Mercurial > hg > orthanc

annotate OrthancServer/Sources/ServerJobs/ResourceModificationJob.cpp @ 5137:15109c3f0f7d

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added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
author Alain Mazy <am@osimis.io>
date Wed, 18 Jan 2023 17:58:51 +0100
parents e71b22a43c0b
children 021d7fdcb659
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1 /**
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2 * Orthanc - A Lightweight, RESTful DICOM Store
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2022 Osimis S.A., Belgium
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6 * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
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7 *
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8 * This program is free software: you can redistribute it and/or
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9 * modify it under the terms of the GNU General Public License as
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10 * published by the Free Software Foundation, either version 3 of the
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11 * License, or (at your option) any later version.
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12 *
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13 * This program is distributed in the hope that it will be useful, but
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14 * WITHOUT ANY WARRANTY; without even the implied warranty of
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15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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16 * General Public License for more details.
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17 *
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18 * You should have received a copy of the GNU General Public License
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19 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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20 **/
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21
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22
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23 #include "../PrecompiledHeadersServer.h"
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24 #include "ResourceModificationJob.h"
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25
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26 #include "../../../OrthancFramework/Sources/Logging.h"
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27 #include "../../../OrthancFramework/Sources/SerializationToolbox.h"
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28 #include "../ServerContext.h"
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29
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30 #include <dcmtk/dcmdata/dcfilefo.h>
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31 #include <dcmtk/dcmdata/dcdeftag.h>
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32 #include <cassert>
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33
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34 namespace Orthanc
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35 {
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36 static void FormatResource(Json::Value& target,
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37 ResourceType level,
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38 const std::string& id)
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39 {
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40 target["Type"] = EnumerationToString(level);
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41 target["ID"] = id;
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42 target["Path"] = GetBasePath(level, id);
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43 }
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44
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45 class ResourceModificationJob::SingleOutput : public IOutput
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46 {
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47 private:
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48 ResourceType level_;
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49 bool isFirst_;
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50 std::string id_;
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51 std::string patientId_;
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52
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53 public:
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54 explicit SingleOutput(ResourceType level) :
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55 level_(level),
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56 isFirst_(true)
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57 {
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58 if (level_ != ResourceType_Patient &&
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59 level_ != ResourceType_Study &&
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60 level_ != ResourceType_Series)
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61 {
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62 throw OrthancException(ErrorCode_ParameterOutOfRange);
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63 }
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64 }
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65
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66 virtual void Update(DicomInstanceHasher& hasher) ORTHANC_OVERRIDE
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67 {
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68 if (isFirst_)
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69 {
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70 switch (level_)
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71 {
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72 case ResourceType_Series:
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73 id_ = hasher.HashSeries();
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74 break;
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75
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76 case ResourceType_Study:
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77 id_ = hasher.HashStudy();
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78 break;
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79
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80 case ResourceType_Patient:
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81 id_ = hasher.HashPatient();
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82 break;
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83
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84 default:
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85 throw OrthancException(ErrorCode_InternalError);
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86 }
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87
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88 patientId_ = hasher.HashPatient();
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89 isFirst_ = false;
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90 }
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91 }
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92
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93 virtual void Format(Json::Value& target) const ORTHANC_OVERRIDE
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94 {
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95 assert(target.type() == Json::objectValue);
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96
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97 if (!isFirst_)
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98 {
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99 FormatResource(target, level_, id_);
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100 target["PatientID"] = patientId_;
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101 }
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102 }
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103
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104 virtual bool IsSingleResource() const ORTHANC_OVERRIDE
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105 {
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106 return true;
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107 }
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108
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109 ResourceType GetLevel() const
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110 {
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111 return level_;
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112 }
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113 };
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114
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115
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116 class ResourceModificationJob::MultipleOutputs : public IOutput
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117 {
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118 private:
