annotate OrthancServer/PrepareDatabase.sql @ 1709:2ad22b2970a2 db-changes

SearchableStudies
author Sebastien Jodogne <s.jodogne@gmail.com>
date Tue, 13 Oct 2015 17:48:30 +0200
parents de1413733c97
children 5ebd6cbb3da8
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1 CREATE TABLE GlobalProperties(
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2 property INTEGER PRIMARY KEY,
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3 value TEXT
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4 );
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5
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6 CREATE TABLE Resources(
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7 internalId INTEGER PRIMARY KEY AUTOINCREMENT,
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8 resourceType INTEGER,
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9 publicId TEXT,
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10 parentId INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE
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11 );
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12
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13 CREATE TABLE MainDicomTags(
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14 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE,
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15 tagGroup INTEGER,
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16 tagElement INTEGER,
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17 value TEXT,
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18 PRIMARY KEY(id, tagGroup, tagElement)
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19 );
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20
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21 -- The following table was added in Orthanc 0.8.5 (database v5)
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22 CREATE TABLE DicomIdentifiers(
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23 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE,
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24 tagGroup INTEGER,
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25 tagElement INTEGER,
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26 value TEXT,
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27 PRIMARY KEY(id, tagGroup, tagElement)
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28 );
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29
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30 -- The following table was added in Orthanc 0.9.5 (database v6)
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31 CREATE TABLE SearchableStudies(
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32 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE,
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33 tagGroup INTEGER,
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34 tagElement INTEGER,
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35 value TEXT, -- assumed to be in upper case
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36 PRIMARY KEY(id, tagGroup, tagElement)
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37 );
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38
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39 CREATE TABLE Metadata(
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40 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE,
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41 type INTEGER,
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42 value TEXT,
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43 PRIMARY KEY(id, type)
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44 );
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45
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46 CREATE TABLE AttachedFiles(
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47 id INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE,
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48 fileType INTEGER,
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49 uuid TEXT,
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50 compressedSize INTEGER,
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51 uncompressedSize INTEGER,
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52 compressionType INTEGER,
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53 uncompressedMD5 TEXT, -- New in Orthanc 0.7.3 (database v4)
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54 compressedMD5 TEXT, -- New in Orthanc 0.7.3 (database v4)
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55 PRIMARY KEY(id, fileType)
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56 );
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57
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58 CREATE TABLE Changes(
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59 seq INTEGER PRIMARY KEY AUTOINCREMENT,
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60 changeType INTEGER,
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61 internalId INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE,
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62 resourceType INTEGER,
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63 date TEXT
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64 );
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65
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66 CREATE TABLE ExportedResources(
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67 seq INTEGER PRIMARY KEY AUTOINCREMENT,
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68 resourceType INTEGER,
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69 publicId TEXT,
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70 remoteModality TEXT,
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71 patientId TEXT,
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72 studyInstanceUid TEXT,
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73 seriesInstanceUid TEXT,
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74 sopInstanceUid TEXT,
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75 date TEXT
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76 );
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77
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78 CREATE TABLE PatientRecyclingOrder(
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79 seq INTEGER PRIMARY KEY AUTOINCREMENT,
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80 patientId INTEGER REFERENCES Resources(internalId) ON DELETE CASCADE
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81 );
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82
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83 CREATE INDEX ChildrenIndex ON Resources(parentId);
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84 CREATE INDEX PublicIndex ON Resources(publicId);
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85 CREATE INDEX ResourceTypeIndex ON Resources(resourceType);
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86 CREATE INDEX PatientRecyclingIndex ON PatientRecyclingOrder(patientId);
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87
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88 CREATE INDEX MainDicomTagsIndex1 ON MainDicomTags(id);
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89 -- The 2 following indexes were removed in Orthanc 0.8.5 (database v5), to speed up
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90 -- CREATE INDEX MainDicomTagsIndex2 ON MainDicomTags(tagGroup, tagElement);
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91 -- CREATE INDEX MainDicomTagsIndexValues ON MainDicomTags(value COLLATE BINARY);
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92
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93 -- The 3 following indexes were added in Orthanc 0.8.5 (database v5)
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94 CREATE INDEX DicomIdentifiersIndex1 ON DicomIdentifiers(id);
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95 CREATE INDEX DicomIdentifiersIndex2 ON DicomIdentifiers(tagGroup, tagElement);
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96 CREATE INDEX DicomIdentifiersIndexValues ON DicomIdentifiers(value COLLATE BINARY);
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97
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98 -- The 2 following indexes were added in Orthanc 0.9.5 (database v6)
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99 CREATE INDEX SearchableStudiesIndex1 ON SearchableStudies(id);
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100 CREATE INDEX SearchableStudiesIndexValues ON SearchableStudies(value COLLATE BINARY);
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101
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102 CREATE INDEX ChangesIndex ON Changes(internalId);
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103
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104 CREATE TRIGGER AttachedFileDeleted
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105 AFTER DELETE ON AttachedFiles
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106 BEGIN
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107 SELECT SignalFileDeleted(old.uuid, old.fileType, old.uncompressedSize,
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108 old.compressionType, old.compressedSize,
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109 -- These 2 arguments are new in Orthanc 0.7.3 (database v4)
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110 old.uncompressedMD5, old.compressedMD5);
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111 END;
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112
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113 CREATE TRIGGER ResourceDeleted
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114 AFTER DELETE ON Resources
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115 BEGIN
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116 SELECT SignalResourceDeleted(old.publicId, old.resourceType); -- New in Orthanc 0.8.5 (db v5)
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117 SELECT SignalRemainingAncestor(parent.publicId, parent.resourceType)
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118 FROM Resources AS parent WHERE internalId = old.parentId;
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119 END;
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120
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121 -- Delete a parent resource when its unique child is deleted
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122 CREATE TRIGGER ResourceDeletedParentCleaning
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123 AFTER DELETE ON Resources
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124 FOR EACH ROW WHEN (SELECT COUNT(*) FROM Resources WHERE parentId = old.parentId) = 0
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125 BEGIN
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126 DELETE FROM Resources WHERE internalId = old.parentId;
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127 END;
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128
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129 CREATE TRIGGER PatientAdded
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130 AFTER INSERT ON Resources
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131 FOR EACH ROW WHEN new.resourceType = 1 -- "1" corresponds to "ResourceType_Patient" in C++
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132 BEGIN
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133 INSERT INTO PatientRecyclingOrder VALUES (NULL, new.internalId);
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134 END;
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135
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136
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137 -- Set the version of the database schema
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138 -- The "1" corresponds to the "GlobalProperty_DatabaseSchemaVersion" enumeration
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139 INSERT INTO GlobalProperties VALUES (1, "6");