for plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3951
diff
changeset
|
1824 unsigned int frameIndex) |
e42f5445d20d
Fix decoding of DICOM images for plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3951
diff
changeset
|
1825 { |
4508
8f9090b137f1
Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
1826 std::unique_ptr<DicomInstanceToStore> instance(DicomInstanceToStore::CreateFromBuffer(dicom, size)); |
8f9090b137f1
Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4507
diff
changeset
|
1827 return DecodeDicomFrame(*instance, frameIndex); |
3980
e42f5445d20d
Fix decoding of DICOM images for plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3951
diff
changeset
|
1828 } |
e42f5445d20d
Fix decoding of DICOM images for plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3951
diff
changeset
|
1829 |
e42f5445d20d
Fix decoding of DICOM images for plugins
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3951
diff
changeset
|
1830 |
3894
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1831 void ServerContext::StoreWithTranscoding(std::string& sopClassUid, |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1832 std::string& sopInstanceUid, |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1833 DicomStoreUserConnection& connection, |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1834 const std::string& dicom, |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1835 bool hasMoveOriginator, |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1836 const std::string& moveOriginatorAet, |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1837 uint16_t moveOriginatorId) |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1838 { |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1839 const void* data = dicom.empty() ? NULL : dicom.c_str(); |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1840 |
3911
0ef7f4528be2
renamed option TranscodingEnabled to TranscodeDicomProtocol
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3910
diff
changeset
|
1841 if (!transcodeDicomProtocol_ || |
3894
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1842 !connection.GetParameters().GetRemoteModality().IsTranscodingAllowed()) |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1843 { |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1844 connection.Store(sopClassUid, sopInstanceUid, data, dicom.size(), |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1845 hasMoveOriginator, moveOriginatorAet, moveOriginatorId); |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
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diff
changeset
|
1846 } |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1847 else |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3839
diff
changeset
|
1848 { |
4465
fe774d8e904b
New configuration option: "DicomScuPreferredTransferSyntax" to control transcoding in C-STORE SCU
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4460
diff
changeset
|
1849 connection.Transcode(sopClassUid, sopInstanceUid, *this, data, dicom.size(), preferredTransferSyntax_, |
3912
7610af1532c3
prototyping automated transcoding of incoming DICOM files
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3911
diff
changeset
|
1850 hasMoveOriginator, moveOriginatorAet, moveOriginatorId); |
3894
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1851 } |
8f7ad4989fec
transcoding to uncompressed transfer syntaxes over DICOM protocol is implemented
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1852 } |
3930
b99acc213937
transcoder plugins and GDCM transcoding are working
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3928
diff
changeset
|
1853 |
b99acc213937
transcoder plugins and GDCM transcoding are working
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3928
diff
changeset
|
1854 |
3944
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1855 bool ServerContext::Transcode(DicomImage& target, |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1856 DicomImage& source /* in, "GetParsed()" possibly modified */, |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1857 const std::set<DicomTransferSyntax>& allowedSyntaxes, |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1858 bool allowNewSopInstanceUid) |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1859 { |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1860 if (builtinDecoderTranscoderOrder_ == BuiltinDecoderTranscoderOrder_Before) |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1861 { |
3951
5fe8c6d3212e
removed useless information "hasSopInstanceUidChanged"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3947
diff
changeset
|
1862 if (dcmtkTranscoder_->Transcode(target, source, allowedSyntaxes, allowNewSopInstanceUid)) |
3944
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1863 { |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1864 return true; |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1865 } |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1866 } |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1867 |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1868 #if ORTHANC_ENABLE_PLUGINS == 1 |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1869 if (HasPlugins() && |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1870 GetPlugins().HasCustomTranscoder()) |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1871 { |
3951
5fe8c6d3212e
removed useless information "hasSopInstanceUidChanged"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3947
diff
changeset
|
1872 if (GetPlugins().Transcode(target, source, allowedSyntaxes, allowNewSopInstanceUid)) |
3944
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1873 { |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1874 return true; |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1875 } |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1876 else if (builtinDecoderTranscoderOrder_ == BuiltinDecoderTranscoderOrder_After) |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1877 { |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1878 LOG(INFO) << "The installed transcoding plugins cannot handle an image, " |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1879 << "fallback to the built-in DCMTK transcoder"; |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1880 } |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1881 } |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1882 #endif |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1883 |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1884 if (builtinDecoderTranscoderOrder_ == BuiltinDecoderTranscoderOrder_After) |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1885 { |
3951
5fe8c6d3212e
removed useless information "hasSopInstanceUidChanged"
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3947
diff
changeset
|
1886 return dcmtkTranscoder_->Transcode(target, source, allowedSyntaxes, allowNewSopInstanceUid); |
3944
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1887 } |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1888 else |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1889 { |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1890 return false; |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
3941
diff
changeset
|
1891 } |
aae045f802f4
preparing simplified interface for IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1892 } |
4375
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1893 |
4376
b002f9abe802
review of changeset 4375:208029732d51
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4375
diff
changeset
|
1894 const std::string& ServerContext::GetDeidentifiedContent(const DicomElement &element) const |
4375
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1895 { |
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1896 static const std::string redactedContent = "*** POTENTIAL PHI ***"; |
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1897 |
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1898 const DicomTag& tag = element.GetTag(); |
4789
51ec061516c9
Fix handling of option "DeidentifyLogs", notably for tags (0010,0010) and (0010,0020)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4752
diff
changeset
|
1899 if (deidentifyLogs_ && |
51ec061516c9
Fix handling of option "DeidentifyLogs", notably for tags (0010,0010) and (0010,0020)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4752
diff
changeset
|
1900 !element.GetValue().GetContent().empty() && |
51ec061516c9
Fix handling of option "DeidentifyLogs", notably for tags (0010,0010) and (0010,0020)
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4752
diff
changeset
|
1901 logsDeidentifierRules_.IsAlteredTag(tag)) |
4375
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1902 { |