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119 static void FormatResources(Json::Value& target,
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120 ResourceType level,
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121 const std::set<std::string>& resources)
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122 {
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123 assert(target.type() == Json::arrayValue);
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124
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125 for (std::set<std::string>::const_iterator
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126 it = resources.begin(); it != resources.end(); ++it)
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127 {
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128 Json::Value item = Json::objectValue;
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129 FormatResource(item, level, *it);
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130 target.append(item);
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131 }
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132 }
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133
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134 std::set<std::string> instances_;
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135 std::set<std::string> series_;
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136 std::set<std::string> studies_;
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137 std::set<std::string> patients_;
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138
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139 public:
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140 virtual void Update(DicomInstanceHasher& hasher) ORTHANC_OVERRIDE
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141 {
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142 instances_.insert(hasher.HashInstance());
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143 series_.insert(hasher.HashSeries());
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144 studies_.insert(hasher.HashStudy());
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145 patients_.insert(hasher.HashPatient());
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146 }
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147
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148 virtual void Format(Json::Value& target) const ORTHANC_OVERRIDE
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149 {
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150 assert(target.type() == Json::objectValue);
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151 Json::Value resources = Json::arrayValue;
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152 FormatResources(resources, ResourceType_Instance, instances_);
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153 FormatResources(resources, ResourceType_Series, series_);
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154 FormatResources(resources, ResourceType_Study, studies_);
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155 FormatResources(resources, ResourceType_Patient, patients_);
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156 target["Resources"] = resources;
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157 }
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158
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159 virtual bool IsSingleResource() const ORTHANC_OVERRIDE
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160 {
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161 return false;
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162 }
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163 };
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164
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165 // Reset is called when resubmitting a failed job
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166 void ResourceModificationJob::Reset()
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167 {
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168 boost::recursive_mutex::scoped_lock lock(mutex_);
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169
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170 // TODO: cleanup the instances that have been generated during the previous run
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171 modifiedSeries_.clear();
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172 instancesToReconstruct_.clear();
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173
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174 ThreadedSetOfInstancesJob::Reset();
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175 }
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176
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177 void ResourceModificationJob::PostProcessInstances()
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178 {
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179 boost::recursive_mutex::scoped_lock lock(mutex_);
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180
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181 // reconstruct the parents MainDicomTags in case one of them has changed
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182 if (instancesToReconstruct_.size() > 0)
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183 {
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184 for (std::set<std::string>::const_iterator it = instancesToReconstruct_.begin(); it != instancesToReconstruct_.end(); ++it)
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185 {
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186 ServerContext::DicomCacheLocker locker(GetContext(), *it);
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187 ParsedDicomFile& modifiedDicom = locker.GetDicom();
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188
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189 GetContext().GetIndex().ReconstructInstance(modifiedDicom);
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190 }
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191 }
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192
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193 }
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194
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195 bool ResourceModificationJob::HandleInstance(const std::string& instance)
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196 {
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197 if (modification_.get() == NULL ||
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198 output_.get() == NULL)
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199 {
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200 throw OrthancException(ErrorCode_BadSequenceOfCalls,
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201 "No modification was provided for this job");
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202 }
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203
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204
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205 LOG(INFO) << "Modifying instance in a job: " << instance;
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206
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207 /**
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208 * Retrieve the original instance from the DICOM cache.
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209 **/
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210
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211 std::unique_ptr<DicomInstanceHasher> originalHasher;
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212 std::unique_ptr<ParsedDicomFile> modified;
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213
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214 try
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215 {
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216 ServerContext::DicomCacheLocker locker(GetContext(), instance);
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217 ParsedDicomFile& original = locker.GetDicom();
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218
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219 originalHasher.reset(new DicomInstanceHasher(original.GetHasher()));
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220 modified.reset(original.Clone(true));
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221 }
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222 catch (OrthancException& e)
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223 {
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224 LOG(WARNING) << "An error occurred while executing a Modification job on instance " << instance << ": " << e.GetDetails();
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225 return false;
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226 }
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227
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228
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229 /**
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230 * Compute the resulting DICOM instance.
