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added test_dicom_seg
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 25 Nov 2021 15:26:37 +0100
parents 62ee5e57ee05
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1 =========================
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2 Source of the test images
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3 =========================
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5 ------
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6 OsiriX
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7 ------
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9 Many of the images that are used by the integration tests of Orthanc
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10 come from the OsiriX samples available at:
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11 http://www.osirix-viewer.com/datasets/
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13 WARNING: The datasets from OsiriX are exclusively available for
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14 research and teaching! You are not authorized to redistribute or sell
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15 them, or use them for commercial purposes.
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17
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18 ----
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19 GDCM
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20 ----
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21
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22 Some images were collected by the GDCM project. They can be downloaded
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23 courtesy of Jean-Pierre Roux at the following URL:
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24 http://www.creatis.insa-lyon.fr/~jpr/PUBLIC/gdcm/gdcmSampleData
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27 ---------------
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28 Sébastien Barré
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29 ---------------
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30
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31 Some images are provided courtesy of Sébastien Barré:
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32 http://www.barre.nom.fr/medical/samples/
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33
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34
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35 ---------------------------
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36 NEMA - DICOM working groups
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37 ---------------------------
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38
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39 Some images come from the sample images of DICOM WG04:
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40 ftp://medical.nema.org/medical/Dicom/DataSets/WG04/
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41
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42
436
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43 ---------------------------------
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44 The Cancer Imaging Archive (TCIA)
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45 ---------------------------------
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46
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47 Some images come from the "TCGA-GBM" data collection:
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48 https://wiki.cancerimagingarchive.net/display/Public/TCGA-GBM
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49
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50 Scarpace, L., Mikkelsen, T., Cha, S., Rao, S., Tekchandani, S.,
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51 Gutman, D., Saltz, J. H., Erickson, B. J., Pedano, N., Flanders,
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52 A. E., Barnholtz-Sloan, J., Ostrom, Q., Barboriak, D., & Pierce,
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53 L. J. (2016). Radiology Data from The Cancer Genome Atlas Glioblastoma
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54 Multiforme [TCGA-GBM] collection [Data set]. The Cancer Imaging
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55 Archive. https://doi.org/10.7937/K9/TCIA.2016.RNYFUYE9
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58 -------------
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59 Other sources
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60 -------------
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61
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62 Other images were publicly posted by external contributors to the
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63 Orthanc project, or were generated manually by the Orthanc team.
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64
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65
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66 -------
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67 Content
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68 -------
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69
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70 Here is the source of each set of sample images:
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333
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72 - 2020-09-12-ELSCINT1-PMSCT_RLE1.dcm: Anonymized from https://discourse.slicer.org/t/fail-to-load-pet-ct-gemini/8158
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73 - 2020-11-16-SalimKanounAnonymization.dcm: From https://groups.google.com/g/orthanc-users/c/T0IokiActrI/m/L9K0vfscAAAJ
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74 - Beaufix/* : From OsiriX, "BEAUFIX" (sample of JPEG2000).
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75 - Brainix/* : From OsiriX, "BRAINIX" (sample of uncompressed data).
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76 - ColorTestImageJ.dcm : From ImageJ, http://imagej.nih.gov/ij/images/cardio.dcm
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77 - ColorTestMalaterre.dcm : From Mathieu Malaterre <mathieu.malaterre@gmail.com>, Debian bug #698417
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78 - Comunix/* : From OsiriX, "COMUNIX" (sample of PET/CT study).
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79 - DicomSeg.dcm : From TCIA, "TCGA-GBM" collection, "TCGA-08-0360" patient.
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80 - DummyCT.dcm : From Osirix, "KNIX" with PixelData removed.
