Mercurial > hg > orthanc
annotate OrthancServer/ServerContext.h @ 3928:4cdc875510d1 transcoding
ServerContext::DecodeDicomFrame()
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Thu, 14 May 2020 13:31:05 +0200 |
parents | 0e3849268a55 |
children | b99acc213937 |
rev | line source |
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224 | 1 /** |
2 * Orthanc - A Lightweight, RESTful DICOM Store | |
1900 | 3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics |
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4 * Department, University Hospital of Liege, Belgium |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
224 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
8 * modify it under the terms of the GNU General Public License as | |
9 * published by the Free Software Foundation, either version 3 of the | |
10 * License, or (at your option) any later version. | |
11 * | |
12 * In addition, as a special exception, the copyright holders of this | |
13 * program give permission to link the code of its release with the | |
14 * OpenSSL project's "OpenSSL" library (or with modified versions of it | |
15 * that use the same license as the "OpenSSL" library), and distribute | |
16 * the linked executables. You must obey the GNU General Public License | |
17 * in all respects for all of the code used other than "OpenSSL". If you | |
18 * modify file(s) with this exception, you may extend this exception to | |
19 * your version of the file(s), but you are not obligated to do so. If | |
20 * you do not wish to do so, delete this exception statement from your | |
21 * version. If you delete this exception statement from all source files | |
22 * in the program, then also delete it here. | |
23 * | |
24 * This program is distributed in the hope that it will be useful, but | |
25 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU | |
27 * General Public License for more details. | |
28 * | |
29 * You should have received a copy of the GNU General Public License | |
30 * along with this program. If not, see <http://www.gnu.org/licenses/>. | |
31 **/ | |
32 | |
33 | |
34 #pragma once | |
35 | |
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36 #include "IServerListener.h" |
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37 #include "LuaScripting.h" |
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38 #include "OrthancHttpHandler.h" |
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39 #include "ServerIndex.h" |
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40 #include "ServerJobs/IStorageCommitmentFactory.h" |
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41 |
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42 #include "../Core/Cache/MemoryCache.h" |
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43 #include "../Core/DicomParsing/IDicomTranscoder.h" |
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44 |
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45 |
224 | 46 namespace Orthanc |
47 { | |
3097 | 48 class DicomInstanceToStore; |
49 class IStorageArea; | |
50 class JobsEngine; | |
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51 class MetricsRegistry; |
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53 class ParsedDicomFile; |
3097 | 54 class RestApiOutput; |
55 class SetOfInstancesJob; | |
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56 class SharedArchive; |
3097 | 57 class SharedMessageQueue; |
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58 class StorageCommitmentReports; |
3097 | 59 |
3085 | 60 |
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61 /** |
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62 * This class is responsible for maintaining the storage area on the |
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63 * filesystem (including compression), as well as the index of the |
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64 * DICOM store. It implements the required locking mechanisms. |
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65 **/ |
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66 class ServerContext : |
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67 public IStorageCommitmentFactory, |
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68 private JobsRegistry::IObserver |
224 | 69 { |
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70 public: |
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71 class ILookupVisitor : public boost::noncopyable |
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72 { |
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73 public: |
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74 virtual ~ILookupVisitor() |
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75 { |
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76 } |
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77 |
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78 virtual bool IsDicomAsJsonNeeded() const = 0; |
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79 |
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80 virtual void MarkAsComplete() = 0; |
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81 |
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82 virtual void Visit(const std::string& publicId, |
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83 const std::string& instanceId, |
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84 const DicomMap& mainDicomTags, |
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85 const Json::Value* dicomAsJson) = 0; |
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86 }; |
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87 |
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88 |
224 | 89 private: |
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90 class LuaServerListener : public IServerListener |
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91 { |
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92 private: |
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93 ServerContext& context_; |
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94 |
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95 public: |
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96 LuaServerListener(ServerContext& context) : |
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97 context_(context) |
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98 { |
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99 } |
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100 |
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101 virtual void SignalStoredInstance(const std::string& publicId, |
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102 const DicomInstanceToStore& instance, |
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103 const Json::Value& simplifiedTags) |
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104 { |
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105 context_.mainLua_.SignalStoredInstance(publicId, instance, simplifiedTags); |
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106 } |
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107 |
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108 virtual void SignalChange(const ServerIndexChange& change) |
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109 { |
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110 context_.mainLua_.SignalChange(change); |
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111 } |
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112 |
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113 virtual bool FilterIncomingInstance(const DicomInstanceToStore& instance, |
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114 const Json::Value& simplified) |
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115 { |
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116 return context_.filterLua_.FilterIncomingInstance(instance, simplified); |
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117 } |
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118 }; |
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119 |
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120 class DicomCacheProvider : public Deprecated::ICachePageProvider // TODO |
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121 { |
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122 private: |
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123 ServerContext& context_; |
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124 |
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125 public: |
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126 DicomCacheProvider(ServerContext& context) : context_(context) |
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127 { |
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128 } |
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129 |