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1903 return redactedContent; |
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1904 } |
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1905 else |
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1906 { |
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1907 return element.GetValue().GetContent(); |
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1908 } |
208029732d51
New config option "DeidentifyDimseQueryLogs"
Mark Poscablo <Mark.Poscablo@varian.com>
parents:
4274
diff
changeset
|
1909 } |
4473
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1910 |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1911 |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1912 void ServerContext::GetAcceptedTransferSyntaxes(std::set<DicomTransferSyntax>& syntaxes) |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1913 { |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1914 boost::mutex::scoped_lock lock(dynamicOptionsMutex_); |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1915 syntaxes = acceptedTransferSyntaxes_; |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1916 } |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1917 |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1918 |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1919 void ServerContext::SetAcceptedTransferSyntaxes(const std::set<DicomTransferSyntax>& syntaxes) |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1920 { |
68f52897c119
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1921 boost::mutex::scoped_lock lock(dynamicOptionsMutex_); |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
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parents:
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diff
changeset
|
1922 acceptedTransferSyntaxes_ = syntaxes; |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1923 } |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1924 |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1925 |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1926 bool ServerContext::IsUnknownSopClassAccepted() |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1927 { |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1928 boost::mutex::scoped_lock lock(dynamicOptionsMutex_); |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1929 return isUnknownSopClassAccepted_; |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1930 } |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1931 |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1932 |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1933 void ServerContext::SetUnknownSopClassAccepted(bool accepted) |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1934 { |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1935 boost::mutex::scoped_lock lock(dynamicOptionsMutex_); |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
4465
diff
changeset
|
1936 isUnknownSopClassAccepted_ = accepted; |
68f52897c119
new URIs: /tools/accepted-transfer-syntaxes and /tools/unknown-sop-class-accepted to replace Lua callbacks for transfer syntaxes
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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diff
changeset
|
1937 } |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
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|
1938 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1939 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1940 static void SerializeExpandedResource(Json::Value& target, |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
1941 const ExpandedResource& resource, |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
1942 DicomToJsonFormat format, |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
1943 const std::set<DicomTag>& requestedTags) |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1944 { |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1945 target = Json::objectValue; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1946 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1947 target["Type"] = GetResourceTypeText(resource.type_, false, true); |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1948 target["ID"] = resource.id_; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1949 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1950 switch (resource.type_) |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1951 { |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1952 case ResourceType_Patient: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1953 break; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1954 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1955 case ResourceType_Study: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1956 target["ParentPatient"] = resource.parentId_; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1957 break; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1958 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1959 case ResourceType_Series: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1960 target["ParentStudy"] = resource.parentId_; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1961 break; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1962 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1963 case ResourceType_Instance: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1964 target["ParentSeries"] = resource.parentId_; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1965 break; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1966 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1967 default: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1968 throw OrthancException(ErrorCode_InternalError); |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1969 } |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1970 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1971 switch (resource.type_) |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1972 { |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1973 case ResourceType_Patient: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1974 case ResourceType_Study: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1975 case ResourceType_Series: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1976 { |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1977 Json::Value c = Json::arrayValue; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1978 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1979 for (std::list<std::string>::const_iterator |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1980 it = resource.childrenIds_.begin(); it != resource.childrenIds_.end(); ++it) |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1981 { |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1982 c.append(*it); |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1983 } |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1984 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1985 if (resource.type_ == ResourceType_Patient) |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1986 { |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1987 target["Studies"] = c; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1988 } |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1989 else if (resource.type_ == ResourceType_Study) |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1990 { |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1991 target["Series"] = c; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1992 } |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1993 else |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1994 { |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
1995 target["Instances"] = c; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1996 } |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1997 break; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
1998 } |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
1999 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2000 case ResourceType_Instance: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2001 break; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2002 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2003 default: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2004 throw OrthancException(ErrorCode_InternalError); |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2005 } |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2006 |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2007 switch (resource.type_) |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2008 { |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2009 case ResourceType_Patient: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2010 case ResourceType_Study: |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2011 break; |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2012 |
