Mercurial > hg > orthanc

annotate OrthancServer/Sources/ServerJobs/ResourceModificationJob.cpp @ 4892:6eff25f70121 openssl-3.x

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
integration mainline->openssl-3.x
author Sebastien Jodogne <s.jodogne@gmail.com>
date Sun, 20 Feb 2022 11:14:34 +0100
parents 2e71a08eea15 43e613a7756b
children f2dcdbe05884
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2 * Orthanc - A Lightweight, RESTful DICOM Store
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
4 * Department, University Hospital of Liege, Belgium
4870
43e613a7756b upgrade to year 2022
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4831
diff changeset
5 * Copyright (C) 2017-2022 Osimis S.A., Belgium
43e613a7756b upgrade to year 2022
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4831
diff changeset
6 * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 *
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
8 * This program is free software: you can redistribute it and/or
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 * modify it under the terms of the GNU General Public License as
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 * published by the Free Software Foundation, either version 3 of the
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
11 * License, or (at your option) any later version.
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
12 *
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 * This program is distributed in the hope that it will be useful, but
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
14 * WITHOUT ANY WARRANTY; without even the implied warranty of
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
15 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
16 * General Public License for more details.
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
17 *
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
18 * You should have received a copy of the GNU General Public License
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
19 * along with this program. If not, see <http://www.gnu.org/licenses/>.
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
20 **/
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23 #include "../PrecompiledHeadersServer.h"
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24 #include "ResourceModificationJob.h"
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25
4045
05b8fd21089c fix path
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
26 #include "../../../OrthancFramework/Sources/Logging.h"
05b8fd21089c fix path
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4044
diff changeset
27 #include "../../../OrthancFramework/Sources/SerializationToolbox.h"
3095
beeeb6096f27 removing dependencies upon ServerContext
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3060
diff changeset
28 #include "../ServerContext.h"
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
30 #include <dcmtk/dcmdata/dcfilefo.h>
3948
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
31 #include <dcmtk/dcmdata/dcdeftag.h>
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
32 #include <cassert>
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
33
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34 namespace Orthanc
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35 {
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
36 static void FormatResource(Json::Value& target,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
37 ResourceType level,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
38 const std::string& id)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
39 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
40 target["Type"] = EnumerationToString(level);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
41 target["ID"] = id;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
42 target["Path"] = GetBasePath(level, id);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
43 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
44
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
45 class ResourceModificationJob::SingleOutput : public IOutput
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
46 {
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
47 private:
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
48 ResourceType level_;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
49 bool isFirst_;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
50 std::string id_;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
51 std::string patientId_;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
52
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
53 public:
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
54 explicit SingleOutput(ResourceType level) :
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
55 level_(level),
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
56 isFirst_(true)
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
57 {
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
58 if (level_ != ResourceType_Patient &&
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
59 level_ != ResourceType_Study &&
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
60 level_ != ResourceType_Series)
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
61 {
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
62 throw OrthancException(ErrorCode_ParameterOutOfRange);
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
63 }
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
64 }
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
65
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
66 virtual void Update(DicomInstanceHasher& hasher) ORTHANC_OVERRIDE
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
67 {
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
68 if (isFirst_)
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
69 {
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
70 switch (level_)
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
71 {
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
72 case ResourceType_Series:
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
73 id_ = hasher.HashSeries();
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
74 break;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
75
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
76 case ResourceType_Study:
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
77 id_ = hasher.HashStudy();
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
78 break;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
79
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
80 case ResourceType_Patient:
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
81 id_ = hasher.HashPatient();
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
82 break;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
83
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
84 default:
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
85 throw OrthancException(ErrorCode_InternalError);
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
86 }
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
87
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
88 patientId_ = hasher.HashPatient();
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
89 isFirst_ = false;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
90 }
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
91 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
92
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
93 virtual void Format(Json::Value& target) const ORTHANC_OVERRIDE
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
94 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
95 assert(target.type() == Json::objectValue);
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
96
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
97 if (!isFirst_)
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
98 {
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
99 FormatResource(target, level_, id_);
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
100 target["PatientID"] = patientId_;
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
101 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