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231 **/
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232
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233 modification_->Apply(*modified);
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234
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235 const std::string modifiedUid = IDicomTranscoder::GetSopInstanceUid(modified->GetDcmtkObject());
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236
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diff changeset
237 if (transcode_)
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238 {
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239 std::set<DicomTransferSyntax> syntaxes;
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240 syntaxes.insert(transferSyntax_);
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241
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242 IDicomTranscoder::DicomImage source;
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diff changeset
243 source.AcquireParsed(*modified); // "modified" is invalid below this point
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diff changeset
244
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245 IDicomTranscoder::DicomImage transcoded;
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diff changeset
246 if (GetContext().Transcode(transcoded, source, syntaxes, true))
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diff changeset
247 {
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248 modified.reset(transcoded.ReleaseAsParsedDicomFile());
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249
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250 // Fix the SOP instance UID in order the preserve the
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251 // references between instance UIDs in the DICOM hierarchy
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252 // (the UID might have changed in the case of lossy transcoding)
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253 if (modified.get() == NULL ||
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254 modified->GetDcmtkObject().getDataset() == NULL ||
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255 !modified->GetDcmtkObject().getDataset()->putAndInsertString(
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diff changeset
256 DCM_SOPInstanceUID, modifiedUid.c_str(), OFTrue /* replace */).good())
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257 {
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258 throw OrthancException(ErrorCode_InternalError);
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259 }
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260 }
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diff changeset
261 else
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262 {
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diff changeset
263 LOG(WARNING) << "Cannot transcode instance, keeping original transfer syntax: " << instance;
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parents: 3943
diff changeset
264 modified.reset(source.ReleaseAsParsedDicomFile());
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
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265 }
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266 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
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diff changeset
267
3948
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
268 assert(modifiedUid == IDicomTranscoder::GetSopInstanceUid(modified->GetDcmtkObject()));
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
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parents: 3945
diff changeset
269
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diff changeset
270 std::unique_ptr<DicomInstanceToStore> toStore(DicomInstanceToStore::CreateFromParsedDicomFile(*modified));
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
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diff changeset
271 toStore->SetOrigin(origin_);
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272
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273
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274 /**
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275 * Prepare the metadata information to associate with the
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276 * resulting DICOM instance (AnonymizedFrom/ModifiedFrom).
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277 **/
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278
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279 DicomInstanceHasher modifiedHasher = modified->GetHasher();
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280
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281 MetadataType metadataType = (isAnonymization_ ?
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282 MetadataType_AnonymizedFrom :
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283 MetadataType_ModifiedFrom);
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284
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
285 if (originalHasher->HashSeries() != modifiedHasher.HashSeries())
2642
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parents:
diff changeset
286 {
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8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
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diff changeset
287 toStore->AddMetadata(ResourceType_Series, metadataType, originalHasher->HashSeries());
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288 }
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289
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
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parents: 2664
diff changeset
290 if (originalHasher->HashStudy() != modifiedHasher.HashStudy())
2642
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291 {
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8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
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diff changeset
292 toStore->AddMetadata(ResourceType_Study, metadataType, originalHasher->HashStudy());
2642
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293 }
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294
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
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295 if (originalHasher->HashPatient() != modifiedHasher.HashPatient())
2642
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parents:
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296 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
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diff changeset
297 toStore->AddMetadata(ResourceType_Patient, metadataType, originalHasher->HashPatient());
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parents:
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298 }
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299
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
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parents: 2664
diff changeset
300 assert(instance == originalHasher->HashInstance());
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
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parents: 4437
diff changeset
301 toStore->AddMetadata(ResourceType_Instance, metadataType, instance);
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parents:
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302
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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303
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parents:
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304 /**
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parents:
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305 * Store the resulting DICOM instance into the Orthanc store.