acd3f72e2a21
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2013 case ResourceType_Series: |
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|
2014 if (resource.expectedNumberOfInstances_ < 0) |
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parents:
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|
2015 { |
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|
2016 target["ExpectedNumberOfInstances"] = Json::nullValue; |
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|
2017 } |
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|
2018 else |
acd3f72e2a21
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|
2019 { |
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|
2020 target["ExpectedNumberOfInstances"] = resource.expectedNumberOfInstances_; |
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|
2021 } |
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|
2022 target["Status"] = resource.status_; |
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|
2023 break; |
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|
2024 |
acd3f72e2a21
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|
2025 case ResourceType_Instance: |
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|
2026 { |
acd3f72e2a21
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|
2027 target["FileSize"] = static_cast<unsigned int>(resource.fileSize_); |
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|
2028 target["FileUuid"] = resource.fileUuid_; |
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|
2029 |
acd3f72e2a21
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|
2030 if (resource.indexInSeries_ < 0) |
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|
2031 { |
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|
2032 target["IndexInSeries"] = Json::nullValue; |
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|
2033 } |
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|
2034 else |
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|
2035 { |
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|
2036 target["IndexInSeries"] = resource.indexInSeries_; |
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|
2037 } |
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|
2038 |
acd3f72e2a21
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|
2039 break; |
acd3f72e2a21
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|
2040 } |
acd3f72e2a21
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|
2041 |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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changeset
|
2042 default: |
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|
2043 throw OrthancException(ErrorCode_InternalError); |
acd3f72e2a21
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|
2044 } |
acd3f72e2a21
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|
2045 |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
parents:
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changeset
|
2046 if (!resource.anonymizedFrom_.empty()) |
acd3f72e2a21
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parents:
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changeset
|
2047 { |
acd3f72e2a21
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parents:
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|
2048 target["AnonymizedFrom"] = resource.anonymizedFrom_; |
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Alain Mazy <am@osimis.io>
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|
2049 } |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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|
2050 |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
parents:
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|
2051 if (!resource.modifiedFrom_.empty()) |
acd3f72e2a21
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|
2052 { |
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|
2053 target["ModifiedFrom"] = resource.modifiedFrom_; |
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|
2054 } |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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|
2055 |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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|
2056 if (resource.type_ == ResourceType_Patient || |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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|
2057 resource.type_ == ResourceType_Study || |
acd3f72e2a21
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|
2058 resource.type_ == ResourceType_Series) |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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|
2059 { |
acd3f72e2a21
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|
2060 target["IsStable"] = resource.isStable_; |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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changeset
|
2061 |
acd3f72e2a21
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changeset
|
2062 if (!resource.lastUpdate_.empty()) |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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changeset
|
2063 { |
acd3f72e2a21
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|
2064 target["LastUpdate"] = resource.lastUpdate_; |
acd3f72e2a21
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parents:
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|
2065 } |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2066 } |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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changeset
|
2067 |
acd3f72e2a21
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|
2068 // serialize tags |
acd3f72e2a21
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|
2069 |
acd3f72e2a21
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|
2070 static const char* const MAIN_DICOM_TAGS = "MainDicomTags"; |
acd3f72e2a21
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|
2071 static const char* const PATIENT_MAIN_DICOM_TAGS = "PatientMainDicomTags"; |
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Alain Mazy <am@osimis.io>
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|
2072 |
acd3f72e2a21
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|
2073 DicomMap mainDicomTags; |
acd3f72e2a21
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|
2074 resource.tags_.ExtractResourceInformation(mainDicomTags, resource.type_); |
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changeset
|
2075 |
acd3f72e2a21
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diff
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|
2076 target[MAIN_DICOM_TAGS] = Json::objectValue; |
acd3f72e2a21
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|
2077 FromDcmtkBridge::ToJson(target[MAIN_DICOM_TAGS], mainDicomTags, format); |
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changeset
|
2078 |
acd3f72e2a21
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|
2079 if (resource.type_ == ResourceType_Study) |
acd3f72e2a21
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parents:
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diff
changeset
|
2080 { |
acd3f72e2a21
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|
2081 DicomMap patientMainDicomTags; |
acd3f72e2a21
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|
2082 resource.tags_.ExtractPatientInformation(patientMainDicomTags); |
acd3f72e2a21
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changeset
|
2083 |
acd3f72e2a21
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|
2084 target[PATIENT_MAIN_DICOM_TAGS] = Json::objectValue; |
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|
2085 FromDcmtkBridge::ToJson(target[PATIENT_MAIN_DICOM_TAGS], patientMainDicomTags, format); |
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|
2086 } |
acd3f72e2a21
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changeset
|
2087 |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
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changeset
|
2088 if (requestedTags.size() > 0) |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2089 { |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
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diff
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|
2090 static const char* const REQUESTED_TAGS = "RequestedTags"; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2091 |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
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diff
changeset
|
2092 DicomMap tags; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
