Mercurial > hg > orthanc-stone
changeset 200:03afbee0cc7b
integration of Orthanc core into Stone
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--- a/Resources/CMake/OrthancStoneParameters.cmake Thu Mar 22 12:53:47 2018 +0100 +++ b/Resources/CMake/OrthancStoneParameters.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -22,22 +22,20 @@ ## Import the parameters of the Orthanc Framework ##################################################################### -# TODO => Import -SET(ORTHANC_ROOT /home/jodogne/Subversion/orthanc) +set(ORTHANC_STONE_ROOT ${CMAKE_CURRENT_LIST_DIR}/../..) +set(ORTHANC_ROOT ${ORTHANC_STONE_ROOT}/Resources/Orthanc) include(${ORTHANC_ROOT}/Resources/CMake/OrthancFrameworkParameters.cmake) -SET(ORTHANC_STONE_ROOT ${CMAKE_CURRENT_LIST_DIR}/../..) - ##################################################################### ## CMake parameters tunable by the user ##################################################################### # Advanced parameters to fine-tune linking against system libraries -SET(USE_SYSTEM_CAIRO ON CACHE BOOL "Use the system version of Cairo") -SET(USE_SYSTEM_PIXMAN ON CACHE BOOL "Use the system version of Pixman") -SET(USE_SYSTEM_SDL ON CACHE BOOL "Use the system version of SDL2") +set(USE_SYSTEM_CAIRO ON CACHE BOOL "Use the system version of Cairo") +set(USE_SYSTEM_PIXMAN ON CACHE BOOL "Use the system version of Pixman") +set(USE_SYSTEM_SDL ON CACHE BOOL "Use the system version of SDL2") ##################################################################### @@ -45,4 +43,4 @@ ## the Stone of Orthanc ##################################################################### -SET(ENABLE_SDL ON CACHE INTERNAL "Include support for SDL") +set(ENABLE_SDL ON CACHE INTERNAL "Include support for SDL")
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Cache/ICachePageProvider.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,50 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <string> +#include "../IDynamicObject.h" + +namespace Orthanc +{ + class ICachePageProvider + { + public: + virtual ~ICachePageProvider() + { + } + + virtual IDynamicObject* Provide(const std::string& id) = 0; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Cache/LeastRecentlyUsedIndex.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,347 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <list> +#include <map> +#include <boost/noncopyable.hpp> +#include <cassert> + +#include "../OrthancException.h" +#include "../Toolbox.h" + +namespace Orthanc +{ + /** + * This class implements the index of a cache with least recently + * used (LRU) recycling policy. All the items of the cache index + * can be associated with a payload. + * Reference: http://stackoverflow.com/a/2504317 + **/ + template <typename T, typename Payload = NullType> + class LeastRecentlyUsedIndex : public boost::noncopyable + { + private: + typedef std::list< std::pair<T, Payload> > Queue; + typedef std::map<T, typename Queue::iterator> Index; + + Index index_; + Queue queue_; + + /** + * Internal method for debug builds to check whether the internal + * data structures are not corrupted. + **/ + void CheckInvariants() const; + + public: + /** + * Add a new element to the cache index, and make it the most + * recent element. + * \param id The ID of the element. + * \param payload The payload of the element. + **/ + void Add(T id, Payload payload = Payload()); + + void AddOrMakeMostRecent(T id, Payload payload = Payload()); + + /** + * When accessing an element of the cache, this method tags the + * element as the most recently used. + * \param id The most recently accessed item. + **/ + void MakeMostRecent(T id); + + void MakeMostRecent(T id, Payload updatedPayload); + + /** + * Remove an element from the cache index. + * \param id The item to remove. + **/ + Payload Invalidate(T id); + + /** + * Get the oldest element in the cache and remove it. + * \return The oldest item. + **/ + T RemoveOldest(); + + /** + * Get the oldest element in the cache, remove it and return the + * associated payload. + * \param payload Where to store the associated payload. + * \return The oldest item. + **/ + T RemoveOldest(Payload& payload); + + /** + * Check whether an element is contained in the cache. + * \param id The item. + * \return \c true iff the item is indexed by the cache. + **/ + bool Contains(T id) const + { + return index_.find(id) != index_.end(); + } + + bool Contains(T id, Payload& payload) const + { + typename Index::const_iterator it = index_.find(id); + if (it == index_.end()) + { + return false; + } + else + { + payload = it->second->second; + return true; + } + } + + /** + * Return the number of elements in the cache. + * \return The number of elements. + **/ + size_t GetSize() const + { + assert(index_.size() == queue_.size()); + return queue_.size(); + } + + /** + * Check whether the cache index is empty. + * \return \c true iff the cache is empty. + **/ + bool IsEmpty() const + { + return index_.empty(); + } + + const T& GetOldest() const; + + const Payload& GetOldestPayload() const; + }; + + + + + /****************************************************************** + ** Implementation of the template + ******************************************************************/ + + template <typename T, typename Payload> + void LeastRecentlyUsedIndex<T, Payload>::CheckInvariants() const + { +#ifndef NDEBUG + assert(index_.size() == queue_.size()); + + for (typename Index::const_iterator + it = index_.begin(); it != index_.end(); it++) + { + assert(it->second != queue_.end()); + assert(it->second->first == it->first); + } +#endif + } + + + template <typename T, typename Payload> + void LeastRecentlyUsedIndex<T, Payload>::Add(T id, Payload payload) + { + if (Contains(id)) + { + throw OrthancException(ErrorCode_BadSequenceOfCalls); + } + + queue_.push_front(std::make_pair(id, payload)); + index_[id] = queue_.begin(); + + CheckInvariants(); + } + + + template <typename T, typename Payload> + void LeastRecentlyUsedIndex<T, Payload>::MakeMostRecent(T id) + { + if (!Contains(id)) + { + throw OrthancException(ErrorCode_InexistentItem); + } + + typename Index::iterator it = index_.find(id); + assert(it != index_.end()); + + std::pair<T, Payload> item = *(it->second); + + queue_.erase(it->second); + queue_.push_front(item); + index_[id] = queue_.begin(); + + CheckInvariants(); + } + + + template <typename T, typename Payload> + void LeastRecentlyUsedIndex<T, Payload>::AddOrMakeMostRecent(T id, Payload payload) + { + typename Index::iterator it = index_.find(id); + + if (it != index_.end()) + { + // Already existing. Make it most recent. + std::pair<T, Payload> item = *(it->second); + item.second = payload; + queue_.erase(it->second); + queue_.push_front(item); + } + else + { + // New item + queue_.push_front(std::make_pair(id, payload)); + } + + index_[id] = queue_.begin(); + + CheckInvariants(); + } + + + template <typename T, typename Payload> + void LeastRecentlyUsedIndex<T, Payload>::MakeMostRecent(T id, Payload updatedPayload) + { + if (!Contains(id)) + { + throw OrthancException(ErrorCode_InexistentItem); + } + + typename Index::iterator it = index_.find(id); + assert(it != index_.end()); + + std::pair<T, Payload> item = *(it->second); + item.second = updatedPayload; + + queue_.erase(it->second); + queue_.push_front(item); + index_[id] = queue_.begin(); + + CheckInvariants(); + } + + + template <typename T, typename Payload> + Payload LeastRecentlyUsedIndex<T, Payload>::Invalidate(T id) + { + if (!Contains(id)) + { + throw OrthancException(ErrorCode_InexistentItem); + } + + typename Index::iterator it = index_.find(id); + assert(it != index_.end()); + + Payload payload = it->second->second; + queue_.erase(it->second); + index_.erase(it); + + CheckInvariants(); + return payload; + } + + + template <typename T, typename Payload> + T LeastRecentlyUsedIndex<T, Payload>::RemoveOldest(Payload& payload) + { + if (IsEmpty()) + { + throw OrthancException(ErrorCode_BadSequenceOfCalls); + } + + std::pair<T, Payload> item = queue_.back(); + T oldest = item.first; + payload = item.second; + + queue_.pop_back(); + assert(index_.find(oldest) != index_.end()); + index_.erase(oldest); + + CheckInvariants(); + + return oldest; + } + + + template <typename T, typename Payload> + T LeastRecentlyUsedIndex<T, Payload>::RemoveOldest() + { + if (IsEmpty()) + { + throw OrthancException(ErrorCode_BadSequenceOfCalls); + } + + std::pair<T, Payload> item = queue_.back(); + T oldest = item.first; + + queue_.pop_back(); + assert(index_.find(oldest) != index_.end()); + index_.erase(oldest); + + CheckInvariants(); + + return oldest; + } + + + template <typename T, typename Payload> + const T& LeastRecentlyUsedIndex<T, Payload>::GetOldest() const + { + if (IsEmpty()) + { + throw OrthancException(ErrorCode_BadSequenceOfCalls); + } + + return queue_.back().first; + } + + + template <typename T, typename Payload> + const Payload& LeastRecentlyUsedIndex<T, Payload>::GetOldestPayload() const + { + if (IsEmpty()) + { + throw OrthancException(ErrorCode_BadSequenceOfCalls); + } + + return queue_.back().second; + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Cache/MemoryCache.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,96 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "MemoryCache.h" + +#include "../Logging.h" + +namespace Orthanc +{ + MemoryCache::Page& MemoryCache::Load(const std::string& id) + { + // Reuse the cache entry if it already exists + Page* p = NULL; + if (index_.Contains(id, p)) + { + VLOG(1) << "Reusing a cache page"; + assert(p != NULL); + index_.MakeMostRecent(id); + return *p; + } + + // The id is not in the cache yet. Make some room if the cache + // is full. + if (index_.GetSize() == cacheSize_) + { + VLOG(1) << "Dropping the oldest cache page"; + index_.RemoveOldest(p); + delete p; + } + + // Create a new cache page + std::auto_ptr<Page> result(new Page); + result->id_ = id; + result->content_.reset(provider_.Provide(id)); + + // Add the newly create page to the cache + VLOG(1) << "Registering new data in a cache page"; + p = result.release(); + index_.Add(id, p); + return *p; + } + + MemoryCache::MemoryCache(ICachePageProvider& provider, + size_t cacheSize) : + provider_(provider), + cacheSize_(cacheSize) + { + } + + MemoryCache::~MemoryCache() + { + while (!index_.IsEmpty()) + { + Page* element = NULL; + index_.RemoveOldest(element); + assert(element != NULL); + delete element; + } + } + + IDynamicObject& MemoryCache::Access(const std::string& id) + { + return *Load(id).content_; + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Cache/MemoryCache.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,68 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <memory> +#include "LeastRecentlyUsedIndex.h" +#include "ICachePageProvider.h" + +namespace Orthanc +{ + /** + * WARNING: This class is NOT thread-safe. + **/ + class MemoryCache + { + private: + struct Page + { + std::string id_; + std::auto_ptr<IDynamicObject> content_; + }; + + ICachePageProvider& provider_; + size_t cacheSize_; + LeastRecentlyUsedIndex<std::string, Page*> index_; + + Page& Load(const std::string& id); + + public: + MemoryCache(ICachePageProvider& provider, + size_t cacheSize); + + ~MemoryCache(); + + IDynamicObject& Access(const std::string& id); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Cache/SharedArchive.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,134 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "SharedArchive.h" + +#include "../SystemToolbox.h" + + +namespace Orthanc +{ + void SharedArchive::RemoveInternal(const std::string& id) + { + Archive::iterator it = archive_.find(id); + + if (it != archive_.end()) + { + delete it->second; + archive_.erase(it); + } + } + + + SharedArchive::Accessor::Accessor(SharedArchive& that, + const std::string& id) : + lock_(that.mutex_) + { + Archive::iterator it = that.archive_.find(id); + + if (it == that.archive_.end()) + { + throw OrthancException(ErrorCode_InexistentItem); + } + else + { + that.lru_.MakeMostRecent(id); + item_ = it->second; + } + } + + + SharedArchive::SharedArchive(size_t maxSize) : + maxSize_(maxSize) + { + if (maxSize == 0) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + SharedArchive::~SharedArchive() + { + for (Archive::iterator it = archive_.begin(); + it != archive_.end(); ++it) + { + delete it->second; + } + } + + + std::string SharedArchive::Add(IDynamicObject* obj) + { + boost::mutex::scoped_lock lock(mutex_); + + if (archive_.size() == maxSize_) + { + // The quota has been reached, remove the oldest element + std::string oldest = lru_.RemoveOldest(); + RemoveInternal(oldest); + } + + std::string id = SystemToolbox::GenerateUuid(); + RemoveInternal(id); // Should never be useful because of UUID + archive_[id] = obj; + lru_.Add(id); + + return id; + } + + + void SharedArchive::Remove(const std::string& id) + { + boost::mutex::scoped_lock lock(mutex_); + RemoveInternal(id); + lru_.Invalidate(id); + } + + + void SharedArchive::List(std::list<std::string>& items) + { + items.clear(); + + boost::mutex::scoped_lock lock(mutex_); + + for (Archive::const_iterator it = archive_.begin(); + it != archive_.end(); ++it) + { + items.push_back(it->first); + } + } +} + +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Cache/SharedArchive.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,94 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(ORTHANC_SANDBOXED) +# error The macro ORTHANC_SANDBOXED must be defined +#endif + +#if ORTHANC_SANDBOXED == 1 +# error The class SharedArchive cannot be used in sandboxed environments +#endif + +#include "LeastRecentlyUsedIndex.h" +#include "../IDynamicObject.h" + +#include <map> +#include <boost/thread.hpp> + +namespace Orthanc +{ + class SharedArchive : public boost::noncopyable + { + private: + typedef std::map<std::string, IDynamicObject*> Archive; + + size_t maxSize_; + boost::mutex mutex_; + Archive archive_; + Orthanc::LeastRecentlyUsedIndex<std::string> lru_; + + void RemoveInternal(const std::string& id); + + public: + class Accessor : public boost::noncopyable + { + private: + boost::mutex::scoped_lock lock_; + IDynamicObject* item_; + + public: + Accessor(SharedArchive& that, + const std::string& id); + + IDynamicObject& GetItem() const + { + return *item_; + } + }; + + + SharedArchive(size_t maxSize); + + ~SharedArchive(); + + std::string Add(IDynamicObject* obj); // Takes the ownership + + void Remove(const std::string& id); + + void List(std::list<std::string>& items); + }; +} + +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/ChunkedBuffer.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,103 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "PrecompiledHeaders.h" +#include "ChunkedBuffer.h" + +#include <cassert> +#include <string.h> + + +namespace Orthanc +{ + void ChunkedBuffer::Clear() + { + numBytes_ = 0; + + for (Chunks::iterator it = chunks_.begin(); + it != chunks_.end(); ++it) + { + delete *it; + } + } + + + void ChunkedBuffer::AddChunk(const void* chunkData, + size_t chunkSize) + { + if (chunkSize == 0) + { + return; + } + else + { + assert(chunkData != NULL); + chunks_.push_back(new std::string(reinterpret_cast<const char*>(chunkData), chunkSize)); + numBytes_ += chunkSize; + } + } + + + void ChunkedBuffer::AddChunk(const std::string& chunk) + { + if (chunk.size() > 0) + { + AddChunk(&chunk[0], chunk.size()); + } + } + + + void ChunkedBuffer::Flatten(std::string& result) + { + result.resize(numBytes_); + + size_t pos = 0; + for (Chunks::iterator it = chunks_.begin(); + it != chunks_.end(); ++it) + { + assert(*it != NULL); + + size_t s = (*it)->size(); + if (s != 0) + { + memcpy(&result[pos], (*it)->c_str(), s); + pos += s; + } + + delete *it; + } + + chunks_.clear(); + numBytes_ = 0; + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/ChunkedBuffer.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,72 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <list> +#include <string> + +namespace Orthanc +{ + class ChunkedBuffer + { + private: + typedef std::list<std::string*> Chunks; + size_t numBytes_; + Chunks chunks_; + + void Clear(); + + public: + ChunkedBuffer() : numBytes_(0) + { + } + + ~ChunkedBuffer() + { + Clear(); + } + + size_t GetNumBytes() const + { + return numBytes_; + } + + void AddChunk(const void* chunkData, + size_t chunkSize); + + void AddChunk(const std::string& chunk); + + void Flatten(std::string& result); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Compression/DeflateBaseCompressor.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,76 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "DeflateBaseCompressor.h" + +#include "../OrthancException.h" +#include "../Logging.h" + +#include <string.h> + +namespace Orthanc +{ + void DeflateBaseCompressor::SetCompressionLevel(uint8_t level) + { + if (level >= 10) + { + LOG(ERROR) << "Zlib compression level must be between 0 (no compression) and 9 (highest compression)"; + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + compressionLevel_ = level; + } + + + uint64_t DeflateBaseCompressor::ReadUncompressedSizePrefix(const void* compressed, + size_t compressedSize) + { + if (compressedSize == 0) + { + return 0; + } + + if (compressedSize < sizeof(uint64_t)) + { + LOG(ERROR) << "The compressed buffer is ill-formed"; + throw OrthancException(ErrorCode_CorruptedFile); + } + + uint64_t size; + memcpy(&size, compressed, sizeof(uint64_t)); + + return size; + } + +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Compression/DeflateBaseCompressor.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,76 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "IBufferCompressor.h" + +#include <stdint.h> + +namespace Orthanc +{ + class DeflateBaseCompressor : public IBufferCompressor + { + private: + uint8_t compressionLevel_; + bool prefixWithUncompressedSize_; + + protected: + uint64_t ReadUncompressedSizePrefix(const void* compressed, + size_t compressedSize); + + public: + DeflateBaseCompressor() : + compressionLevel_(6), + prefixWithUncompressedSize_(false) + { + } + + void SetCompressionLevel(uint8_t level); + + void SetPrefixWithUncompressedSize(bool prefix) + { + prefixWithUncompressedSize_ = prefix; + } + + bool HasPrefixWithUncompressedSize() const + { + return prefixWithUncompressedSize_; + } + + uint8_t GetCompressionLevel() const + { + return compressionLevel_; + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Compression/GzipCompressor.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,278 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "GzipCompressor.h" + +#include <stdio.h> +#include <string.h> +#include <zlib.h> + +#include "../OrthancException.h" +#include "../Logging.h" + +namespace Orthanc +{ + uint64_t GzipCompressor::GuessUncompressedSize(const void* compressed, + size_t compressedSize) + { + /** + * "Is there a way to find out the size of the original file which + * is inside a GZIP file? [...] There is no truly reliable way, + * other than gunzipping the stream. You do not need to save the + * result of the decompression, so you can determine the size by + * simply reading and decoding the entire file without taking up + * space with the decompressed result. + * + * There is an unreliable way to determine the uncompressed size, + * which is to look at the last four bytes of the gzip file, which + * is the uncompressed length of that entry modulo 232 in little + * endian order. + * + * It is unreliable because a) the uncompressed data may be longer + * than 2^32 bytes, and b) the gzip file may consist of multiple + * gzip streams, in which case you would find the length of only + * the last of those streams. + * + * If you are in control of the source of the gzip files, you know + * that they consist of single gzip streams, and you know that + * they are less than 2^32 bytes uncompressed, then and only then + * can you use those last four bytes with confidence." + * + * http://stackoverflow.com/a/9727599/881731 + **/ + + if (compressedSize < 4) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + + const uint8_t* p = reinterpret_cast<const uint8_t*>(compressed) + compressedSize - 4; + + return ((static_cast<uint32_t>(p[0]) << 0) + + (static_cast<uint32_t>(p[1]) << 8) + + (static_cast<uint32_t>(p[2]) << 16) + + (static_cast<uint32_t>(p[3]) << 24)); + } + + + + void GzipCompressor::Compress(std::string& compressed, + const void* uncompressed, + size_t uncompressedSize) + { + uLongf compressedSize = compressBound(uncompressedSize) + 1024 /* security margin */; + if (compressedSize == 0) + { + compressedSize = 1; + } + + uint8_t* target; + if (HasPrefixWithUncompressedSize()) + { + compressed.resize(compressedSize + sizeof(uint64_t)); + target = reinterpret_cast<uint8_t*>(&compressed[0]) + sizeof(uint64_t); + } + else + { + compressed.resize(compressedSize); + target = reinterpret_cast<uint8_t*>(&compressed[0]); + } + + z_stream stream; + memset(&stream, 0, sizeof(stream)); + + stream.next_in = const_cast<Bytef*>(reinterpret_cast<const Bytef*>(uncompressed)); + stream.next_out = reinterpret_cast<Bytef*>(target); + + stream.avail_in = static_cast<uInt>(uncompressedSize); + stream.avail_out = static_cast<uInt>(compressedSize); + + // Ensure no overflow (if the buffer is too large for the current archicture) + if (static_cast<size_t>(stream.avail_in) != uncompressedSize || + static_cast<size_t>(stream.avail_out) != compressedSize) + { + throw OrthancException(ErrorCode_NotEnoughMemory); + } + + // Initialize the compression engine + int error = deflateInit2(&stream, + GetCompressionLevel(), + Z_DEFLATED, + MAX_WBITS + 16, // ask for gzip output + 8, // default memory level + Z_DEFAULT_STRATEGY); + + if (error != Z_OK) + { + // Cannot initialize zlib + compressed.clear(); + throw OrthancException(ErrorCode_InternalError); + } + + // Compress the input buffer + error = deflate(&stream, Z_FINISH); + + if (error != Z_STREAM_END) + { + deflateEnd(&stream); + compressed.clear(); + + switch (error) + { + case Z_MEM_ERROR: + throw OrthancException(ErrorCode_NotEnoughMemory); + + default: + throw OrthancException(ErrorCode_InternalError); + } + } + + size_t size = stream.total_out; + + if (deflateEnd(&stream) != Z_OK) + { + throw OrthancException(ErrorCode_InternalError); + } + + // The compression was successful + if (HasPrefixWithUncompressedSize()) + { + uint64_t s = static_cast<uint64_t>(uncompressedSize); + memcpy(&compressed[0], &s, sizeof(uint64_t)); + compressed.resize(size + sizeof(uint64_t)); + } + else + { + compressed.resize(size); + } + } + + + void GzipCompressor::Uncompress(std::string& uncompressed, + const void* compressed, + size_t compressedSize) + { + uint64_t uncompressedSize; + const uint8_t* source = reinterpret_cast<const uint8_t*>(compressed); + + if (HasPrefixWithUncompressedSize()) + { + uncompressedSize = ReadUncompressedSizePrefix(compressed, compressedSize); + source += sizeof(uint64_t); + compressedSize -= sizeof(uint64_t); + } + else + { + uncompressedSize = GuessUncompressedSize(compressed, compressedSize); + } + + try + { + uncompressed.resize(static_cast<size_t>(uncompressedSize)); + } + catch (...) + { + throw OrthancException(ErrorCode_NotEnoughMemory); + } + + z_stream stream; + memset(&stream, 0, sizeof(stream)); + + char dummy = '\0'; // zlib does not like NULL output buffers (even if the uncompressed data is empty) + stream.next_in = const_cast<Bytef*>(source); + stream.next_out = reinterpret_cast<Bytef*>(uncompressedSize == 0 ? &dummy : &uncompressed[0]); + + stream.avail_in = static_cast<uInt>(compressedSize); + stream.avail_out = static_cast<uInt>(uncompressedSize); + + // Ensure no overflow (if the buffer is too large for the current archicture) + if (static_cast<size_t>(stream.avail_in) != compressedSize || + static_cast<size_t>(stream.avail_out) != uncompressedSize) + { + throw OrthancException(ErrorCode_NotEnoughMemory); + } + + // Initialize the compression engine + int error = inflateInit2(&stream, + MAX_WBITS + 16); // this is a gzip input + + if (error != Z_OK) + { + // Cannot initialize zlib + uncompressed.clear(); + throw OrthancException(ErrorCode_InternalError); + } + + // Uncompress the input buffer + error = inflate(&stream, Z_FINISH); + + if (error != Z_STREAM_END) + { + inflateEnd(&stream); + uncompressed.clear(); + + switch (error) + { + case Z_MEM_ERROR: + throw OrthancException(ErrorCode_NotEnoughMemory); + + case Z_BUF_ERROR: + case Z_NEED_DICT: + throw OrthancException(ErrorCode_BadFileFormat); + + default: + throw OrthancException(ErrorCode_InternalError); + } + } + + size_t size = stream.total_out; + + if (inflateEnd(&stream) != Z_OK) + { + uncompressed.clear(); + throw OrthancException(ErrorCode_InternalError); + } + + if (size != uncompressedSize) + { + uncompressed.clear(); + + // The uncompressed size was not that properly guess, presumably + // because of a file size over 4GB. Should fallback to + // stream-based decompression. + LOG(ERROR) << "The uncompressed size of a gzip-encoded buffer was not properly guessed"; + throw OrthancException(ErrorCode_NotImplemented); + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Compression/GzipCompressor.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,60 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "DeflateBaseCompressor.h" + +namespace Orthanc +{ + class GzipCompressor : public DeflateBaseCompressor + { + private: + uint64_t GuessUncompressedSize(const void* compressed, + size_t compressedSize); + + public: + GzipCompressor() + { + SetPrefixWithUncompressedSize(false); + } + + virtual void Compress(std::string& compressed, + const void* uncompressed, + size_t uncompressedSize); + + virtual void Uncompress(std::string& uncompressed, + const void* compressed, + size_t compressedSize); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Compression/HierarchicalZipWriter.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,182 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "HierarchicalZipWriter.h" + +#include "../Toolbox.h" +#include "../OrthancException.h" + +#include <boost/lexical_cast.hpp> + +namespace Orthanc +{ + std::string HierarchicalZipWriter::Index::KeepAlphanumeric(const std::string& source) + { + std::string result; + + bool lastSpace = false; + + result.reserve(source.size()); + for (size_t i = 0; i < source.size(); i++) + { + char c = source[i]; + if (c == '^') + c = ' '; + + if (c <= 127 && + c >= 0) + { + if (isspace(c)) + { + if (!lastSpace) + { + lastSpace = true; + result.push_back(' '); + } + } + else if (isalnum(c) || + c == '.' || + c == '_') + { + result.push_back(c); + lastSpace = false; + } + } + } + + return Toolbox::StripSpaces(result); + } + + std::string HierarchicalZipWriter::Index::GetCurrentDirectoryPath() const + { + std::string result; + + Stack::const_iterator it = stack_.begin(); + ++it; // Skip the root node (to avoid absolute paths) + + while (it != stack_.end()) + { + result += (*it)->name_ + "/"; + ++it; + } + + return result; + } + + std::string HierarchicalZipWriter::Index::EnsureUniqueFilename(const char* filename) + { + std::string standardized = KeepAlphanumeric(filename); + + Directory& d = *stack_.back(); + Directory::Content::iterator it = d.content_.find(standardized); + + if (it == d.content_.end()) + { + d.content_[standardized] = 1; + return standardized; + } + else + { + it->second++; + return standardized + "-" + boost::lexical_cast<std::string>(it->second); + } + } + + HierarchicalZipWriter::Index::Index() + { + stack_.push_back(new Directory); + } + + HierarchicalZipWriter::Index::~Index() + { + for (Stack::iterator it = stack_.begin(); it != stack_.end(); ++it) + { + delete *it; + } + } + + std::string HierarchicalZipWriter::Index::OpenFile(const char* name) + { + return GetCurrentDirectoryPath() + EnsureUniqueFilename(name); + } + + void HierarchicalZipWriter::Index::OpenDirectory(const char* name) + { + std::string d = EnsureUniqueFilename(name); + + // Push the new directory onto the stack + stack_.push_back(new Directory); + stack_.back()->name_ = d; + } + + void HierarchicalZipWriter::Index::CloseDirectory() + { + if (IsRoot()) + { + // Cannot close the root node + throw OrthancException(ErrorCode_BadSequenceOfCalls); + } + + delete stack_.back(); + stack_.pop_back(); + } + + + HierarchicalZipWriter::HierarchicalZipWriter(const char* path) + { + writer_.SetOutputPath(path); + writer_.Open(); + } + + HierarchicalZipWriter::~HierarchicalZipWriter() + { + writer_.Close(); + } + + void HierarchicalZipWriter::OpenFile(const char* name) + { + std::string p = indexer_.OpenFile(name); + writer_.OpenFile(p.c_str()); + } + + void HierarchicalZipWriter::OpenDirectory(const char* name) + { + indexer_.OpenDirectory(name); + } + + void HierarchicalZipWriter::CloseDirectory() + { + indexer_.CloseDirectory(); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Compression/HierarchicalZipWriter.