102 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
103
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
104 virtual bool IsSingleResource() const ORTHANC_OVERRIDE
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
105 {
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
106 return true;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
107 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
108
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
109 ResourceType GetLevel() const
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
110 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
111 return level_;
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
112 }
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
113 };
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
114
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
115
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
116 class ResourceModificationJob::MultipleOutputs : public IOutput
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
117 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
118 private:
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
119 static void FormatResources(Json::Value& target,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
120 ResourceType level,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
121 const std::set<std::string>& resources)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
122 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
123 assert(target.type() == Json::arrayValue);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
124
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
125 for (std::set<std::string>::const_iterator
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
126 it = resources.begin(); it != resources.end(); ++it)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
127 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
128 Json::Value item = Json::objectValue;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
129 FormatResource(item, level, *it);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
130 target.append(item);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
131 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
132 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
133
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
134 std::set<std::string> instances_;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
135 std::set<std::string> series_;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
136 std::set<std::string> studies_;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
137 std::set<std::string> patients_;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
138
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
139 public:
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
140 virtual void Update(DicomInstanceHasher& hasher) ORTHANC_OVERRIDE
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
141 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
142 instances_.insert(hasher.HashInstance());
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
143 series_.insert(hasher.HashSeries());
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
144 studies_.insert(hasher.HashStudy());
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
145 patients_.insert(hasher.HashPatient());
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
146 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
147
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
148 virtual void Format(Json::Value& target) const ORTHANC_OVERRIDE
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
149 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
150 assert(target.type() == Json::objectValue);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
151 Json::Value resources = Json::arrayValue;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
152 FormatResources(resources, ResourceType_Instance, instances_);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
153 FormatResources(resources, ResourceType_Series, series_);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
154 FormatResources(resources, ResourceType_Study, studies_);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
155 FormatResources(resources, ResourceType_Patient, patients_);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
156 target["Resources"] = resources;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
157 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
158
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
159 virtual bool IsSingleResource() const ORTHANC_OVERRIDE
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
160 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
161 return false;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
162 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
163 };
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
164
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
165
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
166
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
167 bool ResourceModificationJob::HandleInstance(const std::string& instance)
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
168 {
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
169 if (modification_.get() == NULL ||
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
170 output_.get() == NULL)
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
171 {
2955
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2868
diff changeset
172 throw OrthancException(ErrorCode_BadSequenceOfCalls,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2868
diff changeset
173 "No modification was provided for this job");
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
174 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
175
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
176
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
177 LOG(INFO) << "Modifying instance in a job: " << instance;
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
178
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
179
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
180 /**
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
181 * Retrieve the original instance from the DICOM cache.
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
182 **/
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
183
3712
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
184 std::unique_ptr<DicomInstanceHasher> originalHasher;
2a170a8f1faf replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3640
diff changeset
185 std::unique_ptr<ParsedDicomFile> modified;
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
186
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
187 try
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
188 {
3942
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3938
diff changeset
189 ServerContext::DicomCacheLocker locker(GetContext(), instance);
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
190 ParsedDicomFile& original = locker.GetDicom();
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
191
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
192 originalHasher.reset(new DicomInstanceHasher(original.GetHasher()));
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
193 modified.reset(original.Clone(true));
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
194 }
3430
4c45e018bd3d improved logging
Alain Mazy <alain@mazy.be>
parents: 3095
diff changeset
195 catch (OrthancException& e)
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
196 {
3430
4c45e018bd3d improved logging
Alain Mazy <alain@mazy.be>
parents: 3095
diff changeset
197 LOG(WARNING) << "An error occurred while executing a Modification job on instance " << instance << ": " << e.GetDetails();
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
198 return false;
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
199 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
200
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
201
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
202 /**
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
203 * Compute the resulting DICOM instance.