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306 **/
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
307
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parents:
diff changeset
308 std::string modifiedInstance;
4796
94616af363ec added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents: 4693
diff changeset
309 ServerContext::StoreResult result = GetContext().Store(modifiedInstance, *toStore, StoreInstanceMode_Default);
5134
6aa41d86b948 fix ModificationJob state machine
Alain Mazy <am@osimis.io>
parents: 5130
diff changeset
310 if (result.GetStatus() != StoreStatus_Success && result.GetStatus() != StoreStatus_AlreadyStored) // when retrying a job, we might save the same data again
2642
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parents:
diff changeset
311 {
2955
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parents: 2868
diff changeset
312 throw OrthancException(ErrorCode_CannotStoreInstance,
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parents: 2868
diff changeset
313 "Error while storing a modified instance " + instance);
2642
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parents:
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314 }
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parents:
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315
3938
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parents: 3814
diff changeset
316 /**
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parents: 3814
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317 * The assertion below will fail if automated transcoding to a
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
318 * lossy transfer syntax is enabled in the Orthanc core, and if
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
319 * the source instance is not in this transfer syntax.
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
320 **/
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
321 // assert(modifiedInstance == modifiedHasher.HashInstance());
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322
5130
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
323 {
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
324 boost::recursive_mutex::scoped_lock lock(outputMutex_);
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
325
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
326 output_->Update(modifiedHasher);
5137
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
327 if (modifiedSeries_.find(modifiedHasher.HashSeries()) == modifiedSeries_.end())
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
328 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
329 modifiedSeries_.insert(modifiedHasher.HashSeries());
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
330 // add an instance to reconstruct for each series
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
331 instancesToReconstruct_.insert(modifiedHasher.HashInstance());
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
332 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
333
5130
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
334 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
335
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
336 return true;
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parents:
diff changeset
337 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
338
2842
ff0ed5ea9e4e trailing step in SetOfInstancesJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
339
5130
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
340 ResourceModificationJob::ResourceModificationJob(ServerContext& context, unsigned int workersCount) :
5136
e71b22a43c0b Threaded modifications continued: call ReconstructInstance at the end of the modification to update the DB model
Alain Mazy <am@osimis.io>
parents: 5134
diff changeset
341 ThreadedSetOfInstancesJob(context, true /* post processing step */, true /* by default, keep source */, workersCount),
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
342 isAnonymization_(false),
4206
171af1567473 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4205
diff changeset
343 transcode_(false),
171af1567473 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4205
diff changeset
344 transferSyntax_(DicomTransferSyntax_LittleEndianExplicit) // dummy initialization
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
345 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
346 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
347
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
348
4693
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Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
349 void ResourceModificationJob::SetSingleResourceModification(DicomModification* modification,
45bce660ce3a added routes for bulk anonymization/modification
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parents: 4508
diff changeset
350 ResourceType outputLevel,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
351 bool isAnonymization)
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
352 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
353 if (modification == NULL)
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
354 {
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parents:
diff changeset
355 throw OrthancException(ErrorCode_NullPointer);
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
356 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
357 else if (IsStarted())
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
358 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
359 throw OrthancException(ErrorCode_BadSequenceOfCalls);
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
360 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
361 else
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
362 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
363 modification_.reset(modification);
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
364 output_.reset(new SingleOutput(outputLevel));
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
365 isAnonymization_ = isAnonymization;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
366 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
367 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
368
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
369
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
370 void ResourceModificationJob::SetMultipleResourcesModification(DicomModification* modification,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
371 bool isAnonymization)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
372 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
373 if (modification == NULL)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
374 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
375 throw OrthancException(ErrorCode_NullPointer);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
376 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
377 else if (IsStarted())
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
378 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
379 throw OrthancException(ErrorCode_BadSequenceOfCalls);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
380 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
381 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
382 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
383 modification_.reset(modification);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
384 output_.reset(new MultipleOutputs);
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
385 isAnonymization_ = isAnonymization;
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
386 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
387 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
388
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
389
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
390 void ResourceModificationJob::SetOrigin(const DicomInstanceOrigin& origin)
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
391 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