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,153 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "ZipWriter.h" + +#include <map> +#include <list> +#include <boost/lexical_cast.hpp> + +#if ORTHANC_BUILD_UNIT_TESTS == 1 +# include <gtest/gtest_prod.h> +#endif + +namespace Orthanc +{ + class HierarchicalZipWriter + { +#if ORTHANC_BUILD_UNIT_TESTS == 1 + FRIEND_TEST(HierarchicalZipWriter, Index); + FRIEND_TEST(HierarchicalZipWriter, Filenames); +#endif + + private: + class Index + { + private: + struct Directory + { + typedef std::map<std::string, unsigned int> Content; + + std::string name_; + Content content_; + }; + + typedef std::list<Directory*> Stack; + + Stack stack_; + + std::string EnsureUniqueFilename(const char* filename); + + public: + Index(); + + ~Index(); + + bool IsRoot() const + { + return stack_.size() == 1; + } + + std::string OpenFile(const char* name); + + void OpenDirectory(const char* name); + + void CloseDirectory(); + + std::string GetCurrentDirectoryPath() const; + + static std::string KeepAlphanumeric(const std::string& source); + }; + + Index indexer_; + ZipWriter writer_; + + public: + HierarchicalZipWriter(const char* path); + + ~HierarchicalZipWriter(); + + void SetZip64(bool isZip64) + { + writer_.SetZip64(isZip64); + } + + bool IsZip64() const + { + return writer_.IsZip64(); + } + + void SetCompressionLevel(uint8_t level) + { + writer_.SetCompressionLevel(level); + } + + uint8_t GetCompressionLevel() const + { + return writer_.GetCompressionLevel(); + } + + void SetAppendToExisting(bool append) + { + writer_.SetAppendToExisting(append); + } + + bool IsAppendToExisting() const + { + return writer_.IsAppendToExisting(); + } + + void OpenFile(const char* name); + + void OpenDirectory(const char* name); + + void CloseDirectory(); + + std::string GetCurrentDirectoryPath() const + { + return indexer_.GetCurrentDirectoryPath(); + } + + void Write(const char* data, size_t length) + { + writer_.Write(data, length); + } + + void Write(const std::string& data) + { + writer_.Write(data); + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Compression/IBufferCompressor.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,74 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <string> +#include <boost/noncopyable.hpp> + +namespace Orthanc +{ + class IBufferCompressor : public boost::noncopyable + { + public: + virtual ~IBufferCompressor() + { + } + + virtual void Compress(std::string& compressed, + const void* uncompressed, + size_t uncompressedSize) = 0; + + virtual void Uncompress(std::string& uncompressed, + const void* compressed, + size_t compressedSize) = 0; + + static void Compress(std::string& compressed, + IBufferCompressor& compressor, + const std::string& uncompressed) + { + compressor.Compress(compressed, + uncompressed.size() == 0 ? NULL : uncompressed.c_str(), + uncompressed.size()); + } + + static void Uncompress(std::string& uncompressed, + IBufferCompressor& compressor, + const std::string& compressed) + { + compressor.Uncompress(uncompressed, + compressed.size() == 0 ? NULL : compressed.c_str(), + compressed.size()); + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Compression/ZipWriter.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,259 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" + +#ifndef NOMINMAX +#define NOMINMAX +#endif + +#include "ZipWriter.h" + +#include <limits> +#include <boost/filesystem.hpp> +#include <boost/date_time/posix_time/posix_time.hpp> + +#include "../../Resources/ThirdParty/minizip/zip.h" +#include "../OrthancException.h" +#include "../Logging.h" + + +static void PrepareFileInfo(zip_fileinfo& zfi) +{ + memset(&zfi, 0, sizeof(zfi)); + + using namespace boost::posix_time; + ptime now = second_clock::local_time(); + + boost::gregorian::date today = now.date(); + ptime midnight(today); + + time_duration sinceMidnight = now - midnight; + zfi.tmz_date.tm_sec = sinceMidnight.seconds(); // seconds after the minute - [0,59] + zfi.tmz_date.tm_min = sinceMidnight.minutes(); // minutes after the hour - [0,59] + zfi.tmz_date.tm_hour = sinceMidnight.hours(); // hours since midnight - [0,23] + + // http://www.boost.org/doc/libs/1_35_0/doc/html/boost/gregorian/greg_day.html + zfi.tmz_date.tm_mday = today.day(); // day of the month - [1,31] + + // http://www.boost.org/doc/libs/1_35_0/doc/html/boost/gregorian/greg_month.html + zfi.tmz_date.tm_mon = today.month() - 1; // months since January - [0,11] + + // http://www.boost.org/doc/libs/1_35_0/doc/html/boost/gregorian/greg_year.html + zfi.tmz_date.tm_year = today.year(); // years - [1980..2044] +} + + + +namespace Orthanc +{ + struct ZipWriter::PImpl + { + zipFile file_; + + PImpl() : file_(NULL) + { + } + }; + + ZipWriter::ZipWriter() : + pimpl_(new PImpl), + isZip64_(false), + hasFileInZip_(false), + append_(false), + compressionLevel_(6) + { + } + + ZipWriter::~ZipWriter() + { + Close(); + } + + void ZipWriter::Close() + { + if (IsOpen()) + { + zipClose(pimpl_->file_, "Created by Orthanc"); + pimpl_->file_ = NULL; + hasFileInZip_ = false; + } + } + + bool ZipWriter::IsOpen() const + { + return pimpl_->file_ != NULL; + } + + void ZipWriter::Open() + { + if (IsOpen()) + { + return; + } + + if (path_.size() == 0) + { + LOG(ERROR) << "Please call SetOutputPath() before creating the file"; + throw OrthancException(ErrorCode_BadSequenceOfCalls); + } + + hasFileInZip_ = false; + + int mode = APPEND_STATUS_CREATE; + if (append_ && + boost::filesystem::exists(path_)) + { + mode = APPEND_STATUS_ADDINZIP; + } + + if (isZip64_) + { + pimpl_->file_ = zipOpen64(path_.c_str(), mode); + } + else + { + pimpl_->file_ = zipOpen(path_.c_str(), mode); + } + + if (!pimpl_->file_) + { + throw OrthancException(ErrorCode_CannotWriteFile); + } + } + + void ZipWriter::SetOutputPath(const char* path) + { + Close(); + path_ = path; + } + + void ZipWriter::SetZip64(bool isZip64) + { + Close(); + isZip64_ = isZip64; + } + + void ZipWriter::SetCompressionLevel(uint8_t level) + { + if (level >= 10) + { + LOG(ERROR) << "ZIP compression level must be between 0 (no compression) and 9 (highest compression)"; + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + Close(); + compressionLevel_ = level; + } + + void ZipWriter::OpenFile(const char* path) + { + Open(); + + zip_fileinfo zfi; + PrepareFileInfo(zfi); + + int result; + + if (isZip64_) + { + result = zipOpenNewFileInZip64(pimpl_->file_, path, + &zfi, + NULL, 0, + NULL, 0, + "", // Comment + Z_DEFLATED, + compressionLevel_, 1); + } + else + { + result = zipOpenNewFileInZip(pimpl_->file_, path, + &zfi, + NULL, 0, + NULL, 0, + "", // Comment + Z_DEFLATED, + compressionLevel_); + } + + if (result != 0) + { + throw OrthancException(ErrorCode_CannotWriteFile); + } + + hasFileInZip_ = true; + } + + + void ZipWriter::Write(const std::string& data) + { + if (data.size()) + { + Write(&data[0], data.size()); + } + } + + + void ZipWriter::Write(const char* data, size_t length) + { + if (!hasFileInZip_) + { + LOG(ERROR) << "Call first OpenFile()"; + throw OrthancException(ErrorCode_BadSequenceOfCalls); + } + + const size_t maxBytesInAStep = std::numeric_limits<int32_t>::max(); + + while (length > 0) + { + int bytes = static_cast<int32_t>(length <= maxBytesInAStep ? length : maxBytesInAStep); + + if (zipWriteInFileInZip(pimpl_->file_, data, bytes)) + { + throw OrthancException(ErrorCode_CannotWriteFile); + } + + data += bytes; + length -= bytes; + } + } + + + void ZipWriter::SetAppendToExisting(bool append) + { + Close(); + append_ = append; + } + + +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Compression/ZipWriter.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,99 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <stdint.h> +#include <string> +#include <boost/shared_ptr.hpp> + +namespace Orthanc +{ + class ZipWriter + { + private: + struct PImpl; + boost::shared_ptr<PImpl> pimpl_; + + bool isZip64_; + bool hasFileInZip_; + bool append_; + uint8_t compressionLevel_; + std::string path_; + + public: + ZipWriter(); + + ~ZipWriter(); + + void SetZip64(bool isZip64); + + bool IsZip64() const + { + return isZip64_; + } + + void SetCompressionLevel(uint8_t level); + + uint8_t GetCompressionLevel() const + { + return compressionLevel_; + } + + void SetAppendToExisting(bool append); + + bool IsAppendToExisting() const + { + return append_; + } + + void Open(); + + void Close(); + + bool IsOpen() const; + + void SetOutputPath(const char* path); + + const std::string& GetOutputPath() const + { + return path_; + } + + void OpenFile(const char* path); + + void Write(const char* data, size_t length); + + void Write(const std::string& data); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Compression/ZlibCompressor.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,159 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "ZlibCompressor.h" + +#include "../OrthancException.h" +#include "../Logging.h" + +#include <stdio.h> +#include <string.h> +#include <zlib.h> + +namespace Orthanc +{ + void ZlibCompressor::Compress(std::string& compressed, + const void* uncompressed, + size_t uncompressedSize) + { + if (uncompressedSize == 0) + { + compressed.clear(); + return; + } + + uLongf compressedSize = compressBound(uncompressedSize) + 1024 /* security margin */; + if (compressedSize == 0) + { + compressedSize = 1; + } + + uint8_t* target; + if (HasPrefixWithUncompressedSize()) + { + compressed.resize(compressedSize + sizeof(uint64_t)); + target = reinterpret_cast<uint8_t*>(&compressed[0]) + sizeof(uint64_t); + } + else + { + compressed.resize(compressedSize); + target = reinterpret_cast<uint8_t*>(&compressed[0]); + } + + int error = compress2(target, + &compressedSize, + const_cast<Bytef *>(static_cast<const Bytef *>(uncompressed)), + uncompressedSize, + GetCompressionLevel()); + + if (error != Z_OK) + { + compressed.clear(); + + switch (error) + { + case Z_MEM_ERROR: + throw OrthancException(ErrorCode_NotEnoughMemory); + + default: + throw OrthancException(ErrorCode_InternalError); + } + } + + // The compression was successful + if (HasPrefixWithUncompressedSize()) + { + uint64_t s = static_cast<uint64_t>(uncompressedSize); + memcpy(&compressed[0], &s, sizeof(uint64_t)); + compressed.resize(compressedSize + sizeof(uint64_t)); + } + else + { + compressed.resize(compressedSize); + } + } + + + void ZlibCompressor::Uncompress(std::string& uncompressed, + const void* compressed, + size_t compressedSize) + { + if (compressedSize == 0) + { + uncompressed.clear(); + return; + } + + if (!HasPrefixWithUncompressedSize()) + { + LOG(ERROR) << "Cannot guess the uncompressed size of a zlib-encoded buffer"; + throw OrthancException(ErrorCode_InternalError); + } + + uint64_t uncompressedSize = ReadUncompressedSizePrefix(compressed, compressedSize); + + try + { + uncompressed.resize(static_cast<size_t>(uncompressedSize)); + } + catch (...) + { + throw OrthancException(ErrorCode_NotEnoughMemory); + } + + uLongf tmp = static_cast<uLongf>(uncompressedSize); + int error = uncompress + (reinterpret_cast<uint8_t*>(&uncompressed[0]), + &tmp, + reinterpret_cast<const uint8_t*>(compressed) + sizeof(uint64_t), + compressedSize - sizeof(uint64_t)); + + if (error != Z_OK) + { + uncompressed.clear(); + + switch (error) + { + case Z_DATA_ERROR: + throw OrthancException(ErrorCode_CorruptedFile); + + case Z_MEM_ERROR: + throw OrthancException(ErrorCode_NotEnoughMemory); + + default: + throw OrthancException(ErrorCode_InternalError); + } + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Compression/ZlibCompressor.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,56 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "DeflateBaseCompressor.h" + +namespace Orthanc +{ + class ZlibCompressor : public DeflateBaseCompressor + { + public: + ZlibCompressor() + { + SetPrefixWithUncompressedSize(true); + } + + virtual void Compress(std::string& compressed, + const void* uncompressed, + size_t uncompressedSize); + + virtual void Uncompress(std::string& uncompressed, + const void* compressed, + size_t compressedSize); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomArray.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,72 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "DicomArray.h" + +#include <stdio.h> + +namespace Orthanc +{ + DicomArray::DicomArray(const DicomMap& map) + { + elements_.reserve(map.map_.size()); + + for (DicomMap::Map::const_iterator it = + map.map_.begin(); it != map.map_.end(); ++it) + { + elements_.push_back(new DicomElement(it->first, *it->second)); + } + } + + + DicomArray::~DicomArray() + { + for (size_t i = 0; i < elements_.size(); i++) + { + delete elements_[i]; + } + } + + + void DicomArray::Print(FILE* fp) const + { + for (size_t i = 0; i < elements_.size(); i++) + { + DicomTag t = elements_[i]->GetTag(); + const DicomValue& v = elements_[i]->GetValue(); + std::string s = v.IsNull() ? "(null)" : v.GetContent(); + printf("0x%04x 0x%04x [%s]\n", t.GetGroup(), t.GetElement(), s.c_str()); + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomArray.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,67 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "DicomElement.h" +#include "DicomMap.h" + +#include <vector> + +namespace Orthanc +{ + class DicomArray : public boost::noncopyable + { + private: + typedef std::vector<DicomElement*> Elements; + + Elements elements_; + + public: + explicit DicomArray(const DicomMap& map); + + ~DicomArray(); + + size_t GetSize() const + { + return elements_.size(); + } + + const DicomElement& GetElement(size_t i) const + { + return *elements_[i]; + } + + void Print(FILE* fp) const; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomElement.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,93 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "DicomValue.h" +#include "DicomTag.h" + +namespace Orthanc +{ + class DicomElement : public boost::noncopyable + { + private: + DicomTag tag_; + DicomValue* value_; + + public: + DicomElement(uint16_t group, + uint16_t element, + const DicomValue& value) : + tag_(group, element), + value_(value.Clone()) + { + } + + DicomElement(const DicomTag& tag, + const DicomValue& value) : + tag_(tag), + value_(value.Clone()) + { + } + + ~DicomElement() + { + delete value_; + } + + const DicomTag& GetTag() const + { + return tag_; + } + + const DicomValue& GetValue() const + { + return *value_; + } + + uint16_t GetTagGroup() const + { + return tag_.GetGroup(); + } + + uint16_t GetTagElement() const + { + return tag_.GetElement(); + } + + bool operator< (const DicomElement& other) const + { + return GetTag() < other.GetTag(); + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomImageInformation.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,278 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" + +#ifndef NOMINMAX +#define NOMINMAX +#endif + +#include "DicomImageInformation.h" + +#include "../OrthancException.h" +#include "../Toolbox.h" +#include <boost/lexical_cast.hpp> +#include <limits> +#include <cassert> +#include <stdio.h> + +namespace Orthanc +{ + DicomImageInformation::DicomImageInformation(const DicomMap& values) + { + unsigned int pixelRepresentation; + unsigned int planarConfiguration = 0; + + try + { + std::string p = values.GetValue(DICOM_TAG_PHOTOMETRIC_INTERPRETATION).GetContent(); + Toolbox::ToUpperCase(p); + + if (p == "RGB") + { + photometric_ = PhotometricInterpretation_RGB; + } + else if (p == "MONOCHROME1") + { + photometric_ = PhotometricInterpretation_Monochrome1; + } + else if (p == "MONOCHROME2") + { + photometric_ = PhotometricInterpretation_Monochrome2; + } + else if (p == "PALETTE COLOR") + { + photometric_ = PhotometricInterpretation_Palette; + } + else if (p == "HSV") + { + photometric_ = PhotometricInterpretation_HSV; + } + else if (p == "ARGB") + { + photometric_ = PhotometricInterpretation_ARGB; + } + else if (p == "CMYK") + { + photometric_ = PhotometricInterpretation_CMYK; + } + else if (p == "YBR_FULL") + { + photometric_ = PhotometricInterpretation_YBRFull; + } + else if (p == "YBR_FULL_422") + { + photometric_ = PhotometricInterpretation_YBRFull422; + } + else if (p == "YBR_PARTIAL_420") + { + photometric_ = PhotometricInterpretation_YBRPartial420; + } + else if (p == "YBR_PARTIAL_422") + { + photometric_ = PhotometricInterpretation_YBRPartial422; + } + else if (p == "YBR_ICT") + { + photometric_ = PhotometricInterpretation_YBR_ICT; + } + else if (p == "YBR_RCT") + { + photometric_ = PhotometricInterpretation_YBR_RCT; + } + else + { + photometric_ = PhotometricInterpretation_Unknown; + } + + width_ = boost::lexical_cast<unsigned int>(values.GetValue(DICOM_TAG_COLUMNS).GetContent()); + height_ = boost::lexical_cast<unsigned int>(values.GetValue(DICOM_TAG_ROWS).GetContent()); + bitsAllocated_ = boost::lexical_cast<unsigned int>(values.GetValue(DICOM_TAG_BITS_ALLOCATED).GetContent()); + + try + { + samplesPerPixel_ = boost::lexical_cast<unsigned int>(values.GetValue(DICOM_TAG_SAMPLES_PER_PIXEL).GetContent()); + } + catch (OrthancException&) + { + samplesPerPixel_ = 1; // Assume 1 color channel + } + + try + { + bitsStored_ = boost::lexical_cast<unsigned int>(values.GetValue(DICOM_TAG_BITS_STORED).GetContent()); + } + catch (OrthancException&) + { + bitsStored_ = bitsAllocated_; + } + + try + { + highBit_ = boost::lexical_cast<unsigned int>(values.GetValue(DICOM_TAG_HIGH_BIT).GetContent()); + } + catch (OrthancException&) + { + highBit_ = bitsStored_ - 1; + } + + try + { + pixelRepresentation = boost::lexical_cast<unsigned int>(values.GetValue(DICOM_TAG_PIXEL_REPRESENTATION).GetContent()); + } + catch (OrthancException&) + { + pixelRepresentation = 0; // Assume unsigned pixels + } + + if (samplesPerPixel_ > 1) + { + // The "Planar Configuration" is only set when "Samples per Pixels" is greater than 1 + // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#sect_C.7.6.3.1.3 + try + { + planarConfiguration = boost::lexical_cast<unsigned int>(values.GetValue(DICOM_TAG_PLANAR_CONFIGURATION).GetContent()); + } + catch (OrthancException&) + { + planarConfiguration = 0; // Assume interleaved color channels + } + } + } + catch (boost::bad_lexical_cast&) + { + throw OrthancException(ErrorCode_NotImplemented); + } + catch (OrthancException&) + { + throw OrthancException(ErrorCode_NotImplemented); + } + + if (values.HasTag(DICOM_TAG_NUMBER_OF_FRAMES)) + { + try + { + numberOfFrames_ = boost::lexical_cast<unsigned int>(values.GetValue(DICOM_TAG_NUMBER_OF_FRAMES).GetContent()); + } + catch (boost::bad_lexical_cast&) + { + throw OrthancException(ErrorCode_NotImplemented); + } + } + else + { + numberOfFrames_ = 1; + } + + if ((bitsAllocated_ != 8 && bitsAllocated_ != 16 && + bitsAllocated_ != 24 && bitsAllocated_ != 32) || + numberOfFrames_ == 0 || + (planarConfiguration != 0 && planarConfiguration != 1)) + { + throw OrthancException(ErrorCode_NotImplemented); + } + + if (samplesPerPixel_ == 0) + { + throw OrthancException(ErrorCode_NotImplemented); + } + + bytesPerValue_ = bitsAllocated_ / 8; + + isPlanar_ = (planarConfiguration != 0 ? true : false); + isSigned_ = (pixelRepresentation != 0 ? true : false); + } + + + bool DicomImageInformation::ExtractPixelFormat(PixelFormat& format, + bool ignorePhotometricInterpretation) const + { + if (photometric_ == PhotometricInterpretation_Palette) + { + if (GetBitsStored() == 8 && GetChannelCount() == 1 && !IsSigned()) + { + format = PixelFormat_RGB24; + return true; + } + + if (GetBitsStored() == 16 && GetChannelCount() == 1 && !IsSigned()) + { + format = PixelFormat_RGB48; + return true; + } + } + + if (ignorePhotometricInterpretation || + photometric_ == PhotometricInterpretation_Monochrome1 || + photometric_ == PhotometricInterpretation_Monochrome2) + { + if (GetBitsStored() == 8 && GetChannelCount() == 1 && !IsSigned()) + { + format = PixelFormat_Grayscale8; + return true; + } + + if (GetBitsAllocated() == 16 && GetChannelCount() == 1 && !IsSigned()) + { + format = PixelFormat_Grayscale16; + return true; + } + + if (GetBitsAllocated() == 16 && GetChannelCount() == 1 && IsSigned()) + { + format = PixelFormat_SignedGrayscale16; + return true; + } + } + + if (GetBitsStored() == 8 && + GetChannelCount() == 3 && + !IsSigned() && + (ignorePhotometricInterpretation || photometric_ == PhotometricInterpretation_RGB)) + { + format = PixelFormat_RGB24; + return true; + } + + return false; + } + + + size_t DicomImageInformation::GetFrameSize() const + { + return (GetHeight() * + GetWidth() * + GetBytesPerValue() * + GetChannelCount()); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomImageInformation.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,128 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "DicomMap.h" + +#include <stdint.h> + +namespace Orthanc +{ + class DicomImageInformation + { + private: + unsigned int width_; + unsigned int height_; + unsigned int samplesPerPixel_; + unsigned int numberOfFrames_; + + bool isPlanar_; + bool isSigned_; + size_t bytesPerValue_; + + unsigned int bitsAllocated_; + unsigned int bitsStored_; + unsigned int highBit_; + + PhotometricInterpretation photometric_; + + public: + explicit DicomImageInformation(const DicomMap& values); + + unsigned int GetWidth() const + { + return width_; + } + + unsigned int GetHeight() const + { + return height_; + } + + unsigned int GetNumberOfFrames() const + { + return numberOfFrames_; + } + + unsigned int GetChannelCount() const + { + return samplesPerPixel_; + } + + unsigned int GetBitsStored() const + { + return bitsStored_; + } + + size_t GetBytesPerValue() const + { + return bytesPerValue_; + } + + bool IsSigned() const + { + return isSigned_; + } + + unsigned int GetBitsAllocated() const + { + return bitsAllocated_; + } + + unsigned int GetHighBit() const + { + return highBit_; + } + + bool IsPlanar() const + { + return isPlanar_; + } + + unsigned int GetShift() const + { + return highBit_ + 1 - bitsStored_; + } + + PhotometricInterpretation GetPhotometricInterpretation() const + { + return photometric_; + } + + bool ExtractPixelFormat(PixelFormat& format, + bool ignorePhotometricInterpretation) const; + + size_t GetFrameSize() const; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomInstanceHasher.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,109 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "DicomInstanceHasher.h" + +#include "../OrthancException.h" +#include "../Toolbox.h" + +namespace Orthanc +{ + void DicomInstanceHasher::Setup(const std::string& patientId, + const std::string& studyUid, + const std::string& seriesUid, + const std::string& instanceUid) + { + patientId_ = patientId; + studyUid_ = studyUid; + seriesUid_ = seriesUid; + instanceUid_ = instanceUid; + + if (studyUid_.size() == 0 || + seriesUid_.size() == 0 || + instanceUid_.size() == 0) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + } + + DicomInstanceHasher::DicomInstanceHasher(const DicomMap& instance) + { + const DicomValue* patientId = instance.TestAndGetValue(DICOM_TAG_PATIENT_ID); + + Setup(patientId == NULL ? "" : patientId->GetContent(), + instance.GetValue(DICOM_TAG_STUDY_INSTANCE_UID).GetContent(), + instance.GetValue(DICOM_TAG_SERIES_INSTANCE_UID).GetContent(), + instance.GetValue(DICOM_TAG_SOP_INSTANCE_UID).GetContent()); + } + + const std::string& DicomInstanceHasher::HashPatient() + { + if (patientHash_.size() == 0) + { + Toolbox::ComputeSHA1(patientHash_, patientId_); + } + + return patientHash_; + } + + const std::string& DicomInstanceHasher::HashStudy() + { + if (studyHash_.size() == 0) + { + Toolbox::ComputeSHA1(studyHash_, patientId_ + "|" + studyUid_); + } + + return studyHash_; + } + + const std::string& DicomInstanceHasher::HashSeries() + { + if (seriesHash_.size() == 0) + { + Toolbox::ComputeSHA1(seriesHash_, patientId_ + "|" + studyUid_ + "|" + seriesUid_); + } + + return seriesHash_; + } + + const std::string& DicomInstanceHasher::HashInstance() + { + if (instanceHash_.size() == 0) + { + Toolbox::ComputeSHA1(instanceHash_, patientId_ + "|" + studyUid_ + "|" + seriesUid_ + "|" + instanceUid_); + } + + return instanceHash_; + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomInstanceHasher.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,107 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "DicomMap.h" + +namespace Orthanc +{ + /** + * This class implements the hashing mechanism that is used to + * convert DICOM unique identifiers to Orthanc identifiers. Any + * Orthanc identifier for a DICOM resource corresponds to the SHA-1 + * hash of the DICOM identifiers. + + * \note SHA-1 hash is used because it is less sensitive to + * collision attacks than MD5. <a + * href="http://en.wikipedia.org/wiki/SHA-256#Comparison_of_SHA_functions">[Reference]</a> + **/ + class DicomInstanceHasher + { + private: + std::string patientId_; + std::string studyUid_; + std::string seriesUid_; + std::string instanceUid_; + + std::string patientHash_; + std::string studyHash_; + std::string seriesHash_; + std::string instanceHash_; + + void Setup(const std::string& patientId, + const std::string& studyUid, + const std::string& seriesUid, + const std::string& instanceUid); + + public: + DicomInstanceHasher(const DicomMap& instance); + + DicomInstanceHasher(const std::string& patientId, + const std::string& studyUid, + const std::string& seriesUid, + const std::string& instanceUid) + { + Setup(patientId, studyUid, seriesUid, instanceUid); + } + + const std::string& GetPatientId() const + { + return patientId_; + } + + const std::string& GetStudyUid() const + { + return studyUid_; + } + + const std::string& GetSeriesUid() const + { + return seriesUid_; + } + + const std::string& GetInstanceUid() const + { + return instanceUid_; + } + + const std::string& HashPatient(); + + const std::string& HashStudy(); + + const std::string& HashSeries(); + + const std::string& HashInstance(); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomIntegerPixelAccessor.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,204 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" + +#ifndef NOMINMAX +#define NOMINMAX +#endif + +#include "DicomIntegerPixelAccessor.h" + +#include "../OrthancException.h" +#include <boost/lexical_cast.hpp> +#include <limits> +#include <cassert> +#include <stdio.h> + +namespace Orthanc +{ + DicomIntegerPixelAccessor::DicomIntegerPixelAccessor(const DicomMap& values, + const void* pixelData, + size_t size) : + information_(values), + pixelData_(pixelData), + size_(size) + { + if (information_.GetBitsAllocated() > 32 || + information_.GetBitsStored() >= 32) + { + // Not available, as the accessor internally uses int32_t values + throw OrthancException(ErrorCode_NotImplemented); + } + + frame_ = 0; + frameOffset_ = information_.GetFrameSize(); + + if (information_.GetNumberOfFrames() * frameOffset_ > size) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + + if (information_.IsSigned()) + { + // Pixels are signed + mask_ = (1 << (information_.GetBitsStored() - 1)) - 1; + signMask_ = (1 << (information_.GetBitsStored() - 1)); + } + else + { + // Pixels are unsigned + mask_ = (1 << information_.GetBitsStored()) - 1; + signMask_ = 0; + } + + if (information_.IsPlanar()) + { + /** + * Each color plane shall be sent contiguously. For RGB images, + * this means the order of the pixel values sent is R1, R2, R3, + * ..., G1, G2, G3, ..., B1, B2, B3, etc. + **/ + rowOffset_ = information_.GetWidth() * information_.GetBytesPerValue(); + } + else + { + /** + * The sample values for the first pixel are followed by the + * sample values for the second pixel, etc. For RGB images, this + * means the order of the pixel values sent shall be R1, G1, B1, + * R2, G2, B2, ..., etc. + **/ + rowOffset_ = information_.GetWidth() * information_.GetBytesPerValue() * information_.GetChannelCount(); + } + } + + + void DicomIntegerPixelAccessor::GetExtremeValues(int32_t& min, + int32_t& max) const + { + if (information_.GetHeight() == 0 || information_.GetWidth() == 0) + { + min = max = 0; + return; + } + + min = std::numeric_limits<int32_t>::max(); + max = std::numeric_limits<int32_t>::min(); + + for (unsigned int y = 0; y < information_.GetHeight(); y++) + { + for (unsigned int x = 0; x < information_.GetWidth(); x++) + { + for (unsigned int c = 0; c < information_.GetChannelCount(); c++) + { + int32_t v = GetValue(x, y); + if (v < min) + min = v; + if (v > max) + max = v; + } + } + } + } + + + int32_t DicomIntegerPixelAccessor::GetValue(unsigned int x, + unsigned int y, + unsigned int channel) const + { + assert(x < information_.GetWidth() && + y < information_.GetHeight() && + channel < information_.GetChannelCount()); + + const uint8_t* pixel = reinterpret_cast<const uint8_t*>(pixelData_) + + y * rowOffset_ + frame_ * frameOffset_; + + // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#sect_C.7.6.3.1.3 + if (information_.IsPlanar()) + { + /** + * Each color plane shall be sent contiguously. For RGB images, + * this means the order of the pixel values sent is R1, R2, R3, + * ..., G1, G2, G3, ..., B1, B2, B3, etc. + **/ + assert(frameOffset_ % information_.GetChannelCount() == 0); + pixel += channel * frameOffset_ / information_.GetChannelCount() + x * information_.GetBytesPerValue(); + } + else + { + /** + * The sample values for the first pixel are followed by the + * sample values for the second pixel, etc. For RGB images, this + * means the order of the pixel values sent shall be R1, G1, B1, + * R2, G2, B2, ..., etc. + **/ + pixel += channel * information_.GetBytesPerValue() + x * information_.GetChannelCount() * information_.GetBytesPerValue(); + } + + uint32_t v; + v = pixel[0]; + if (information_.GetBytesPerValue() >= 2) + v = v + (static_cast<uint32_t>(pixel[1]) << 8); + if (information_.GetBytesPerValue() >= 3) + v = v + (static_cast<uint32_t>(pixel[2]) << 16); + if (information_.GetBytesPerValue() >= 4) + v = v + (static_cast<uint32_t>(pixel[3]) << 24); + + v = v >> information_.GetShift(); + + if (v & signMask_) + { + // Signed value + // http://en.wikipedia.org/wiki/Two%27s_complement#Subtraction_from_2N + return -static_cast<int32_t>(mask_) + static_cast<int32_t>(v & mask_) - 1; + } + else + { + // Unsigned value + return static_cast<int32_t>(v & mask_); + } + } + + + void DicomIntegerPixelAccessor::SetCurrentFrame(unsigned int frame) + { + if (frame >= information_.GetNumberOfFrames()) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + frame_ = frame; + } + +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomIntegerPixelAccessor.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,90 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "DicomMap.h" + +#include "DicomImageInformation.h" + +#include <stdint.h> + +namespace Orthanc +{ + class DicomIntegerPixelAccessor + { + private: + DicomImageInformation information_; + + uint32_t signMask_; + uint32_t mask_; + + const void* pixelData_; + size_t size_; + unsigned int frame_; + size_t frameOffset_; + size_t rowOffset_; + + public: + DicomIntegerPixelAccessor(const DicomMap& values, + const void* pixelData, + size_t size); + + const DicomImageInformation GetInformation() const + { + return information_; + } + + unsigned int GetCurrentFrame() const + { + return frame_; + } + + void SetCurrentFrame(unsigned int frame); + + void GetExtremeValues(int32_t& min, + int32_t& max) const; + + int32_t GetValue(unsigned int x, unsigned int y, unsigned int channel = 0) const; + + const void* GetPixelData() const + { + return pixelData_; + } + + size_t GetSize() const + { + return size_; + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomMap.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,975 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "DicomMap.h" + +#include <stdio.h> +#include <memory> + +#include "../Endianness.h" +#include "../Logging.h" +#include "../OrthancException.h" + + +namespace Orthanc +{ + static DicomTag patientTags[] = + { + //DicomTag(0x0010, 0x1010), // PatientAge + //DicomTag(0x0010, 0x1040) // PatientAddress + DicomTag(0x0010, 0x0010), // PatientName + DicomTag(0x0010, 0x0030), // PatientBirthDate + DicomTag(0x0010, 0x0040), // PatientSex + DicomTag(0x0010, 0x1000), // OtherPatientIDs + DICOM_TAG_PATIENT_ID + }; + + static DicomTag studyTags[] = + { + //DicomTag(0x0010, 0x1020), // PatientSize + //DicomTag(0x0010, 0x1030) // PatientWeight + DICOM_TAG_STUDY_DATE, + DicomTag(0x0008, 0x0030), // StudyTime + DicomTag(0x0020, 0x0010), // StudyID + DICOM_TAG_STUDY_DESCRIPTION, + DICOM_TAG_ACCESSION_NUMBER, + DICOM_TAG_STUDY_INSTANCE_UID, + DICOM_TAG_REQUESTED_PROCEDURE_DESCRIPTION, // New in db v6 + DICOM_TAG_INSTITUTION_NAME, // New in db v6 + DICOM_TAG_REQUESTING_PHYSICIAN, // New in db v6 + DICOM_TAG_REFERRING_PHYSICIAN_NAME // New in db v6 + }; + + static DicomTag seriesTags[] = + { + //DicomTag(0x0010, 0x1080), // MilitaryRank + DicomTag(0x0008, 0x0021), // SeriesDate + DicomTag(0x0008, 0x0031), // SeriesTime + DICOM_TAG_MODALITY, + DicomTag(0x0008, 0x0070), // Manufacturer + DicomTag(0x0008, 0x1010), // StationName + DICOM_TAG_SERIES_DESCRIPTION, + DicomTag(0x0018, 0x0015), // BodyPartExamined + DicomTag(0x0018, 0x0024), // SequenceName + DicomTag(0x0018, 0x1030), // ProtocolName + DicomTag(0x0020, 0x0011), // SeriesNumber + DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES, + DICOM_TAG_IMAGES_IN_ACQUISITION, + DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS, + DICOM_TAG_NUMBER_OF_SLICES, + DICOM_TAG_NUMBER_OF_TIME_SLICES, + DICOM_TAG_SERIES_INSTANCE_UID, + DICOM_TAG_IMAGE_ORIENTATION_PATIENT, // New in db v6 + DICOM_TAG_SERIES_TYPE, // New in db v6 + DICOM_TAG_OPERATOR_NAME, // New in db v6 + DICOM_TAG_PERFORMED_PROCEDURE_STEP_DESCRIPTION, // New in db v6 + DICOM_TAG_ACQUISITION_DEVICE_PROCESSING_DESCRIPTION, // New in db v6 + DICOM_TAG_CONTRAST_BOLUS_AGENT // New in db v6 + }; + + static DicomTag instanceTags[] = + { + DicomTag(0x0008, 0x0012), // InstanceCreationDate + DicomTag(0x0008, 0x0013), // InstanceCreationTime + DicomTag(0x0020, 0x0012), // AcquisitionNumber + DICOM_TAG_IMAGE_INDEX, + DICOM_TAG_INSTANCE_NUMBER, + DICOM_TAG_NUMBER_OF_FRAMES, + DICOM_TAG_TEMPORAL_POSITION_IDENTIFIER, + DICOM_TAG_SOP_INSTANCE_UID, + DICOM_TAG_IMAGE_POSITION_PATIENT, // New in db v6 + DICOM_TAG_IMAGE_COMMENTS // New in db v6 + }; + + + void DicomMap::LoadMainDicomTags(const DicomTag*& tags, + size_t& size, + ResourceType level) + { + switch (level) + { + case ResourceType_Patient: + tags = patientTags; + size = sizeof(patientTags) / sizeof(DicomTag); + break; + + case ResourceType_Study: + tags = studyTags; + size = sizeof(studyTags) / sizeof(DicomTag); + break; + + case ResourceType_Series: + tags = seriesTags; + size = sizeof(seriesTags) / sizeof(DicomTag); + break; + + case ResourceType_Instance: + tags = instanceTags; + size = sizeof(instanceTags) / sizeof(DicomTag); + break; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + void DicomMap::SetValue(uint16_t group, + uint16_t element, + DicomValue* value) + { + DicomTag tag(group, element); + Map::iterator it = map_.find(tag); + + if (it != map_.end()) + { + delete it->second; + it->second = value; + } + else + { + map_.insert(std::make_pair(tag, value)); + } + } + + void DicomMap::SetValue(DicomTag tag, + DicomValue* value) + { + SetValue(tag.GetGroup(), tag.GetElement(), value); + } + + + + + void DicomMap::Clear() + { + for (Map::iterator it = map_.begin(); it != map_.end(); ++it) + { + delete it->second; + } + + map_.clear(); + } + + + void DicomMap::ExtractTags(DicomMap& result, + const DicomTag* tags, + size_t count) const + { + result.Clear(); + + for (unsigned int i = 0; i < count; i++) + { + Map::const_iterator it = map_.find(tags[i]); + if (it != map_.end()) + { + result.SetValue(it->first, it->second->Clone()); + } + } + } + + + void DicomMap::ExtractPatientInformation(DicomMap& result) const + { + ExtractTags(result, patientTags, sizeof(patientTags) / sizeof(DicomTag)); + } + + void DicomMap::ExtractStudyInformation(DicomMap& result) const + { + ExtractTags(result, studyTags, sizeof(studyTags) / sizeof(DicomTag)); + } + + void DicomMap::ExtractSeriesInformation(DicomMap& result) const + { + ExtractTags(result, seriesTags, sizeof(seriesTags) / sizeof(DicomTag)); + } + + void DicomMap::ExtractInstanceInformation(DicomMap& result) const + { + ExtractTags(result, instanceTags, sizeof(instanceTags) / sizeof(DicomTag)); + } + + + + DicomMap* DicomMap::Clone() const + { + std::auto_ptr<DicomMap> result(new DicomMap); + + for (Map::const_iterator it = map_.begin(); it != map_.end(); ++it) + { + result->map_.insert(std::make_pair(it->first, it->second->Clone())); + } + + return result.release(); + } + + + void DicomMap::Assign(const DicomMap& other) + { + Clear(); + + for (Map::const_iterator it = other.map_.begin(); it != other.map_.end(); ++it) + { + map_.insert(std::make_pair(it->first, it->second->Clone())); + } + } + + + const DicomValue& DicomMap::GetValue(const DicomTag& tag) const + { + const DicomValue* value = TestAndGetValue(tag); + + if (value) + { + return *value; + } + else + { + throw OrthancException(ErrorCode_InexistentTag); + } + } + + + const DicomValue* DicomMap::TestAndGetValue(const DicomTag& tag) const + { + Map::const_iterator it = map_.find(tag); + + if (it == map_.end()) + { + return NULL; + } + else + { + return it->second; + } + } + + + void DicomMap::Remove(const DicomTag& tag) + { + Map::iterator it = map_.find(tag); + if (it != map_.end()) + { + delete it->second; + map_.erase(it); + } + } + + + static void SetupFindTemplate(DicomMap& result, + const DicomTag* tags, + size_t count) + { + result.Clear(); + + for (size_t i = 0; i < count; i++) + { + result.SetValue(tags[i], "", false); + } + } + + void DicomMap::SetupFindPatientTemplate(DicomMap& result) + { + SetupFindTemplate(result, patientTags, sizeof(patientTags) / sizeof(DicomTag)); + } + + void DicomMap::SetupFindStudyTemplate(DicomMap& result) + { + SetupFindTemplate(result, studyTags, sizeof(studyTags) / sizeof(DicomTag)); + result.SetValue(DICOM_TAG_ACCESSION_NUMBER, "", false); + result.SetValue(DICOM_TAG_PATIENT_ID, "", false); + + // These main DICOM tags are only indirectly related to the + // General Study Module, remove them + result.Remove(DICOM_TAG_INSTITUTION_NAME); + result.Remove(DICOM_TAG_REQUESTING_PHYSICIAN); + result.Remove(DICOM_TAG_REQUESTED_PROCEDURE_DESCRIPTION); + } + + void DicomMap::SetupFindSeriesTemplate(DicomMap& result) + { + SetupFindTemplate(result, seriesTags, sizeof(seriesTags) / sizeof(DicomTag)); + result.SetValue(DICOM_TAG_ACCESSION_NUMBER, "", false); + result.SetValue(DICOM_TAG_PATIENT_ID, "", false); + result.SetValue(DICOM_TAG_STUDY_INSTANCE_UID, "", false); + + // These tags are considered as "main" by Orthanc, but are not in the Series module + result.Remove(DicomTag(0x0008, 0x0070)); // Manufacturer + result.Remove(DicomTag(0x0008, 0x1010)); // Station name + result.Remove(DicomTag(0x0018, 0x0024)); // Sequence name + result.Remove(DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES); + result.Remove(DICOM_TAG_IMAGES_IN_ACQUISITION); + result.Remove(DICOM_TAG_NUMBER_OF_SLICES); + result.Remove(DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS); + result.Remove(DICOM_TAG_NUMBER_OF_TIME_SLICES); + result.Remove(DICOM_TAG_IMAGE_ORIENTATION_PATIENT); + result.Remove(DICOM_TAG_SERIES_TYPE); + result.Remove(DICOM_TAG_ACQUISITION_DEVICE_PROCESSING_DESCRIPTION); + result.Remove(DICOM_TAG_CONTRAST_BOLUS_AGENT); + } + + void DicomMap::SetupFindInstanceTemplate(DicomMap& result) + { + SetupFindTemplate(result, instanceTags, sizeof(instanceTags) / sizeof(DicomTag)); + result.SetValue(DICOM_TAG_ACCESSION_NUMBER, "", false); + result.SetValue(DICOM_TAG_PATIENT_ID, "", false); + result.SetValue(DICOM_TAG_STUDY_INSTANCE_UID, "", false); + result.SetValue(DICOM_TAG_SERIES_INSTANCE_UID, "", false); + } + + + void DicomMap::CopyTagIfExists(const DicomMap& source, + const DicomTag& tag) + { + if (source.HasTag(tag)) + { + SetValue(tag, source.GetValue(tag)); + } + } + + + bool DicomMap::IsMainDicomTag(const DicomTag& tag, ResourceType level) + { + DicomTag *tags = NULL; + size_t size; + + switch (level) + { + case ResourceType_Patient: + tags = patientTags; + size = sizeof(patientTags) / sizeof(DicomTag); + break; + + case ResourceType_Study: + tags = studyTags; + size = sizeof(studyTags) / sizeof(DicomTag); + break; + + case ResourceType_Series: + tags = seriesTags; + size = sizeof(seriesTags) / sizeof(DicomTag); + break; + + case ResourceType_Instance: + tags = instanceTags; + size = sizeof(instanceTags) / sizeof(DicomTag); + break; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + for (size_t i = 0; i < size; i++) + { + if (tags[i] == tag) + { + return true; + } + } + + return false; + } + + bool DicomMap::IsMainDicomTag(const DicomTag& tag) + { + return (IsMainDicomTag(tag, ResourceType_Patient) || + IsMainDicomTag(tag, ResourceType_Study) || + IsMainDicomTag(tag, ResourceType_Series) || + IsMainDicomTag(tag, ResourceType_Instance)); + } + + + void DicomMap::GetMainDicomTagsInternal(std::set<DicomTag>& result, ResourceType level) + { + DicomTag *tags = NULL; + size_t size; + + switch (level) + { + case ResourceType_Patient: + tags = patientTags; + size = sizeof(patientTags) / sizeof(DicomTag); + break; + + case ResourceType_Study: + tags = studyTags; + size = sizeof(studyTags) / sizeof(DicomTag); + break; + + case ResourceType_Series: + tags = seriesTags; + size = sizeof(seriesTags) / sizeof(DicomTag); + break; + + case ResourceType_Instance: + tags = instanceTags; + size = sizeof(instanceTags) / sizeof(DicomTag); + break; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + for (size_t i = 0; i < size; i++) + { + result.insert(tags[i]); + } + } + + + void DicomMap::GetMainDicomTags(std::set<DicomTag>& result, ResourceType level) + { + result.clear(); + GetMainDicomTagsInternal(result, level); + } + + + void DicomMap::GetMainDicomTags(std::set<DicomTag>& result) + { + result.clear(); + GetMainDicomTagsInternal(result, ResourceType_Patient); + GetMainDicomTagsInternal(result, ResourceType_Study); + GetMainDicomTagsInternal(result, ResourceType_Series); + GetMainDicomTagsInternal(result, ResourceType_Instance); + } + + + void DicomMap::GetTags(std::set<DicomTag>& tags) const + { + tags.clear(); + + for (Map::const_iterator it = map_.begin(); + it != map_.end(); ++it) + { + tags.insert(it->first); + } + } + + + static uint16_t ReadUnsignedInteger16(const char* dicom) + { + return le16toh(*reinterpret_cast<const uint16_t*>(dicom)); + } + + + static uint32_t ReadUnsignedInteger32(const char* dicom) + { + return le32toh(*reinterpret_cast<const uint32_t*>(dicom)); + } + + + static bool ValidateTag(const ValueRepresentation& vr, + const std::string& value) + { + switch (vr) + { + case ValueRepresentation_ApplicationEntity: + return value.size() <= 16; + + case ValueRepresentation_AgeString: + return (value.size() == 4 && + isdigit(value[0]) && + isdigit(value[1]) && + isdigit(value[2]) && + (value[3] == 'D' || value[3] == 'W' || value[3] == 'M' || value[3] == 'Y')); + + case ValueRepresentation_AttributeTag: + return value.size() == 4; + + case ValueRepresentation_CodeString: + return value.size() <= 16; + + case ValueRepresentation_Date: + return value.size() <= 18; + + case ValueRepresentation_DecimalString: + return value.size() <= 16; + + case ValueRepresentation_DateTime: + return value.size() <= 54; + + case ValueRepresentation_FloatingPointSingle: + return value.size() == 4; + + case ValueRepresentation_FloatingPointDouble: + return value.size() == 8; + + case ValueRepresentation_IntegerString: + return value.size() <= 12; + + case ValueRepresentation_LongString: + return value.size() <= 64; + + case ValueRepresentation_LongText: + return value.size() <= 10240; + + case ValueRepresentation_OtherByte: + return true; + + case ValueRepresentation_OtherDouble: + return value.size() <= (static_cast<uint64_t>(1) << 32) - 8; + + case ValueRepresentation_OtherFloat: + return value.size() <= (static_cast<uint64_t>(1) << 32) - 4; + + case ValueRepresentation_OtherLong: + return true; + + case ValueRepresentation_OtherWord: + return true; + + case ValueRepresentation_PersonName: + return true; + + case ValueRepresentation_ShortString: + return value.size() <= 16; + + case ValueRepresentation_SignedLong: + return value.size() == 4; + + case ValueRepresentation_Sequence: + return true; + + case ValueRepresentation_SignedShort: + return value.size() == 2; + + case ValueRepresentation_ShortText: + return value.size() <= 1024; + + case ValueRepresentation_Time: + return value.size() <= 28; + + case ValueRepresentation_UnlimitedCharacters: + return value.size() <= (static_cast<uint64_t>(1) << 32) - 2; + + case ValueRepresentation_UniqueIdentifier: + return value.size() <= 64; + + case ValueRepresentation_UnsignedLong: + return value.size() == 4; + + case ValueRepresentation_Unknown: + return true; + + case ValueRepresentation_UniversalResource: + return value.size() <= (static_cast<uint64_t>(1) << 32) - 2; + + case ValueRepresentation_UnsignedShort: + return value.size() == 2; + + case ValueRepresentation_UnlimitedText: + return value.size() <= (static_cast<uint64_t>(1) << 32) - 2; + + default: + // Assume unsupported tags are OK + return true; + } + } + + + static void RemoveTagPadding(std::string& value, + const ValueRepresentation& vr) + { + /** + * Remove padding from character strings, if need be. For the time + * being, only the UI VR is supported. + * http://dicom.nema.org/medical/dicom/current/output/chtml/part05/sect_6.2.html + **/ + + switch (vr) + { + case ValueRepresentation_UniqueIdentifier: + { + /** + * "Values with a VR of UI shall be padded with a single + * trailing NULL (00H) character when necessary to achieve even + * length." + **/ + + if (!value.empty() && + value[value.size() - 1] == '\0') + { + value.resize(value.size() - 1); + } + + break; + } + + /** + * TODO implement other VR + **/ + + default: + // No padding is applicable to this VR + break; + } + } + + + static bool ReadNextTag(DicomTag& tag, + ValueRepresentation& vr, + std::string& value, + const char* dicom, + size_t size, + size_t& position) + { + /** + * http://dicom.nema.org/medical/dicom/current/output/chtml/part05/chapter_7.html#sect_7.1.2 + * This function reads a data element with Explicit VR encoded using Little-Endian. + **/ + + if (position + 6 > size) + { + return false; + } + + tag = DicomTag(ReadUnsignedInteger16(dicom + position), + ReadUnsignedInteger16(dicom + position + 2)); + + vr = StringToValueRepresentation(std::string(dicom + position + 4, 2), true); + if (vr == ValueRepresentation_NotSupported) + { + return false; + } + + if (vr == ValueRepresentation_OtherByte || + vr == ValueRepresentation_OtherDouble || + vr == ValueRepresentation_OtherFloat || + vr == ValueRepresentation_OtherLong || + vr == ValueRepresentation_OtherWord || + vr == ValueRepresentation_Sequence || + vr == ValueRepresentation_UnlimitedCharacters || + vr == ValueRepresentation_UniversalResource || + vr == ValueRepresentation_UnlimitedText || + vr == ValueRepresentation_Unknown) // Note that "UN" should never appear in the Meta Information + { + if (position + 12 > size) + { + return false; + } + + uint32_t length = ReadUnsignedInteger32(dicom + position + 8); + + if (position + 12 + length > size) + { + return false; + } + + value.assign(dicom + position + 12, length); + position += (12 + length); + } + else + { + if (position + 8 > size) + { + return false; + } + + uint16_t length = ReadUnsignedInteger16(dicom + position + 6); + + if (position + 8 + length > size) + { + return false; + } + + value.assign(dicom + position + 8, length); + position += (8 + length); + } + + if (!ValidateTag(vr, value)) + { + return false; + } + + RemoveTagPadding(value, vr); + + return true; + } + + + bool DicomMap::ParseDicomMetaInformation(DicomMap& result, + const char* dicom, + size_t size) + { + /** + * http://dicom.nema.org/medical/dicom/current/output/chtml/part10/chapter_7.html + * According to Table 7.1-1, besides the "DICM" DICOM prefix, the + * file preamble (i.e. dicom[0..127]) should not be taken into + * account to determine whether the file is or is not a DICOM file. + **/ + + if (size < 132 || + dicom[128] != 'D' || + dicom[129] != 'I' || + dicom[130] != 'C' || + dicom[131] != 'M') + { + return false; + } + + + /** + * The DICOM File Meta Information must be encoded using the + * Explicit VR Little Endian Transfer Syntax + * (UID=1.2.840.10008.1.2.1). + **/ + + result.Clear(); + + // First, we read the "File Meta Information Group Length" tag + // (0002,0000) to know where to stop reading the meta header + size_t position = 132; + + DicomTag tag(0x0000, 0x0000); // Dummy initialization + ValueRepresentation vr; + std::string value; + if (!ReadNextTag(tag, vr, value, dicom, size, position) || + tag.GetGroup() != 0x0002 || + tag.GetElement() != 0x0000 || + vr != ValueRepresentation_UnsignedLong || + value.size() != 4) + { + return false; + } + + size_t stopPosition = position + ReadUnsignedInteger32(value.c_str()); + if (stopPosition > size) + { + return false; + } + + while (position < stopPosition) + { + if (ReadNextTag(tag, vr, value, dicom, size, position)) + { + result.SetValue(tag, value, IsBinaryValueRepresentation(vr)); + } + else + { + return false; + } + } + + return true; + } + + + static std::string ValueAsString(const DicomMap& summary, + const DicomTag& tag) + { + const DicomValue& value = summary.GetValue(tag); + if (value.IsNull()) + { + return "(null)"; + } + else + { + return value.GetContent(); + } + } + + + void DicomMap::LogMissingTagsForStore() const + { + std::string s, t; + + if (HasTag(DICOM_TAG_PATIENT_ID)) + { + if (t.size() > 0) + t += ", "; + t += "PatientID=" + ValueAsString(*this, DICOM_TAG_PATIENT_ID); + } + else + { + if (s.size() > 0) + s += ", "; + s += "PatientID"; + } + + if (HasTag(DICOM_TAG_STUDY_INSTANCE_UID)) + { + if (t.size() > 0) + t += ", "; + t += "StudyInstanceUID=" + ValueAsString(*this, DICOM_TAG_STUDY_INSTANCE_UID); + } + else + { + if (s.size() > 0) + s += ", "; + s += "StudyInstanceUID"; + } + + if (HasTag(DICOM_TAG_SERIES_INSTANCE_UID)) + { + if (t.size() > 0) + t += ", "; + t += "SeriesInstanceUID=" + ValueAsString(*this, DICOM_TAG_SERIES_INSTANCE_UID); + } + else + { + if (s.size() > 0) + s += ", "; + s += "SeriesInstanceUID"; + } + + if (HasTag(DICOM_TAG_SOP_INSTANCE_UID)) + { + if (t.size() > 0) + t += ", "; + t += "SOPInstanceUID=" + ValueAsString(*this, DICOM_TAG_SOP_INSTANCE_UID); + } + else + { + if (s.size() > 0) + s += ", "; + s += "SOPInstanceUID"; + } + + if (t.size() == 0) + { + LOG(ERROR) << "Store has failed because all the required tags (" << s << ") are missing (is it a DICOMDIR file?)"; + } + else + { + LOG(ERROR) << "Store has failed because required tags (" << s << ") are missing for the following instance: " << t; + } + } + + + bool DicomMap::CopyToString(std::string& result, + const DicomTag& tag, + bool allowBinary) const + { + const DicomValue* value = TestAndGetValue(tag); + + if (value == NULL) + { + return false; + } + else + { + return value->CopyToString(result, allowBinary); + } + } + + bool DicomMap::ParseInteger32(int32_t& result, + const DicomTag& tag) const + { + const DicomValue* value = TestAndGetValue(tag); + + if (value == NULL) + { + return false; + } + else + { + return value->ParseInteger32(result); + } + } + + bool DicomMap::ParseInteger64(int64_t& result, + const DicomTag& tag) const + { + const DicomValue* value = TestAndGetValue(tag); + + if (value == NULL) + { + return false; + } + else + { + return value->ParseInteger64(result); + } + } + + bool DicomMap::ParseUnsignedInteger32(uint32_t& result, + const DicomTag& tag) const + { + const DicomValue* value = TestAndGetValue(tag); + + if (value == NULL) + { + return false; + } + else + { + return value->ParseUnsignedInteger32(result); + } + } + + bool DicomMap::ParseUnsignedInteger64(uint64_t& result, + const DicomTag& tag) const + { + const DicomValue* value = TestAndGetValue(tag); + + if (value == NULL) + { + return false; + } + else + { + return value->ParseUnsignedInteger64(result); + } + } + + bool DicomMap::ParseFloat(float& result, + const DicomTag& tag) const + { + const DicomValue* value = TestAndGetValue(tag); + + if (value == NULL) + { + return false; + } + else + { + return value->ParseFloat(result); + } + } + + bool DicomMap::ParseDouble(double& result, + const DicomTag& tag) const + { + const DicomValue* value = TestAndGetValue(tag); + + if (value == NULL) + { + return false; + } + else + { + return value->ParseDouble(result); + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomMap.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,209 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "DicomTag.h" +#include "DicomValue.h" +#include "../Enumerations.h" + +#include <set> +#include <map> +#include <json/json.h> + +namespace Orthanc +{ + class DicomMap : public boost::noncopyable + { + private: + friend class DicomArray; + friend class FromDcmtkBridge; + friend class ParsedDicomFile; + + typedef std::map<DicomTag, DicomValue*> Map; + + Map map_; + + // Warning: This takes the ownership of "value" + void SetValue(uint16_t group, + uint16_t element, + DicomValue* value); + + void SetValue(DicomTag tag, + DicomValue* value); + + void ExtractTags(DicomMap& source, + const DicomTag* tags, + size_t count) const; + + static void GetMainDicomTagsInternal(std::set<DicomTag>& result, ResourceType level); + + public: + DicomMap() + { + } + + ~DicomMap() + { + Clear(); + } + + size_t GetSize() const + { + return map_.size(); + } + + DicomMap* Clone() const; + + void Assign(const DicomMap& other); + + void Clear(); + + void SetValue(uint16_t group, + uint16_t element, + const DicomValue& value) + { + SetValue(group, element, value.Clone()); + } + + void SetValue(const DicomTag& tag, + const DicomValue& value) + { + SetValue(tag, value.Clone()); + } + + void SetValue(const DicomTag& tag, + const std::string& str, + bool isBinary) + { + SetValue(tag, new DicomValue(str, isBinary)); + } + + void SetValue(uint16_t group, + uint16_t element, + const std::string& str, + bool isBinary) + { + SetValue(group, element, new DicomValue(str, isBinary)); + } + + bool HasTag(uint16_t group, uint16_t element) const + { + return HasTag(DicomTag(group, element)); + } + + bool HasTag(const DicomTag& tag) const + { + return map_.find(tag) != map_.end(); + } + + const DicomValue& GetValue(uint16_t group, uint16_t element) const + { + return GetValue(DicomTag(group, element)); + } + + const DicomValue& GetValue(const DicomTag& tag) const; + + // DO NOT delete the returned value! + const DicomValue* TestAndGetValue(uint16_t group, uint16_t element) const + { + return TestAndGetValue(DicomTag(group, element)); + } + + // DO NOT delete the returned value! + const DicomValue* TestAndGetValue(const DicomTag& tag) const; + + void Remove(const DicomTag& tag); + + void ExtractPatientInformation(DicomMap& result) const; + + void ExtractStudyInformation(DicomMap& result) const; + + void ExtractSeriesInformation(DicomMap& result) const; + + void ExtractInstanceInformation(DicomMap& result) const; + + static void SetupFindPatientTemplate(DicomMap& result); + + static void SetupFindStudyTemplate(DicomMap& result); + + static void SetupFindSeriesTemplate(DicomMap& result); + + static void SetupFindInstanceTemplate(DicomMap& result); + + void CopyTagIfExists(const DicomMap& source, + const DicomTag& tag); + + static bool IsMainDicomTag(const DicomTag& tag, ResourceType level); + + static bool IsMainDicomTag(const DicomTag& tag); + + static void GetMainDicomTags(std::set<DicomTag>& result, ResourceType level); + + static void GetMainDicomTags(std::set<DicomTag>& result); + + void GetTags(std::set<DicomTag>& tags) const; + + static void LoadMainDicomTags(const DicomTag*& tags, + size_t& size, + ResourceType level); + + static bool ParseDicomMetaInformation(DicomMap& result, + const char* dicom, + size_t size); + + void LogMissingTagsForStore() const; + + bool CopyToString(std::string& result, + const DicomTag& tag, + bool allowBinary) const; + + bool ParseInteger32(int32_t& result, + const DicomTag& tag) const; + + bool ParseInteger64(int64_t& result, + const DicomTag& tag) const; + + bool ParseUnsignedInteger32(uint32_t& result, + const DicomTag& tag) const; + + bool ParseUnsignedInteger64(uint64_t& result, + const DicomTag& tag) const; + + bool ParseFloat(float& result, + const DicomTag& tag) const; + + bool ParseDouble(double& result, + const DicomTag& tag) const; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomTag.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,253 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "DicomTag.h" + +#include "../OrthancException.h" + +#include <iostream> +#include <iomanip> +#include <stdio.h> + +namespace Orthanc +{ + bool DicomTag::operator< (const DicomTag& other) const + { + if (group_ < other.group_) + return true; + + if (group_ > other.group_) + return false; + + return element_ < other.element_; + } + + + std::ostream& operator<< (std::ostream& o, const DicomTag& tag) + { + using namespace std; + ios_base::fmtflags state = o.flags(); + o.flags(ios::right | ios::hex); + o << "(" << setfill('0') << setw(4) << tag.GetGroup() + << "," << setw(4) << tag.GetElement() << ")"; + o.flags(state); + return o; + } + + + std::string DicomTag::Format() const + { + char b[16]; + sprintf(b, "%04x,%04x", group_, element_); + return std::string(b); + } + + + const char* DicomTag::GetMainTagsName() const + { + if (*this == DICOM_TAG_ACCESSION_NUMBER) + return "AccessionNumber"; + + if (*this == DICOM_TAG_SOP_INSTANCE_UID) + return "SOPInstanceUID"; + + if (*this == DICOM_TAG_PATIENT_ID) + return "PatientID"; + + if (*this == DICOM_TAG_SERIES_INSTANCE_UID) + return "SeriesInstanceUID"; + + if (*this == DICOM_TAG_STUDY_INSTANCE_UID) + return "StudyInstanceUID"; + + if (*this == DICOM_TAG_PIXEL_DATA) + return "PixelData"; + + if (*this == DICOM_TAG_IMAGE_INDEX) + return "ImageIndex"; + + if (*this == DICOM_TAG_INSTANCE_NUMBER) + return "InstanceNumber"; + + if (*this == DICOM_TAG_NUMBER_OF_SLICES) + return "NumberOfSlices"; + + if (*this == DICOM_TAG_NUMBER_OF_FRAMES) + return "NumberOfFrames"; + + if (*this == DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES) + return "CardiacNumberOfImages"; + + if (*this == DICOM_TAG_IMAGES_IN_ACQUISITION) + return "ImagesInAcquisition"; + + if (*this == DICOM_TAG_PATIENT_NAME) + return "PatientName"; + + if (*this == DICOM_TAG_IMAGE_POSITION_PATIENT) + return "ImagePositionPatient"; + + if (*this == DICOM_TAG_IMAGE_ORIENTATION_PATIENT) + return "ImageOrientationPatient"; + + return ""; + } + + + void DicomTag::AddTagsForModule(std::set<DicomTag>& target, + DicomModule module) + { + // REFERENCE: 11_03pu.pdf, DICOM PS 3.3 2011 - Information Object Definitions + + switch (module) + { + case DicomModule_Patient: + // This is Table C.7-1 "Patient Module Attributes" (p. 373) + target.insert(DicomTag(0x0010, 0x0010)); // Patient's name + target.insert(DicomTag(0x0010, 0x0020)); // Patient ID + target.insert(DicomTag(0x0010, 0x0030)); // Patient's birth date + target.insert(DicomTag(0x0010, 0x0040)); // Patient's sex + target.insert(DicomTag(0x0008, 0x1120)); // Referenced patient sequence + target.insert(DicomTag(0x0010, 0x0032)); // Patient's birth time + target.insert(DicomTag(0x0010, 0x1000)); // Other patient IDs + target.insert(DicomTag(0x0010, 0x1002)); // Other patient IDs sequence + target.insert(DicomTag(0x0010, 0x1001)); // Other patient names + target.insert(DicomTag(0x0010, 0x2160)); // Ethnic group + target.insert(DicomTag(0x0010, 0x4000)); // Patient comments + target.insert(DicomTag(0x0010, 0x2201)); // Patient species description + target.insert(DicomTag(0x0010, 0x2202)); // Patient species code sequence + target.insert(DicomTag(0x0010, 0x2292)); // Patient breed description + target.insert(DicomTag(0x0010, 0x2293)); // Patient breed code sequence + target.insert(DicomTag(0x0010, 0x2294)); // Breed registration sequence + target.insert(DicomTag(0x0010, 0x2297)); // Responsible person + target.insert(DicomTag(0x0010, 0x2298)); // Responsible person role + target.insert(DicomTag(0x0010, 0x2299)); // Responsible organization + target.insert(DicomTag(0x0012, 0x0062)); // Patient identity removed + target.insert(DicomTag(0x0012, 0x0063)); // De-identification method + target.insert(DicomTag(0x0012, 0x0064)); // De-identification method code sequence + + // Table 10-18 ISSUER OF PATIENT ID MACRO (p. 112) + target.insert(DicomTag(0x0010, 0x0021)); // Issuer of Patient ID + target.insert(DicomTag(0x0010, 0x0024)); // Issuer of Patient ID qualifiers sequence + break; + + case DicomModule_Study: + // This is Table C.7-3 "General Study Module Attributes" (p. 378) + target.insert(DicomTag(0x0020, 0x000d)); // Study instance UID + target.insert(DicomTag(0x0008, 0x0020)); // Study date + target.insert(DicomTag(0x0008, 0x0030)); // Study time + target.insert(DicomTag(0x0008, 0x0090)); // Referring physician's name + target.insert(DicomTag(0x0008, 0x0096)); // Referring physician identification sequence + target.insert(DicomTag(0x0020, 0x0010)); // Study ID + target.insert(DicomTag(0x0008, 0x0050)); // Accession number + target.insert(DicomTag(0x0008, 0x0051)); // Issuer of accession number sequence + target.insert(DicomTag(0x0008, 0x1030)); // Study description + target.insert(DicomTag(0x0008, 0x1048)); // Physician(s) of record + target.insert(DicomTag(0x0008, 0x1049)); // Physician(s) of record identification sequence + target.insert(DicomTag(0x0008, 0x1060)); // Name of physician(s) reading study + target.insert(DicomTag(0x0008, 0x1062)); // Physician(s) reading study identification sequence + target.insert(DicomTag(0x0032, 0x1034)); // Requesting service code sequence + target.insert(DicomTag(0x0008, 0x1110)); // Referenced study sequence + target.insert(DicomTag(0x0008, 0x1032)); // Procedure code sequence + target.insert(DicomTag(0x0040, 0x1012)); // Reason for performed procedure code sequence + break; + + case DicomModule_Series: + // This is Table C.7-5 "General Series Module Attributes" (p. 385) + target.insert(DicomTag(0x0008, 0x0060)); // Modality + target.insert(DicomTag(0x0020, 0x000e)); // Series Instance UID + target.insert(DicomTag(0x0020, 0x0011)); // Series Number + target.insert(DicomTag(0x0020, 0x0060)); // Laterality + target.insert(DicomTag(0x0008, 0x0021)); // Series Date + target.insert(DicomTag(0x0008, 0x0031)); // Series Time + target.insert(DicomTag(0x0008, 0x1050)); // Performing Physicians’ Name + target.insert(DicomTag(0x0008, 0x1052)); // Performing Physician Identification Sequence + target.insert(DicomTag(0x0018, 0x1030)); // Protocol Name + target.insert(DicomTag(0x0008, 0x103e)); // Series Description + target.insert(DicomTag(0x0008, 0x103f)); // Series Description Code Sequence + target.insert(DicomTag(0x0008, 0x1070)); // Operators' Name + target.insert(DicomTag(0x0008, 0x1072)); // Operator Identification Sequence + target.insert(DicomTag(0x0008, 0x1111)); // Referenced Performed Procedure Step Sequence + target.insert(DicomTag(0x0008, 0x1250)); // Related Series Sequence + target.insert(DicomTag(0x0018, 0x0015)); // Body Part Examined + target.insert(DicomTag(0x0018, 0x5100)); // Patient Position + target.insert(DicomTag(0x0028, 0x0108)); // Smallest Pixel Value in Series + target.insert(DicomTag(0x0029, 0x0109)); // Largest Pixel Value in Series + target.insert(DicomTag(0x0040, 0x0275)); // Request Attributes Sequence + target.insert(DicomTag(0x0010, 0x2210)); // Anatomical Orientation Type + + // Table 10-16 PERFORMED PROCEDURE STEP SUMMARY MACRO ATTRIBUTES + target.insert(DicomTag(0x0040, 0x0253)); // Performed Procedure Step ID + target.insert(DicomTag(0x0040, 0x0244)); // Performed Procedure Step Start Date + target.insert(DicomTag(0x0040, 0x0245)); // Performed Procedure Step Start Time + target.insert(DicomTag(0x0040, 0x0254)); // Performed Procedure Step Description + target.insert(DicomTag(0x0040, 0x0260)); // Performed Protocol Code Sequence + target.insert(DicomTag(0x0040, 0x0280)); // Comments on the Performed Procedure Step + break; + + case DicomModule_Instance: + // This is Table C.12-1 "SOP Common Module Attributes" (p. 1207) + target.insert(DicomTag(0x0008, 0x0016)); // SOP Class UID + target.insert(DicomTag(0x0008, 0x0018)); // SOP Instance UID + target.insert(DicomTag(0x0008, 0x0005)); // Specific Character Set + target.insert(DicomTag(0x0008, 0x0012)); // Instance Creation Date + target.insert(DicomTag(0x0008, 0x0013)); // Instance Creation Time + target.insert(DicomTag(0x0008, 0x0014)); // Instance Creator UID + target.insert(DicomTag(0x0008, 0x001a)); // Related General SOP Class UID + target.insert(DicomTag(0x0008, 0x001b)); // Original Specialized SOP Class UID + target.insert(DicomTag(0x0008, 0x0110)); // Coding Scheme Identification Sequence + target.insert(DicomTag(0x0008, 0x0201)); // Timezone Offset From UTC + target.insert(DicomTag(0x0018, 0xa001)); // Contributing Equipment Sequence + target.insert(DicomTag(0x0020, 0x0013)); // Instance Number + target.insert(DicomTag(0x0100, 0x0410)); // SOP Instance Status + target.insert(DicomTag(0x0100, 0x0420)); // SOP Authorization DateTime + target.insert(DicomTag(0x0100, 0x0424)); // SOP Authorization Comment + target.insert(DicomTag(0x0100, 0x0426)); // Authorization Equipment Certification Number + target.insert(DicomTag(0x0400, 0x0500)); // Encrypted Attributes Sequence + target.insert(DicomTag(0x0400, 0x0561)); // Original Attributes Sequence + target.insert(DicomTag(0x0040, 0xa390)); // HL7 Structured Document Reference Sequence + target.insert(DicomTag(0x0028, 0x0303)); // Longitudinal Temporal Information Modified + + // Table C.12-6 "DIGITAL SIGNATURES MACRO ATTRIBUTES" (p. 1216) + target.insert(DicomTag(0x4ffe, 0x0001)); // MAC Parameters sequence + target.insert(DicomTag(0xfffa, 0xfffa)); // Digital signatures sequence + break; + + // TODO IMAGE MODULE? + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomTag.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,196 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <string> +#include <set> +#include <stdint.h> + +#include "../Enumerations.h" + +namespace Orthanc +{ + class DicomTag + { + // This must stay a POD (plain old data structure) + + private: + uint16_t group_; + uint16_t element_; + + public: + DicomTag(uint16_t group, + uint16_t element) : + group_(group), + element_(element) + { + } + + uint16_t GetGroup() const + { + return group_; + } + + uint16_t GetElement() const + { + return element_; + } + + bool IsPrivate() const + { + return group_ % 2 == 1; + } + + const char* GetMainTagsName() const; + + bool operator< (const DicomTag& other) const; + + bool operator== (const DicomTag& other) const + { + return group_ == other.group_ && element_ == other.element_; + } + + bool operator!= (const DicomTag& other) const + { + return !(*this == other); + } + + std::string Format() const; + + friend std::ostream& operator<< (std::ostream& o, const DicomTag& tag); + + static void AddTagsForModule(std::set<DicomTag>& target, + DicomModule module); + }; + + // Aliases for the most useful tags + static const DicomTag DICOM_TAG_ACCESSION_NUMBER(0x0008, 0x0050); + static const DicomTag DICOM_TAG_SOP_INSTANCE_UID(0x0008, 0x0018); + static const DicomTag DICOM_TAG_PATIENT_ID(0x0010, 0x0020); + static const DicomTag DICOM_TAG_SERIES_INSTANCE_UID(0x0020, 0x000e); + static const DicomTag DICOM_TAG_STUDY_INSTANCE_UID(0x0020, 0x000d); + static const DicomTag DICOM_TAG_PIXEL_DATA(0x7fe0, 0x0010); + static const DicomTag DICOM_TAG_TRANSFER_SYNTAX_UID(0x0002, 0x0010); + + static const DicomTag DICOM_TAG_IMAGE_INDEX(0x0054, 0x1330); + static const DicomTag DICOM_TAG_INSTANCE_NUMBER(0x0020, 0x0013); + + static const DicomTag DICOM_TAG_NUMBER_OF_SLICES(0x0054, 0x0081); + static const DicomTag DICOM_TAG_NUMBER_OF_TIME_SLICES(0x0054, 0x0101); + static const DicomTag DICOM_TAG_NUMBER_OF_FRAMES(0x0028, 0x0008); + static const DicomTag DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES(0x0018, 0x1090); + static const DicomTag DICOM_TAG_IMAGES_IN_ACQUISITION(0x0020, 0x1002); + static const DicomTag DICOM_TAG_PATIENT_NAME(0x0010, 0x0010); + static const DicomTag DICOM_TAG_ENCAPSULATED_DOCUMENT(0x0042, 0x0011); + + static const DicomTag DICOM_TAG_STUDY_DESCRIPTION(0x0008, 0x1030); + static const DicomTag DICOM_TAG_SERIES_DESCRIPTION(0x0008, 0x103e); + static const DicomTag DICOM_TAG_MODALITY(0x0008, 0x0060); + + // The following is used for "modify/anonymize" operations + static const DicomTag DICOM_TAG_SOP_CLASS_UID(0x0008, 0x0016); + static const DicomTag DICOM_TAG_MEDIA_STORAGE_SOP_CLASS_UID(0x0002, 0x0002); + static const DicomTag DICOM_TAG_MEDIA_STORAGE_SOP_INSTANCE_UID(0x0002, 0x0003); + static const DicomTag DICOM_TAG_DEIDENTIFICATION_METHOD(0x0012, 0x0063); + + // DICOM tags used for fMRI (thanks to Will Ryder) + static const DicomTag DICOM_TAG_NUMBER_OF_TEMPORAL_POSITIONS(0x0020, 0x0105); + static const DicomTag DICOM_TAG_TEMPORAL_POSITION_IDENTIFIER(0x0020, 0x0100); + + // Tags for C-FIND and C-MOVE + static const DicomTag DICOM_TAG_MESSAGE_ID(0x0000, 0x0110); + static const DicomTag DICOM_TAG_SPECIFIC_CHARACTER_SET(0x0008, 0x0005); + static const DicomTag DICOM_TAG_QUERY_RETRIEVE_LEVEL(0x0008, 0x0052); + static const DicomTag DICOM_TAG_MODALITIES_IN_STUDY(0x0008, 0x0061); + + // Tags for images + static const DicomTag DICOM_TAG_COLUMNS(0x0028, 0x0011); + static const DicomTag DICOM_TAG_ROWS(0x0028, 0x0010); + static const DicomTag DICOM_TAG_SAMPLES_PER_PIXEL(0x0028, 0x0002); + static const DicomTag DICOM_TAG_BITS_ALLOCATED(0x0028, 0x0100); + static const DicomTag DICOM_TAG_BITS_STORED(0x0028, 0x0101); + static const DicomTag DICOM_TAG_HIGH_BIT(0x0028, 0x0102); + static const DicomTag DICOM_TAG_PIXEL_REPRESENTATION(0x0028, 0x0103); + static const DicomTag DICOM_TAG_PLANAR_CONFIGURATION(0x0028, 0x0006); + static const DicomTag DICOM_TAG_PHOTOMETRIC_INTERPRETATION(0x0028, 0x0004); + static const DicomTag DICOM_TAG_IMAGE_ORIENTATION_PATIENT(0x0020, 0x0037); + static const DicomTag DICOM_TAG_IMAGE_POSITION_PATIENT(0x0020, 0x0032); + + // Tags related to date and time + static const DicomTag DICOM_TAG_ACQUISITION_DATE(0x0008, 0x0022); + static const DicomTag DICOM_TAG_ACQUISITION_TIME(0x0008, 0x0032); + static const DicomTag DICOM_TAG_CONTENT_DATE(0x0008, 0x0023); + static const DicomTag DICOM_TAG_CONTENT_TIME(0x0008, 0x0033); + static const DicomTag DICOM_TAG_INSTANCE_CREATION_DATE(0x0008, 0x0012); + static const DicomTag DICOM_TAG_INSTANCE_CREATION_TIME(0x0008, 0x0013); + static const DicomTag DICOM_TAG_PATIENT_BIRTH_DATE(0x0010, 0x0030); + static const DicomTag DICOM_TAG_PATIENT_BIRTH_TIME(0x0010, 0x0032); + static const DicomTag DICOM_TAG_SERIES_DATE(0x0008, 0x0021); + static const DicomTag DICOM_TAG_SERIES_TIME(0x0008, 0x0031); + static const DicomTag DICOM_TAG_STUDY_DATE(0x0008, 0x0020); + static const DicomTag DICOM_TAG_STUDY_TIME(0x0008, 0x0030); + + // Various tags + static const DicomTag DICOM_TAG_SERIES_TYPE(0x0054, 0x1000); + static const DicomTag DICOM_TAG_REQUESTED_PROCEDURE_DESCRIPTION(0x0032, 0x1060); + static const DicomTag DICOM_TAG_INSTITUTION_NAME(0x0008, 0x0080); + static const DicomTag DICOM_TAG_REQUESTING_PHYSICIAN(0x0032, 0x1032); + static const DicomTag DICOM_TAG_REFERRING_PHYSICIAN_NAME(0x0008, 0x0090); + static const DicomTag DICOM_TAG_OPERATOR_NAME(0x0008, 0x1070); + static const DicomTag DICOM_TAG_PERFORMED_PROCEDURE_STEP_DESCRIPTION(0x0040, 0x0254); + static const DicomTag DICOM_TAG_IMAGE_COMMENTS(0x0020, 0x4000); + static const DicomTag DICOM_TAG_ACQUISITION_DEVICE_PROCESSING_DESCRIPTION(0x0018, 0x1400); + static const DicomTag DICOM_TAG_CONTRAST_BOLUS_AGENT(0x0018, 0x0010); + + // Tags used within the Stone of Orthanc + static const DicomTag DICOM_TAG_FRAME_INCREMENT_POINTER(0x0028, 0x0009); + static const DicomTag DICOM_TAG_GRID_FRAME_OFFSET_VECTOR(0x3004, 0x000c); + static const DicomTag DICOM_TAG_PIXEL_SPACING(0x0028, 0x0030); + static const DicomTag DICOM_TAG_RESCALE_INTERCEPT(0x0028, 0x1052); + static const DicomTag DICOM_TAG_RESCALE_SLOPE(0x0028, 0x1053); + static const DicomTag DICOM_TAG_SLICE_THICKNESS(0x0018, 0x0050); + static const DicomTag DICOM_TAG_WINDOW_CENTER(0x0028, 0x1050); + static const DicomTag DICOM_TAG_WINDOW_WIDTH(0x0028, 0x1051); + static const DicomTag DICOM_TAG_DOSE_GRID_SCALING(0x3004, 0x000e); + + // Counting patients, studies and series + // https://www.medicalconnections.co.uk/kb/Counting_Studies_Series_and_Instances + static const DicomTag DICOM_TAG_NUMBER_OF_PATIENT_RELATED_STUDIES(0x0020, 0x1200); + static const DicomTag DICOM_TAG_NUMBER_OF_PATIENT_RELATED_SERIES(0x0020, 0x1202); + static const DicomTag DICOM_TAG_NUMBER_OF_PATIENT_RELATED_INSTANCES(0x0020, 0x1204); + static const DicomTag DICOM_TAG_NUMBER_OF_STUDY_RELATED_SERIES(0x0020, 0x1206); + static const DicomTag DICOM_TAG_NUMBER_OF_STUDY_RELATED_INSTANCES(0x0020, 0x1208); + static const DicomTag DICOM_TAG_NUMBER_OF_SERIES_RELATED_INSTANCES(0x0020, 0x1209); + static const DicomTag DICOM_TAG_SOP_CLASSES_IN_STUDY(0x0008, 0x0062); +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomValue.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,196 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "DicomValue.h" + +#include "../OrthancException.h" +#include "../Toolbox.h" + +#include <boost/lexical_cast.hpp> + +namespace Orthanc +{ + DicomValue::DicomValue(const DicomValue& other) : + type_(other.type_), + content_(other.content_) + { + } + + + DicomValue::DicomValue(const std::string& content, + bool isBinary) : + type_(isBinary ? Type_Binary : Type_String), + content_(content) + { + } + + + DicomValue::DicomValue(const char* data, + size_t size, + bool isBinary) : + type_(isBinary ? Type_Binary : Type_String) + { + content_.assign(data, size); + } + + + const std::string& DicomValue::GetContent() const + { + if (type_ == Type_Null) + { + throw OrthancException(ErrorCode_BadParameterType); + } + else + { + return content_; + } + } + + + DicomValue* DicomValue::Clone() const + { + return new DicomValue(*this); + } + + +#if ORTHANC_ENABLE_BASE64 == 1 + void DicomValue::FormatDataUriScheme(std::string& target, + const std::string& mime) const + { + Toolbox::EncodeBase64(target, GetContent()); + target.insert(0, "data:" + mime + ";base64,"); + } +#endif + + + template <typename T, + bool allowSigned> + static bool ParseValue(T& result, + const DicomValue& source) + { + if (source.IsBinary() || + source.IsNull()) + { + return false; + } + + try + { + std::string value = Toolbox::StripSpaces(source.GetContent()); + if (value.empty()) + { + return false; + } + + if (!allowSigned && + value[0] == '-') + { + return false; + } + + result = boost::lexical_cast<T>(value); + return true; + } + catch (boost::bad_lexical_cast&) + { + return false; + } + } + + bool DicomValue::ParseInteger32(int32_t& result) const + { + int64_t tmp; + if (ParseValue<int64_t, true>(tmp, *this)) + { + result = static_cast<int32_t>(tmp); + return (tmp == static_cast<int64_t>(result)); // Check no overflow occurs + } + else + { + return false; + } + } + + bool DicomValue::ParseInteger64(int64_t& result) const + { + return ParseValue<int64_t, true>(result, *this); + } + + bool DicomValue::ParseUnsignedInteger32(uint32_t& result) const + { + uint64_t tmp; + if (ParseValue<uint64_t, false>(tmp, *this)) + { + result = static_cast<uint32_t>(tmp); + return (tmp == static_cast<uint64_t>(result)); // Check no overflow occurs + } + else + { + return false; + } + } + + bool DicomValue::ParseUnsignedInteger64(uint64_t& result) const + { + return ParseValue<uint64_t, false>(result, *this); + } + + bool DicomValue::ParseFloat(float& result) const + { + return ParseValue<float, true>(result, *this); + } + + bool DicomValue::ParseDouble(double& result) const + { + return ParseValue<double, true>(result, *this); + } + + bool DicomValue::CopyToString(std::string& result, + bool allowBinary) const + { + if (IsNull()) + { + return false; + } + else if (IsBinary() && !allowBinary) + { + return false; + } + else + { + result.assign(content_); + return true; + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/DicomFormat/DicomValue.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,113 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <stdint.h> +#include <string> +#include <boost/noncopyable.hpp> + +#if !defined(ORTHANC_ENABLE_BASE64) +# error The macro ORTHANC_ENABLE_BASE64 must be defined +#endif + + +namespace Orthanc +{ + class DicomValue : public boost::noncopyable + { + private: + enum Type + { + Type_Null, + Type_String, + Type_Binary + }; + + Type type_; + std::string content_; + + DicomValue(const DicomValue& other); + + public: + DicomValue() : type_(Type_Null) + { + } + + DicomValue(const std::string& content, + bool isBinary); + + DicomValue(const char* data, + size_t size, + bool isBinary); + + const std::string& GetContent() const; + + bool IsNull() const + { + return type_ == Type_Null; + } + + bool IsBinary() const + { + return type_ == Type_Binary; + } + + DicomValue* Clone() const; + +#if ORTHANC_ENABLE_BASE64 == 1 + void FormatDataUriScheme(std::string& target, + const std::string& mime) const; + + void FormatDataUriScheme(std::string& target) const + { + FormatDataUriScheme(target, "application/octet-stream"); + } +#endif + + bool CopyToString(std::string& result, + bool allowBinary) const; + + bool ParseInteger32(int32_t& result) const; + + bool ParseInteger64(int64_t& result) const; + + bool ParseUnsignedInteger32(uint32_t& result) const; + + bool ParseUnsignedInteger64(uint64_t& result) const; + + bool ParseFloat(float& result) const; + + bool ParseDouble(double& result) const; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Endianness.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,207 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + + +/******************************************************************** + ** LINUX-LIKE ARCHITECTURES + ********************************************************************/ + +#if defined(__LSB_VERSION__) +// Linux Standard Base (LSB) does not come with be16toh, be32toh, and +// be64toh +# define ORTHANC_HAS_BUILTIN_BYTE_SWAP 0 +# include <endian.h> +#elif defined(__linux__) || defined(__EMSCRIPTEN__) +# define ORTHANC_HAS_BUILTIN_BYTE_SWAP 1 +# include <endian.h> +#endif + + +/******************************************************************** + ** WINDOWS ARCHITECTURES + ** + ** On Windows x86, "host" will always be little-endian ("le"). + ********************************************************************/ + +#if defined(_WIN32) +# if defined(_MSC_VER) +// Visual Studio - http://msdn.microsoft.com/en-us/library/a3140177.aspx +# define ORTHANC_HAS_BUILTIN_BYTE_SWAP 1 +# define be16toh(x) _byteswap_ushort(x) +# define be32toh(x) _byteswap_ulong(x) +# define be64toh(x) _byteswap_uint64(x) +# elif (__GNUC__ > 4 || (__GNUC__ == 4 && __GNUC_MINOR__ >= 3)) +// MinGW >= 4.3 - Use builtin intrinsic for byte swapping +# define ORTHANC_HAS_BUILTIN_BYTE_SWAP 1 +# define be16toh(x) __builtin_bswap16(x) +# define be32toh(x) __builtin_bswap32(x) +# define be64toh(x) __builtin_bswap64(x) +# else +// MinGW <= 4.2, we must manually implement the byte swapping +# define ORTHANC_HAS_BUILTIN_BYTE_SWAP 0 +# define be16toh(x) __orthanc_bswap16(x) +# define be32toh(x) __orthanc_bswap32(x) +# define be64toh(x) __orthanc_bswap64(x) +# endif + +# define htobe16(x) be16toh(x) +# define htobe32(x) be32toh(x) +# define htobe64(x) be64toh(x) + +# define htole16(x) x +# define htole32(x) x +# define htole64(x) x + +# define le16toh(x) x +# define le32toh(x) x +# define le64toh(x) x +#endif + + +/******************************************************************** + ** FREEBSD ARCHITECTURES + ********************************************************************/ + +#if defined(__FreeBSD__) || defined(__FreeBSD_kernel__) +# define ORTHANC_HAS_BUILTIN_BYTE_SWAP 1 +# include <arpa/inet.h> +#endif + + +/******************************************************************** + ** OPENBSD ARCHITECTURES + ********************************************************************/ + +#if defined(__OpenBSD__) +# define ORTHANC_HAS_BUILTIN_BYTE_SWAP 1 +# include <endian.h> +#endif + + +/******************************************************************** + ** APPLE ARCHITECTURES (including OS X) + ********************************************************************/ + +#if defined(__APPLE__) +# define ORTHANC_HAS_BUILTIN_BYTE_SWAP 1 +# include <libkern/OSByteOrder.h> +# define be16toh(x) OSSwapBigToHostInt16(x) +# define be32toh(x) OSSwapBigToHostInt32(x) +# define be64toh(x) OSSwapBigToHostInt64(x) + +# define htobe16(x) OSSwapHostToBigInt16(x) +# define htobe32(x) OSSwapHostToBigInt32(x) +# define htobe64(x) OSSwapHostToBigInt64(x) + +# define htole16(x) OSSwapHostToLittleInt16(x) +# define htole32(x) OSSwapHostToLittleInt32(x) +# define htole64(x) OSSwapHostToLittleInt64(x) + +# define le16toh(x) OSSwapLittleToHostInt16(x) +# define le32toh(x) OSSwapLittleToHostInt32(x) +# define le64toh(x) OSSwapLittleToHostInt64(x) +#endif + + +/******************************************************************** + ** PORTABLE (BUT SLOW) IMPLEMENTATION OF BYTE-SWAPPING + ********************************************************************/ + +#if ORTHANC_HAS_BUILTIN_BYTE_SWAP != 1 + +#include <stdint.h> + +static inline uint16_t __orthanc_bswap16(uint16_t a) +{ + return (a << 8) | (a >> 8); +} + +static inline uint32_t __orthanc_bswap32(uint32_t a) +{ + const uint8_t* p = reinterpret_cast<const uint8_t*>(&a); + return (static_cast<uint32_t>(p[0]) << 24 | + static_cast<uint32_t>(p[1]) << 16 | + static_cast<uint32_t>(p[2]) << 8 | + static_cast<uint32_t>(p[3])); +} + +static inline uint64_t __orthanc_bswap64(uint64_t a) +{ + const uint8_t* p = reinterpret_cast<const uint8_t*>(&a); + return (static_cast<uint64_t>(p[0]) << 56 | + static_cast<uint64_t>(p[1]) << 48 | + static_cast<uint64_t>(p[2]) << 40 | + static_cast<uint64_t>(p[3]) << 32 | + static_cast<uint64_t>(p[4]) << 24 | + static_cast<uint64_t>(p[5]) << 16 | + static_cast<uint64_t>(p[6]) << 8 | + static_cast<uint64_t>(p[7])); +} + +#if defined(__BYTE_ORDER) && defined(__LITTLE_ENDIAN) && defined(__BIG_ENDIAN) +# if __BYTE_ORDER == __LITTLE_ENDIAN +# define be16toh(x) __orthanc_bswap16(x) +# define be32toh(x) __orthanc_bswap32(x) +# define be64toh(x) __orthanc_bswap64(x) +# define htobe16(x) __orthanc_bswap16(x) +# define htobe32(x) __orthanc_bswap32(x) +# define htobe64(x) __orthanc_bswap64(x) +# define htole16(x) x +# define htole32(x) x +# define htole64(x) x +# define le16toh(x) x +# define le32toh(x) x +# define le64toh(x) x +# elif __BYTE_ORDER == __BIG_ENDIAN +# define be16toh(x) x +# define be32toh(x) x +# define be64toh(x) x +# define htobe16(x) x +# define htobe32(x) x +# define htobe64(x) x +# define htole16(x) __orthanc_bswap16(x) +# define htole32(x) __orthanc_bswap32(x) +# define htole64(x) __orthanc_bswap64(x) +# define le16toh(x) __orthanc_bswap16(x) +# define le32toh(x) __orthanc_bswap32(x) +# define le64toh(x) __orthanc_bswap64(x) +# else +# error Please support your platform here +# endif +#else +# error Please support your platform here +#endif + +#endif
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Enumerations.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,1716 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "PrecompiledHeaders.h" +#include "Enumerations.h" + +#include "OrthancException.h" +#include "Toolbox.h" +#include "Logging.h" + +#include <boost/thread/mutex.hpp> +#include <string.h> +#include <cassert> + +namespace Orthanc +{ + // This function is autogenerated by the script + // "Resources/GenerateErrorCodes.py" + const char* EnumerationToString(ErrorCode error) + { + switch (error) + { + case ErrorCode_InternalError: + return "Internal error"; + + case ErrorCode_Success: + return "Success"; + + case ErrorCode_Plugin: + return "Error encountered within the plugin engine"; + + case ErrorCode_NotImplemented: + return "Not implemented yet"; + + case ErrorCode_ParameterOutOfRange: + return "Parameter out of range"; + + case ErrorCode_NotEnoughMemory: + return "The server hosting Orthanc is running out of memory"; + + case ErrorCode_BadParameterType: + return "Bad type for a parameter"; + + case ErrorCode_BadSequenceOfCalls: + return "Bad sequence of calls"; + + case ErrorCode_InexistentItem: + return "Accessing an inexistent item"; + + case ErrorCode_BadRequest: + return "Bad request"; + + case ErrorCode_NetworkProtocol: + return "Error in the network protocol"; + + case ErrorCode_SystemCommand: + return "Error while calling a system command"; + + case ErrorCode_Database: + return "Error with the database engine"; + + case ErrorCode_UriSyntax: + return "Badly formatted URI"; + + case ErrorCode_InexistentFile: + return "Inexistent file"; + + case ErrorCode_CannotWriteFile: + return "Cannot write to file"; + + case ErrorCode_BadFileFormat: + return "Bad file format"; + + case ErrorCode_Timeout: + return "Timeout"; + + case ErrorCode_UnknownResource: + return "Unknown resource"; + + case ErrorCode_IncompatibleDatabaseVersion: + return "Incompatible version of the database"; + + case ErrorCode_FullStorage: + return "The file storage is full"; + + case ErrorCode_CorruptedFile: + return "Corrupted file (e.g. inconsistent MD5 hash)"; + + case ErrorCode_InexistentTag: + return "Inexistent tag"; + + case ErrorCode_ReadOnly: + return "Cannot modify a read-only data structure"; + + case ErrorCode_IncompatibleImageFormat: + return "Incompatible format of the images"; + + case ErrorCode_IncompatibleImageSize: + return "Incompatible size of the images"; + + case ErrorCode_SharedLibrary: + return "Error while using a shared library (plugin)"; + + case ErrorCode_UnknownPluginService: + return "Plugin invoking an unknown service"; + + case ErrorCode_UnknownDicomTag: + return "Unknown DICOM tag"; + + case ErrorCode_BadJson: + return "Cannot parse a JSON document"; + + case ErrorCode_Unauthorized: + return "Bad credentials were provided to an HTTP request"; + + case ErrorCode_BadFont: + return "Badly formatted font file"; + + case ErrorCode_DatabasePlugin: + return "The plugin implementing a custom database back-end does not fulfill the proper interface"; + + case ErrorCode_StorageAreaPlugin: + return "Error in the plugin implementing a custom storage area"; + + case ErrorCode_EmptyRequest: + return "The request is empty"; + + case ErrorCode_NotAcceptable: + return "Cannot send a response which is acceptable according to the Accept HTTP header"; + + case ErrorCode_NullPointer: + return "Cannot handle a NULL pointer"; + + case ErrorCode_DatabaseUnavailable: + return "The database is currently not available (probably a transient situation)"; + + case ErrorCode_SQLiteNotOpened: + return "SQLite: The database is not opened"; + + case ErrorCode_SQLiteAlreadyOpened: + return "SQLite: Connection is already open"; + + case ErrorCode_SQLiteCannotOpen: + return "SQLite: Unable to open the database"; + + case ErrorCode_SQLiteStatementAlreadyUsed: + return "SQLite: This cached statement is already being referred to"; + + case ErrorCode_SQLiteExecute: + return "SQLite: Cannot execute a command"; + + case ErrorCode_SQLiteRollbackWithoutTransaction: + return "SQLite: Rolling back a nonexistent transaction (have you called Begin()?)"; + + case ErrorCode_SQLiteCommitWithoutTransaction: + return "SQLite: Committing a nonexistent transaction"; + + case ErrorCode_SQLiteRegisterFunction: + return "SQLite: Unable to register a function"; + + case ErrorCode_SQLiteFlush: + return "SQLite: Unable to flush the database"; + + case ErrorCode_SQLiteCannotRun: + return "SQLite: Cannot run a cached statement"; + + case ErrorCode_SQLiteCannotStep: + return "SQLite: Cannot step over a cached statement"; + + case ErrorCode_SQLiteBindOutOfRange: + return "SQLite: Bing a value while out of range (serious error)"; + + case ErrorCode_SQLitePrepareStatement: + return "SQLite: Cannot prepare a cached statement"; + + case ErrorCode_SQLiteTransactionAlreadyStarted: + return "SQLite: Beginning the same transaction twice"; + + case ErrorCode_SQLiteTransactionCommit: + return "SQLite: Failure when committing the transaction"; + + case ErrorCode_SQLiteTransactionBegin: + return "SQLite: Cannot start a transaction"; + + case ErrorCode_DirectoryOverFile: + return "The directory to be created is already occupied by a regular file"; + + case ErrorCode_FileStorageCannotWrite: + return "Unable to create a subdirectory or a file in the file storage"; + + case ErrorCode_DirectoryExpected: + return "The specified path does not point to a directory"; + + case ErrorCode_HttpPortInUse: + return "The TCP port of the HTTP server is privileged or already in use"; + + case ErrorCode_DicomPortInUse: + return "The TCP port of the DICOM server is privileged or already in use"; + + case ErrorCode_BadHttpStatusInRest: + return "This HTTP status is not allowed in a REST API"; + + case ErrorCode_RegularFileExpected: + return "The specified path does not point to a regular file"; + + case ErrorCode_PathToExecutable: + return "Unable to get the path to the executable"; + + case ErrorCode_MakeDirectory: + return "Cannot create a directory"; + + case ErrorCode_BadApplicationEntityTitle: + return "An application entity title (AET) cannot be empty or be longer than 