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130 virtual IDynamicObject* Provide(const std::string& id); |
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131 }; |
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132 |
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133 class ServerListener |
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134 { |
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135 private: |
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136 IServerListener *listener_; |
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137 std::string description_; |
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138 |
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139 public: |
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140 ServerListener(IServerListener& listener, |
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141 const std::string& description) : |
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142 listener_(&listener), |
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143 description_(description) |
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144 { |
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145 } |
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146 |
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147 IServerListener& GetListener() |
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148 { |
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149 return *listener_; |
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150 } |
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151 |
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152 const std::string& GetDescription() |
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153 { |
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154 return description_; |
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155 } |
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156 }; |
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157 |
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158 typedef std::list<ServerListener> ServerListeners; |
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159 |
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160 |
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161 static void ChangeThread(ServerContext* that, |
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162 unsigned int sleepDelay); |
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163 |
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164 static void SaveJobsThread(ServerContext* that, |
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165 unsigned int sleepDelay); |
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166 |
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167 void ReadDicomAsJsonInternal(std::string& result, |
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168 const std::string& instancePublicId); |
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169 |
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170 void SaveJobsEngine(); |
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171 |
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172 virtual void SignalJobSubmitted(const std::string& jobId) ORTHANC_OVERRIDE; |
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173 |
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174 virtual void SignalJobSuccess(const std::string& jobId) ORTHANC_OVERRIDE; |
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175 |
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176 virtual void SignalJobFailure(const std::string& jobId) ORTHANC_OVERRIDE; |
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177 |
224 | 178 ServerIndex index_; |
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179 IStorageArea& area_; |
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180 |
236 | 181 bool compressionEnabled_; |
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182 bool storeMD5_; |
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183 |
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184 DicomCacheProvider provider_; |
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185 boost::mutex dicomCacheMutex_; |
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186 Deprecated::MemoryCache dicomCache_; // TODO |
224 | 187 |
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188 LuaScripting mainLua_; |
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189 LuaScripting filterLua_; |
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190 LuaServerListener luaListener_; |
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191 std::unique_ptr<SharedArchive> mediaArchive_; |
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192 |
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193 // The "JobsEngine" must be *after* "LuaScripting", as |
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194 // "LuaScripting" embeds "LuaJobManager" that registers as an |
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195 // observer to "SequenceOfOperationsJob", whose lifetime |
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196 // corresponds to that of "JobsEngine". It must also be after |
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197 // "mediaArchive_", as jobs might access this archive. |
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198 JobsEngine jobsEngine_; |
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199 |
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200 #if ORTHANC_ENABLE_PLUGINS == 1 |
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201 OrthancPlugins* plugins_; |
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202 #endif |
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203 |
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204 ServerListeners listeners_; |
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205 boost::recursive_mutex listenersMutex_; |
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206 |
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207 bool done_; |
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208 bool haveJobsChanged_; |
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209 bool isJobsEngineUnserialized_; |
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210 SharedMessageQueue pendingChanges_; |
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211 boost::thread changeThread_; |
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212 boost::thread saveJobsThread_; |
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213 |
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214 std::unique_ptr<SharedArchive> queryRetrieveArchive_; |
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215 std::string defaultLocalAet_; |
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216 OrthancHttpHandler httpHandler_; |
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217 bool saveJobs_; |
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218 FindStorageAccessMode findStorageAccessMode_; |
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219 unsigned int limitFindInstances_; |
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220 unsigned int limitFindResults_; |
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222 std::unique_ptr<MetricsRegistry> metricsRegistry_; |
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223 bool isHttpServerSecure_; |
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224 bool isExecuteLuaEnabled_; |
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225 bool overwriteInstances_; |
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226 |
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227 std::unique_ptr<StorageCommitmentReports> storageCommitmentReports_; |
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228 |
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229 bool transcodeDicomProtocol_; |
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230 std::unique_ptr<IDicomTranscoder> dcmtkTranscoder_; |
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231 |
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232 StoreStatus StoreAfterTranscoding(std::string& resultPublicId, |
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233 DicomInstanceToStore& dicom, |
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234 StoreInstanceMode mode); |
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235 |
224 | 236 public: |
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237 class DicomCacheLocker : public boost::noncopyable |
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238 { |
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239 private: |
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240 ServerContext& that_; |
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241 ParsedDicomFile *dicom_; |
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242 boost::mutex::scoped_lock lock_; |