392 if (IsStarted())
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
393 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
394 throw OrthancException(ErrorCode_BadSequenceOfCalls);
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
395 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
396 else
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
397 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
398 origin_ = origin;
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
399 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
400 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
401
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
402
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
403 void ResourceModificationJob::SetOrigin(const RestApiCall& call)
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
404 {
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
405 SetOrigin(DicomInstanceOrigin::FromRest(call));
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
406 }
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
407
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
408
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
409 const DicomModification& ResourceModificationJob::GetModification() const
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
410 {
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
411 if (modification_.get() == NULL)
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
412 {
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
413 throw OrthancException(ErrorCode_BadSequenceOfCalls);
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
414 }
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
415 else
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
416 {
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
417 return *modification_;
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
418 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
419 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
420
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
421
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
422 DicomTransferSyntax ResourceModificationJob::GetTransferSyntax() const
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
423 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
424 if (transcode_)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
425 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
426 return transferSyntax_;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
427 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
428 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
429 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
430 throw OrthancException(ErrorCode_BadSequenceOfCalls);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
431 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
432 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
433
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
434
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
435 void ResourceModificationJob::SetTranscode(DicomTransferSyntax syntax)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
436 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
437 if (IsStarted())
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
438 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
439 throw OrthancException(ErrorCode_BadSequenceOfCalls);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
440 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
441 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
442 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
443 transcode_ = true;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
444 transferSyntax_ = syntax;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
445 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
446 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
447
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
448
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
449 void ResourceModificationJob::SetTranscode(const std::string& transferSyntaxUid)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
450 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
451 DicomTransferSyntax s;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
452 if (LookupTransferSyntax(s, transferSyntaxUid))
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
453 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
454 SetTranscode(s);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
455 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
456 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
457 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
458 throw OrthancException(ErrorCode_BadFileFormat,
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
459 "Unknown transfer syntax UID: " + transferSyntaxUid);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
460 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
461 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
462
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
463
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
464 void ResourceModificationJob::ClearTranscode()
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
465 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
466 if (IsStarted())
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
467 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
468 throw OrthancException(ErrorCode_BadSequenceOfCalls);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
469 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
470 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
471 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
472 transcode_ = false;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
473 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
474 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
475
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
476
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
477 bool ResourceModificationJob::IsSingleResourceModification() const
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
478 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
479 if (modification_.get() == NULL)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
480 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
481 assert(output_.get() == NULL);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
482 throw OrthancException(ErrorCode_BadSequenceOfCalls);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
483 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
484 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
485 {
5130
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
486 boost::recursive_mutex::scoped_lock lock(outputMutex_);
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
487
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
488 assert(output_.get() != NULL);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
489 return output_->IsSingleResource();
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
490 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
491 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
492
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
493
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
494 ResourceType ResourceModificationJob::GetOutputLevel() const
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
495 {
5130
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
496 boost::recursive_mutex::scoped_lock lock(outputMutex_);
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
497
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
498 if (IsSingleResourceModification())
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
499 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
500 assert(modification_.get() != NULL &&
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
501 output_.get() != NULL);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
502 return dynamic_cast<const SingleOutput&>(*output_).GetLevel();
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