16 characters"; + + case ErrorCode_NoCFindHandler: + return "No request handler factory for DICOM C-FIND SCP"; + + case ErrorCode_NoCMoveHandler: + return "No request handler factory for DICOM C-MOVE SCP"; + + case ErrorCode_NoCStoreHandler: + return "No request handler factory for DICOM C-STORE SCP"; + + case ErrorCode_NoApplicationEntityFilter: + return "No application entity filter"; + + case ErrorCode_NoSopClassOrInstance: + return "DicomUserConnection: Unable to find the SOP class and instance"; + + case ErrorCode_NoPresentationContext: + return "DicomUserConnection: No acceptable presentation context for modality"; + + case ErrorCode_DicomFindUnavailable: + return "DicomUserConnection: The C-FIND command is not supported by the remote SCP"; + + case ErrorCode_DicomMoveUnavailable: + return "DicomUserConnection: The C-MOVE command is not supported by the remote SCP"; + + case ErrorCode_CannotStoreInstance: + return "Cannot store an instance"; + + case ErrorCode_CreateDicomNotString: + return "Only string values are supported when creating DICOM instances"; + + case ErrorCode_CreateDicomOverrideTag: + return "Trying to override a value inherited from a parent module"; + + case ErrorCode_CreateDicomUseContent: + return "Use \"Content\" to inject an image into a new DICOM instance"; + + case ErrorCode_CreateDicomNoPayload: + return "No payload is present for one instance in the series"; + + case ErrorCode_CreateDicomUseDataUriScheme: + return "The payload of the DICOM instance must be specified according to Data URI scheme"; + + case ErrorCode_CreateDicomBadParent: + return "Trying to attach a new DICOM instance to an inexistent resource"; + + case ErrorCode_CreateDicomParentIsInstance: + return "Trying to attach a new DICOM instance to an instance (must be a series, study or patient)"; + + case ErrorCode_CreateDicomParentEncoding: + return "Unable to get the encoding of the parent resource"; + + case ErrorCode_UnknownModality: + return "Unknown modality"; + + case ErrorCode_BadJobOrdering: + return "Bad ordering of filters in a job"; + + case ErrorCode_JsonToLuaTable: + return "Cannot convert the given JSON object to a Lua table"; + + case ErrorCode_CannotCreateLua: + return "Cannot create the Lua context"; + + case ErrorCode_CannotExecuteLua: + return "Cannot execute a Lua command"; + + case ErrorCode_LuaAlreadyExecuted: + return "Arguments cannot be pushed after the Lua function is executed"; + + case ErrorCode_LuaBadOutput: + return "The Lua function does not give the expected number of outputs"; + + case ErrorCode_NotLuaPredicate: + return "The Lua function is not a predicate (only true/false outputs allowed)"; + + case ErrorCode_LuaReturnsNoString: + return "The Lua function does not return a string"; + + case ErrorCode_StorageAreaAlreadyRegistered: + return "Another plugin has already registered a custom storage area"; + + case ErrorCode_DatabaseBackendAlreadyRegistered: + return "Another plugin has already registered a custom database back-end"; + + case ErrorCode_DatabaseNotInitialized: + return "Plugin trying to call the database during its initialization"; + + case ErrorCode_SslDisabled: + return "Orthanc has been built without SSL support"; + + case ErrorCode_CannotOrderSlices: + return "Unable to order the slices of the series"; + + case ErrorCode_NoWorklistHandler: + return "No request handler factory for DICOM C-Find Modality SCP"; + + case ErrorCode_AlreadyExistingTag: + return "Cannot override the value of a tag that already exists"; + + default: + if (error >= ErrorCode_START_PLUGINS) + { + return "Error encountered within some plugin"; + } + else + { + return "Unknown error code"; + } + } + } + + + const char* EnumerationToString(HttpMethod method) + { + switch (method) + { + case HttpMethod_Get: + return "GET"; + + case HttpMethod_Post: + return "POST"; + + case HttpMethod_Delete: + return "DELETE"; + + case HttpMethod_Put: + return "PUT"; + + default: + return "?"; + } + } + + + const char* EnumerationToString(HttpStatus status) + { + switch (status) + { + case HttpStatus_100_Continue: + return "Continue"; + + case HttpStatus_101_SwitchingProtocols: + return "Switching Protocols"; + + case HttpStatus_102_Processing: + return "Processing"; + + case HttpStatus_200_Ok: + return "OK"; + + case HttpStatus_201_Created: + return "Created"; + + case HttpStatus_202_Accepted: + return "Accepted"; + + case HttpStatus_203_NonAuthoritativeInformation: + return "Non-Authoritative Information"; + + case HttpStatus_204_NoContent: + return "No Content"; + + case HttpStatus_205_ResetContent: + return "Reset Content"; + + case HttpStatus_206_PartialContent: + return "Partial Content"; + + case HttpStatus_207_MultiStatus: + return "Multi-Status"; + + case HttpStatus_208_AlreadyReported: + return "Already Reported"; + + case HttpStatus_226_IMUsed: + return "IM Used"; + + case HttpStatus_300_MultipleChoices: + return "Multiple Choices"; + + case HttpStatus_301_MovedPermanently: + return "Moved Permanently"; + + case HttpStatus_302_Found: + return "Found"; + + case HttpStatus_303_SeeOther: + return "See Other"; + + case HttpStatus_304_NotModified: + return "Not Modified"; + + case HttpStatus_305_UseProxy: + return "Use Proxy"; + + case HttpStatus_307_TemporaryRedirect: + return "Temporary Redirect"; + + case HttpStatus_400_BadRequest: + return "Bad Request"; + + case HttpStatus_401_Unauthorized: + return "Unauthorized"; + + case HttpStatus_402_PaymentRequired: + return "Payment Required"; + + case HttpStatus_403_Forbidden: + return "Forbidden"; + + case HttpStatus_404_NotFound: + return "Not Found"; + + case HttpStatus_405_MethodNotAllowed: + return "Method Not Allowed"; + + case HttpStatus_406_NotAcceptable: + return "Not Acceptable"; + + case HttpStatus_407_ProxyAuthenticationRequired: + return "Proxy Authentication Required"; + + case HttpStatus_408_RequestTimeout: + return "Request Timeout"; + + case HttpStatus_409_Conflict: + return "Conflict"; + + case HttpStatus_410_Gone: + return "Gone"; + + case HttpStatus_411_LengthRequired: + return "Length Required"; + + case HttpStatus_412_PreconditionFailed: + return "Precondition Failed"; + + case HttpStatus_413_RequestEntityTooLarge: + return "Request Entity Too Large"; + + case HttpStatus_414_RequestUriTooLong: + return "Request-URI Too Long"; + + case HttpStatus_415_UnsupportedMediaType: + return "Unsupported Media Type"; + + case HttpStatus_416_RequestedRangeNotSatisfiable: + return "Requested Range Not Satisfiable"; + + case HttpStatus_417_ExpectationFailed: + return "Expectation Failed"; + + case HttpStatus_422_UnprocessableEntity: + return "Unprocessable Entity"; + + case HttpStatus_423_Locked: + return "Locked"; + + case HttpStatus_424_FailedDependency: + return "Failed Dependency"; + + case HttpStatus_426_UpgradeRequired: + return "Upgrade Required"; + + case HttpStatus_500_InternalServerError: + return "Internal Server Error"; + + case HttpStatus_501_NotImplemented: + return "Not Implemented"; + + case HttpStatus_502_BadGateway: + return "Bad Gateway"; + + case HttpStatus_503_ServiceUnavailable: + return "Service Unavailable"; + + case HttpStatus_504_GatewayTimeout: + return "Gateway Timeout"; + + case HttpStatus_505_HttpVersionNotSupported: + return "HTTP Version Not Supported"; + + case HttpStatus_506_VariantAlsoNegotiates: + return "Variant Also Negotiates"; + + case HttpStatus_507_InsufficientStorage: + return "Insufficient Storage"; + + case HttpStatus_509_BandwidthLimitExceeded: + return "Bandwidth Limit Exceeded"; + + case HttpStatus_510_NotExtended: + return "Not Extended"; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + const char* EnumerationToString(ResourceType type) + { + switch (type) + { + case ResourceType_Patient: + return "Patient"; + + case ResourceType_Study: + return "Study"; + + case ResourceType_Series: + return "Series"; + + case ResourceType_Instance: + return "Instance"; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + const char* EnumerationToString(ImageFormat format) + { + switch (format) + { + case ImageFormat_Png: + return "Png"; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + const char* EnumerationToString(Encoding encoding) + { + switch (encoding) + { + case Encoding_Ascii: + return "Ascii"; + + case Encoding_Utf8: + return "Utf8"; + + case Encoding_Latin1: + return "Latin1"; + + case Encoding_Latin2: + return "Latin2"; + + case Encoding_Latin3: + return "Latin3"; + + case Encoding_Latin4: + return "Latin4"; + + case Encoding_Latin5: + return "Latin5"; + + case Encoding_Cyrillic: + return "Cyrillic"; + + case Encoding_Windows1251: + return "Windows1251"; + + case Encoding_Arabic: + return "Arabic"; + + case Encoding_Greek: + return "Greek"; + + case Encoding_Hebrew: + return "Hebrew"; + + case Encoding_Thai: + return "Thai"; + + case Encoding_Japanese: + return "Japanese"; + + case Encoding_Chinese: + return "Chinese"; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + const char* EnumerationToString(PhotometricInterpretation photometric) + { + switch (photometric) + { + case PhotometricInterpretation_RGB: + return "RGB"; + + case PhotometricInterpretation_Monochrome1: + return "MONOCHROME1"; + + case PhotometricInterpretation_Monochrome2: + return "MONOCHROME2"; + + case PhotometricInterpretation_ARGB: + return "ARGB"; + + case PhotometricInterpretation_CMYK: + return "CMYK"; + + case PhotometricInterpretation_HSV: + return "HSV"; + + case PhotometricInterpretation_Palette: + return "PALETTE COLOR"; + + case PhotometricInterpretation_YBRFull: + return "YBR_FULL"; + + case PhotometricInterpretation_YBRFull422: + return "YBR_FULL_422"; + + case PhotometricInterpretation_YBRPartial420: + return "YBR_PARTIAL_420"; + + case PhotometricInterpretation_YBRPartial422: + return "YBR_PARTIAL_422"; + + case PhotometricInterpretation_YBR_ICT: + return "YBR_ICT"; + + case PhotometricInterpretation_YBR_RCT: + return "YBR_RCT"; + + case PhotometricInterpretation_Unknown: + return "Unknown"; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + const char* EnumerationToString(RequestOrigin origin) + { + switch (origin) + { + case RequestOrigin_Unknown: + return "Unknown"; + + case RequestOrigin_DicomProtocol: + return "DicomProtocol"; + + case RequestOrigin_RestApi: + return "RestApi"; + + case RequestOrigin_Plugins: + return "Plugins"; + + case RequestOrigin_Lua: + return "Lua"; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + const char* EnumerationToString(LogLevel level) + { + switch (level) + { + case LogLevel_Error: + return "ERROR"; + + case LogLevel_Warning: + return "WARNING"; + + case LogLevel_Info: + return "INFO"; + + case LogLevel_Trace: + return "TRACE"; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + const char* EnumerationToString(PixelFormat format) + { + switch (format) + { + case PixelFormat_RGB24: + return "RGB24"; + + case PixelFormat_RGBA32: + return "RGBA32"; + + case PixelFormat_BGRA32: + return "BGRA32"; + + case PixelFormat_Grayscale8: + return "Grayscale (unsigned 8bpp)"; + + case PixelFormat_Grayscale16: + return "Grayscale (unsigned 16bpp)"; + + case PixelFormat_SignedGrayscale16: + return "Grayscale (signed 16bpp)"; + + case PixelFormat_Float32: + return "Grayscale (float 32bpp)"; + + case PixelFormat_Grayscale32: + return "Grayscale (unsigned 32bpp)"; + + case PixelFormat_RGB48: + return "RGB48"; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + const char* EnumerationToString(ModalityManufacturer manufacturer) + { + switch (manufacturer) + { + case ModalityManufacturer_Generic: + return "Generic"; + + case ModalityManufacturer_GenericNoWildcardInDates: + return "GenericNoWildcardInDates"; + + case ModalityManufacturer_GenericNoUniversalWildcard: + return "GenericNoUniversalWildcard"; + + case ModalityManufacturer_StoreScp: + return "StoreScp"; + + case ModalityManufacturer_ClearCanvas: + return "ClearCanvas"; + + case ModalityManufacturer_Dcm4Chee: + return "Dcm4Chee"; + + case ModalityManufacturer_Vitrea: + return "Vitrea"; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + const char* EnumerationToString(DicomRequestType type) + { + switch (type) + { + case DicomRequestType_Echo: + return "Echo"; + break; + + case DicomRequestType_Find: + return "Find"; + break; + + case DicomRequestType_Get: + return "Get"; + break; + + case DicomRequestType_Move: + return "Move"; + break; + + case DicomRequestType_Store: + return "Store"; + break; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + const char* EnumerationToString(TransferSyntax syntax) + { + switch (syntax) + { + case TransferSyntax_Deflated: + return "Deflated"; + + case TransferSyntax_Jpeg: + return "JPEG"; + + case TransferSyntax_Jpeg2000: + return "JPEG2000"; + + case TransferSyntax_JpegLossless: + return "JPEG Lossless"; + + case TransferSyntax_Jpip: + return "JPIP"; + + case TransferSyntax_Mpeg2: + return "MPEG2"; + + case TransferSyntax_Rle: + return "RLE"; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + const char* EnumerationToString(DicomVersion version) + { + switch (version) + { + case DicomVersion_2008: + return "2008"; + break; + + case DicomVersion_2017c: + return "2017c"; + break; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + Encoding StringToEncoding(const char* encoding) + { + std::string s(encoding); + Toolbox::ToUpperCase(s); + + if (s == "UTF8") + { + return Encoding_Utf8; + } + + if (s == "ASCII") + { + return Encoding_Ascii; + } + + if (s == "LATIN1") + { + return Encoding_Latin1; + } + + if (s == "LATIN2") + { + return Encoding_Latin2; + } + + if (s == "LATIN3") + { + return Encoding_Latin3; + } + + if (s == "LATIN4") + { + return Encoding_Latin4; + } + + if (s == "LATIN5") + { + return Encoding_Latin5; + } + + if (s == "CYRILLIC") + { + return Encoding_Cyrillic; + } + + if (s == "WINDOWS1251") + { + return Encoding_Windows1251; + } + + if (s == "ARABIC") + { + return Encoding_Arabic; + } + + if (s == "GREEK") + { + return Encoding_Greek; + } + + if (s == "HEBREW") + { + return Encoding_Hebrew; + } + + if (s == "THAI") + { + return Encoding_Thai; + } + + if (s == "JAPANESE") + { + return Encoding_Japanese; + } + + if (s == "CHINESE") + { + return Encoding_Chinese; + } + + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + + ResourceType StringToResourceType(const char* type) + { + std::string s(type); + Toolbox::ToUpperCase(s); + + if (s == "PATIENT" || s == "PATIENTS") + { + return ResourceType_Patient; + } + else if (s == "STUDY" || s == "STUDIES") + { + return ResourceType_Study; + } + else if (s == "SERIES") + { + return ResourceType_Series; + } + else if (s == "INSTANCE" || s == "IMAGE" || + s == "INSTANCES" || s == "IMAGES") + { + return ResourceType_Instance; + } + + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + + ImageFormat StringToImageFormat(const char* format) + { + std::string s(format); + Toolbox::ToUpperCase(s); + + if (s == "PNG") + { + return ImageFormat_Png; + } + + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + + LogLevel StringToLogLevel(const char *level) + { + if (strcmp(level, "ERROR") == 0) + { + return LogLevel_Error; + } + else if (strcmp(level, "WARNING") == 0) + { + return LogLevel_Warning; + } + else if (strcmp(level, "INFO") == 0) + { + return LogLevel_Info; + } + else if (strcmp(level, "TRACE") == 0) + { + return LogLevel_Trace; + } + else + { + throw OrthancException(ErrorCode_InternalError); + } + } + + + ValueRepresentation StringToValueRepresentation(const std::string& vr, + bool throwIfUnsupported) + { + if (vr == "AE") + { + return ValueRepresentation_ApplicationEntity; + } + else if (vr == "AS") + { + return ValueRepresentation_AgeString; + } + else if (vr == "AT") + { + return ValueRepresentation_AttributeTag; + } + else if (vr == "CS") + { + return ValueRepresentation_CodeString; + } + else if (vr == "DA") + { + return ValueRepresentation_Date; + } + else if (vr == "DS") + { + return ValueRepresentation_DecimalString; + } + else if (vr == "DT") + { + return ValueRepresentation_DateTime; + } + else if (vr == "FL") + { + return ValueRepresentation_FloatingPointSingle; + } + else if (vr == "FD") + { + return ValueRepresentation_FloatingPointDouble; + } + else if (vr == "IS") + { + return ValueRepresentation_IntegerString; + } + else if (vr == "LO") + { + return ValueRepresentation_LongString; + } + else if (vr == "LT") + { + return ValueRepresentation_LongText; + } + else if (vr == "OB") + { + return ValueRepresentation_OtherByte; + } + else if (vr == "OD") + { + return ValueRepresentation_OtherDouble; + } + else if (vr == "OF") + { + return ValueRepresentation_OtherFloat; + } + else if (vr == "OL") + { + return ValueRepresentation_OtherLong; + } + else if (vr == "OW") + { + return ValueRepresentation_OtherWord; + } + else if (vr == "PN") + { + return ValueRepresentation_PersonName; + } + else if (vr == "SH") + { + return ValueRepresentation_ShortString; + } + else if (vr == "SL") + { + return ValueRepresentation_SignedLong; + } + else if (vr == "SQ") + { + return ValueRepresentation_Sequence; + } + else if (vr == "SS") + { + return ValueRepresentation_SignedShort; + } + else if (vr == "ST") + { + return ValueRepresentation_ShortText; + } + else if (vr == "TM") + { + return ValueRepresentation_Time; + } + else if (vr == "UC") + { + return ValueRepresentation_UnlimitedCharacters; + } + else if (vr == "UI") + { + return ValueRepresentation_UniqueIdentifier; + } + else if (vr == "UL") + { + return ValueRepresentation_UnsignedLong; + } + else if (vr == "UN") + { + return ValueRepresentation_Unknown; + } + else if (vr == "UR") + { + return ValueRepresentation_UniversalResource; + } + else if (vr == "US") + { + return ValueRepresentation_UnsignedShort; + } + else if (vr == "UT") + { + return ValueRepresentation_UnlimitedText; + } + else + { + std::string s = "Unsupported value representation encountered: " + vr; + + if (throwIfUnsupported) + { + LOG(ERROR) << s; + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + else + { + LOG(INFO) << s; + return ValueRepresentation_NotSupported; + } + } + } + + + PhotometricInterpretation StringToPhotometricInterpretation(const char* value) + { + // http://dicom.nema.org/medical/dicom/2017a/output/chtml/part03/sect_C.7.6.3.html#sect_C.7.6.3.1.2 + std::string s(value); + + if (s == "MONOCHROME1") + { + return PhotometricInterpretation_Monochrome1; + } + + if (s == "MONOCHROME2") + { + return PhotometricInterpretation_Monochrome2; + } + + if (s == "PALETTE COLOR") + { + return PhotometricInterpretation_Palette; + } + + if (s == "RGB") + { + return PhotometricInterpretation_RGB; + } + + if (s == "HSV") + { + return PhotometricInterpretation_HSV; + } + + if (s == "ARGB") + { + return PhotometricInterpretation_ARGB; + } + + if (s == "CMYK") + { + return PhotometricInterpretation_CMYK; + } + + if (s == "YBR_FULL") + { + return PhotometricInterpretation_YBRFull; + } + + if (s == "YBR_FULL_422") + { + return PhotometricInterpretation_YBRFull422; + } + + if (s == "YBR_PARTIAL_422") + { + return PhotometricInterpretation_YBRPartial422; + } + + if (s == "YBR_PARTIAL_420") + { + return PhotometricInterpretation_YBRPartial420; + } + + if (s == "YBR_ICT") + { + return PhotometricInterpretation_YBR_ICT; + } + + if (s == "YBR_RCT") + { + return PhotometricInterpretation_YBR_RCT; + } + + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + + ModalityManufacturer StringToModalityManufacturer(const std::string& manufacturer) + { + ModalityManufacturer result; + bool obsolete = false; + + if (manufacturer == "Generic") + { + return ModalityManufacturer_Generic; + } + else if (manufacturer == "GenericNoWildcardInDates") + { + return ModalityManufacturer_GenericNoWildcardInDates; + } + else if (manufacturer == "GenericNoUniversalWildcard") + { + return ModalityManufacturer_GenericNoUniversalWildcard; + } + else if (manufacturer == "ClearCanvas") + { + return ModalityManufacturer_ClearCanvas; + } + else if (manufacturer == "StoreScp") + { + return ModalityManufacturer_StoreScp; + } + else if (manufacturer == "Dcm4Chee") + { + return ModalityManufacturer_Dcm4Chee; + } + else if (manufacturer == "Vitrea") + { + return ModalityManufacturer_Vitrea; + } + else if (manufacturer == "AgfaImpax" || + manufacturer == "SyngoVia") + { + result = ModalityManufacturer_GenericNoWildcardInDates; + obsolete = true; + } + else if (manufacturer == "EFilm2" || + manufacturer == "MedInria") + { + result = ModalityManufacturer_Generic; + obsolete = true; + } + else + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + if (obsolete) + { + LOG(WARNING) << "The \"" << manufacturer << "\" manufacturer is obsolete since " + << "Orthanc 1.3.0. To guarantee compatibility with future Orthanc " + << "releases, you should replace it by \"" + << EnumerationToString(result) + << "\" in your configuration file."; + } + + return result; + } + + + DicomVersion StringToDicomVersion(const std::string& version) + { + if (version == "2008") + { + return DicomVersion_2008; + } + else if (version == "2017c") + { + return DicomVersion_2017c; + } + else + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + unsigned int GetBytesPerPixel(PixelFormat format) + { + switch (format) + { + case PixelFormat_Grayscale8: + return 1; + + case PixelFormat_Grayscale16: + case PixelFormat_SignedGrayscale16: + return 2; + + case PixelFormat_RGB24: + return 3; + + case PixelFormat_RGBA32: + case PixelFormat_BGRA32: + case PixelFormat_Grayscale32: + return 4; + + case PixelFormat_Float32: + assert(sizeof(float) == 4); + return 4; + + case PixelFormat_RGB48: + return 6; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + bool GetDicomEncoding(Encoding& encoding, + const char* specificCharacterSet) + { + std::string s = Toolbox::StripSpaces(specificCharacterSet); + Toolbox::ToUpperCase(s); + + // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#sect_C.12.1.1.2 + // https://github.com/dcm4che/dcm4che/blob/master/dcm4che-core/src/main/java/org/dcm4che3/data/SpecificCharacterSet.java + if (s == "ISO_IR 6" || + s == "ISO 2022 IR 6") + { + encoding = Encoding_Ascii; + } + else if (s == "ISO_IR 192") + { + encoding = Encoding_Utf8; + } + else if (s == "ISO_IR 100" || + s == "ISO 2022 IR 100") + { + encoding = Encoding_Latin1; + } + else if (s == "ISO_IR 101" || + s == "ISO 2022 IR 101") + { + encoding = Encoding_Latin2; + } + else if (s == "ISO_IR 109" || + s == "ISO 2022 IR 109") + { + encoding = Encoding_Latin3; + } + else if (s == "ISO_IR 110" || + s == "ISO 2022 IR 110") + { + encoding = Encoding_Latin4; + } + else if (s == "ISO_IR 148" || + s == "ISO 2022 IR 148") + { + encoding = Encoding_Latin5; + } + else if (s == "ISO_IR 144" || + s == "ISO 2022 IR 144") + { + encoding = Encoding_Cyrillic; + } + else if (s == "ISO_IR 127" || + s == "ISO 2022 IR 127") + { + encoding = Encoding_Arabic; + } + else if (s == "ISO_IR 126" || + s == "ISO 2022 IR 126") + { + encoding = Encoding_Greek; + } + else if (s == "ISO_IR 138" || + s == "ISO 2022 IR 138") + { + encoding = Encoding_Hebrew; + } + else if (s == "ISO_IR 166" || s == "ISO 2022 IR 166") + { + encoding = Encoding_Thai; + } + else if (s == "ISO_IR 13" || s == "ISO 2022 IR 13") + { + encoding = Encoding_Japanese; + } + else if (s == "GB18030" || s == "GBK") + { + /** + * According to tumashu@163.com, "In China, many dicom file's + * 0008,0005 tag is set as "GBK", instead of "GB18030", GBK is a + * subset of GB18030, and which is used frequently in China, + * suggest support it." + * https://groups.google.com/d/msg/orthanc-users/WMM8LMbjpUc/02-1f_yFCgAJ + **/ + encoding = Encoding_Chinese; + } + /* + else if (s == "ISO 2022 IR 149") + { + TODO + } + else if (s == "ISO 2022 IR 159") + { + TODO + } + else if (s == "ISO 2022 IR 87") + { + TODO + } + */ + else + { + return false; + } + + // The encoding was properly detected + return true; + } + + + ResourceType GetChildResourceType(ResourceType type) + { + switch (type) + { + case ResourceType_Patient: + return ResourceType_Study; + + case ResourceType_Study: + return ResourceType_Series; + + case ResourceType_Series: + return ResourceType_Instance; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + ResourceType GetParentResourceType(ResourceType type) + { + switch (type) + { + case ResourceType_Study: + return ResourceType_Patient; + + case ResourceType_Series: + return ResourceType_Study; + + case ResourceType_Instance: + return ResourceType_Series; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + DicomModule GetModule(ResourceType type) + { + switch (type) + { + case ResourceType_Patient: + return DicomModule_Patient; + + case ResourceType_Study: + return DicomModule_Study; + + case ResourceType_Series: + return DicomModule_Series; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + + const char* GetDicomSpecificCharacterSet(Encoding encoding) + { + // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#sect_C.12.1.1.2 + switch (encoding) + { + case Encoding_Ascii: + return "ISO_IR 6"; + + case Encoding_Utf8: + return "ISO_IR 192"; + + case Encoding_Latin1: + return "ISO_IR 100"; + + case Encoding_Latin2: + return "ISO_IR 101"; + + case Encoding_Latin3: + return "ISO_IR 109"; + + case Encoding_Latin4: + return "ISO_IR 110"; + + case Encoding_Latin5: + return "ISO_IR 148"; + + case Encoding_Cyrillic: + return "ISO_IR 144"; + + case Encoding_Arabic: + return "ISO_IR 127"; + + case Encoding_Greek: + return "ISO_IR 126"; + + case Encoding_Hebrew: + return "ISO_IR 138"; + + case Encoding_Japanese: + return "ISO_IR 13"; + + case Encoding_Chinese: + return "GB18030"; + + case Encoding_Thai: + return "ISO_IR 166"; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + // This function is autogenerated by the script + // "Resources/GenerateErrorCodes.py" + HttpStatus ConvertErrorCodeToHttpStatus(ErrorCode error) + { + switch (error) + { + case ErrorCode_Success: + return HttpStatus_200_Ok; + + case ErrorCode_ParameterOutOfRange: + return HttpStatus_400_BadRequest; + + case ErrorCode_BadParameterType: + return HttpStatus_400_BadRequest; + + case ErrorCode_InexistentItem: + return HttpStatus_404_NotFound; + + case ErrorCode_BadRequest: + return HttpStatus_400_BadRequest; + + case ErrorCode_UriSyntax: + return HttpStatus_400_BadRequest; + + case ErrorCode_InexistentFile: + return HttpStatus_404_NotFound; + + case ErrorCode_BadFileFormat: + return HttpStatus_400_BadRequest; + + case ErrorCode_UnknownResource: + return HttpStatus_404_NotFound; + + case ErrorCode_InexistentTag: + return HttpStatus_404_NotFound; + + case ErrorCode_BadJson: + return HttpStatus_400_BadRequest; + + case ErrorCode_Unauthorized: + return HttpStatus_401_Unauthorized; + + case ErrorCode_NotAcceptable: + return HttpStatus_406_NotAcceptable; + + case ErrorCode_DatabaseUnavailable: + return HttpStatus_503_ServiceUnavailable; + + default: + return HttpStatus_500_InternalServerError; + } + } + + + bool IsUserContentType(FileContentType type) + { + return (type >= FileContentType_StartUser && + type <= FileContentType_EndUser); + } + + + bool IsBinaryValueRepresentation(ValueRepresentation vr) + { + // http://dicom.nema.org/medical/dicom/current/output/chtml/part05/sect_6.2.html + + switch (vr) + { + case ValueRepresentation_ApplicationEntity: // AE + case ValueRepresentation_AgeString: // AS + case ValueRepresentation_CodeString: // CS + case ValueRepresentation_Date: // DA + case ValueRepresentation_DecimalString: // DS + case ValueRepresentation_DateTime: // DT + case ValueRepresentation_IntegerString: // IS + case ValueRepresentation_LongString: // LO + case ValueRepresentation_LongText: // LT + case ValueRepresentation_PersonName: // PN + case ValueRepresentation_ShortString: // SH + case ValueRepresentation_ShortText: // ST + case ValueRepresentation_Time: // TM + case ValueRepresentation_UnlimitedCharacters: // UC + case ValueRepresentation_UniqueIdentifier: // UI (UID) + case ValueRepresentation_UniversalResource: // UR (URI or URL) + case ValueRepresentation_UnlimitedText: // UT + { + return false; + } + + /** + * Below are all the VR whose character repertoire is tagged as + * "not applicable" + **/ + case ValueRepresentation_AttributeTag: // AT (2 x uint16_t) + case ValueRepresentation_FloatingPointSingle: // FL (float) + case ValueRepresentation_FloatingPointDouble: // FD (double) + case ValueRepresentation_OtherByte: // OB + case ValueRepresentation_OtherDouble: // OD + case ValueRepresentation_OtherFloat: // OF + case ValueRepresentation_OtherLong: // OL + case ValueRepresentation_OtherWord: // OW + case ValueRepresentation_SignedLong: // SL (int32_t) + case ValueRepresentation_Sequence: // SQ + case ValueRepresentation_SignedShort: // SS (int16_t) + case ValueRepresentation_UnsignedLong: // UL (uint32_t) + case ValueRepresentation_Unknown: // UN + case ValueRepresentation_UnsignedShort: // US (uint16_t) + { + return true; + } + + case ValueRepresentation_NotSupported: + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + static boost::mutex defaultEncodingMutex_; // Should not be necessary + static Encoding defaultEncoding_ = ORTHANC_DEFAULT_DICOM_ENCODING; + + Encoding GetDefaultDicomEncoding() + { + boost::mutex::scoped_lock lock(defaultEncodingMutex_); + return defaultEncoding_; + } + + void SetDefaultDicomEncoding(Encoding encoding) + { + std::string name = EnumerationToString(encoding); + + { + boost::mutex::scoped_lock lock(defaultEncodingMutex_); + defaultEncoding_ = encoding; + } + + LOG(INFO) << "Default encoding for DICOM was changed to: " << name; + } + +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Enumerations.