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243 |
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244 public: |
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245 DicomCacheLocker(ServerContext& that, |
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246 const std::string& instancePublicId); |
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247 |
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248 ~DicomCacheLocker(); |
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249 |
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250 ParsedDicomFile& GetDicom() |
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251 { |
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252 return *dicom_; |
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253 } |
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254 }; |
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255 |
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256 ServerContext(IDatabaseWrapper& database, |
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257 IStorageArea& area, |
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258 bool unitTesting, |
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259 size_t maxCompletedJobs); |
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260 |
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261 ~ServerContext(); |
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262 |
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263 void SetupJobsEngine(bool unitTesting, |
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264 bool loadJobsFromDatabase); |
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265 |
224 | 266 ServerIndex& GetIndex() |
267 { | |
268 return index_; | |
269 } | |
270 | |
236 | 271 void SetCompressionEnabled(bool enabled); |
272 | |
273 bool IsCompressionEnabled() const | |
274 { | |
275 return compressionEnabled_; | |
276 } | |
277 | |
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278 void RemoveFile(const std::string& fileUuid, |
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279 FileContentType type); |
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280 |
699
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281 bool AddAttachment(const std::string& resourceId, |
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282 FileContentType attachmentType, |
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283 const void* data, |
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284 size_t size); |
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285 |
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286 StoreStatus Store(std::string& resultPublicId, |
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287 DicomInstanceToStore& dicom, |
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288 StoreInstanceMode mode); |
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289 |
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290 void AnswerAttachment(RestApiOutput& output, |
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291 const std::string& resourceId, |
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292 FileContentType content); |
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293 |
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294 void ChangeAttachmentCompression(const std::string& resourceId, |
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295 FileContentType attachmentType, |
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296 CompressionType compression); |
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297 |
2127 | 298 void ReadDicomAsJson(std::string& result, |
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299 const std::string& instancePublicId, |
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300 const std::set<DicomTag>& ignoreTagLength); |
2127 | 301 |
2124 | 302 void ReadDicomAsJson(Json::Value& result, |
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303 const std::string& instancePublicId, |
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304 const std::set<DicomTag>& ignoreTagLength); |
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305 |
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306 void ReadDicomAsJson(std::string& result, |
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307 const std::string& instancePublicId) |
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308 { |
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309 std::set<DicomTag> ignoreTagLength; |
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310 ReadDicomAsJson(result, instancePublicId, ignoreTagLength); |
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311 } |
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312 |
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313 void ReadDicomAsJson(Json::Value& result, |
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314 const std::string& instancePublicId) |
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315 { |
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316 std::set<DicomTag> ignoreTagLength; |
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317 ReadDicomAsJson(result, instancePublicId, ignoreTagLength); |
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318 } |
227
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319 |
2124 | 320 void ReadDicom(std::string& dicom, |
321 const std::string& instancePublicId) | |
322 { | |
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323 ReadAttachment(dicom, instancePublicId, FileContentType_Dicom, true); |
2124 | 324 } |
325 | |
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326 // TODO CACHING MECHANISM AT THIS POINT |
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327 void ReadAttachment(std::string& result, |
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328 const std::string& instancePublicId, |
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329 FileContentType content, |
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330 bool uncompressIfNeeded); |
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331 |
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332 void ReadAttachment(std::string& result, |
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333 const FileInfo& attachment); |
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334 |
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335 void SetStoreMD5ForAttachments(bool storeMD5); |
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336 |
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337 bool IsStoreMD5ForAttachments() const |
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338 { |
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339 return storeMD5_; |
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340 } |
771 | 341 |
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342 JobsEngine& GetJobsEngine() |
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343 { |
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344 return jobsEngine_; |
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345 } |
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346 |
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Plugins can retrieve the path to Orthanc and to its configuration file
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347 bool DeleteResource(Json::Value& target, |
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348 const std::string& uuid, |
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349 ResourceType expectedType); |
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350 |
1198 | 351 void SignalChange(const ServerIndexChange& change); |
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352 |
1368 | 353 SharedArchive& GetQueryRetrieveArchive() |
354 { | |
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355 return *queryRetrieveArchive_; |
1368 | 356 } |
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357 |
2965
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358 SharedArchive& GetMediaArchive() |
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359 { |
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360 return *mediaArchive_; |
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361 } |
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362 |
1427
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363 const std::string& GetDefaultLocalApplicationEntityTitle() const |
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364 { |
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365 return defaultLocalAet_; |
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366 } |
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367 |
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368 LuaScripting& GetLuaScripting() |
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369 { |
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370 return mainLua_; |