503 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
504 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
505 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
506 // Not applicable if multiple resources
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
507 throw OrthancException(ErrorCode_BadSequenceOfCalls);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
508 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
509 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
510
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
511
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
512 void ResourceModificationJob::GetPublicContent(Json::Value& value)
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
513 {
5130
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
514 boost::recursive_mutex::scoped_lock lock(outputMutex_);
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
515
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
516 ThreadedSetOfInstancesJob::GetPublicContent(value);
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
517
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
518 value["IsAnonymization"] = isAnonymization_;
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
519
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
520 if (output_.get() != NULL)
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
521 {
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
522 output_->Format(value);
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
523 }
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
524
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
525 if (transcode_)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
526 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
527 value["Transcode"] = GetTransferSyntaxUid(transferSyntax_);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
528 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
529 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
530
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
531
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
532 static const char* MODIFICATION = "Modification";
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
533 static const char* ORIGIN = "Origin";
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
534 static const char* IS_ANONYMIZATION = "IsAnonymization";
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
535 static const char* TRANSCODE = "Transcode";
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
536 static const char* OUTPUT_LEVEL = "OutputLevel";
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
537 static const char* IS_SINGLE_RESOURCE = "IsSingleResource";
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
538
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
539
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
540 ResourceModificationJob::ResourceModificationJob(ServerContext& context,
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
541 const Json::Value& serialized) :
5130
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
542 ThreadedSetOfInstancesJob(context, serialized, false /* no post processing step */, true /* by default, keep source */),
4223
3d6f14a05db1 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4206
diff changeset
543 transferSyntax_(DicomTransferSyntax_LittleEndianExplicit) // dummy initialization
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
544 {
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
545 assert(serialized.type() == Json::objectValue);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
546
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
547 origin_ = DicomInstanceOrigin(serialized[ORIGIN]);
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
548
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
549 if (serialized.isMember(TRANSCODE))
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
550 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
551 SetTranscode(SerializationToolbox::ReadString(serialized, TRANSCODE));
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
552 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
553 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
554 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
555 transcode_ = false;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
556 }
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
557
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
558 bool isSingleResource;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
559 if (serialized.isMember(IS_SINGLE_RESOURCE))
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
560 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
561 isSingleResource = SerializationToolbox::ReadBoolean(serialized, IS_SINGLE_RESOURCE);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
562 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
563 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
564 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
565 isSingleResource = true; // Backward compatibility with Orthanc <= 1.9.3
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
566 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
567
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
568 bool isAnonymization = SerializationToolbox::ReadBoolean(serialized, IS_ANONYMIZATION);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
569 std::unique_ptr<DicomModification> modification(new DicomModification(serialized[MODIFICATION]));
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
570
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
571 if (isSingleResource)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
572 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
573 ResourceType outputLevel;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
574
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
575 if (serialized.isMember(OUTPUT_LEVEL))
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
576 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
577 // New in Orthanc 1.9.4. This fixes an *incorrect* behavior in
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
578 // Orthanc <= 1.9.3, in which "outputLevel" would be set to
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
579 // "modification->GetLevel()"
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
580 outputLevel = StringToResourceType(SerializationToolbox::ReadString(serialized, OUTPUT_LEVEL).c_str());
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
581 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
582 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
583 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
584 // Use the buggy convention from Orthanc <= 1.9.3 (which is
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
585 // the only thing we have at hand)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
586 outputLevel = modification->GetLevel();
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
587
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
588 if (outputLevel == ResourceType_Instance)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
589 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
590 // This should never happen, but as "SingleOutput" doesn't
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
591 // support instance-level anonymization, don't take any risk
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
592 // and choose an arbitrary output level
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
593 outputLevel = ResourceType_Patient;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
594 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
595 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
596
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
597 SetSingleResourceModification(modification.release(), outputLevel, isAnonymization);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
598 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
599 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