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
204 **/
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
205
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
206 modification_->Apply(*modified);
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
207
3948
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
208 const std::string modifiedUid = IDicomTranscoder::GetSopInstanceUid(modified->GetDcmtkObject());
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
209
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
210 if (transcode_)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
211 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
212 std::set<DicomTransferSyntax> syntaxes;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
213 syntaxes.insert(transferSyntax_);
3945
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
214
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
215 IDicomTranscoder::DicomImage source;
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
216 source.AcquireParsed(*modified); // "modified" is invalid below this point
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
217
3945
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
218 IDicomTranscoder::DicomImage transcoded;
3951
5fe8c6d3212e removed useless information "hasSopInstanceUidChanged"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3948
diff changeset
219 if (GetContext().Transcode(transcoded, source, syntaxes, true))
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
220 {
3945
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
221 modified.reset(transcoded.ReleaseAsParsedDicomFile());
3948
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
222
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
223 // Fix the SOP instance UID in order the preserve the
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
224 // references between instance UIDs in the DICOM hierarchy
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
225 // (the UID might have changed in the case of lossy transcoding)
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
226 if (modified.get() == NULL ||
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
227 modified->GetDcmtkObject().getDataset() == NULL ||
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
228 !modified->GetDcmtkObject().getDataset()->putAndInsertString(
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
229 DCM_SOPInstanceUID, modifiedUid.c_str(), OFTrue /* replace */).good())
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
230 {
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
231 throw OrthancException(ErrorCode_InternalError);
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
232 }
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
233 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
234 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
235 {
3945
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
236 LOG(WARNING) << "Cannot transcode instance, keeping original transfer syntax: " << instance;
0b3256c3ee14 simplified IDicomTranscoder
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3943
diff changeset
237 modified.reset(source.ReleaseAsParsedDicomFile());
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
238 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
239 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
240
3948
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
241 assert(modifiedUid == IDicomTranscoder::GetSopInstanceUid(modified->GetDcmtkObject()));
3d2fc1b5cc8c ResourceModificationJob: Fix the SOP instance UID to preserve references
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3945
diff changeset
242
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
243 std::unique_ptr<DicomInstanceToStore> toStore(DicomInstanceToStore::CreateFromParsedDicomFile(*modified));
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
244 toStore->SetOrigin(origin_);
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
245
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
246
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
247 /**
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
248 * Prepare the metadata information to associate with the
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
249 * resulting DICOM instance (AnonymizedFrom/ModifiedFrom).
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
250 **/
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
251
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
252 DicomInstanceHasher modifiedHasher = modified->GetHasher();
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
253
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
254 MetadataType metadataType = (isAnonymization_ ?
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
255 MetadataType_AnonymizedFrom :
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
256 MetadataType_ModifiedFrom);
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
257
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
258 if (originalHasher->HashSeries() != modifiedHasher.HashSeries())
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
259 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
260 toStore->AddMetadata(ResourceType_Series, metadataType, originalHasher->HashSeries());
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
261 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
262
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
263 if (originalHasher->HashStudy() != modifiedHasher.HashStudy())
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
264 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
265 toStore->AddMetadata(ResourceType_Study, metadataType, originalHasher->HashStudy());
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
266 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
267
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
268 if (originalHasher->HashPatient() != modifiedHasher.HashPatient())
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
269 {
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
270 toStore->AddMetadata(ResourceType_Patient, metadataType, originalHasher->HashPatient());
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
271 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
272
2825
8aa6aef11b70 New configuration option "OverwriteInstances" to choose how duplicate SOPInstanceUID are handled
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2664
diff changeset
273 assert(instance == originalHasher->HashInstance());
4508
8f9090b137f1 Optimization in C-STORE SCP by avoiding an unnecessary DICOM parsing
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4437
diff changeset
274 toStore->AddMetadata(ResourceType_Instance, metadataType, instance);
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
275
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
276
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
277 /**
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
278 * Store the resulting DICOM instance into the Orthanc store.