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diff
changeset
|
2093 resource.tags_.ExtractTags(tags, requestedTags); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2094 |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
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diff
changeset
|
2095 target[REQUESTED_TAGS] = Json::objectValue; |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2096 FromDcmtkBridge::ToJson(target[REQUESTED_TAGS], tags, format); |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
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diff
changeset
|
2097 } |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
parents:
4935
diff
changeset
|
2098 |
4935
acd3f72e2a21
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|
2099 } |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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|
2100 |
acd3f72e2a21
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diff
changeset
|
2101 |
4944
f377d5643538
new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
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diff
changeset
|
2102 static void ComputeInstanceTags(ExpandedResource& resource, |
f377d5643538
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Alain Mazy <am@osimis.io>
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|
2103 ServerContext& context, |
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|
2104 const std::string& instancePublicId, |
f377d5643538
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2105 const std::set<DicomTag>& requestedTags) |
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2106 { |
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2107 if (requestedTags.count(DICOM_TAG_INSTANCE_AVAILABILITY) > 0) |
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2108 { |
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2109 resource.tags_.SetValue(DICOM_TAG_INSTANCE_AVAILABILITY, "ONLINE", false); |
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2110 resource.missingRequestedTags_.erase(DICOM_TAG_INSTANCE_AVAILABILITY); |
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2111 } |
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2112 } |
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2113 |
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2114 |
4940
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2115 static void ComputeSeriesTags(ExpandedResource& resource, |
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2116 ServerContext& context, |
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2117 const std::string& seriesPublicId, |
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2118 const std::set<DicomTag>& requestedTags) |
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2119 { |
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2120 if (requestedTags.count(DICOM_TAG_NUMBER_OF_SERIES_RELATED_INSTANCES) > 0) |
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2121 { |
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2122 ServerIndex& index = context.GetIndex(); |
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2123 std::list<std::string> instances; |
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2124 |
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2125 index.GetChildren(instances, seriesPublicId); |
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2126 |
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2127 resource.tags_.SetValue(DICOM_TAG_NUMBER_OF_SERIES_RELATED_INSTANCES, |
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2128 boost::lexical_cast<std::string>(instances.size()), false); |
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2129 resource.missingRequestedTags_.erase(DICOM_TAG_NUMBER_OF_SERIES_RELATED_INSTANCES); |
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2130 } |
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2131 } |
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2132 |
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2133 static void ComputeStudyTags(ExpandedResource& resource, |
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2134 ServerContext& context, |
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2135 const std::string& studyPublicId, |
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2136 const std::set<DicomTag>& requestedTags) |
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2137 { |
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2138 ServerIndex& index = context.GetIndex(); |
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2139 std::list<std::string> series; |
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2140 std::list<std::string> instances; |
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2141 |
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2142 bool hasNbRelatedSeries = requestedTags.count(DICOM_TAG_NUMBER_OF_STUDY_RELATED_SERIES) > 0; |
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2143 bool hasNbRelatedInstances = requestedTags.count(DICOM_TAG_NUMBER_OF_STUDY_RELATED_INSTANCES) > 0; |
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2144 bool hasModalitiesInStudy = requestedTags.count(DICOM_TAG_MODALITIES_IN_STUDY) > 0; |
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2145 bool hasSopClassesInStudy = requestedTags.count(DICOM_TAG_SOP_CLASSES_IN_STUDY) > 0; |
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2146 |
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2147 index.GetChildren(series, studyPublicId); |
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2148 |
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2149 if (hasModalitiesInStudy) |
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2150 { |
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2151 std::set<std::string> values; |
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2152 |
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2153 for (std::list<std::string>::const_iterator |
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2154 it = series.begin(); it != series.end(); ++it) |
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2155 { |
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2156 DicomMap tags; |
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2157 index.GetMainDicomTags(tags, *it, ResourceType_Series, ResourceType_Series); |
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2158 |
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2159 const DicomValue* value = tags.TestAndGetValue(DICOM_TAG_MODALITY); |
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2160 |
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|
2161 if (value != NULL && |
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2162 !value->IsNull() && |
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2163 !value->IsBinary()) |
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2164 { |
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2165 values.insert(value->GetContent()); |
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2166 } |
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2167 } |
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2168 |
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2169 std::string modalities; |
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2170 Toolbox::JoinStrings(modalities, values, "\\"); |
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2171 |
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2172 resource.tags_.SetValue(DICOM_TAG_MODALITIES_IN_STUDY, modalities, false); |
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2173 resource.missingRequestedTags_.erase(DICOM_TAG_MODALITIES_IN_STUDY); |
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2174 } |
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2175 |
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2176 if (hasNbRelatedSeries) |
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2177 { |
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2178 resource.tags_.SetValue(DICOM_TAG_NUMBER_OF_STUDY_RELATED_SERIES, |
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2179 boost::lexical_cast<std::string>(series.size()), false); |
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2180 resource.missingRequestedTags_.erase(DICOM_TAG_NUMBER_OF_STUDY_RELATED_SERIES); |
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2181 } |
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2182 |
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2183 if (hasNbRelatedInstances || hasSopClassesInStudy) |
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2184 { |
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2185 for (std::list<std::string>::const_iterator |