600 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
601 // New in Orthanc 1.9.4
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
602 SetMultipleResourcesModification(modification.release(), isAnonymization);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
603 }
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
604 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
605
2663
228e2783ce83 some jobs might not be serializable
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2648
diff changeset
606 bool ResourceModificationJob::Serialize(Json::Value& value)
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
607 {
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
608 if (modification_.get() == NULL)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
609 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
610 throw OrthancException(ErrorCode_BadSequenceOfCalls);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
611 }
5130
f2dcdbe05884 ResourceModification jobs can now use multiple threads
Alain Mazy <am@osimis.io>
parents: 4892
diff changeset
612 else if (!ThreadedSetOfInstancesJob::Serialize(value))
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
613 {
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
614 return false;
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
615 }
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
616 else
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
617 {
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
618 assert(value.type() == Json::objectValue);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
619
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
620 value[IS_ANONYMIZATION] = isAnonymization_;
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
621
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
622 if (transcode_)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
623 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
624 value[TRANSCODE] = GetTransferSyntaxUid(transferSyntax_);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
625 }
5137
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
626
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
627 origin_.Serialize(value[ORIGIN]);
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
628
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
629 Json::Value tmp;
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
630 modification_->Serialize(tmp);
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
631 value[MODIFICATION] = tmp;
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
632
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
633 // New in Orthanc 1.9.4
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
634 value[IS_SINGLE_RESOURCE] = IsSingleResourceModification();
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
635 if (IsSingleResourceModification())
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
636 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
637 value[OUTPUT_LEVEL] = EnumerationToString(GetOutputLevel());
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
638 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
639
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
640 return true;
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
641 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
642 }
5137
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
643
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
644 void ResourceModificationJob::PerformSanityChecks()
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
645 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
646 boost::recursive_mutex::scoped_lock lock(mutex_); // because we access the parentResources_
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
647
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
648 std::set<DicomTag> emptyRequestedTags;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
649
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
650 if (modification_.get() == NULL)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
651 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
652 throw OrthancException(ErrorCode_BadSequenceOfCalls);
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
653 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
654
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
655 bool replacePatientMainDicomTags = false;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
656 bool replaceStudyMainDicomTags = false;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
657 bool replaceSeriesMainDicomTags = false;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
658 bool replaceInstanceMainDicomTags = false;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
659
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
660 ResourceType modificationLevel = modification_->GetLevel();
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
661 std::set<DicomTag> replacedTags;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
662 modification_->GetReplacedTags(replacedTags);
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
663
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
664 for (std::set<DicomTag>::const_iterator it = replacedTags.begin(); it != replacedTags.end(); it++)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
665 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
666 replacePatientMainDicomTags |= DicomMap::IsMainDicomTag(*it, ResourceType_Patient);
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
667 replaceStudyMainDicomTags |= DicomMap::IsMainDicomTag(*it, ResourceType_Study);
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
668 replaceSeriesMainDicomTags |= DicomMap::IsMainDicomTag(*it, ResourceType_Series);
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
669 replaceInstanceMainDicomTags |= DicomMap::IsMainDicomTag(*it, ResourceType_Instance);
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
670 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
671
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
672 if (modification_->IsKept(DICOM_TAG_SOP_INSTANCE_UID) && !IsKeepSource())
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
673 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
674 // note: we could refine this criteria -> this is valid only if all DicomUIDs are kept identical (but this can happen through Keep or Replace options)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
675 throw OrthancException(ErrorCode_BadRequest,
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
676 "When keeping SOPInstanceUID tag, you must set KeepSource to true to avoid deleting the modified files at the end of the process");
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
677 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
678
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
679 if (modificationLevel == ResourceType_Study && replacePatientMainDicomTags)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
680 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
681 for (std::set<std::string>::const_iterator studyId = parentResources_.begin(); studyId != parentResources_.end(); ++studyId)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
682 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
683 // When modifying a study, you may not modify patient tags as you wish.
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
684 // - If this is the patient's only study, you may modify all patient tags. This could be performed in 2 steps (modify the patient and then, the study) but,
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
685 // for many use cases, it's helpful to be able to do it one step (e.g, to modify a name in a study that has just been acquired)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
686 // - If the patient already has other studies, you may only 'attach' the study to an existing patient by modifying
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
687 // all patient tags from the study to match those of the target patient.
