Mercurial > hg > orthanc

annotate OrthancServer/ServerIndex.h @ 3200:1f4a2c58e7fa

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author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 06 Feb 2019 13:51:20 +0100
parents 4bbadcd03966
children 94f4a18a79cc
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU General Public License as
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9 * published by the Free Software Foundation, either version 3 of the
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10 * License, or (at your option) any later version.
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11 *
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12 * In addition, as a special exception, the copyright holders of this
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13 * program give permission to link the code of its release with the
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14 * OpenSSL project's "OpenSSL" library (or with modified versions of it
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15 * that use the same license as the "OpenSSL" library), and distribute
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16 * the linked executables. You must obey the GNU General Public License
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17 * in all respects for all of the code used other than "OpenSSL". If you
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18 * modify file(s) with this exception, you may extend this exception to
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19 * your version of the file(s), but you are not obligated to do so. If
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20 * you do not wish to do so, delete this exception statement from your
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21 * version. If you delete this exception statement from all source files
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22 * in the program, then also delete it here.
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23 *
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24 * This program is distributed in the hope that it will be useful, but
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25 * WITHOUT ANY WARRANTY; without even the implied warranty of
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26 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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27 * General Public License for more details.
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28 *
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29 * You should have received a copy of the GNU General Public License
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30 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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31 **/
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33
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34 #pragma once
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35
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36 #include "../Core/Cache/LeastRecentlyUsedIndex.h"
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37 #include "../Core/DicomFormat/DicomMap.h"
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38
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39 #include "Database/IDatabaseWrapper.h"
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40
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41 #include <boost/thread.hpp>
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42 #include <boost/noncopyable.hpp>
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43
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44 namespace Orthanc
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45 {
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46 class DatabaseLookup;
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47 class DicomInstanceToStore;
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48 class ParsedDicomFile;
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49 class ServerContext;
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50
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51 class ServerIndex : public boost::noncopyable
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52 {
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53 public:
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54 typedef std::list<FileInfo> Attachments;
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55 typedef std::map<std::pair<ResourceType, MetadataType>, std::string> MetadataMap;
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56
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57 private:
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58 class Listener;
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59 class Transaction;
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60 class UnstableResourcePayload;
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61 class MainDicomTagsRegistry;
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63 bool done_;
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64 boost::mutex mutex_;
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65 boost::thread flushThread_;
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66 boost::thread unstableResourcesMonitorThread_;
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68 std::auto_ptr<Listener> listener_;
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69 IDatabaseWrapper& db_;
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70 LeastRecentlyUsedIndex<int64_t, UnstableResourcePayload> unstableResources_;
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72 uint64_t maximumStorageSize_;
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73 unsigned int maximumPatients_;
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74 bool overwrite_;
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75 std::auto_ptr<MainDicomTagsRegistry> mainDicomTagsRegistry_;
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77 static void FlushThread(ServerIndex* that,
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78 unsigned int threadSleep);
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80 static void UnstableResourcesMonitorThread(ServerIndex* that,
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81 unsigned int threadSleep);
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82
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83 void MainDicomTagsToJson(Json::Value& result,
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84 int64_t resourceId,
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85 ResourceType resourceType);
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86
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87 bool IsRecyclingNeeded(uint64_t instanceSize);
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88
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89 void Recycle(uint64_t instanceSize,
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90 const std::string& newPatientId);
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91
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92 void StandaloneRecycling();
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94 void MarkAsUnstable(int64_t id,
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95 Orthanc::ResourceType type,
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96 const std::string& publicId);
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97
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98 void LogChange(int64_t internalId,
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99 ChangeType changeType,
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100 ResourceType resourceType,
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101 const std::string& publicId);
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102
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103 void SignalNewResource(ChangeType changeType,
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104 ResourceType level,
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105 const std::string& publicId,
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106 int64_t internalId);
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107
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108 uint64_t IncrementGlobalSequenceInternal(GlobalProperty property);
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109
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110 void NormalizeLookup(std::vector<DatabaseConstraint>& target,
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111 const DatabaseLookup& source,
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112 ResourceType level) const;
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113
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114 SeriesStatus GetSeriesStatus(int64_t id,
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115 int64_t expectedNumberOfInstances);
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116
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117 public:
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118 ServerIndex(ServerContext& context,
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119 IDatabaseWrapper& database,
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120 unsigned int threadSleep);
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121
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122 ~ServerIndex();
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123
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124 void Stop();
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125
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126 uint64_t GetMaximumStorageSize() const
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127 {
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128 return maximumStorageSize_;
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129 }
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130
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131 uint64_t GetMaximumPatientCount() const
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132 {
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133 return maximumPatients_;
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134 }
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135
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136 // "size == 0" means no limit on the storage size
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137 void SetMaximumStorageSize(uint64_t size);
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138
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139 // "count == 0" means no limit on the number of patients
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140 void SetMaximumPatientCount(unsigned int count);
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141
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142 void SetOverwriteInstances(bool overwrite);
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143
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144 StoreStatus Store(std::map<MetadataType, std::string>& instanceMetadata,
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145 DicomInstanceToStore& instance,
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146 const Attachments& attachments);
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147