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
279 **/
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
280
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
281 std::string modifiedInstance;
4796
94616af363ec added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents: 4693
diff changeset
282 ServerContext::StoreResult result = GetContext().Store(modifiedInstance, *toStore, StoreInstanceMode_Default);
94616af363ec added ReceivedCStoreInstanceFilter lua callback + OrthancPluginRegisterIncomingCStoreInstanceFilter in sdk
Alain Mazy <am@osimis.io>
parents: 4693
diff changeset
283 if (result.GetStatus() != StoreStatus_Success)
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
284 {
2955
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2868
diff changeset
285 throw OrthancException(ErrorCode_CannotStoreInstance,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2868
diff changeset
286 "Error while storing a modified instance " + instance);
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
287 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
288
3938
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
289 /**
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
290 * The assertion below will fail if automated transcoding to a
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
291 * lossy transfer syntax is enabled in the Orthanc core, and if
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
292 * the source instance is not in this transfer syntax.
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
293 **/
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3814
diff changeset
294 // assert(modifiedInstance == modifiedHasher.HashInstance());
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
295
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
296 output_->Update(modifiedHasher);
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
297
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
298 return true;
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
299 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
300
2842
ff0ed5ea9e4e trailing step in SetOfInstancesJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2825
diff changeset
301
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
302 ResourceModificationJob::ResourceModificationJob(ServerContext& context) :
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
303 CleaningInstancesJob(context, true /* by default, keep source */),
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
304 isAnonymization_(false),
4206
171af1567473 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4205
diff changeset
305 transcode_(false),
171af1567473 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4205
diff changeset
306 transferSyntax_(DicomTransferSyntax_LittleEndianExplicit) // dummy initialization
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
307 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
308 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
309
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
310
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
311 void ResourceModificationJob::SetSingleResourceModification(DicomModification* modification,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
312 ResourceType outputLevel,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
313 bool isAnonymization)
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
314 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
315 if (modification == NULL)
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
316 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
317 throw OrthancException(ErrorCode_NullPointer);
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
318 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
319 else if (IsStarted())
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
320 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
321 throw OrthancException(ErrorCode_BadSequenceOfCalls);
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
322 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
323 else
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
324 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
325 modification_.reset(modification);
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
326 output_.reset(new SingleOutput(outputLevel));
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
327 isAnonymization_ = isAnonymization;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
328 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
329 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
330
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
331
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
332 void ResourceModificationJob::SetMultipleResourcesModification(DicomModification* modification,
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
333 bool isAnonymization)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
334 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
335 if (modification == NULL)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
336 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
337 throw OrthancException(ErrorCode_NullPointer);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
338 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
339 else if (IsStarted())
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
340 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
341 throw OrthancException(ErrorCode_BadSequenceOfCalls);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
342 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
343 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
344 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
345 modification_.reset(modification);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
346 output_.reset(new MultipleOutputs);
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
347 isAnonymization_ = isAnonymization;
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
348 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
349 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
350
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
351
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
352 void ResourceModificationJob::SetOrigin(const DicomInstanceOrigin& origin)
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
353 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
354 if (IsStarted())
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
355 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
356 throw OrthancException(ErrorCode_BadSequenceOfCalls);
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
357 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
358 else
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
359 {
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
360 origin_ = origin;
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
361 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
362 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
363
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
364
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
365 void ResourceModificationJob::SetOrigin(const RestApiCall& call)
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
366 {
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
367 SetOrigin(DicomInstanceOrigin::FromRest(call));
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
368 }
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
369
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
370
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
371 const DicomModification& ResourceModificationJob::GetModification() const
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
372 {
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
373 if (modification_.get() == NULL)
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
374 {
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
375 throw OrthancException(ErrorCode_BadSequenceOfCalls);
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
376 }
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
377 else
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
378 {
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
379 return *modification_;
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
380 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
381 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
382
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
383
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
384 DicomTransferSyntax ResourceModificationJob::GetTransferSyntax() const