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
688 // - Otherwise, you can't modify the patient tags
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
689
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
690 std::string targetPatientId;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
691 if (modification_->IsReplaced(DICOM_TAG_PATIENT_ID))
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
692 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
693 targetPatientId = modification_->GetReplacementAsString(DICOM_TAG_PATIENT_ID);
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
694 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
695 else
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
696 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
697 ExpandedResource originalStudy;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
698 if (GetContext().GetIndex().ExpandResource(originalStudy, *studyId, ResourceType_Study, emptyRequestedTags, ExpandResourceDbFlags_IncludeMainDicomTags))
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
699 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
700 targetPatientId = originalStudy.tags_.GetStringValue(DICOM_TAG_PATIENT_ID, "", false);
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
701 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
702 else
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
703 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
704 throw OrthancException(ErrorCode_UnknownResource, "Study not found");
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
705 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
706 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
707
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
708 // try to find the targetPatient
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
709 std::vector<std::string> lookupPatientResult;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
710 GetContext().GetIndex().LookupIdentifierExact(lookupPatientResult, ResourceType_Patient, DICOM_TAG_PATIENT_ID, targetPatientId);
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
711
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
712 // if the patient exists, check how many child studies it has.
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
713 if (lookupPatientResult.size() >= 1)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
714 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
715 ExpandedResource targetPatient;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
716
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
717 if (GetContext().GetIndex().ExpandResource(targetPatient, lookupPatientResult[0], ResourceType_Patient, emptyRequestedTags, static_cast<ExpandResourceDbFlags>(ExpandResourceDbFlags_IncludeMainDicomTags | ExpandResourceDbFlags_IncludeChildren)))
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
718 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
719 const std::list<std::string> childrenIds = targetPatient.childrenIds_;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
720 bool targetPatientHasOtherStudies = childrenIds.size() > 1;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
721 if (childrenIds.size() == 1)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
722 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
723 targetPatientHasOtherStudies = std::find(childrenIds.begin(), childrenIds.end(), *studyId) == childrenIds.end(); // if the patient has one study that is not the one being modified
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
724 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
725
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
726 if (targetPatientHasOtherStudies)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
727 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
728 // this is allowed if all patient replacedTags do match the target patient tags
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
729 DicomMap targetPatientTags;
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
730 targetPatient.tags_.ExtractPatientInformation(targetPatientTags);
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
731
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
732 for (std::set<DicomTag>::const_iterator mainPatientTag = DicomMap::GetMainDicomTags(ResourceType_Patient).begin();
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
733 mainPatientTag != DicomMap::GetMainDicomTags(ResourceType_Patient).end(); ++mainPatientTag)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
734 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
735 if (targetPatientTags.HasTag(*mainPatientTag)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
736 && (!modification_->IsReplaced(*mainPatientTag)
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
737 || modification_->GetReplacementAsString(*mainPatientTag) != targetPatientTags.GetStringValue(*mainPatientTag, "", false)))
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
738 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
739 throw OrthancException(ErrorCode_BadRequest, std::string("Trying to change patient tags in a study. The Patient already exists and has other studies. All the 'Replace' tags should match the existing patient main dicom tags. Try using /patients/../modify instead to modify the patient. Failing tag: ") + mainPatientTag->Format());
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
740 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
741 else if (!targetPatientTags.HasTag(*mainPatientTag) && modification_->IsReplaced(*mainPatientTag) )
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
742 {
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
743 throw OrthancException(ErrorCode_BadRequest, std::string("Trying to change patient tags in a study. The Patient already exists and has other studies. You are trying to replace a tag that is not defined yet in this patient. Try using /patients/../modify instead to modify the patient. Failing tag: ") + mainPatientTag->Format());
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
744 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
745 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
746 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
747 // TODO: need reconstruct_
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
748 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
749 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
750 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
751
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
752 }
15109c3f0f7d added sanity checks in DicomModificationJob + automatically reconstruct resources at the end of a DicomModificationJob
Alain Mazy <am@osimis.io>
parents: 5136
diff changeset
753 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
754 }