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2186 it = series.begin(); it != series.end(); ++it) |
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2187 { |
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2188 std::list<std::string> seriesInstancesIds; |
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2189 index.GetChildren(seriesInstancesIds, *it); |
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2190 |
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2191 instances.splice(instances.end(), seriesInstancesIds); |
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2192 } |
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2193 |
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2194 if (hasNbRelatedInstances) |
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2195 { |
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2196 resource.tags_.SetValue(DICOM_TAG_NUMBER_OF_STUDY_RELATED_INSTANCES, |
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2197 boost::lexical_cast<std::string>(instances.size()), false); |
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2198 resource.missingRequestedTags_.erase(DICOM_TAG_NUMBER_OF_STUDY_RELATED_INSTANCES); |
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2199 } |
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2200 |
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2201 if (hasSopClassesInStudy) |
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2202 { |
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2203 std::set<std::string> values; |
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2204 |
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2205 for (std::list<std::string>::const_iterator |
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2206 it = instances.begin(); it != instances.end(); ++it) |
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2207 { |
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2208 std::string value; |
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2209 |
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2210 if (context.LookupOrReconstructMetadata(value, *it, ResourceType_Instance, MetadataType_Instance_SopClassUid)) |
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2211 { |
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2212 values.insert(value); |
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2213 } |
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2214 } |
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2215 |
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2216 if (values.size() > 0) |
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2217 { |
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2218 std::string sopClassUids; |
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2219 Toolbox::JoinStrings(sopClassUids, values, "\\"); |
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2220 resource.tags_.SetValue(DICOM_TAG_SOP_CLASSES_IN_STUDY, sopClassUids, false); |
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2221 } |
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2222 |
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2223 resource.missingRequestedTags_.erase(DICOM_TAG_SOP_CLASSES_IN_STUDY); |
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2224 } |
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2225 } |
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2226 } |
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2227 |
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2228 static void ComputePatientTags(ExpandedResource& resource, |
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2229 ServerContext& context, |
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2230 const std::string& patientPublicId, |
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2231 const std::set<DicomTag>& requestedTags) |
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2232 { |
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2233 ServerIndex& index = context.GetIndex(); |
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2234 |
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2235 std::list<std::string> studies; |
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2236 std::list<std::string> series; |
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2237 std::list<std::string> instances; |
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2238 |
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2239 bool hasNbRelatedStudies = requestedTags.count(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_STUDIES) > 0; |
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2240 bool hasNbRelatedSeries = requestedTags.count(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_SERIES) > 0; |
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2241 bool hasNbRelatedInstances = requestedTags.count(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_INSTANCES) > 0; |
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2242 |
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2243 index.GetChildren(studies, patientPublicId); |
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2244 |
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2245 if (hasNbRelatedStudies) |
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2246 { |
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2247 resource.tags_.SetValue(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_STUDIES, |
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2248 boost::lexical_cast<std::string>(studies.size()), false); |
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2249 resource.missingRequestedTags_.erase(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_STUDIES); |
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2250 } |
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2251 |
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2252 if (hasNbRelatedSeries || hasNbRelatedInstances) |
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2253 { |
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2254 for (std::list<std::string>::const_iterator |
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2255 it = studies.begin(); it != studies.end(); ++it) |
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2256 { |
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2257 std::list<std::string> thisSeriesIds; |
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2258 index.GetChildren(thisSeriesIds, *it); |
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2259 series.splice(series.end(), thisSeriesIds); |
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2260 } |
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2261 |
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2262 if (hasNbRelatedSeries) |
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2263 { |
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2264 resource.tags_.SetValue(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_SERIES, |
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2265 boost::lexical_cast<std::string>(series.size()), false); |
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2266 resource.missingRequestedTags_.erase(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_SERIES); |
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2267 } |
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2268 } |
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2269 |
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2270 if (hasNbRelatedInstances) |
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2271 { |
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2272 for (std::list<std::string>::const_iterator |
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2273 it = series.begin(); it != series.end(); ++it) |
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2274 { |
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2275 std::list<std::string> thisInstancesIds; |
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2276 index.GetChildren(thisInstancesIds, *it); |
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2277 instances.splice(instances.end(), thisInstancesIds); |
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2278 } |
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2279 |
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2280 resource.tags_.SetValue(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_INSTANCES, |
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2281 boost::lexical_cast<std::string>(instances.size()), false); |
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2282 resource.missingRequestedTags_.erase(DICOM_TAG_NUMBER_OF_PATIENT_RELATED_INSTANCES); |