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,662 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <string> + + +#if defined(_MSC_VER) +# define ORTHANC_FORCE_INLINE __forceinline +#elif defined(__GNUC__) || defined(__clang__) || defined(__EMSCRIPTEN__) +# define ORTHANC_FORCE_INLINE inline __attribute((always_inline)) +#else +# error Please support your compiler here +#endif + + +namespace Orthanc +{ + enum Endianness + { + Endianness_Unknown, + Endianness_Big, + Endianness_Little + }; + + // This enumeration is autogenerated by the script + // "Resources/GenerateErrorCodes.py" + enum ErrorCode + { + ErrorCode_InternalError = -1 /*!< Internal error */, + ErrorCode_Success = 0 /*!< Success */, + ErrorCode_Plugin = 1 /*!< Error encountered within the plugin engine */, + ErrorCode_NotImplemented = 2 /*!< Not implemented yet */, + ErrorCode_ParameterOutOfRange = 3 /*!< Parameter out of range */, + ErrorCode_NotEnoughMemory = 4 /*!< The server hosting Orthanc is running out of memory */, + ErrorCode_BadParameterType = 5 /*!< Bad type for a parameter */, + ErrorCode_BadSequenceOfCalls = 6 /*!< Bad sequence of calls */, + ErrorCode_InexistentItem = 7 /*!< Accessing an inexistent item */, + ErrorCode_BadRequest = 8 /*!< Bad request */, + ErrorCode_NetworkProtocol = 9 /*!< Error in the network protocol */, + ErrorCode_SystemCommand = 10 /*!< Error while calling a system command */, + ErrorCode_Database = 11 /*!< Error with the database engine */, + ErrorCode_UriSyntax = 12 /*!< Badly formatted URI */, + ErrorCode_InexistentFile = 13 /*!< Inexistent file */, + ErrorCode_CannotWriteFile = 14 /*!< Cannot write to file */, + ErrorCode_BadFileFormat = 15 /*!< Bad file format */, + ErrorCode_Timeout = 16 /*!< Timeout */, + ErrorCode_UnknownResource = 17 /*!< Unknown resource */, + ErrorCode_IncompatibleDatabaseVersion = 18 /*!< Incompatible version of the database */, + ErrorCode_FullStorage = 19 /*!< The file storage is full */, + ErrorCode_CorruptedFile = 20 /*!< Corrupted file (e.g. inconsistent MD5 hash) */, + ErrorCode_InexistentTag = 21 /*!< Inexistent tag */, + ErrorCode_ReadOnly = 22 /*!< Cannot modify a read-only data structure */, + ErrorCode_IncompatibleImageFormat = 23 /*!< Incompatible format of the images */, + ErrorCode_IncompatibleImageSize = 24 /*!< Incompatible size of the images */, + ErrorCode_SharedLibrary = 25 /*!< Error while using a shared library (plugin) */, + ErrorCode_UnknownPluginService = 26 /*!< Plugin invoking an unknown service */, + ErrorCode_UnknownDicomTag = 27 /*!< Unknown DICOM tag */, + ErrorCode_BadJson = 28 /*!< Cannot parse a JSON document */, + ErrorCode_Unauthorized = 29 /*!< Bad credentials were provided to an HTTP request */, + ErrorCode_BadFont = 30 /*!< Badly formatted font file */, + ErrorCode_DatabasePlugin = 31 /*!< The plugin implementing a custom database back-end does not fulfill the proper interface */, + ErrorCode_StorageAreaPlugin = 32 /*!< Error in the plugin implementing a custom storage area */, + ErrorCode_EmptyRequest = 33 /*!< The request is empty */, + ErrorCode_NotAcceptable = 34 /*!< Cannot send a response which is acceptable according to the Accept HTTP header */, + ErrorCode_NullPointer = 35 /*!< Cannot handle a NULL pointer */, + ErrorCode_DatabaseUnavailable = 36 /*!< The database is currently not available (probably a transient situation) */, + ErrorCode_SQLiteNotOpened = 1000 /*!< SQLite: The database is not opened */, + ErrorCode_SQLiteAlreadyOpened = 1001 /*!< SQLite: Connection is already open */, + ErrorCode_SQLiteCannotOpen = 1002 /*!< SQLite: Unable to open the database */, + ErrorCode_SQLiteStatementAlreadyUsed = 1003 /*!< SQLite: This cached statement is already being referred to */, + ErrorCode_SQLiteExecute = 1004 /*!< SQLite: Cannot execute a command */, + ErrorCode_SQLiteRollbackWithoutTransaction = 1005 /*!< SQLite: Rolling back a nonexistent transaction (have you called Begin()?) */, + ErrorCode_SQLiteCommitWithoutTransaction = 1006 /*!< SQLite: Committing a nonexistent transaction */, + ErrorCode_SQLiteRegisterFunction = 1007 /*!< SQLite: Unable to register a function */, + ErrorCode_SQLiteFlush = 1008 /*!< SQLite: Unable to flush the database */, + ErrorCode_SQLiteCannotRun = 1009 /*!< SQLite: Cannot run a cached statement */, + ErrorCode_SQLiteCannotStep = 1010 /*!< SQLite: Cannot step over a cached statement */, + ErrorCode_SQLiteBindOutOfRange = 1011 /*!< SQLite: Bing a value while out of range (serious error) */, + ErrorCode_SQLitePrepareStatement = 1012 /*!< SQLite: Cannot prepare a cached statement */, + ErrorCode_SQLiteTransactionAlreadyStarted = 1013 /*!< SQLite: Beginning the same transaction twice */, + ErrorCode_SQLiteTransactionCommit = 1014 /*!< SQLite: Failure when committing the transaction */, + ErrorCode_SQLiteTransactionBegin = 1015 /*!< SQLite: Cannot start a transaction */, + ErrorCode_DirectoryOverFile = 2000 /*!< The directory to be created is already occupied by a regular file */, + ErrorCode_FileStorageCannotWrite = 2001 /*!< Unable to create a subdirectory or a file in the file storage */, + ErrorCode_DirectoryExpected = 2002 /*!< The specified path does not point to a directory */, + ErrorCode_HttpPortInUse = 2003 /*!< The TCP port of the HTTP server is privileged or already in use */, + ErrorCode_DicomPortInUse = 2004 /*!< The TCP port of the DICOM server is privileged or already in use */, + ErrorCode_BadHttpStatusInRest = 2005 /*!< This HTTP status is not allowed in a REST API */, + ErrorCode_RegularFileExpected = 2006 /*!< The specified path does not point to a regular file */, + ErrorCode_PathToExecutable = 2007 /*!< Unable to get the path to the executable */, + ErrorCode_MakeDirectory = 2008 /*!< Cannot create a directory */, + ErrorCode_BadApplicationEntityTitle = 2009 /*!< An application entity title (AET) cannot be empty or be longer than 16 characters */, + ErrorCode_NoCFindHandler = 2010 /*!< No request handler factory for DICOM C-FIND SCP */, + ErrorCode_NoCMoveHandler = 2011 /*!< No request handler factory for DICOM C-MOVE SCP */, + ErrorCode_NoCStoreHandler = 2012 /*!< No request handler factory for DICOM C-STORE SCP */, + ErrorCode_NoApplicationEntityFilter = 2013 /*!< No application entity filter */, + ErrorCode_NoSopClassOrInstance = 2014 /*!< DicomUserConnection: Unable to find the SOP class and instance */, + ErrorCode_NoPresentationContext = 2015 /*!< DicomUserConnection: No acceptable presentation context for modality */, + ErrorCode_DicomFindUnavailable = 2016 /*!< DicomUserConnection: The C-FIND command is not supported by the remote SCP */, + ErrorCode_DicomMoveUnavailable = 2017 /*!< DicomUserConnection: The C-MOVE command is not supported by the remote SCP */, + ErrorCode_CannotStoreInstance = 2018 /*!< Cannot store an instance */, + ErrorCode_CreateDicomNotString = 2019 /*!< Only string values are supported when creating DICOM instances */, + ErrorCode_CreateDicomOverrideTag = 2020 /*!< Trying to override a value inherited from a parent module */, + ErrorCode_CreateDicomUseContent = 2021 /*!< Use \"Content\" to inject an image into a new DICOM instance */, + ErrorCode_CreateDicomNoPayload = 2022 /*!< No payload is present for one instance in the series */, + ErrorCode_CreateDicomUseDataUriScheme = 2023 /*!< The payload of the DICOM instance must be specified according to Data URI scheme */, + ErrorCode_CreateDicomBadParent = 2024 /*!< Trying to attach a new DICOM instance to an inexistent resource */, + ErrorCode_CreateDicomParentIsInstance = 2025 /*!< Trying to attach a new DICOM instance to an instance (must be a series, study or patient) */, + ErrorCode_CreateDicomParentEncoding = 2026 /*!< Unable to get the encoding of the parent resource */, + ErrorCode_UnknownModality = 2027 /*!< Unknown modality */, + ErrorCode_BadJobOrdering = 2028 /*!< Bad ordering of filters in a job */, + ErrorCode_JsonToLuaTable = 2029 /*!< Cannot convert the given JSON object to a Lua table */, + ErrorCode_CannotCreateLua = 2030 /*!< Cannot create the Lua context */, + ErrorCode_CannotExecuteLua = 2031 /*!< Cannot execute a Lua command */, + ErrorCode_LuaAlreadyExecuted = 2032 /*!< Arguments cannot be pushed after the Lua function is executed */, + ErrorCode_LuaBadOutput = 2033 /*!< The Lua function does not give the expected number of outputs */, + ErrorCode_NotLuaPredicate = 2034 /*!< The Lua function is not a predicate (only true/false outputs allowed) */, + ErrorCode_LuaReturnsNoString = 2035 /*!< The Lua function does not return a string */, + ErrorCode_StorageAreaAlreadyRegistered = 2036 /*!< Another plugin has already registered a custom storage area */, + ErrorCode_DatabaseBackendAlreadyRegistered = 2037 /*!< Another plugin has already registered a custom database back-end */, + ErrorCode_DatabaseNotInitialized = 2038 /*!< Plugin trying to call the database during its initialization */, + ErrorCode_SslDisabled = 2039 /*!< Orthanc has been built without SSL support */, + ErrorCode_CannotOrderSlices = 2040 /*!< Unable to order the slices of the series */, + ErrorCode_NoWorklistHandler = 2041 /*!< No request handler factory for DICOM C-Find Modality SCP */, + ErrorCode_AlreadyExistingTag = 2042 /*!< Cannot override the value of a tag that already exists */, + ErrorCode_START_PLUGINS = 1000000 + }; + + enum LogLevel + { + LogLevel_Error, + LogLevel_Warning, + LogLevel_Info, + LogLevel_Trace + }; + + + /** + * {summary}{The memory layout of the pixels (resp. voxels) of a 2D (resp. 3D) image.} + **/ + enum PixelFormat + { + /** + * {summary}{Color image in RGB24 format.} + * {description}{This format describes a color image. The pixels are stored in 3 + * consecutive bytes. The memory layout is RGB.} + **/ + PixelFormat_RGB24 = 1, + + /** + * {summary}{Color image in RGBA32 format.} + * {description}{This format describes a color image. The pixels are stored in 4 + * consecutive bytes. The memory layout is RGBA.} + **/ + PixelFormat_RGBA32 = 2, + + /** + * {summary}{Graylevel 8bpp image.} + * {description}{The image is graylevel. Each pixel is unsigned and stored in one byte.} + **/ + PixelFormat_Grayscale8 = 3, + + /** + * {summary}{Graylevel, unsigned 16bpp image.} + * {description}{The image is graylevel. Each pixel is unsigned and stored in two bytes.} + **/ + PixelFormat_Grayscale16 = 4, + + /** + * {summary}{Graylevel, signed 16bpp image.} + * {description}{The image is graylevel. Each pixel is signed and stored in two bytes.} + **/ + PixelFormat_SignedGrayscale16 = 5, + + /** + * {summary}{Graylevel, floating-point image.} + * {description}{The image is graylevel. Each pixel is floating-point and stored in 4 bytes.} + **/ + PixelFormat_Float32 = 6, + + // This is the memory layout for Cairo (for internal use in Stone of Orthanc) + PixelFormat_BGRA32 = 7, + + /** + * {summary}{Graylevel, unsigned 32bpp image.} + * {description}{The image is graylevel. Each pixel is unsigned and stored in 4 bytes.} + **/ + PixelFormat_Grayscale32 = 8, + + /** + * {summary}{Color image in RGB48 format.} + * {description}{This format describes a color image. The pixels are stored in 6 + * consecutive bytes. The memory layout is RGB.} + **/ + PixelFormat_RGB48 = 9 + }; + + + /** + * {summary}{The extraction mode specifies the way the values of the pixels are scaled when downloading a 2D image.} + **/ + enum ImageExtractionMode + { + /** + * {summary}{Rescaled to 8bpp.} + * {description}{The minimum value of the image is set to 0, and its maximum value is set to 255.} + **/ + ImageExtractionMode_Preview = 1, + + /** + * {summary}{Truncation to the [0, 255] range.} + **/ + ImageExtractionMode_UInt8 = 2, + + /** + * {summary}{Truncation to the [0, 65535] range.} + **/ + ImageExtractionMode_UInt16 = 3, + + /** + * {summary}{Truncation to the [-32768, 32767] range.} + **/ + ImageExtractionMode_Int16 = 4 + }; + + + /** + * Most common, non-joke and non-experimental HTTP status codes + * http://en.wikipedia.org/wiki/List_of_HTTP_status_codes + **/ + enum HttpStatus + { + HttpStatus_None = -1, + + // 1xx Informational + HttpStatus_100_Continue = 100, + HttpStatus_101_SwitchingProtocols = 101, + HttpStatus_102_Processing = 102, + + // 2xx Success + HttpStatus_200_Ok = 200, + HttpStatus_201_Created = 201, + HttpStatus_202_Accepted = 202, + HttpStatus_203_NonAuthoritativeInformation = 203, + HttpStatus_204_NoContent = 204, + HttpStatus_205_ResetContent = 205, + HttpStatus_206_PartialContent = 206, + HttpStatus_207_MultiStatus = 207, + HttpStatus_208_AlreadyReported = 208, + HttpStatus_226_IMUsed = 226, + + // 3xx Redirection + HttpStatus_300_MultipleChoices = 300, + HttpStatus_301_MovedPermanently = 301, + HttpStatus_302_Found = 302, + HttpStatus_303_SeeOther = 303, + HttpStatus_304_NotModified = 304, + HttpStatus_305_UseProxy = 305, + HttpStatus_307_TemporaryRedirect = 307, + + // 4xx Client Error + HttpStatus_400_BadRequest = 400, + HttpStatus_401_Unauthorized = 401, + HttpStatus_402_PaymentRequired = 402, + HttpStatus_403_Forbidden = 403, + HttpStatus_404_NotFound = 404, + HttpStatus_405_MethodNotAllowed = 405, + HttpStatus_406_NotAcceptable = 406, + HttpStatus_407_ProxyAuthenticationRequired = 407, + HttpStatus_408_RequestTimeout = 408, + HttpStatus_409_Conflict = 409, + HttpStatus_410_Gone = 410, + HttpStatus_411_LengthRequired = 411, + HttpStatus_412_PreconditionFailed = 412, + HttpStatus_413_RequestEntityTooLarge = 413, + HttpStatus_414_RequestUriTooLong = 414, + HttpStatus_415_UnsupportedMediaType = 415, + HttpStatus_416_RequestedRangeNotSatisfiable = 416, + HttpStatus_417_ExpectationFailed = 417, + HttpStatus_422_UnprocessableEntity = 422, + HttpStatus_423_Locked = 423, + HttpStatus_424_FailedDependency = 424, + HttpStatus_426_UpgradeRequired = 426, + + // 5xx Server Error + HttpStatus_500_InternalServerError = 500, + HttpStatus_501_NotImplemented = 501, + HttpStatus_502_BadGateway = 502, + HttpStatus_503_ServiceUnavailable = 503, + HttpStatus_504_GatewayTimeout = 504, + HttpStatus_505_HttpVersionNotSupported = 505, + HttpStatus_506_VariantAlsoNegotiates = 506, + HttpStatus_507_InsufficientStorage = 507, + HttpStatus_509_BandwidthLimitExceeded = 509, + HttpStatus_510_NotExtended = 510 + }; + + + enum HttpMethod + { + HttpMethod_Get = 0, + HttpMethod_Post = 1, + HttpMethod_Delete = 2, + HttpMethod_Put = 3 + }; + + + enum ImageFormat + { + ImageFormat_Png = 1 + }; + + + // https://en.wikipedia.org/wiki/HTTP_compression + enum HttpCompression + { + HttpCompression_None, + HttpCompression_Deflate, + HttpCompression_Gzip + }; + + + // Specific Character Sets + // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#sect_C.12.1.1.2 + enum Encoding + { + Encoding_Ascii, + Encoding_Utf8, + Encoding_Latin1, + Encoding_Latin2, + Encoding_Latin3, + Encoding_Latin4, + Encoding_Latin5, // Turkish + Encoding_Cyrillic, + Encoding_Windows1251, // Windows-1251 (commonly used for Cyrillic) + Encoding_Arabic, + Encoding_Greek, + Encoding_Hebrew, + Encoding_Thai, // TIS 620-2533 + Encoding_Japanese, // JIS X 0201 (Shift JIS): Katakana + Encoding_Chinese // GB18030 - Chinese simplified + //Encoding_JapaneseKanji, // Multibyte - JIS X 0208: Kanji + //Encoding_JapaneseSupplementaryKanji, // Multibyte - JIS X 0212: Supplementary Kanji set + //Encoding_Korean, // Multibyte - KS X 1001: Hangul and Hanja + }; + + + // http://dicom.nema.org/medical/dicom/current/output/html/part03.html#sect_C.7.6.3.1.2 + enum PhotometricInterpretation + { + PhotometricInterpretation_ARGB, // Retired + PhotometricInterpretation_CMYK, // Retired + PhotometricInterpretation_HSV, // Retired + PhotometricInterpretation_Monochrome1, + PhotometricInterpretation_Monochrome2, + PhotometricInterpretation_Palette, + PhotometricInterpretation_RGB, + PhotometricInterpretation_YBRFull, + PhotometricInterpretation_YBRFull422, + PhotometricInterpretation_YBRPartial420, + PhotometricInterpretation_YBRPartial422, + PhotometricInterpretation_YBR_ICT, + PhotometricInterpretation_YBR_RCT, + PhotometricInterpretation_Unknown + }; + + enum DicomModule + { + DicomModule_Patient, + DicomModule_Study, + DicomModule_Series, + DicomModule_Instance, + DicomModule_Image + }; + + enum RequestOrigin + { + RequestOrigin_Unknown, + RequestOrigin_DicomProtocol, + RequestOrigin_RestApi, + RequestOrigin_Plugins, + RequestOrigin_Lua + }; + + enum ServerBarrierEvent + { + ServerBarrierEvent_Stop, + ServerBarrierEvent_Reload // SIGHUP signal: reload configuration file + }; + + enum FileMode + { + FileMode_ReadBinary, + FileMode_WriteBinary + }; + + /** + * The value representations Orthanc knows about. They correspond to + * the DICOM 2016b version of the standard. + * http://dicom.nema.org/medical/dicom/current/output/chtml/part05/sect_6.2.html + **/ + enum ValueRepresentation + { + ValueRepresentation_ApplicationEntity = 1, // AE + ValueRepresentation_AgeString = 2, // AS + ValueRepresentation_AttributeTag = 3, // AT (2 x uint16_t) + ValueRepresentation_CodeString = 4, // CS + ValueRepresentation_Date = 5, // DA + ValueRepresentation_DecimalString = 6, // DS + ValueRepresentation_DateTime = 7, // DT + ValueRepresentation_FloatingPointSingle = 8, // FL (float) + ValueRepresentation_FloatingPointDouble = 9, // FD (double) + ValueRepresentation_IntegerString = 10, // IS + ValueRepresentation_LongString = 11, // LO + ValueRepresentation_LongText = 12, // LT + ValueRepresentation_OtherByte = 13, // OB + ValueRepresentation_OtherDouble = 14, // OD + ValueRepresentation_OtherFloat = 15, // OF + ValueRepresentation_OtherLong = 16, // OL + ValueRepresentation_OtherWord = 17, // OW + ValueRepresentation_PersonName = 18, // PN + ValueRepresentation_ShortString = 19, // SH + ValueRepresentation_SignedLong = 20, // SL (int32_t) + ValueRepresentation_Sequence = 21, // SQ + ValueRepresentation_SignedShort = 22, // SS (int16_t) + ValueRepresentation_ShortText = 23, // ST + ValueRepresentation_Time = 24, // TM + ValueRepresentation_UnlimitedCharacters = 25, // UC + ValueRepresentation_UniqueIdentifier = 26, // UI (UID) + ValueRepresentation_UnsignedLong = 27, // UL (uint32_t) + ValueRepresentation_Unknown = 28, // UN + ValueRepresentation_UniversalResource = 29, // UR (URI or URL) + ValueRepresentation_UnsignedShort = 30, // US (uint16_t) + ValueRepresentation_UnlimitedText = 31, // UT + ValueRepresentation_NotSupported // Not supported by Orthanc, or tag not in dictionary + }; + + enum DicomReplaceMode + { + DicomReplaceMode_InsertIfAbsent, + DicomReplaceMode_ThrowIfAbsent, + DicomReplaceMode_IgnoreIfAbsent + }; + + enum DicomToJsonFormat + { + DicomToJsonFormat_Full, + DicomToJsonFormat_Short, + DicomToJsonFormat_Human + }; + + enum DicomToJsonFlags + { + DicomToJsonFlags_IncludeBinary = (1 << 0), + DicomToJsonFlags_IncludePrivateTags = (1 << 1), + DicomToJsonFlags_IncludeUnknownTags = (1 << 2), + DicomToJsonFlags_IncludePixelData = (1 << 3), + DicomToJsonFlags_ConvertBinaryToAscii = (1 << 4), + DicomToJsonFlags_ConvertBinaryToNull = (1 << 5), + + // Some predefined combinations + DicomToJsonFlags_None = 0, + DicomToJsonFlags_Default = (DicomToJsonFlags_IncludeBinary | + DicomToJsonFlags_IncludePixelData | + DicomToJsonFlags_IncludePrivateTags | + DicomToJsonFlags_IncludeUnknownTags | + DicomToJsonFlags_ConvertBinaryToNull) + }; + + enum DicomFromJsonFlags + { + DicomFromJsonFlags_DecodeDataUriScheme = (1 << 0), + DicomFromJsonFlags_GenerateIdentifiers = (1 << 1) + }; + + enum DicomVersion + { + DicomVersion_2008, + DicomVersion_2017c + }; + + enum ModalityManufacturer + { + ModalityManufacturer_Generic, + ModalityManufacturer_GenericNoWildcardInDates, + ModalityManufacturer_GenericNoUniversalWildcard, + ModalityManufacturer_StoreScp, + ModalityManufacturer_ClearCanvas, + ModalityManufacturer_Dcm4Chee, + ModalityManufacturer_Vitrea + }; + + enum DicomRequestType + { + DicomRequestType_Echo, + DicomRequestType_Find, + DicomRequestType_Get, + DicomRequestType_Move, + DicomRequestType_Store + }; + + enum TransferSyntax + { + TransferSyntax_Deflated, + TransferSyntax_Jpeg, + TransferSyntax_Jpeg2000, + TransferSyntax_JpegLossless, + TransferSyntax_Jpip, + TransferSyntax_Mpeg2, + TransferSyntax_Rle + }; + + + /** + * WARNING: Do not change the explicit values in the enumerations + * below this point. This would result in incompatible databases + * between versions of Orthanc! + **/ + + enum CompressionType + { + /** + * Buffer/file that is stored as-is, in a raw fashion, without + * compression. + **/ + CompressionType_None = 1, + + /** + * Buffer that is compressed using the "deflate" algorithm (RFC + * 1951), wrapped inside the zlib data format (RFC 1950), prefixed + * with a "uint64_t" (8 bytes) that encodes the size of the + * uncompressed buffer. If the compressed buffer is empty, its + * represents an empty uncompressed buffer. This format is + * internal to Orthanc. If the 8 first bytes are skipped AND the + * buffer is non-empty, the buffer is compatible with the + * "deflate" HTTP compression. + **/ + CompressionType_ZlibWithSize = 2 + }; + + enum FileContentType + { + // If you add a value below, insert it in "PluginStorageArea" in + // the file "Plugins/Engine/OrthancPlugins.cpp" + FileContentType_Unknown = 0, + FileContentType_Dicom = 1, + FileContentType_DicomAsJson = 2, + + // Make sure that the value "65535" can be stored into this enumeration + FileContentType_StartUser = 1024, + FileContentType_EndUser = 65535 + }; + + enum ResourceType + { + ResourceType_Patient = 1, + ResourceType_Study = 2, + ResourceType_Series = 3, + ResourceType_Instance = 4 + }; + + + const char* EnumerationToString(ErrorCode code); + + const char* EnumerationToString(HttpMethod method); + + const char* EnumerationToString(HttpStatus status); + + const char* EnumerationToString(ResourceType type); + + const char* EnumerationToString(ImageFormat format); + + const char* EnumerationToString(Encoding encoding); + + const char* EnumerationToString(PhotometricInterpretation photometric); + + const char* EnumerationToString(LogLevel level); + + const char* EnumerationToString(RequestOrigin origin); + + const char* EnumerationToString(PixelFormat format); + + const char* EnumerationToString(ModalityManufacturer manufacturer); + + const char* EnumerationToString(DicomRequestType type); + + const char* EnumerationToString(TransferSyntax syntax); + + const char* EnumerationToString(DicomVersion version); + + Encoding StringToEncoding(const char* encoding); + + ResourceType StringToResourceType(const char* type); + + ImageFormat StringToImageFormat(const char* format); + + LogLevel StringToLogLevel(const char* level); + + ValueRepresentation StringToValueRepresentation(const std::string& vr, + bool throwIfUnsupported); + + PhotometricInterpretation StringToPhotometricInterpretation(const char* value); + + ModalityManufacturer StringToModalityManufacturer(const std::string& manufacturer); + + DicomVersion StringToDicomVersion(const std::string& version); + + unsigned int GetBytesPerPixel(PixelFormat format); + + bool GetDicomEncoding(Encoding& encoding, + const char* specificCharacterSet); + + ResourceType GetChildResourceType(ResourceType type); + + ResourceType GetParentResourceType(ResourceType type); + + DicomModule GetModule(ResourceType type); + + const char* GetDicomSpecificCharacterSet(Encoding encoding); + + HttpStatus ConvertErrorCodeToHttpStatus(ErrorCode error); + + bool IsUserContentType(FileContentType type); + + bool IsBinaryValueRepresentation(ValueRepresentation vr); + + Encoding GetDefaultDicomEncoding(); + + void SetDefaultDicomEncoding(Encoding encoding); +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/FileStorage/FileInfo.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,132 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <string> +#include <stdint.h> +#include "../Enumerations.h" + +namespace Orthanc +{ + struct FileInfo + { + private: + std::string uuid_; + FileContentType contentType_; + + uint64_t uncompressedSize_; + std::string uncompressedMD5_; + + CompressionType compressionType_; + uint64_t compressedSize_; + std::string compressedMD5_; + + public: + FileInfo() + { + } + + /** + * Constructor for an uncompressed attachment. + **/ + FileInfo(const std::string& uuid, + FileContentType contentType, + uint64_t size, + const std::string& md5) : + uuid_(uuid), + contentType_(contentType), + uncompressedSize_(size), + uncompressedMD5_(md5), + compressionType_(CompressionType_None), + compressedSize_(size), + compressedMD5_(md5) + { + } + + /** + * Constructor for a compressed attachment. + **/ + FileInfo(const std::string& uuid, + FileContentType contentType, + uint64_t uncompressedSize, + const std::string& uncompressedMD5, + CompressionType compressionType, + uint64_t compressedSize, + const std::string& compressedMD5) : + uuid_(uuid), + contentType_(contentType), + uncompressedSize_(uncompressedSize), + uncompressedMD5_(uncompressedMD5), + compressionType_(compressionType), + compressedSize_(compressedSize), + compressedMD5_(compressedMD5) + { + } + + const std::string& GetUuid() const + { + return uuid_; + } + + FileContentType GetContentType() const + { + return contentType_; + } + + uint64_t GetUncompressedSize() const + { + return uncompressedSize_; + } + + CompressionType GetCompressionType() const + { + return compressionType_; + } + + uint64_t GetCompressedSize() const + { + return compressedSize_; + } + + const std::string& GetCompressedMD5() const + { + return compressedMD5_; + } + + const std::string& GetUncompressedMD5() const + { + return uncompressedMD5_; + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/FileStorage/FilesystemStorage.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,274 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "FilesystemStorage.h" + +// http://stackoverflow.com/questions/1576272/storing-large-number-of-files-in-file-system +// http://stackoverflow.com/questions/446358/storing-a-large-number-of-images + +#include "../Logging.h" +#include "../OrthancException.h" +#include "../Toolbox.h" +#include "../SystemToolbox.h" + +#include <boost/filesystem/fstream.hpp> + + +static std::string ToString(const boost::filesystem::path& p) +{ +#if BOOST_HAS_FILESYSTEM_V3 == 1 + return p.filename().string(); +#else + return p.filename(); +#endif +} + + +namespace Orthanc +{ + boost::filesystem::path FilesystemStorage::GetPath(const std::string& uuid) const + { + namespace fs = boost::filesystem; + + if (!Toolbox::IsUuid(uuid)) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + fs::path path = root_; + + path /= std::string(&uuid[0], &uuid[2]); + path /= std::string(&uuid[2], &uuid[4]); + path /= uuid; + +#if BOOST_HAS_FILESYSTEM_V3 == 1 + path.make_preferred(); +#endif + + return path; + } + + FilesystemStorage::FilesystemStorage(std::string root) + { + //root_ = boost::filesystem::absolute(root).string(); + root_ = root; + + SystemToolbox::MakeDirectory(root); + } + + + + static const char* GetDescriptionInternal(FileContentType content) + { + // This function is for logging only (internal use), a more + // fully-featured version is available in ServerEnumerations.cpp + switch (content) + { + case FileContentType_Unknown: + return "Unknown"; + + case FileContentType_Dicom: + return "DICOM"; + + case FileContentType_DicomAsJson: + return "JSON summary of DICOM"; + + default: + return "User-defined"; + } + } + + + void FilesystemStorage::Create(const std::string& uuid, + const void* content, + size_t size, + FileContentType type) + { + LOG(INFO) << "Creating attachment \"" << uuid << "\" of \"" << GetDescriptionInternal(type) + << "\" type (size: " << (size / (1024 * 1024) + 1) << "MB)"; + + boost::filesystem::path path; + + path = GetPath(uuid); + + if (boost::filesystem::exists(path)) + { + // Extremely unlikely case: This Uuid has already been created + // in the past. + throw OrthancException(ErrorCode_InternalError); + } + + if (boost::filesystem::exists(path.parent_path())) + { + if (!boost::filesystem::is_directory(path.parent_path())) + { + throw OrthancException(ErrorCode_DirectoryOverFile); + } + } + else + { + if (!boost::filesystem::create_directories(path.parent_path())) + { + throw OrthancException(ErrorCode_FileStorageCannotWrite); + } + } + + SystemToolbox::WriteFile(content, size, path.string()); + } + + + void FilesystemStorage::Read(std::string& content, + const std::string& uuid, + FileContentType type) + { + LOG(INFO) << "Reading attachment \"" << uuid << "\" of \"" << GetDescriptionInternal(type) + << "\" content type"; + + content.clear(); + SystemToolbox::ReadFile(content, GetPath(uuid).string()); + } + + + uintmax_t FilesystemStorage::GetSize(const std::string& uuid) const + { + boost::filesystem::path path = GetPath(uuid); + return boost::filesystem::file_size(path); + } + + + + void FilesystemStorage::ListAllFiles(std::set<std::string>& result) const + { + namespace fs = boost::filesystem; + + result.clear(); + + if (fs::exists(root_) && fs::is_directory(root_)) + { + for (fs::recursive_directory_iterator current(root_), end; current != end ; ++current) + { + if (SystemToolbox::IsRegularFile(current->path().string())) + { + try + { + fs::path d = current->path(); + std::string uuid = ToString(d); + if (Toolbox::IsUuid(uuid)) + { + fs::path p0 = d.parent_path().parent_path().parent_path(); + std::string p1 = ToString(d.parent_path().parent_path()); + std::string p2 = ToString(d.parent_path()); + if (p1.length() == 2 && + p2.length() == 2 && + p1 == uuid.substr(0, 2) && + p2 == uuid.substr(2, 2) && + p0 == root_) + { + result.insert(uuid); + } + } + } + catch (fs::filesystem_error) + { + } + } + } + } + } + + + void FilesystemStorage::Clear() + { + namespace fs = boost::filesystem; + typedef std::set<std::string> List; + + List result; + ListAllFiles(result); + + for (List::const_iterator it = result.begin(); it != result.end(); ++it) + { + Remove(*it, FileContentType_Unknown /*ignored in this class*/); + } + } + + + void FilesystemStorage::Remove(const std::string& uuid, + FileContentType type) + { + LOG(INFO) << "Deleting attachment \"" << uuid << "\" of type " << static_cast<int>(type); + + namespace fs = boost::filesystem; + + fs::path p = GetPath(uuid); + + try + { + fs::remove(p); + } + catch (...) + { + // Ignore the error + } + + // Remove the two parent directories, ignoring the error code if + // these directories are not empty + + try + { +#if BOOST_HAS_FILESYSTEM_V3 == 1 + boost::system::error_code err; + fs::remove(p.parent_path(), err); + fs::remove(p.parent_path().parent_path(), err); +#else + fs::remove(p.parent_path()); + fs::remove(p.parent_path().parent_path()); +#endif + } + catch (...) + { + // Ignore the error + } + } + + + uintmax_t FilesystemStorage::GetCapacity() const + { + return boost::filesystem::space(root_).capacity; + } + + uintmax_t FilesystemStorage::GetAvailableSpace() const + { + return boost::filesystem::space(root_).available; + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/FileStorage/FilesystemStorage.