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
385 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
386 if (transcode_)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
387 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
388 return transferSyntax_;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
389 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
390 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
391 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
392 throw OrthancException(ErrorCode_BadSequenceOfCalls);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
393 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
394 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
395
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
396
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
397 void ResourceModificationJob::SetTranscode(DicomTransferSyntax syntax)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
398 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
399 if (IsStarted())
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
400 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
401 throw OrthancException(ErrorCode_BadSequenceOfCalls);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
402 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
403 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
404 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
405 transcode_ = true;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
406 transferSyntax_ = syntax;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
407 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
408 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
409
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
410
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
411 void ResourceModificationJob::SetTranscode(const std::string& transferSyntaxUid)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
412 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
413 DicomTransferSyntax s;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
414 if (LookupTransferSyntax(s, transferSyntaxUid))
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
415 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
416 SetTranscode(s);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
417 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
418 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
419 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
420 throw OrthancException(ErrorCode_BadFileFormat,
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
421 "Unknown transfer syntax UID: " + transferSyntaxUid);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
422 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
423 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
424
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
425
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
426 void ResourceModificationJob::ClearTranscode()
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
427 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
428 if (IsStarted())
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
429 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
430 throw OrthancException(ErrorCode_BadSequenceOfCalls);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
431 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
432 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
433 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
434 transcode_ = false;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
435 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
436 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
437
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
438
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
439 bool ResourceModificationJob::IsSingleResourceModification() const
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
440 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
441 if (modification_.get() == NULL)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
442 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
443 assert(output_.get() == NULL);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
444 throw OrthancException(ErrorCode_BadSequenceOfCalls);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
445 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
446 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
447 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
448 assert(output_.get() != NULL);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
449 return output_->IsSingleResource();
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
450 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
451 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
452
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
453
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
454 ResourceType ResourceModificationJob::GetOutputLevel() const
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
455 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
456 if (IsSingleResourceModification())
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
457 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
458 assert(modification_.get() != NULL &&
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
459 output_.get() != NULL);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
460 return dynamic_cast<const SingleOutput&>(*output_).GetLevel();
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
461 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
462 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
463 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
464 // Not applicable if multiple resources
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
465 throw OrthancException(ErrorCode_BadSequenceOfCalls);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
466 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
467 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
468
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
469
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
470 void ResourceModificationJob::GetPublicContent(Json::Value& value)
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
471 {
3942
5b882ad2ffd0 "/{patients|studies|series}/.../modify": New option "KeepSource"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3938
diff changeset
472 CleaningInstancesJob::GetPublicContent(value);
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
473
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
474 value["IsAnonymization"] = isAnonymization_;
2868
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
475
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
476 if (output_.get() != NULL)
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
477 {
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
478 output_->Format(value);
abce036683cd sharing code within OrthancRestAnonymizeModify
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2842
diff changeset
479 }
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
480
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
481 if (transcode_)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
482 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
483 value["Transcode"] = GetTransferSyntaxUid(transferSyntax_);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
484 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
485 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
486
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
487
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
488 static const char* MODIFICATION = "Modification";
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
489 static const char* ORIGIN = "Origin";
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
490 static const char* IS_ANONYMIZATION = "IsAnonymization";
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
491 static const char* TRANSCODE = "Transcode";
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
492 static const char* OUTPUT_LEVEL = "OutputLevel";
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
493 static const char* IS_SINGLE_RESOURCE = "IsSingleResource";
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
494
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
495
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
496 ResourceModificationJob::ResourceModificationJob(ServerContext& context,
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
497 const Json::Value& serialized) :
4223
3d6f14a05db1 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4206