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371 } |
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372 |
1444
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373 OrthancHttpHandler& GetHttpHandler() |
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374 { |
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375 return httpHandler_; |
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376 } |
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377 |
1447
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378 void Stop(); |
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379 |
3021
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renamed LookupResource::IVisitor as ServerContext::ILookupVisitor
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380 void Apply(ILookupVisitor& visitor, |
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effectively replacing LookupResource by DatabaseLookup in searches
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381 const DatabaseLookup& lookup, |
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382 ResourceType queryLevel, |
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Argument "Since" in URI "/tools/find" (related to issue 53)
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383 size_t since, |
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|
384 size_t limit); |
1757
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ServerContext::Apply lookup
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385 |
3015
abe49ca61cd5
On C-FIND, avoid accessing the storage area whenever possible
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386 bool LookupOrReconstructMetadata(std::string& target, |
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387 const std::string& publicId, |
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388 MetadataType type); |
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389 |
1434
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390 |
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391 /** |
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392 * Management of the plugins |
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393 **/ |
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394 |
2136
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uniformization of the macro naming
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395 #if ORTHANC_ENABLE_PLUGINS == 1 |
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396 void SetPlugins(OrthancPlugins& plugins); |
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397 |
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398 void ResetPlugins(); |
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399 |
1632
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400 const OrthancPlugins& GetPlugins() const; |
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401 |
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402 OrthancPlugins& GetPlugins(); |
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403 #endif |
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404 |
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405 bool HasPlugins() const; |
2626 | 406 |
407 void AddChildInstances(SetOfInstancesJob& job, | |
408 const std::string& publicId); | |
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409 |
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410 void SignalUpdatedModalities(); |
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411 |
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412 void SignalUpdatedPeers(); |
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413 |
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414 MetricsRegistry& GetMetricsRegistry() |
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415 { |
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416 return *metricsRegistry_; |
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417 } |
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418 |
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419 void SetHttpServerSecure(bool isSecure) |
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420 { |
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421 isHttpServerSecure_ = isSecure; |
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422 } |
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423 |
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424 bool IsHttpServerSecure() const |
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425 { |
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426 return isHttpServerSecure_; |
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427 } |
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428 |
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429 void SetExecuteLuaEnabled(bool enabled) |
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430 { |
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431 isExecuteLuaEnabled_ = enabled; |
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432 } |
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433 |
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434 bool IsExecuteLuaEnabled() const |
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435 { |
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436 return isExecuteLuaEnabled_; |
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437 } |
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438 |
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439 void SetOverwriteInstances(bool overwrite) |
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440 { |
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441 overwriteInstances_ = overwrite; |
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442 } |
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443 |
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444 bool IsOverwriteInstances() const |
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445 { |
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446 return overwriteInstances_; |
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447 } |
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448 |
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449 virtual IStorageCommitmentFactory::ILookupHandler* |
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450 CreateStorageCommitment(const std::string& jobId, |
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451 const std::string& transactionUid, |
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452 const std::vector<std::string>& sopClassUids, |
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453 const std::vector<std::string>& sopInstanceUids, |
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454 const std::string& remoteAet, |
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455 const std::string& calledAet) ORTHANC_OVERRIDE; |
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456 |
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457 StorageCommitmentReports& GetStorageCommitmentReports() |
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458 { |
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459 return *storageCommitmentReports_; |
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460 } |
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461 |
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462 ImageAccessor* DecodeDicomFrame(const std::string& publicId, |
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463 unsigned int frameIndex); |
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464 |
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465 ImageAccessor* DecodeDicomFrame(const DicomInstanceToStore& dicom, |
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466 unsigned int frameIndex); |
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467 |
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468 void StoreWithTranscoding(std::string& sopClassUid, |
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469 std::string& sopInstanceUid, |
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470 DicomStoreUserConnection& connection, |
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471 const std::string& dicom, |
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472 bool hasMoveOriginator, |
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473 const std::string& moveOriginatorAet, |
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474 uint16_t moveOriginatorId); |
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475 |
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476 // This accessor can be used even if the global option |
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477 // "TranscodeDicomProtocol" is set to "false" |
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478 IDicomTranscoder& GetTranscoder(); |
224 | 479 }; |
480 } |