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,88 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(ORTHANC_SANDBOXED) +# error The macro ORTHANC_SANDBOXED must be defined +#endif + +#if ORTHANC_SANDBOXED == 1 +# error The class FilesystemStorage cannot be used in sandboxed environments +#endif + +#include "IStorageArea.h" + +#include <stdint.h> +#include <boost/filesystem.hpp> +#include <set> + +namespace Orthanc +{ + class FilesystemStorage : public IStorageArea + { + // TODO REMOVE THIS + friend class FilesystemHttpSender; + friend class FileStorageAccessor; + + private: + boost::filesystem::path root_; + + boost::filesystem::path GetPath(const std::string& uuid) const; + + public: + explicit FilesystemStorage(std::string root); + + virtual void Create(const std::string& uuid, + const void* content, + size_t size, + FileContentType type); + + virtual void Read(std::string& content, + const std::string& uuid, + FileContentType type); + + virtual void Remove(const std::string& uuid, + FileContentType type); + + void ListAllFiles(std::set<std::string>& result) const; + + uintmax_t GetSize(const std::string& uuid) const; + + void Clear(); + + uintmax_t GetCapacity() const; + + uintmax_t GetAvailableSpace() const; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/FileStorage/IStorageArea.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,62 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "../Enumerations.h" + +#include <string> +#include <boost/noncopyable.hpp> + +namespace Orthanc +{ + class IStorageArea : public boost::noncopyable + { + public: + virtual ~IStorageArea() + { + } + + virtual void Create(const std::string& uuid, + const void* content, + size_t size, + FileContentType type) = 0; + + virtual void Read(std::string& content, + const std::string& uuid, + FileContentType type) = 0; + + virtual void Remove(const std::string& uuid, + FileContentType type) = 0; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/FileStorage/StorageAccessor.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,204 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "StorageAccessor.h" + +#include "../Compression/ZlibCompressor.h" +#include "../OrthancException.h" +#include "../Toolbox.h" +#include "../SystemToolbox.h" + +#if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1 +# include "../HttpServer/HttpStreamTranscoder.h" +#endif + +namespace Orthanc +{ + FileInfo StorageAccessor::Write(const void* data, + size_t size, + FileContentType type, + CompressionType compression, + bool storeMd5) + { + std::string uuid = SystemToolbox::GenerateUuid(); + + std::string md5; + + if (storeMd5) + { + Toolbox::ComputeMD5(md5, data, size); + } + + switch (compression) + { + case CompressionType_None: + { + area_.Create(uuid, data, size, type); + return FileInfo(uuid, type, size, md5); + } + + case CompressionType_ZlibWithSize: + { + ZlibCompressor zlib; + + std::string compressed; + zlib.Compress(compressed, data, size); + + std::string compressedMD5; + + if (storeMd5) + { + Toolbox::ComputeMD5(compressedMD5, compressed); + } + + if (compressed.size() > 0) + { + area_.Create(uuid, &compressed[0], compressed.size(), type); + } + else + { + area_.Create(uuid, NULL, 0, type); + } + + return FileInfo(uuid, type, size, md5, + CompressionType_ZlibWithSize, compressed.size(), compressedMD5); + } + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + + void StorageAccessor::Read(std::string& content, + const FileInfo& info) + { + switch (info.GetCompressionType()) + { + case CompressionType_None: + { + area_.Read(content, info.GetUuid(), info.GetContentType()); + break; + } + + case CompressionType_ZlibWithSize: + { + ZlibCompressor zlib; + + std::string compressed; + area_.Read(compressed, info.GetUuid(), info.GetContentType()); + IBufferCompressor::Uncompress(content, zlib, compressed); + break; + } + + default: + { + throw OrthancException(ErrorCode_NotImplemented); + } + } + + // TODO Check the validity of the uncompressed MD5? + } + + + void StorageAccessor::Read(Json::Value& content, + const FileInfo& info) + { + std::string s; + Read(s, info); + + Json::Reader reader; + if (!reader.parse(s, content)) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + } + + +#if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1 + void StorageAccessor::SetupSender(BufferHttpSender& sender, + const FileInfo& info, + const std::string& mime) + { + area_.Read(sender.GetBuffer(), info.GetUuid(), info.GetContentType()); + sender.SetContentType(mime); + + const char* extension; + switch (info.GetContentType()) + { + case FileContentType_Dicom: + extension = ".dcm"; + break; + + case FileContentType_DicomAsJson: + extension = ".json"; + break; + + default: + // Non-standard content type + extension = ""; + } + + sender.SetContentFilename(info.GetUuid() + std::string(extension)); + } +#endif + + +#if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1 + void StorageAccessor::AnswerFile(HttpOutput& output, + const FileInfo& info, + const std::string& mime) + { + BufferHttpSender sender; + SetupSender(sender, info, mime); + + HttpStreamTranscoder transcoder(sender, info.GetCompressionType()); + output.Answer(transcoder); + } +#endif + + +#if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1 + void StorageAccessor::AnswerFile(RestApiOutput& output, + const FileInfo& info, + const std::string& mime) + { + BufferHttpSender sender; + SetupSender(sender, info, mime); + + HttpStreamTranscoder transcoder(sender, info.GetCompressionType()); + output.AnswerStream(transcoder); + } +#endif +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/FileStorage/StorageAccessor.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,120 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(ORTHANC_SANDBOXED) +# error The macro ORTHANC_SANDBOXED must be defined +#endif + +#if ORTHANC_SANDBOXED == 1 +# error The class StorageAccessor cannot be used in sandboxed environments +#endif + +#if !defined(ORTHANC_ENABLE_CIVETWEB) +# error Macro ORTHANC_ENABLE_CIVETWEB must be defined to use this file +#endif + +#if !defined(ORTHANC_ENABLE_MONGOOSE) +# error Macro ORTHANC_ENABLE_MONGOOSE must be defined to use this file +#endif + +#include "IStorageArea.h" +#include "FileInfo.h" + +#if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1 +# include "../HttpServer/BufferHttpSender.h" +# include "../RestApi/RestApiOutput.h" +#endif + +#include <vector> +#include <string> +#include <boost/noncopyable.hpp> +#include <stdint.h> +#include <json/value.h> + +namespace Orthanc +{ + class StorageAccessor : boost::noncopyable + { + private: + IStorageArea& area_; + +#if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1 + void SetupSender(BufferHttpSender& sender, + const FileInfo& info, + const std::string& mime); +#endif + + public: + StorageAccessor(IStorageArea& area) : area_(area) + { + } + + FileInfo Write(const void* data, + size_t size, + FileContentType type, + CompressionType compression, + bool storeMd5); + + FileInfo Write(const std::string& data, + FileContentType type, + CompressionType compression, + bool storeMd5) + { + return Write((data.size() == 0 ? NULL : data.c_str()), + data.size(), type, compression, storeMd5); + } + + void Read(std::string& content, + const FileInfo& info); + + void Read(Json::Value& content, + const FileInfo& info); + + void Remove(const FileInfo& info) + { + area_.Remove(info.GetUuid(), info.GetContentType()); + } + +#if ORTHANC_ENABLE_CIVETWEB == 1 || ORTHANC_ENABLE_MONGOOSE == 1 + void AnswerFile(HttpOutput& output, + const FileInfo& info, + const std::string& mime); + + void AnswerFile(RestApiOutput& output, + const FileInfo& info, + const std::string& mime); +#endif + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/HttpClient.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,845 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "PrecompiledHeaders.h" +#include "HttpClient.h" + +#include "Toolbox.h" +#include "OrthancException.h" +#include "Logging.h" +#include "ChunkedBuffer.h" +#include "SystemToolbox.h" + +#include <string.h> +#include <curl/curl.h> +#include <boost/algorithm/string/predicate.hpp> +#include <boost/thread/mutex.hpp> + + +#if ORTHANC_ENABLE_SSL == 1 +// For OpenSSL initialization and finalization +# include <openssl/conf.h> +# include <openssl/engine.h> +# include <openssl/err.h> +# include <openssl/evp.h> +# include <openssl/ssl.h> +#endif + + +#if ORTHANC_ENABLE_PKCS11 == 1 +# include "Pkcs11.h" +#endif + + +extern "C" +{ + static CURLcode GetHttpStatus(CURLcode code, CURL* curl, long* status) + { + if (code == CURLE_OK) + { + code = curl_easy_getinfo(curl, CURLINFO_RESPONSE_CODE, status); + return code; + } + else + { + *status = 0; + return code; + } + } + + // This is a dummy wrapper function to suppress any OpenSSL-related + // problem in valgrind. Inlining is prevented. +#if defined(__GNUC__) || defined(__clang__) + __attribute__((noinline)) +#endif + static CURLcode OrthancHttpClientPerformSSL(CURL* curl, long* status) + { +#if ORTHANC_ENABLE_SSL == 1 + return GetHttpStatus(curl_easy_perform(curl), curl, status); +#else + LOG(ERROR) << "Orthanc was compiled without SSL support, cannot make HTTPS request"; + throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError); +#endif + } +} + + + +namespace Orthanc +{ + class HttpClient::GlobalParameters + { + private: + boost::mutex mutex_; + bool httpsVerifyPeers_; + std::string httpsCACertificates_; + std::string proxy_; + long timeout_; + + GlobalParameters() : + httpsVerifyPeers_(true), + timeout_(0) + { + } + + public: + // Singleton pattern + static GlobalParameters& GetInstance() + { + static GlobalParameters parameters; + return parameters; + } + + void ConfigureSsl(bool httpsVerifyPeers, + const std::string& httpsCACertificates) + { + boost::mutex::scoped_lock lock(mutex_); + httpsVerifyPeers_ = httpsVerifyPeers; + httpsCACertificates_ = httpsCACertificates; + } + + void GetSslConfiguration(bool& httpsVerifyPeers, + std::string& httpsCACertificates) + { + boost::mutex::scoped_lock lock(mutex_); + httpsVerifyPeers = httpsVerifyPeers_; + httpsCACertificates = httpsCACertificates_; + } + + void SetDefaultProxy(const std::string& proxy) + { + LOG(INFO) << "Setting the default proxy for HTTP client connections: " << proxy; + + { + boost::mutex::scoped_lock lock(mutex_); + proxy_ = proxy; + } + } + + void GetDefaultProxy(std::string& target) + { + boost::mutex::scoped_lock lock(mutex_); + target = proxy_; + } + + void SetDefaultTimeout(long seconds) + { + LOG(INFO) << "Setting the default timeout for HTTP client connections: " << seconds << " seconds"; + + { + boost::mutex::scoped_lock lock(mutex_); + timeout_ = seconds; + } + } + + long GetDefaultTimeout() + { + boost::mutex::scoped_lock lock(mutex_); + return timeout_; + } + +#if ORTHANC_ENABLE_PKCS11 == 1 + bool IsPkcs11Initialized() + { + boost::mutex::scoped_lock lock(mutex_); + return Pkcs11::IsInitialized(); + } + + void InitializePkcs11(const std::string& module, + const std::string& pin, + bool verbose) + { + boost::mutex::scoped_lock lock(mutex_); + Pkcs11::Initialize(module, pin, verbose); + } +#endif + }; + + + struct HttpClient::PImpl + { + CURL* curl_; + struct curl_slist *defaultPostHeaders_; + struct curl_slist *userHeaders_; + }; + + + static void ThrowException(HttpStatus status) + { + switch (status) + { + case HttpStatus_400_BadRequest: + throw OrthancException(ErrorCode_BadRequest); + + case HttpStatus_401_Unauthorized: + case HttpStatus_403_Forbidden: + throw OrthancException(ErrorCode_Unauthorized); + + case HttpStatus_404_NotFound: + throw OrthancException(ErrorCode_UnknownResource); + + default: + throw OrthancException(ErrorCode_NetworkProtocol); + } + } + + + static CURLcode CheckCode(CURLcode code) + { + if (code == CURLE_NOT_BUILT_IN) + { + LOG(ERROR) << "Your libcurl does not contain a required feature, " + << "please recompile Orthanc with -DUSE_SYSTEM_CURL=OFF"; + throw OrthancException(ErrorCode_InternalError); + } + + if (code != CURLE_OK) + { + LOG(ERROR) << "libCURL error: " + std::string(curl_easy_strerror(code)); + throw OrthancException(ErrorCode_NetworkProtocol); + } + + return code; + } + + + static size_t CurlBodyCallback(void *buffer, size_t size, size_t nmemb, void *payload) + { + ChunkedBuffer& target = *(static_cast<ChunkedBuffer*>(payload)); + + size_t length = size * nmemb; + if (length == 0) + { + return 0; + } + else + { + target.AddChunk(buffer, length); + return length; + } + } + + + struct CurlHeaderParameters + { + bool lowerCase_; + HttpClient::HttpHeaders* headers_; + }; + + + static size_t CurlHeaderCallback(void *buffer, size_t size, size_t nmemb, void *payload) + { + CurlHeaderParameters& parameters = *(static_cast<CurlHeaderParameters*>(payload)); + assert(parameters.headers_ != NULL); + + size_t length = size * nmemb; + if (length == 0) + { + return 0; + } + else + { + std::string s(reinterpret_cast<const char*>(buffer), length); + std::size_t colon = s.find(':'); + std::size_t eol = s.find("\r\n"); + if (colon != std::string::npos && + eol != std::string::npos) + { + std::string tmp(s.substr(0, colon)); + + if (parameters.lowerCase_) + { + Toolbox::ToLowerCase(tmp); + } + + std::string key = Toolbox::StripSpaces(tmp); + + if (!key.empty()) + { + std::string value = Toolbox::StripSpaces(s.substr(colon + 1, eol)); + (*parameters.headers_) [key] = value; + } + } + + return length; + } + } + + + void HttpClient::Setup() + { + pimpl_->userHeaders_ = NULL; + pimpl_->defaultPostHeaders_ = NULL; + if ((pimpl_->defaultPostHeaders_ = curl_slist_append(pimpl_->defaultPostHeaders_, "Expect:")) == NULL) + { + throw OrthancException(ErrorCode_NotEnoughMemory); + } + + pimpl_->curl_ = curl_easy_init(); + if (!pimpl_->curl_) + { + curl_slist_free_all(pimpl_->defaultPostHeaders_); + throw OrthancException(ErrorCode_NotEnoughMemory); + } + + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_WRITEFUNCTION, &CurlBodyCallback)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_HEADER, 0)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_FOLLOWLOCATION, 1)); + + // This fixes the "longjmp causes uninitialized stack frame" crash + // that happens on modern Linux versions. + // http://stackoverflow.com/questions/9191668/error-longjmp-causes-uninitialized-stack-frame + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_NOSIGNAL, 1)); + + url_ = ""; + method_ = HttpMethod_Get; + lastStatus_ = HttpStatus_200_Ok; + SetVerbose(false); + timeout_ = GlobalParameters::GetInstance().GetDefaultTimeout(); + GlobalParameters::GetInstance().GetDefaultProxy(proxy_); + GlobalParameters::GetInstance().GetSslConfiguration(verifyPeers_, caCertificates_); + } + + + HttpClient::HttpClient() : + pimpl_(new PImpl), + verifyPeers_(true), + pkcs11Enabled_(false), + headersToLowerCase_(true), + redirectionFollowed_(true) + { + Setup(); + } + + + HttpClient::HttpClient(const WebServiceParameters& service, + const std::string& uri) : + pimpl_(new PImpl), + verifyPeers_(true), + headersToLowerCase_(true), + redirectionFollowed_(true) + { + Setup(); + + if (service.GetUsername().size() != 0 && + service.GetPassword().size() != 0) + { + SetCredentials(service.GetUsername().c_str(), + service.GetPassword().c_str()); + } + + if (!service.GetCertificateFile().empty()) + { + SetClientCertificate(service.GetCertificateFile(), + service.GetCertificateKeyFile(), + service.GetCertificateKeyPassword()); + } + + SetPkcs11Enabled(service.IsPkcs11Enabled()); + + SetUrl(service.GetUrl() + uri); + } + + + HttpClient::~HttpClient() + { + curl_easy_cleanup(pimpl_->curl_); + curl_slist_free_all(pimpl_->defaultPostHeaders_); + ClearHeaders(); + } + + + void HttpClient::SetVerbose(bool isVerbose) + { + isVerbose_ = isVerbose; + + if (isVerbose_) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_VERBOSE, 1)); + } + else + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_VERBOSE, 0)); + } + } + + + void HttpClient::AddHeader(const std::string& key, + const std::string& value) + { + if (key.empty()) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + std::string s = key + ": " + value; + + if ((pimpl_->userHeaders_ = curl_slist_append(pimpl_->userHeaders_, s.c_str())) == NULL) + { + throw OrthancException(ErrorCode_NotEnoughMemory); + } + } + + + void HttpClient::ClearHeaders() + { + if (pimpl_->userHeaders_ != NULL) + { + curl_slist_free_all(pimpl_->userHeaders_); + pimpl_->userHeaders_ = NULL; + } + } + + + bool HttpClient::ApplyInternal(std::string& answerBody, + HttpHeaders* answerHeaders) + { + answerBody.clear(); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_URL, url_.c_str())); + + CurlHeaderParameters headerParameters; + + if (answerHeaders == NULL) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_HEADERFUNCTION, NULL)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_HEADERDATA, NULL)); + } + else + { + headerParameters.lowerCase_ = headersToLowerCase_; + headerParameters.headers_ = answerHeaders; + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_HEADERFUNCTION, &CurlHeaderCallback)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_HEADERDATA, &headerParameters)); + } + +#if ORTHANC_ENABLE_SSL == 1 + // Setup HTTPS-related options + + if (verifyPeers_) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_CAINFO, caCertificates_.c_str())); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_SSL_VERIFYHOST, 2)); // libcurl default is strict verifyhost + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_SSL_VERIFYPEER, 1)); + } + else + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_SSL_VERIFYHOST, 0)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_SSL_VERIFYPEER, 0)); + } +#endif + + // Setup the HTTPS client certificate + if (!clientCertificateFile_.empty() && + pkcs11Enabled_) + { + LOG(ERROR) << "Cannot enable both client certificates and PKCS#11 authentication"; + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + if (pkcs11Enabled_) + { +#if ORTHANC_ENABLE_PKCS11 == 1 + if (GlobalParameters::GetInstance().IsPkcs11Initialized()) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_SSLENGINE, Pkcs11::GetEngineIdentifier())); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_SSLKEYTYPE, "ENG")); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_SSLCERTTYPE, "ENG")); + } + else + { + LOG(ERROR) << "Cannot use PKCS#11 for a HTTPS request, because it has not been initialized"; + throw OrthancException(ErrorCode_BadSequenceOfCalls); + } +#else + LOG(ERROR) << "This version of Orthanc is compiled without support for PKCS#11"; + throw OrthancException(ErrorCode_InternalError); +#endif + } + else if (!clientCertificateFile_.empty()) + { +#if ORTHANC_ENABLE_SSL == 1 + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_SSLCERTTYPE, "PEM")); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_SSLCERT, clientCertificateFile_.c_str())); + + if (!clientCertificateKeyPassword_.empty()) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_KEYPASSWD, clientCertificateKeyPassword_.c_str())); + } + + // NB: If no "clientKeyFile_" is provided, the key must be + // prepended to the certificate file + if (!clientCertificateKeyFile_.empty()) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_SSLKEYTYPE, "PEM")); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_SSLKEY, clientCertificateKeyFile_.c_str())); + } +#else + LOG(ERROR) << "This version of Orthanc is compiled without OpenSSL support, cannot use HTTPS client authentication"; + throw OrthancException(ErrorCode_InternalError); +#endif + } + + // Reset the parameters from previous calls to Apply() + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_HTTPHEADER, pimpl_->userHeaders_)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_HTTPGET, 0L)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_POST, 0L)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_NOBODY, 0L)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_CUSTOMREQUEST, NULL)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_POSTFIELDS, NULL)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_POSTFIELDSIZE, 0L)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_PROXY, NULL)); + + if (redirectionFollowed_) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_FOLLOWLOCATION, 1L)); + } + else + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_FOLLOWLOCATION, 0L)); + } + + // Set timeouts + if (timeout_ <= 0) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_TIMEOUT, 10)); /* default: 10 seconds */ + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_CONNECTTIMEOUT, 10)); /* default: 10 seconds */ + } + else + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_TIMEOUT, timeout_)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_CONNECTTIMEOUT, timeout_)); + } + + if (credentials_.size() != 0) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_USERPWD, credentials_.c_str())); + } + + if (proxy_.size() != 0) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_PROXY, proxy_.c_str())); + } + + switch (method_) + { + case HttpMethod_Get: + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_HTTPGET, 1L)); + break; + + case HttpMethod_Post: + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_POST, 1L)); + + if (pimpl_->userHeaders_ == NULL) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_HTTPHEADER, pimpl_->defaultPostHeaders_)); + } + + break; + + case HttpMethod_Delete: + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_NOBODY, 1L)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_CUSTOMREQUEST, "DELETE")); + break; + + case HttpMethod_Put: + // http://stackoverflow.com/a/7570281/881731: Don't use + // CURLOPT_PUT if there is a body + + // CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_PUT, 1L)); + + curl_easy_setopt(pimpl_->curl_, CURLOPT_CUSTOMREQUEST, "PUT"); /* !!! */ + + if (pimpl_->userHeaders_ == NULL) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_HTTPHEADER, pimpl_->defaultPostHeaders_)); + } + + break; + + default: + throw OrthancException(ErrorCode_InternalError); + } + + + if (method_ == HttpMethod_Post || + method_ == HttpMethod_Put) + { + if (body_.size() > 0) + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_POSTFIELDS, body_.c_str())); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_POSTFIELDSIZE, body_.size())); + } + else + { + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_POSTFIELDS, NULL)); + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_POSTFIELDSIZE, 0)); + } + } + + + // Do the actual request + CURLcode code; + long status = 0; + + ChunkedBuffer buffer; + CheckCode(curl_easy_setopt(pimpl_->curl_, CURLOPT_WRITEDATA, &buffer)); + + if (boost::starts_with(url_, "https://")) + { + code = OrthancHttpClientPerformSSL(pimpl_->curl_, &status); + } + else + { + code = GetHttpStatus(curl_easy_perform(pimpl_->curl_), pimpl_->curl_, &status); + } + + CheckCode(code); + + if (status == 0) + { + // This corresponds to a call to an inexistent host + lastStatus_ = HttpStatus_500_InternalServerError; + } + else + { + lastStatus_ = static_cast<HttpStatus>(status); + } + + bool success = (status >= 200 && status < 300); + + if (success) + { + buffer.Flatten(answerBody); + } + else + { + answerBody.clear(); + LOG(INFO) << "Error in HTTP request, received HTTP status " << status + << " (" << EnumerationToString(lastStatus_) << ")"; + } + + return success; + } + + + bool HttpClient::ApplyInternal(Json::Value& answerBody, + HttpClient::HttpHeaders* answerHeaders) + { + std::string s; + if (ApplyInternal(s, answerHeaders)) + { + Json::Reader reader; + return reader.parse(s, answerBody); + } + else + { + return false; + } + } + + + void HttpClient::SetCredentials(const char* username, + const char* password) + { + credentials_ = std::string(username) + ":" + std::string(password); + } + + + void HttpClient::ConfigureSsl(bool httpsVerifyPeers, + const std::string& httpsVerifyCertificates) + { +#if ORTHANC_ENABLE_SSL == 1 + if (httpsVerifyPeers) + { + if (httpsVerifyCertificates.empty()) + { + LOG(WARNING) << "No certificates are provided to validate peers, " + << "set \"HttpsCACertificates\" if you need to do HTTPS requests"; + } + else + { + LOG(WARNING) << "HTTPS will use the CA certificates from this file: " << httpsVerifyCertificates; + } + } + else + { + LOG(WARNING) << "The verification of the peers in HTTPS requests is disabled"; + } +#endif + + GlobalParameters::GetInstance().ConfigureSsl(httpsVerifyPeers, httpsVerifyCertificates); + } + + + void HttpClient::GlobalInitialize() + { +#if ORTHANC_ENABLE_SSL == 1 + CheckCode(curl_global_init(CURL_GLOBAL_ALL)); +#else + CheckCode(curl_global_init(CURL_GLOBAL_ALL & ~CURL_GLOBAL_SSL)); +#endif + } + + + void HttpClient::GlobalFinalize() + { + curl_global_cleanup(); + +#if ORTHANC_ENABLE_PKCS11 == 1 + Pkcs11::Finalize(); +#endif + } + + + void HttpClient::SetDefaultProxy(const std::string& proxy) + { + GlobalParameters::GetInstance().SetDefaultProxy(proxy); + } + + + void HttpClient::SetDefaultTimeout(long timeout) + { + GlobalParameters::GetInstance().SetDefaultTimeout(timeout); + } + + + void HttpClient::ApplyAndThrowException(std::string& answerBody) + { + if (!Apply(answerBody)) + { + ThrowException(GetLastStatus()); + } + } + + + void HttpClient::ApplyAndThrowException(Json::Value& answerBody) + { + if (!Apply(answerBody)) + { + ThrowException(GetLastStatus()); + } + } + + + void HttpClient::ApplyAndThrowException(std::string& answerBody, + HttpHeaders& answerHeaders) + { + if (!Apply(answerBody, answerHeaders)) + { + ThrowException(GetLastStatus()); + } + } + + + void HttpClient::ApplyAndThrowException(Json::Value& answerBody, + HttpHeaders& answerHeaders) + { + if (!Apply(answerBody, answerHeaders)) + { + ThrowException(GetLastStatus()); + } + } + + + void HttpClient::SetClientCertificate(const std::string& certificateFile, + const std::string& certificateKeyFile, + const std::string& certificateKeyPassword) + { + if (certificateFile.empty()) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + if (!SystemToolbox::IsRegularFile(certificateFile)) + { + LOG(ERROR) << "Cannot open certificate file: " << certificateFile; + throw OrthancException(ErrorCode_InexistentFile); + } + + if (!certificateKeyFile.empty() && + !SystemToolbox::IsRegularFile(certificateKeyFile)) + { + LOG(ERROR) << "Cannot open key file: " << certificateKeyFile; + throw OrthancException(ErrorCode_InexistentFile); + } + + clientCertificateFile_ = certificateFile; + clientCertificateKeyFile_ = certificateKeyFile; + clientCertificateKeyPassword_ = certificateKeyPassword; + } + + + void HttpClient::InitializePkcs11(const std::string& module, + const std::string& pin, + bool verbose) + { +#if ORTHANC_ENABLE_PKCS11 == 1 + LOG(INFO) << "Initializing PKCS#11 using " << module + << (pin.empty() ? " (no PIN provided)" : " (PIN is provided)"); + GlobalParameters::GetInstance().InitializePkcs11(module, pin, verbose); +#else + LOG(ERROR) << "This version of Orthanc is compiled without support for PKCS#11"; + throw OrthancException(ErrorCode_InternalError); +#endif + } + + + void HttpClient::InitializeOpenSsl() + { +#if ORTHANC_ENABLE_SSL == 1 + // https://wiki.openssl.org/index.php/Library_Initialization + SSL_library_init(); + SSL_load_error_strings(); + OpenSSL_add_all_algorithms(); + ERR_load_crypto_strings(); +#endif + } + + + void HttpClient::FinalizeOpenSsl() + { +#if ORTHANC_ENABLE_SSL == 1 + // Finalize OpenSSL + // https://wiki.openssl.org/index.php/Library_Initialization#Cleanup +#ifdef FIPS_mode_set + FIPS_mode_set(0); +#endif + ENGINE_cleanup(); + CONF_modules_unload(1); + EVP_cleanup(); + CRYPTO_cleanup_all_ex_data(); + ERR_remove_state(0); + ERR_free_strings(); +#endif + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/HttpClient.