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148 void GetGlobalStatistics(/* out */ uint64_t& diskSize,
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149 /* out */ uint64_t& uncompressedSize,
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150 /* out */ uint64_t& countPatients,
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151 /* out */ uint64_t& countStudies,
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152 /* out */ uint64_t& countSeries,
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153 /* out */ uint64_t& countInstances);
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154
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155 bool LookupResource(Json::Value& result,
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156 const std::string& publicId,
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157 ResourceType expectedType);
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158
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159 bool LookupAttachment(FileInfo& attachment,
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160 const std::string& instanceUuid,
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161 FileContentType contentType);
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162
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163 void GetAllUuids(std::list<std::string>& target,
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164 ResourceType resourceType);
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165
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166 void GetAllUuids(std::list<std::string>& target,
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167 ResourceType resourceType,
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168 size_t since,
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169 size_t limit);
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170
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171 bool DeleteResource(Json::Value& target /* out */,
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172 const std::string& uuid,
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173 ResourceType expectedType);
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174
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175 void GetChanges(Json::Value& target,
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176 int64_t since,
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177 unsigned int maxResults);
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178
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179 void GetLastChange(Json::Value& target);
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180
231
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181 void LogExportedResource(const std::string& publicId,
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182 const std::string& remoteModality);
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183
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184 void GetExportedResources(Json::Value& target,
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185 int64_t since,
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186 unsigned int maxResults);
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187
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188 void GetLastExportedResource(Json::Value& target);
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189
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190 bool IsProtectedPatient(const std::string& publicId);
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191
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192 void SetProtectedPatient(const std::string& publicId,
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193 bool isProtected);
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194
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195 void GetChildren(std::list<std::string>& result,
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196 const std::string& publicId);
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197
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198 void GetChildInstances(std::list<std::string>& result,
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199 const std::string& publicId);
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200
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201 void SetMetadata(const std::string& publicId,
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202 MetadataType type,
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203 const std::string& value);
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204
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205 void DeleteMetadata(const std::string& publicId,
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206 MetadataType type);
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207
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208 void GetAllMetadata(std::map<MetadataType, std::string>& target,
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209 const std::string& publicId);
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210
306
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211 bool LookupMetadata(std::string& target,
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212 const std::string& publicId,
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213 MetadataType type);
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214
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215 void ListAvailableAttachments(std::list<FileContentType>& target,
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216 const std::string& publicId,
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217 ResourceType expectedType);
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218
306
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219 bool LookupParent(std::string& target,
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220 const std::string& publicId);
310
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221
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222 uint64_t IncrementGlobalSequence(GlobalProperty sequence);
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223
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224 void LogChange(ChangeType changeType,
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225 const std::string& publicId);
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226
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227 void DeleteChanges();
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228
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229 void DeleteExportedResources();
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230
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231 void GetResourceStatistics(/* out */ ResourceType& type,
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232 /* out */ uint64_t& diskSize,
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233 /* out */ uint64_t& uncompressedSize,
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234 /* out */ unsigned int& countStudies,
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235 /* out */ unsigned int& countSeries,
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236 /* out */ unsigned int& countInstances,
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237 /* out */ uint64_t& dicomDiskSize,
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238 /* out */ uint64_t& dicomUncompressedSize,
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239 const std::string& publicId);
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240
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241 void LookupIdentifierExact(std::vector<std::string>& result,
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242 ResourceType level,
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243 const DicomTag& tag,
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244 const std::string& value);
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245
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246 StoreStatus AddAttachment(const FileInfo& attachment,
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247 const std::string& publicId);
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248
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249 void DeleteAttachment(const std::string& publicId,
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250 FileContentType type);
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251
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252 void SetGlobalProperty(GlobalProperty property,
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253 const std::string& value);
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254
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255 bool LookupGlobalProperty(std::string& value,
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256 GlobalProperty property);
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257
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258 std::string GetGlobalProperty(GlobalProperty property,
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259 const std::string& defaultValue);
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260
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261 bool GetMainDicomTags(DicomMap& result,
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262 const std::string& publicId,
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263 ResourceType expectedType,
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diff changeset
264 ResourceType levelOfInterest);
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265
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266 // Only applicable at the instance level
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267 bool GetAllMainDicomTags(DicomMap& result,
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268 const std::string& instancePublicId);
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269
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270 bool LookupResourceType(ResourceType& type,
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271 const std::string& publicId);
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272
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273 unsigned int GetDatabaseVersion();
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274
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275 bool LookupParent(std::string& target,
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276 const std::string& publicId,
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277 ResourceType parentType);
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278
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279 void ReconstructInstance(ParsedDicomFile& dicom);
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280
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281 void ApplyLookupResources(std::vector<std::string>& resourcesId,
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282 std::vector<std::string>* instancesId, // Can be NULL if not needed
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283 const DatabaseLookup& lookup,
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284 ResourceType queryLevel,
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285 size_t limit);
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286 };
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287 }