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81 - HierarchicalAnonymization/RTH/* : From https://wiki.cancerimagingarchive.net/display/Public/Lung+CT+Segmentation+Challenge+2017
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82 - HierarchicalAnonymization/StructuredReports/* : Courtesy of Collective Minds Radiology AB
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83 - Issue16.dcm : From Chris Hafey on Google Code (AT VR's are not returned properly as JSON)
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84 - Issue19.dcm : From Chris Hafey on Google Code (YBR_FULL are not decoded incorrectly)
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85 - Issue22.dcm : From Emsy Chan on Google Code (Error decoding multi-frame instances)
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86 - Issue32.dcm : From aceberg93 on Google Code (Cyrillic symbols)
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87 - KarstenHilbertRF.dcm : From Karsten Hilbert <karsten.hilbert@gmx.net>.
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88 - Knee/* : From OsiriX, "KNEE" (sample of JPEG2000).
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89 - Knix/* : From OsiriX, "KNIX" (sample of lossless JPEG).
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90 - Lena.png : Lena/Lenna test image (as downloaded from Wikipedia). MD5 = 814a0034f5549e957ee61360d87457e5
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91 - LenaTwiceWithFragments.dcm: One image with 2 JPEG frames containing Lena (from Orthanc)
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92 - MarekLatin2.dcm : From Marek Święcicki <mswiecicki@archimedic.pl>.
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93 - Multiframe.dcm : From GDCM, "images_of_interest/PHILIPS_Integris_H-8-MONO2-Multiframe.dcm"
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94 - Phenix/* : From OsiriX, "PHENIX" (sample of uncompressed data).
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95 - PilatesArgenturGEUltrasoundOsiriX.dcm: From https://groups.google.com/d/msg/orthanc-users/m3zQLyl_jNc/TUrR462UKSMJ
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96 - PrivateMDNTags.dcm : From University Hospital of Liege
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97 - PrivateTags.dcm : From GDCM, "images_of_interest/494APG9K.dcm"
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98 - SignedCT.dcm : From Sébastien Jodogne.
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99 - TransferSyntaxes/1.2.840.10008.1.2.1.dcm : From Sébastien Barré (US-RGB-8-esopecho)
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100 - TransferSyntaxes/1.2.840.10008.1.2.2.dcm : From Sébastien Barré (US-RGB-8-epicard)
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101 - TransferSyntaxes/1.2.840.10008.1.2.4.50.dcm : From GDCM, "US_DataSet/Philips_US/3EAF5680_8b_YBR_jpeg.dcm"
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102 - TransferSyntaxes/1.2.840.10008.1.2.4.51.dcm : From DICOM WG04 (IMAGES/JPLY/MG1_JPLY)
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103 - TransferSyntaxes/1.2.840.10008.1.2.4.57.dcm : From Sébastien Barré (MR-MONO2-12-shoulder)
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104 - TransferSyntaxes/1.2.840.10008.1.2.4.70.dcm : From Sébastien Barré (CT-MONO2-16-chest)
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105 - TransferSyntaxes/1.2.840.10008.1.2.4.80.dcm : From DICOM WG04 (IMAGES/JLSL/NM1_JLSL)
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106 - TransferSyntaxes/1.2.840.10008.1.2.4.81.dcm : From DICOM WG04 (IMAGES/JLSN/CT2_JLSN)
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107 - TransferSyntaxes/1.2.840.10008.1.2.4.90.dcm : From DICOM WG04 (IMAGES/J2KR/NM1_J2KR)
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108 - TransferSyntaxes/1.2.840.10008.1.2.4.91.dcm : From DICOM WG04 (IMAGES/J2KI/CT1_J2KI)
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109 - TransferSyntaxes/1.2.840.10008.1.2.5.dcm : From DICOM WG04 (IMAGES/RLE/NM1_RLE)
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110 - TransferSyntaxes/1.2.840.10008.1.2.dcm : From Sébastien Barré (MR-MONO2-12-an2)
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111 - UnknownSopClassUid.dcm : Same as "ColorTestMalaterre.dcm", with arbitrary SOP class UID.
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112
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113 Sample images that are not listed above, were submitted by Orthanc
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114 users, either in the "Orthanc Users" public discussion group or in the
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115 Orthanc bug tracker.