diff changeset
498 CleaningInstancesJob(context, serialized, true /* by default, keep source */),
3d6f14a05db1 cppcheck
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4206
diff changeset
499 transferSyntax_(DicomTransferSyntax_LittleEndianExplicit) // dummy initialization
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
500 {
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
501 assert(serialized.type() == Json::objectValue);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
502
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
503 origin_ = DicomInstanceOrigin(serialized[ORIGIN]);
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
504
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
505 if (serialized.isMember(TRANSCODE))
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
506 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
507 SetTranscode(SerializationToolbox::ReadString(serialized, TRANSCODE));
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
508 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
509 else
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
510 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
511 transcode_ = false;
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
512 }
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
513
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
514 bool isSingleResource;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
515 if (serialized.isMember(IS_SINGLE_RESOURCE))
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
516 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
517 isSingleResource = SerializationToolbox::ReadBoolean(serialized, IS_SINGLE_RESOURCE);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
518 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
519 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
520 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
521 isSingleResource = true; // Backward compatibility with Orthanc <= 1.9.3
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
522 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
523
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
524 bool isAnonymization = SerializationToolbox::ReadBoolean(serialized, IS_ANONYMIZATION);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
525 std::unique_ptr<DicomModification> modification(new DicomModification(serialized[MODIFICATION]));
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
526
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
527 if (isSingleResource)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
528 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
529 ResourceType outputLevel;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
530
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
531 if (serialized.isMember(OUTPUT_LEVEL))
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
532 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
533 // New in Orthanc 1.9.4. This fixes an *incorrect* behavior in
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
534 // Orthanc <= 1.9.3, in which "outputLevel" would be set to
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
535 // "modification->GetLevel()"
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
536 outputLevel = StringToResourceType(SerializationToolbox::ReadString(serialized, OUTPUT_LEVEL).c_str());
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
537 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
538 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
539 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
540 // Use the buggy convention from Orthanc <= 1.9.3 (which is
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
541 // the only thing we have at hand)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
542 outputLevel = modification->GetLevel();
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
543
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
544 if (outputLevel == ResourceType_Instance)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
545 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
546 // This should never happen, but as "SingleOutput" doesn't
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
547 // support instance-level anonymization, don't take any risk
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
548 // and choose an arbitrary output level
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
549 outputLevel = ResourceType_Patient;
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
550 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
551 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
552
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
553 SetSingleResourceModification(modification.release(), outputLevel, isAnonymization);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
554 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
555 else
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
556 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
557 // New in Orthanc 1.9.4
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
558 SetMultipleResourcesModification(modification.release(), isAnonymization);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
559 }
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
560 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
561
2663
228e2783ce83 some jobs might not be serializable
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2648
diff changeset
562 bool ResourceModificationJob::Serialize(Json::Value& value)
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
563 {
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
564 if (modification_.get() == NULL)
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
565 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
566 throw OrthancException(ErrorCode_BadSequenceOfCalls);
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
567 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
568 else if (!CleaningInstancesJob::Serialize(value))
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
569 {
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
570 return false;
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
571 }
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
572 else
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
573 {
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
574 assert(value.type() == Json::objectValue);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
575
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
576 value[IS_ANONYMIZATION] = isAnonymization_;
3943
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
577
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
578 if (transcode_)
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
579 {
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
580 value[TRANSCODE] = GetTransferSyntaxUid(transferSyntax_);
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
581 }
b26d25d3c1c7 "/{patients|studies|series}/.../modify": New option "Transcode"
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 3942
diff changeset
582
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
583 origin_.Serialize(value[ORIGIN]);
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
584
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
585 Json::Value tmp;
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
586 modification_->Serialize(tmp);
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
587 value[MODIFICATION] = tmp;
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
588
4693
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
589 // New in Orthanc 1.9.4
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
590 value[IS_SINGLE_RESOURCE] = IsSingleResourceModification();
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
591 if (IsSingleResourceModification())
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
592 {
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
593 value[OUTPUT_LEVEL] = EnumerationToString(GetOutputLevel());
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
594 }
45bce660ce3a added routes for bulk anonymization/modification
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 4508
diff changeset
595
2664
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
596 return true;
a21b244efb37 serialization of DicomModalityStoreJob, OrthancPeerStoreJob and ResourceModificationJob
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 2663
diff changeset
597 }
2642
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
598 }
ccc470091ea6 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
599 }