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2283 } |
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2284 } |
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2285 |
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2286 |
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2287 static void ComputeTags(ExpandedResource& resource, |
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2288 ServerContext& context, |
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2289 const std::string& resourceId, |
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2290 ResourceType level, |
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2291 const std::set<DicomTag>& requestedTags) |
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2292 { |
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2293 if (level == ResourceType_Patient |
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2294 && DicomMap::HasComputedTags(resource.missingRequestedTags_, ResourceType_Patient)) |
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2295 { |
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2296 ComputePatientTags(resource, context, resourceId, requestedTags); |
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2297 } |
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2298 |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2299 if (level == ResourceType_Study |
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Alain Mazy <am@osimis.io>
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diff
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|
2300 && DicomMap::HasComputedTags(resource.missingRequestedTags_, ResourceType_Study)) |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2301 { |
304514ce84ee
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Alain Mazy <am@osimis.io>
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4939
diff
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|
2302 ComputeStudyTags(resource, context, resourceId, requestedTags); |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2303 } |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2304 |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2305 if (level == ResourceType_Series |
304514ce84ee
tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
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diff
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|
2306 && DicomMap::HasComputedTags(resource.missingRequestedTags_, ResourceType_Series)) |
304514ce84ee
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Alain Mazy <am@osimis.io>
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4939
diff
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|
2307 { |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2308 ComputeSeriesTags(resource, context, resourceId, requestedTags); |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2309 } |
4944
f377d5643538
new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
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diff
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|
2310 |
f377d5643538
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Alain Mazy <am@osimis.io>
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|
2311 if (level == ResourceType_Instance |
f377d5643538
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Alain Mazy <am@osimis.io>
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|
2312 && DicomMap::HasComputedTags(resource.missingRequestedTags_, ResourceType_Instance)) |
f377d5643538
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Alain Mazy <am@osimis.io>
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diff
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|
2313 { |
f377d5643538
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Alain Mazy <am@osimis.io>
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diff
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|
2314 ComputeInstanceTags(resource, context, resourceId, requestedTags); |
f377d5643538
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Alain Mazy <am@osimis.io>
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|
2315 } |
4940
304514ce84ee
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Alain Mazy <am@osimis.io>
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|
2316 } |
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Alain Mazy <am@osimis.io>
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|
2317 |
4935
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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4921
diff
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|
2318 bool ServerContext::ExpandResource(Json::Value& target, |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
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|
2319 const std::string& publicId, |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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|
2320 ResourceType level, |
4936
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
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4935
diff
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|
2321 DicomToJsonFormat format, |
8422e4f99a18
Handling RequestedTags in ExpandResource -> read parent main dicom tags if required. Not yet getting missing tags from file. Integration tests ok
Alain Mazy <am@osimis.io>
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4935
diff
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|
2322 const std::set<DicomTag>& requestedTags) |
4935
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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|
2323 { |
4937
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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|
2324 std::string unusedInstanceId; |
4940
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Alain Mazy <am@osimis.io>
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|
2325 Json::Value* unusedDicomAsJson = NULL; |
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Alain Mazy <am@osimis.io>
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|
2326 DicomMap unusedMainDicomTags; |
4937
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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|
2327 |
4940
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2328 return ExpandResource(target, publicId, unusedMainDicomTags, unusedInstanceId, unusedDicomAsJson, level, format, requestedTags); |
4937
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
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|
2329 } |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
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|
2330 |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
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|
2331 bool ServerContext::ExpandResource(Json::Value& target, |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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|
2332 const std::string& publicId, |
4940
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Alain Mazy <am@osimis.io>
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diff
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|
2333 const DicomMap& mainDicomTags, // optional: the main dicom tags for the resource (if already available) |
4939 | 2334 const std::string& instanceId, // optional: the id of an instance for the resource (if already available) |
4940
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Alain Mazy <am@osimis.io>
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|
2335 const Json::Value* dicomAsJson, // optional: the dicom-as-json for the resource (if already available) |
4937
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
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|
2336 ResourceType level, |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
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|
2337 DicomToJsonFormat format, |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
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|
2338 const std::set<DicomTag>& requestedTags) |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
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|
2339 { |
4935
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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diff
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|
2340 ExpandedResource resource; |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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|
2341 |
4940
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Alain Mazy <am@osimis.io>
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|
2342 if (ExpandResource(resource, publicId, mainDicomTags, instanceId, dicomAsJson, level, requestedTags, ExpandResourceDbFlags_Default)) |
4939 | 2343 { |
2344 SerializeExpandedResource(target, resource, format, requestedTags); | |
2345 return true; | |
2346 } | |
2347 | |
2348 return false; | |
2349 } | |
2350 | |
2351 bool ServerContext::ExpandResource(ExpandedResource& resource, | |
2352 const std::string& publicId, | |
4940
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2353 const DicomMap& mainDicomTags, // optional: the main dicom tags for the resource (if already available) |
4939 | 2354 const std::string& instanceId, // optional: the id of an instance for the resource (if already available) |
4940
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Alain Mazy <am@osimis.io>
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|
2355 const Json::Value* dicomAsJson, // optional: the dicom-as-json for the resource (if already available) |
4939 | 2356 ResourceType level, |
4940
304514ce84ee
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Alain Mazy <am@osimis.io>
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|
2357 const std::set<DicomTag>& requestedTags, |
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Alain Mazy <am@osimis.io>
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4939
diff
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|
2358 ExpandResourceDbFlags expandFlags) |
4939 | 2359 { |
4940
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2360 // first try to get the tags from what is already available |
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Alain Mazy <am@osimis.io>
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|
2361 |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2362 if ((expandFlags & ExpandResourceDbFlags_IncludeMainDicomTags) |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2363 && (mainDicomTags.GetSize() > 0) |
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Alain Mazy <am@osimis.io>
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diff
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|
2364 && (dicomAsJson != NULL)) |
304514ce84ee
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Alain Mazy <am@osimis.io>
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|
2365 { |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2366 |
4984 | 2367 resource.tags_.Merge(mainDicomTags); |
4940
304514ce84ee
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Alain Mazy <am@osimis.io>
parents:
4939
diff
changeset
|
2368 |
4984 | 2369 if (dicomAsJson->isObject()) |
4940
304514ce84ee
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Alain Mazy <am@osimis.io>
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|
2370 { |
304514ce84ee
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diff
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|
2371 resource.tags_.FromDicomAsJson(*dicomAsJson); |
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Alain Mazy <am@osimis.io>
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|
2372 } |
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Alain Mazy <am@osimis.io>
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diff
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|
2373 |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
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|
2374 std::set<DicomTag> retrievedTags; |
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Alain Mazy <am@osimis.io>
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diff
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|
2375 std::set<DicomTag> missingTags; |
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Alain Mazy <am@osimis.io>
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diff
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|
2376 resource.tags_.GetTags(retrievedTags); |
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Alain Mazy <am@osimis.io>
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4939
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|
2377 |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
changeset
|
2378 Toolbox::GetMissingsFromSet(missingTags, requestedTags, retrievedTags); |
304514ce84ee
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Alain Mazy <am@osimis.io>
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|
2379 |
304514ce84ee
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Alain Mazy <am@osimis.io>
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diff
changeset
|
2380 // if all possible tags have been read, no need to get them from DB anymore |
304514ce84ee
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|
2381 if (missingTags.size() == 0 || DicomMap::HasOnlyComputedTags(missingTags)) |
304514ce84ee
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diff
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|
2382 { |
304514ce84ee
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diff
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|
2383 expandFlags = static_cast<ExpandResourceDbFlags>(expandFlags & ~ExpandResourceDbFlags_IncludeMainDicomTags); |
304514ce84ee
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|
2384 } |
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|
2385 |
304514ce84ee
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diff
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|
2386 if (missingTags.size() == 0 && expandFlags == ExpandResourceDbFlags_None) // we have already retrieved anything we need |
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|
2387 { |
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|
2388 return true; |
304514ce84ee
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|
2389 } |
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|
2390 } |
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|
2391 |
304514ce84ee
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diff
changeset
|
2392 if (expandFlags != ExpandResourceDbFlags_None |
4978
2cfa50d8eb60
Speed-up handling of DicomModalitiesInStudy in C-Find and tools/find queries
Alain Mazy <am@osimis.io>
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4977
diff
changeset
|
2393 && GetIndex().ExpandResource(resource, publicId, level, requestedTags, static_cast<ExpandResourceDbFlags>(expandFlags | ExpandResourceDbFlags_IncludeMetadata))) // we always need the metadata to get the mainDicomTagsSignature |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
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4921
diff
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|
2394 { |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
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diff
changeset
|
2395 // check the main dicom tags list has not changed since the resource was stored |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
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diff
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|
2396 if (resource.mainDicomTagsSignature_ != DicomMap::GetMainDicomTagsSignature(resource.type_)) |
acd3f72e2a21
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Alain Mazy <am@osimis.io>
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|
2397 { |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
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changeset
|
2398 OrthancConfiguration::ReaderLock lock; |
4944
f377d5643538
new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
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4941
diff
changeset
|
2399 if (lock.GetConfiguration().IsWarningEnabled(Warnings_002_InconsistentDicomTagsInDb)) |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
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diff
changeset
|
2400 { |
4944
f377d5643538
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diff
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|
2401 LOG(WARNING) << "W002: " << Orthanc::GetResourceTypeText(resource.type_, false , false) << " has been stored with another version of Main Dicom Tags list, you should POST to /" << Orthanc::GetResourceTypeText(resource.type_, true, false) << "/" << resource.id_ << "/reconstruct to update the list of tags saved in DB. Some MainDicomTags might be missing from this answer."; |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
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changeset
|
2402 } |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
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4921
diff
changeset
|
2403 } |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2404 |
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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4936
diff
changeset
|
2405 // possibly merge missing requested tags from dicom-as-json |
4940
304514ce84ee
tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
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changeset
|
2406 if (!resource.missingRequestedTags_.empty() && !DicomMap::HasOnlyComputedTags(resource.missingRequestedTags_)) |
4937
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
changeset
|
2407 { |
4941 | 2408 OrthancConfiguration::ReaderLock lock; |
4944
f377d5643538
new Warnings configuration + InstanceAvailability tag
Alain Mazy <am@osimis.io>
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4941
diff
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2409 if (lock.GetConfiguration().IsWarningEnabled(Warnings_001_TagsBeingReadFromStorage)) |
4941 | 2410 { |
2411 std::set<DicomTag> missingTags; | |
2412 Toolbox::AppendSets(missingTags, resource.missingRequestedTags_); | |
4981 | 2413 for (std::set<DicomTag>::const_iterator it = resource.missingRequestedTags_.begin(); it != resource.missingRequestedTags_.end(); ++it) |
4941 | 2414 { |
2415 if (DicomMap::IsComputedTag(*it)) | |
2416 { | |
2417 missingTags.erase(*it); | |
2418 } | |
2419 } | |
2420 | |
2421 std::string missings; | |
2422 FromDcmtkBridge::FormatListOfTags(missings, missingTags); | |
2423 | |
4944
f377d5643538
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Alain Mazy <am@osimis.io>
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2424 LOG(WARNING) << "W001: Accessing Dicom tags from storage when accessing " << Orthanc::GetResourceTypeText(resource.type_, false , false) << " : " << missings; |
4941 | 2425 } |
2426 | |
2427 | |
4937
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
2428 std::string instanceId_ = instanceId; |
4940
304514ce84ee
tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents:
4939
diff
changeset
|
2429 DicomMap tagsFromJson; |
304514ce84ee
tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents:
4939
diff
changeset
|
2430 |
304514ce84ee
tools/find + C-Find + list-resources now all using the same code (ExpandResource) to build 'computed tags'
Alain Mazy <am@osimis.io>
parents:
4939
diff
changeset
|
2431 if (dicomAsJson == NULL) |
4937
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
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|
2432 { |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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4936
diff
changeset
|
2433 if (instanceId_.empty()) |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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4936
diff
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|
2434 { |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
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|
2435 if (level == ResourceType_Instance) |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
2436 { |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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4936
diff
changeset
|
2437 instanceId_ = publicId; |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
parents:
4936
diff
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|
2438 } |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
2439 else |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
parents:
4936
diff
changeset
|
2440 { |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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4936
diff
changeset
|
2441 std::list<std::string> instancesIds; |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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4936
diff
changeset
|
2442 GetIndex().GetChildInstances(instancesIds, publicId); |
3f9b9865c8cc
include requested tags from storage if needed
Alain Mazy <am@osimis.io>
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diff
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|
2443 if (instancesIds.size() < 1) |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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4936
diff
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|
2444 { |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
changeset
|
2445 throw OrthancException(ErrorCode_InternalError, "ExpandResource: no instances found"); |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
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|
2446 } |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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4936
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|
2447 instanceId_ = instancesIds.front(); |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
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|
2448 } |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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4936
diff
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|
2449 } |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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|
2450 |
4940
304514ce84ee
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Alain Mazy <am@osimis.io>
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4939
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|
2451 Json::Value tmpDicomAsJson; |
304514ce84ee
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Alain Mazy <am@osimis.io>
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4939
diff
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|
2452 ReadDicomAsJson(tmpDicomAsJson, instanceId_); |
304514ce84ee
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Alain Mazy <am@osimis.io>
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|
2453 tagsFromJson.FromDicomAsJson(tmpDicomAsJson); |
304514ce84ee
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Alain Mazy <am@osimis.io>
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2454 } |
304514ce84ee
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Alain Mazy <am@osimis.io>
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|
2455 else |
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Alain Mazy <am@osimis.io>
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4939
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|
2456 { |
304514ce84ee
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Alain Mazy <am@osimis.io>
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4939
diff
changeset
|
2457 tagsFromJson.FromDicomAsJson(*dicomAsJson); |
4937
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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4936
diff
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|
2458 } |
3f9b9865c8cc
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Alain Mazy <am@osimis.io>
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diff
changeset
|
2459 |
4940
304514ce84ee
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Alain Mazy <am@osimis.io>
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4939
diff
changeset
|
2460 resource.tags_.Merge(tagsFromJson); |
4937
3f9b9865c8cc
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4936
diff
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|
2461 } |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2462 |
4940
304514ce84ee
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Alain Mazy <am@osimis.io>
parents:
4939
diff
changeset
|
2463 // compute the requested tags |
304514ce84ee
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Alain Mazy <am@osimis.io>
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4939
diff
changeset
|
2464 ComputeTags(resource, *this, publicId, level, requestedTags); |
304514ce84ee
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Alain Mazy <am@osimis.io>
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|
2465 } |
304514ce84ee
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Alain Mazy <am@osimis.io>
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4939
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changeset
|
2466 else |
304514ce84ee
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Alain Mazy <am@osimis.io>
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4939
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|
2467 { |
304514ce84ee
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Alain Mazy <am@osimis.io>
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4939
diff
changeset
|
2468 return false; |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2469 } |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2470 |
4940
304514ce84ee
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Alain Mazy <am@osimis.io>
parents:
4939
diff
changeset
|
2471 return true; |
4935
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2472 } |
acd3f72e2a21
split ExpandResource in 2: read from DB and serialize to json. This will allow us to merge requested tags from both the DB and the file system
Alain Mazy <am@osimis.io>
parents:
4921
diff
changeset
|
2473 |
224 | 2474 } |