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,296 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "Enumerations.h" +#include "WebServiceParameters.h" + +#include <string> +#include <boost/shared_ptr.hpp> +#include <json/json.h> + +#if !defined(ORTHANC_ENABLE_SSL) +# error The macro ORTHANC_ENABLE_SSL must be defined +#endif + +#if !defined(ORTHANC_ENABLE_PKCS11) +# error The macro ORTHANC_ENABLE_PKCS11 must be defined +#endif + + +namespace Orthanc +{ + class HttpClient + { + public: + typedef std::map<std::string, std::string> HttpHeaders; + + private: + class GlobalParameters; + + struct PImpl; + boost::shared_ptr<PImpl> pimpl_; + + std::string url_; + std::string credentials_; + HttpMethod method_; + HttpStatus lastStatus_; + std::string body_; // This only makes sense for POST and PUT requests + bool isVerbose_; + long timeout_; + std::string proxy_; + bool verifyPeers_; + std::string caCertificates_; + std::string clientCertificateFile_; + std::string clientCertificateKeyFile_; + std::string clientCertificateKeyPassword_; + bool pkcs11Enabled_; + bool headersToLowerCase_; + bool redirectionFollowed_; + + void Setup(); + + void operator= (const HttpClient&); // Assignment forbidden + HttpClient(const HttpClient& base); // Copy forbidden + + bool ApplyInternal(std::string& answerBody, + HttpHeaders* answerHeaders); + + bool ApplyInternal(Json::Value& answerBody, + HttpHeaders* answerHeaders); + + public: + HttpClient(); + + HttpClient(const WebServiceParameters& service, + const std::string& uri); + + ~HttpClient(); + + void SetUrl(const char* url) + { + url_ = std::string(url); + } + + void SetUrl(const std::string& url) + { + url_ = url; + } + + const std::string& GetUrl() const + { + return url_; + } + + void SetMethod(HttpMethod method) + { + method_ = method; + } + + HttpMethod GetMethod() const + { + return method_; + } + + void SetTimeout(long seconds) + { + timeout_ = seconds; + } + + long GetTimeout() const + { + return timeout_; + } + + void SetBody(const std::string& data) + { + body_ = data; + } + + std::string& GetBody() + { + return body_; + } + + const std::string& GetBody() const + { + return body_; + } + + void SetVerbose(bool isVerbose); + + bool IsVerbose() const + { + return isVerbose_; + } + + void AddHeader(const std::string& key, + const std::string& value); + + void ClearHeaders(); + + bool Apply(std::string& answerBody) + { + return ApplyInternal(answerBody, NULL); + } + + bool Apply(Json::Value& answerBody) + { + return ApplyInternal(answerBody, NULL); + } + + bool Apply(std::string& answerBody, + HttpHeaders& answerHeaders) + { + return ApplyInternal(answerBody, &answerHeaders); + } + + bool Apply(Json::Value& answerBody, + HttpHeaders& answerHeaders) + { + return ApplyInternal(answerBody, &answerHeaders); + } + + HttpStatus GetLastStatus() const + { + return lastStatus_; + } + + void SetCredentials(const char* username, + const char* password); + + void SetProxy(const std::string& proxy) + { + proxy_ = proxy; + } + + void SetHttpsVerifyPeers(bool verify) + { + verifyPeers_ = verify; + } + + bool IsHttpsVerifyPeers() const + { + return verifyPeers_; + } + + void SetHttpsCACertificates(const std::string& certificates) + { + caCertificates_ = certificates; + } + + const std::string& GetHttpsCACertificates() const + { + return caCertificates_; + } + + void SetClientCertificate(const std::string& certificateFile, + const std::string& certificateKeyFile, + const std::string& certificateKeyPassword); + + void SetPkcs11Enabled(bool enabled) + { + pkcs11Enabled_ = enabled; + } + + bool IsPkcs11Enabled() const + { + return pkcs11Enabled_; + } + + const std::string& GetClientCertificateFile() const + { + return clientCertificateFile_; + } + + const std::string& GetClientCertificateKeyFile() const + { + return clientCertificateKeyFile_; + } + + const std::string& GetClientCertificateKeyPassword() const + { + return clientCertificateKeyPassword_; + } + + void SetConvertHeadersToLowerCase(bool lowerCase) + { + headersToLowerCase_ = lowerCase; + } + + bool IsConvertHeadersToLowerCase() const + { + return headersToLowerCase_; + } + + void SetRedirectionFollowed(bool follow) + { + redirectionFollowed_ = follow; + } + + bool IsRedirectionFollowed() const + { + return redirectionFollowed_; + } + + static void GlobalInitialize(); + + static void GlobalFinalize(); + + static void InitializeOpenSsl(); + + static void FinalizeOpenSsl(); + + static void InitializePkcs11(const std::string& module, + const std::string& pin, + bool verbose); + + static void ConfigureSsl(bool httpsVerifyPeers, + const std::string& httpsCACertificates); + + static void SetDefaultProxy(const std::string& proxy); + + static void SetDefaultTimeout(long timeout); + + void ApplyAndThrowException(std::string& answerBody); + + void ApplyAndThrowException(Json::Value& answerBody); + + void ApplyAndThrowException(std::string& answerBody, + HttpHeaders& answerHeaders); + + void ApplyAndThrowException(Json::Value& answerBody, + HttpHeaders& answerHeaders); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/ICommand.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,49 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "IDynamicObject.h" + +namespace Orthanc +{ + /** + * This class is the base class for the "Command" design pattern. + * http://en.wikipedia.org/wiki/Command_pattern + **/ + class ICommand : public IDynamicObject + { + public: + virtual bool Execute() = 0; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/IDynamicObject.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,53 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <boost/noncopyable.hpp> + +namespace Orthanc +{ + /** + * This class should be the ancestor to any class whose type is + * determined at the runtime, and that can be dynamically allocated. + * Being a child of IDynamicObject only implies the existence of a + * virtual destructor. + **/ + class IDynamicObject : public boost::noncopyable + { + public: + virtual ~IDynamicObject() + { + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/Font.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,318 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "Font.h" + +#if !defined(ORTHANC_ENABLE_LOCALE) +# error ORTHANC_ENABLE_LOCALE must be defined to use this file +#endif + +#if ORTHANC_SANDBOXED == 0 +# include "../SystemToolbox.h" +#endif + +#include "../Toolbox.h" +#include "../OrthancException.h" + +#include <stdio.h> +#include <memory> +#include <boost/lexical_cast.hpp> + +namespace Orthanc +{ + Font::~Font() + { + for (Characters::iterator it = characters_.begin(); + it != characters_.end(); ++it) + { + delete it->second; + } + } + + + void Font::LoadFromMemory(const std::string& font) + { + Json::Value v; + Json::Reader reader; + if (!reader.parse(font, v) || + v.type() != Json::objectValue || + !v.isMember("Name") || + !v.isMember("Size") || + !v.isMember("Characters") || + v["Name"].type() != Json::stringValue || + v["Size"].type() != Json::intValue || + v["Characters"].type() != Json::objectValue) + { + throw OrthancException(ErrorCode_BadFont); + } + + name_ = v["Name"].asString(); + size_ = v["Size"].asUInt(); + maxHeight_ = 0; + + Json::Value::Members characters = v["Characters"].getMemberNames(); + + for (size_t i = 0; i < characters.size(); i++) + { + const Json::Value& info = v["Characters"][characters[i]]; + if (info.type() != Json::objectValue || + !info.isMember("Advance") || + !info.isMember("Bitmap") || + !info.isMember("Height") || + !info.isMember("Top") || + !info.isMember("Width") || + info["Advance"].type() != Json::intValue || + info["Bitmap"].type() != Json::arrayValue || + info["Height"].type() != Json::intValue || + info["Top"].type() != Json::intValue || + info["Width"].type() != Json::intValue) + { + throw OrthancException(ErrorCode_BadFont); + } + + std::auto_ptr<Character> c(new Character); + + c->advance_ = info["Advance"].asUInt(); + c->height_ = info["Height"].asUInt(); + c->top_ = info["Top"].asUInt(); + c->width_ = info["Width"].asUInt(); + c->bitmap_.resize(info["Bitmap"].size()); + + if (c->height_ > maxHeight_) + { + maxHeight_ = c->height_; + } + + for (Json::Value::ArrayIndex j = 0; j < info["Bitmap"].size(); j++) + { + if (info["Bitmap"][j].type() != Json::intValue) + { + throw OrthancException(ErrorCode_BadFont); + } + + int value = info["Bitmap"][j].asInt(); + if (value < 0 || value > 255) + { + throw OrthancException(ErrorCode_BadFont); + } + + c->bitmap_[j] = static_cast<uint8_t>(value); + } + + int index = boost::lexical_cast<int>(characters[i]); + if (index < 0 || index > 255) + { + throw OrthancException(ErrorCode_BadFont); + } + + characters_[static_cast<char>(index)] = c.release(); + } + } + + +#if ORTHANC_SANDBOXED == 0 + void Font::LoadFromFile(const std::string& path) + { + std::string font; + SystemToolbox::ReadFile(font, path); + LoadFromMemory(font); + } +#endif + + + static unsigned int MyMin(unsigned int a, + unsigned int b) + { + return a < b ? a : b; + } + + + void Font::DrawCharacter(ImageAccessor& target, + const Character& character, + int x, + int y, + const uint8_t color[4]) const + { + // Compute the bounds of the character + if (x >= static_cast<int>(target.GetWidth()) || + y >= static_cast<int>(target.GetHeight())) + { + // The character is out of the image + return; + } + + unsigned int left = x < 0 ? -x : 0; + unsigned int top = y < 0 ? -y : 0; + unsigned int width = MyMin(character.width_, target.GetWidth() - x); + unsigned int height = MyMin(character.height_, target.GetHeight() - y); + + unsigned int bpp = target.GetBytesPerPixel(); + + // Blit the font bitmap OVER the target image + // https://en.wikipedia.org/wiki/Alpha_compositing + + for (unsigned int cy = top; cy < height; cy++) + { + uint8_t* p = reinterpret_cast<uint8_t*>(target.GetRow(y + cy)) + (x + left) * bpp; + unsigned int pos = cy * character.width_ + left; + + switch (target.GetFormat()) + { + case PixelFormat_Grayscale8: + { + assert(bpp == 1); + for (unsigned int cx = left; cx < width; cx++, pos++, p++) + { + uint16_t alpha = character.bitmap_[pos]; + uint16_t value = alpha * static_cast<uint16_t>(color[0]) + (255 - alpha) * static_cast<uint16_t>(*p); + *p = static_cast<uint8_t>(value >> 8); + } + + break; + } + + case PixelFormat_RGB24: + { + assert(bpp == 3); + for (unsigned int cx = left; cx < width; cx++, pos++, p += 3) + { + uint16_t alpha = character.bitmap_[pos]; + for (uint8_t i = 0; i < 3; i++) + { + uint16_t value = alpha * static_cast<uint16_t>(color[i]) + (255 - alpha) * static_cast<uint16_t>(p[i]); + p[i] = static_cast<uint8_t>(value >> 8); + } + } + + break; + } + + case PixelFormat_RGBA32: + { + assert(bpp == 4); + + for (unsigned int cx = left; cx < width; cx++, pos++, p += 4) + { + float alpha = static_cast<float>(character.bitmap_[pos]) / 255.0f; + float beta = (1.0f - alpha) * static_cast<float>(p[3]) / 255.0f; + float denom = 1.0f / (alpha + beta); + + for (uint8_t i = 0; i < 3; i++) + { + p[i] = static_cast<uint8_t>((alpha * static_cast<float>(color[i]) + + beta * static_cast<float>(p[i])) * denom); + } + + p[3] = static_cast<uint8_t>(255.0f * (alpha + beta)); + } + + break; + } + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + } + + + void Font::DrawInternal(ImageAccessor& target, + const std::string& utf8, + int x, + int y, + const uint8_t color[4]) const + { + if (target.GetFormat() != PixelFormat_Grayscale8 && + target.GetFormat() != PixelFormat_RGB24 && + target.GetFormat() != PixelFormat_RGBA32) + { + throw OrthancException(ErrorCode_NotImplemented); + } + + int a = x; + +#if ORTHANC_ENABLE_LOCALE == 1 + std::string s = Toolbox::ConvertFromUtf8(utf8, Encoding_Latin1); +#else + // If the locale support is disabled, simply drop non-ASCII + // characters from the source UTF-8 string + std::string s = Toolbox::ConvertToAscii(utf8); +#endif + + for (size_t i = 0; i < s.size(); i++) + { + if (s[i] == '\n') + { + // Go to the next line + a = x; + y += maxHeight_ + 1; + } + else + { + Characters::const_iterator c = characters_.find(s[i]); + if (c != characters_.end()) + { + DrawCharacter(target, *c->second, a, y + static_cast<int>(c->second->top_), color); + a += c->second->advance_; + } + } + } + } + + + void Font::Draw(ImageAccessor& target, + const std::string& utf8, + int x, + int y, + uint8_t grayscale) const + { + uint8_t color[4] = { grayscale, grayscale, grayscale, 255 }; + DrawInternal(target, utf8, x, y, color); + } + + + void Font::Draw(ImageAccessor& target, + const std::string& utf8, + int x, + int y, + uint8_t r, + uint8_t g, + uint8_t b) const + { + uint8_t color[4] = { r, g, b, 255 }; + DrawInternal(target, utf8, x, y, color); + } + +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/Font.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,115 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "ImageAccessor.h" + +#include <stdint.h> +#include <vector> +#include <map> +#include <boost/noncopyable.hpp> + +namespace Orthanc +{ + class Font : public boost::noncopyable + { + private: + struct Character + { + unsigned int width_; + unsigned int height_; + unsigned int top_; + unsigned int advance_; + std::vector<uint8_t> bitmap_; + }; + + typedef std::map<char, Character*> Characters; + + std::string name_; + unsigned int size_; + Characters characters_; + unsigned int maxHeight_; + + void DrawCharacter(ImageAccessor& target, + const Character& character, + int x, + int y, + const uint8_t color[4]) const; + + void DrawInternal(ImageAccessor& target, + const std::string& utf8, + int x, + int y, + const uint8_t color[4]) const; + + public: + Font() : + size_(0), + maxHeight_(0) + { + } + + ~Font(); + + void LoadFromMemory(const std::string& font); + +#if ORTHANC_SANDBOXED == 0 + void LoadFromFile(const std::string& path); +#endif + + const std::string& GetName() const + { + return name_; + } + + unsigned int GetSize() const + { + return size_; + } + + void Draw(ImageAccessor& target, + const std::string& utf8, + int x, + int y, + uint8_t grayscale) const; + + void Draw(ImageAccessor& target, + const std::string& utf8, + int x, + int y, + uint8_t r, + uint8_t g, + uint8_t b) const; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/FontRegistry.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,91 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "FontRegistry.h" + +#include "../OrthancException.h" + +#include <memory> + +namespace Orthanc +{ + FontRegistry::~FontRegistry() + { + for (Fonts::iterator it = fonts_.begin(); it != fonts_.end(); ++it) + { + delete *it; + } + } + + + void FontRegistry::AddFromMemory(const std::string& font) + { + std::auto_ptr<Font> f(new Font); + f->LoadFromMemory(font); + fonts_.push_back(f.release()); + } + + +#if ORTHANC_SANDBOXED == 0 + void FontRegistry::AddFromFile(const std::string& path) + { + std::auto_ptr<Font> f(new Font); + f->LoadFromFile(path); + fonts_.push_back(f.release()); + } +#endif + + +#if ORTHANC_HAS_EMBEDDED_RESOURCES == 1 + void FontRegistry::AddFromResource(EmbeddedResources::FileResourceId resource) + { + std::string content; + EmbeddedResources::GetFileResource(content, resource); + AddFromMemory(content); + } +#endif + + + const Font& FontRegistry::GetFont(size_t i) const + { + if (i >= fonts_.size()) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + else + { + return *fonts_[i]; + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/FontRegistry.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,75 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "Font.h" + +#if !defined(ORTHANC_HAS_EMBEDDED_RESOURCES) +# error Macro ORTHANC_HAS_EMBEDDED_RESOURCES must be defined +#endif + +#if ORTHANC_HAS_EMBEDDED_RESOURCES == 1 +# include <EmbeddedResources.h> // Autogenerated file +#endif + +namespace Orthanc +{ + class FontRegistry : public boost::noncopyable + { + private: + typedef std::vector<Font*> Fonts; + + Fonts fonts_; + + public: + ~FontRegistry(); + + void AddFromMemory(const std::string& font); + +#if ORTHANC_SANDBOXED == 0 + void AddFromFile(const std::string& path); +#endif + +#if ORTHANC_HAS_EMBEDDED_RESOURCES == 1 + void AddFromResource(EmbeddedResources::FileResourceId resource); +#endif + + size_t GetSize() const + { + return fonts_.size(); + } + + const Font& GetFont(size_t i) const; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/IImageWriter.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,55 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "IImageWriter.h" + +#if ORTHANC_SANDBOXED == 0 +# include "../SystemToolbox.h" +#endif + +namespace Orthanc +{ +#if ORTHANC_SANDBOXED == 0 + void IImageWriter::WriteToFileInternal(const std::string& path, + unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer) + { + std::string compressed; + WriteToMemoryInternal(compressed, width, height, pitch, format, buffer); + SystemToolbox::WriteFile(compressed, path); + } +#endif +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/IImageWriter.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,86 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "ImageAccessor.h" + +#include <boost/noncopyable.hpp> + +#if !defined(ORTHANC_SANDBOXED) +# error The macro ORTHANC_SANDBOXED must be defined +#endif + +namespace Orthanc +{ + class IImageWriter : public boost::noncopyable + { + protected: + virtual void WriteToMemoryInternal(std::string& compressed, + unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer) = 0; + +#if ORTHANC_SANDBOXED == 0 + virtual void WriteToFileInternal(const std::string& path, + unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer); +#endif + + public: + virtual ~IImageWriter() + { + } + + virtual void WriteToMemory(std::string& compressed, + const ImageAccessor& accessor) + { + WriteToMemoryInternal(compressed, accessor.GetWidth(), accessor.GetHeight(), + accessor.GetPitch(), accessor.GetFormat(), accessor.GetConstBuffer()); + } + +#if ORTHANC_SANDBOXED == 0 + virtual void WriteToFile(const std::string& path, + const ImageAccessor& accessor) + { + WriteToFileInternal(path, accessor.GetWidth(), accessor.GetHeight(), + accessor.GetPitch(), accessor.GetFormat(), accessor.GetConstBuffer()); + } +#endif + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/Image.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,59 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "Image.h" + +#include "ImageProcessing.h" + +#include <memory> + +namespace Orthanc +{ + Image::Image(PixelFormat format, + unsigned int width, + unsigned int height, + bool forceMinimalPitch) : + image_(format, width, height, forceMinimalPitch) + { + ImageAccessor accessor = image_.GetAccessor(); + AssignWritable(format, width, height, accessor.GetPitch(), accessor.GetBuffer()); + } + + + Image* Image::Clone(const ImageAccessor& source) + { + std::auto_ptr<Image> target(new Image(source.GetFormat(), source.GetWidth(), source.GetHeight(), false)); + ImageProcessing::Copy(*target, source); + return target.release(); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/Image.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,54 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "ImageAccessor.h" +#include "ImageBuffer.h" + +namespace Orthanc +{ + class Image : public ImageAccessor + { + private: + ImageBuffer image_; + + public: + Image(PixelFormat format, + unsigned int width, + unsigned int height, + bool forceMinimalPitch); + + static Image* Clone(const ImageAccessor& source); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/ImageAccessor.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,301 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "ImageAccessor.h" + +#include "../Logging.h" +#include "../OrthancException.h" +#include "../ChunkedBuffer.h" + +#include <stdint.h> +#include <cassert> +#include <boost/lexical_cast.hpp> + + + +namespace Orthanc +{ + template <typename PixelType> + static void ToMatlabStringInternal(ChunkedBuffer& target, + const ImageAccessor& source) + { + target.AddChunk("double([ "); + + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const PixelType* p = reinterpret_cast<const PixelType*>(source.GetConstRow(y)); + + std::string s; + if (y > 0) + { + s = "; "; + } + + s.reserve(source.GetWidth() * 8); + + for (unsigned int x = 0; x < source.GetWidth(); x++, p++) + { + s += boost::lexical_cast<std::string>(static_cast<double>(*p)) + " "; + } + + target.AddChunk(s); + } + + target.AddChunk("])"); + } + + + static void RGB24ToMatlabString(ChunkedBuffer& target, + const ImageAccessor& source) + { + assert(source.GetFormat() == PixelFormat_RGB24); + + target.AddChunk("double(permute(reshape([ "); + + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const uint8_t* p = reinterpret_cast<const uint8_t*>(source.GetConstRow(y)); + + std::string s; + s.reserve(source.GetWidth() * 3 * 8); + + for (unsigned int x = 0; x < 3 * source.GetWidth(); x++, p++) + { + s += boost::lexical_cast<std::string>(static_cast<int>(*p)) + " "; + } + + target.AddChunk(s); + } + + target.AddChunk("], [ 3 " + boost::lexical_cast<std::string>(source.GetHeight()) + + " " + boost::lexical_cast<std::string>(source.GetWidth()) + " ]), [ 3 2 1 ]))"); + } + + + void* ImageAccessor::GetBuffer() const + { + if (readOnly_) + { +#if ORTHANC_ENABLE_LOGGING == 1 + LOG(ERROR) << "Trying to write on a read-only image"; +#endif + + throw OrthancException(ErrorCode_ReadOnly); + } + + return buffer_; + } + + + const void* ImageAccessor::GetConstRow(unsigned int y) const + { + if (buffer_ != NULL) + { + return buffer_ + y * pitch_; + } + else + { + return NULL; + } + } + + + void* ImageAccessor::GetRow(unsigned int y) const + { + if (readOnly_) + { +#if ORTHANC_ENABLE_LOGGING == 1 + LOG(ERROR) << "Trying to write on a read-only image"; +#endif + + throw OrthancException(ErrorCode_ReadOnly); + } + + if (buffer_ != NULL) + { + return buffer_ + y * pitch_; + } + else + { + return NULL; + } + } + + + void ImageAccessor::AssignEmpty(PixelFormat format) + { + readOnly_ = false; + format_ = format; + width_ = 0; + height_ = 0; + pitch_ = 0; + buffer_ = NULL; + } + + + void ImageAccessor::AssignReadOnly(PixelFormat format, + unsigned int width, + unsigned int height, + unsigned int pitch, + const void *buffer) + { + readOnly_ = true; + format_ = format; + width_ = width; + height_ = height; + pitch_ = pitch; + buffer_ = reinterpret_cast<uint8_t*>(const_cast<void*>(buffer)); + + if (GetBytesPerPixel() * width_ > pitch_) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + void ImageAccessor::AssignWritable(PixelFormat format, + unsigned int width, + unsigned int height, + unsigned int pitch, + void *buffer) + { + readOnly_ = false; + format_ = format; + width_ = width; + height_ = height; + pitch_ = pitch; + buffer_ = reinterpret_cast<uint8_t*>(buffer); + + if (GetBytesPerPixel() * width_ > pitch_) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + } + + + void ImageAccessor::ToMatlabString(std::string& target) const + { + ChunkedBuffer buffer; + + switch (GetFormat()) + { + case PixelFormat_Grayscale8: + ToMatlabStringInternal<uint8_t>(buffer, *this); + break; + + case PixelFormat_Grayscale16: + ToMatlabStringInternal<uint16_t>(buffer, *this); + break; + + case PixelFormat_Grayscale32: + ToMatlabStringInternal<uint32_t>(buffer, *this); + break; + + case PixelFormat_SignedGrayscale16: + ToMatlabStringInternal<int16_t>(buffer, *this); + break; + + case PixelFormat_Float32: + ToMatlabStringInternal<float>(buffer, *this); + break; + + case PixelFormat_RGB24: + RGB24ToMatlabString(buffer, *this); + break; + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + + buffer.Flatten(target); + } + + + + ImageAccessor ImageAccessor::GetRegion(unsigned int x, + unsigned int y, + unsigned int width, + unsigned int height) const + { + if (x + width > width_ || + y + height > height_) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + ImageAccessor result; + + if (width == 0 || + height == 0) + { + result.AssignWritable(format_, 0, 0, 0, NULL); + } + else + { + uint8_t* p = (buffer_ + + y * pitch_ + + x * GetBytesPerPixel()); + + if (readOnly_) + { + result.AssignReadOnly(format_, width, height, pitch_, p); + } + else + { + result.AssignWritable(format_, width, height, pitch_, p); + } + } + + return result; + } + + + void ImageAccessor::SetFormat(PixelFormat format) + { + if (readOnly_) + { +#if ORTHANC_ENABLE_LOGGING == 1 + LOG(ERROR) << "Trying to modify the format of a read-only image"; +#endif + throw OrthancException(ErrorCode_ReadOnly); + } + + if (::Orthanc::GetBytesPerPixel(format) != ::Orthanc::GetBytesPerPixel(format_)) + { + throw OrthancException(ErrorCode_IncompatibleImageFormat); + } + + format_ = format; + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/ImageAccessor.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,152 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "../Enumerations.h" + +#include <string> +#include <stdint.h> + +namespace Orthanc +{ + class ImageAccessor + { + private: + template <Orthanc::PixelFormat Format> + friend struct ImageTraits; + + bool readOnly_; + PixelFormat format_; + unsigned int width_; + unsigned int height_; + unsigned int pitch_; + uint8_t *buffer_; + + template <typename T> + const T& GetPixelUnchecked(unsigned int x, + unsigned int y) const + { + const uint8_t* row = reinterpret_cast<const uint8_t*>(buffer_) + y * pitch_; + return reinterpret_cast<const T*>(row) [x]; + } + + + template <typename T> + T& GetPixelUnchecked(unsigned int x, + unsigned int y) + { + uint8_t* row = reinterpret_cast<uint8_t*>(buffer_) + y * pitch_; + return reinterpret_cast<T*>(row) [x]; + } + + public: + ImageAccessor() + { + AssignEmpty(PixelFormat_Grayscale8); + } + + virtual ~ImageAccessor() + { + } + + bool IsReadOnly() const + { + return readOnly_; + } + + PixelFormat GetFormat() const + { + return format_; + } + + unsigned int GetBytesPerPixel() const + { + return ::Orthanc::GetBytesPerPixel(format_); + } + + unsigned int GetWidth() const + { + return width_; + } + + unsigned int GetHeight() const + { + return height_; + } + + unsigned int GetPitch() const + { + return pitch_; + } + + unsigned int GetSize() const + { + return GetHeight() * GetPitch(); + } + + const void* GetConstBuffer() const + { + return buffer_; + } + + void* GetBuffer() const; + + const void* GetConstRow(unsigned int y) const; + + void* GetRow(unsigned int y) const; + + void AssignEmpty(PixelFormat format); + + void AssignReadOnly(PixelFormat format, + unsigned int width, + unsigned int height, + unsigned int pitch, + const void *buffer); + + void AssignWritable(PixelFormat format, + unsigned int width, + unsigned int height, + unsigned int pitch, + void *buffer); + + void ToMatlabString(std::string& target) const; + + ImageAccessor GetRegion(unsigned int x, + unsigned int y, + unsigned int width, + unsigned int height) const; + + void SetFormat(PixelFormat format); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/ImageBuffer.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,185 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "ImageBuffer.h" + +#include "../OrthancException.h" + +#include <stdio.h> +#include <stdlib.h> + +namespace Orthanc +{ + void ImageBuffer::Allocate() + { + if (changed_) + { + Deallocate(); + + /* + if (forceMinimalPitch_) + { + TODO: Align pitch and memory buffer to optimal size for SIMD. + } + */ + + pitch_ = GetBytesPerPixel() * width_; + size_t size = pitch_ * height_; + + if (size == 0) + { + buffer_ = NULL; + } + else + { + buffer_ = malloc(size); + if (buffer_ == NULL) + { + throw OrthancException(ErrorCode_NotEnoughMemory); + } + } + + changed_ = false; + } + } + + + void ImageBuffer::Deallocate() + { + if (buffer_ != NULL) + { + free(buffer_); + buffer_ = NULL; + changed_ = true; + } + } + + + ImageBuffer::ImageBuffer(PixelFormat format, + unsigned int width, + unsigned int height, + bool forceMinimalPitch) : + forceMinimalPitch_(forceMinimalPitch) + { + Initialize(); + SetWidth(width); + SetHeight(height); + SetFormat(format); + } + + + void ImageBuffer::Initialize() + { + changed_ = false; + forceMinimalPitch_ = true; + format_ = PixelFormat_Grayscale8; + width_ = 0; + height_ = 0; + pitch_ = 0; + buffer_ = NULL; + } + + + void ImageBuffer::SetFormat(PixelFormat format) + { + if (format != format_) + { + changed_ = true; + format_ = format; + } + } + + + void ImageBuffer::SetWidth(unsigned int width) + { + if (width != width_) + { + changed_ = true; + width_ = width; + } + } + + + void ImageBuffer::SetHeight(unsigned int height) + { + if (height != height_) + { + changed_ = true; + height_ = height; + } + } + + + ImageAccessor ImageBuffer::GetAccessor() + { + Allocate(); + + ImageAccessor accessor; + accessor.AssignWritable(format_, width_, height_, pitch_, buffer_); + return accessor; + } + + + ImageAccessor ImageBuffer::GetConstAccessor() + { + Allocate(); + + ImageAccessor accessor; + accessor.AssignReadOnly(format_, width_, height_, pitch_, buffer_); + return accessor; + } + + + void ImageBuffer::AcquireOwnership(ImageBuffer& other) + { + // Remove the content of the current image + Deallocate(); + + // Force the allocation of the other image (if not already + // allocated) + other.Allocate(); + + // Transfer the content of the other image + changed_ = false; + forceMinimalPitch_ = other.forceMinimalPitch_; + format_ = other.format_; + width_ = other.width_; + height_ = other.height_; + pitch_ = other.pitch_; + buffer_ = other.buffer_; + + // Force the reinitialization of the other image + other.Initialize(); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/ImageBuffer.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,115 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "ImageAccessor.h" + +#include <vector> +#include <stdint.h> +#include <boost/noncopyable.hpp> + +namespace Orthanc +{ + class ImageBuffer : public boost::noncopyable + { + private: + bool changed_; + + bool forceMinimalPitch_; // Currently unused + PixelFormat format_; + unsigned int width_; + unsigned int height_; + unsigned int pitch_; + void *buffer_; + + void Initialize(); + + void Allocate(); + + void Deallocate(); + + public: + ImageBuffer(PixelFormat format, + unsigned int width, + unsigned int height, + bool forceMinimalPitch); + + ImageBuffer() + { + Initialize(); + } + + ~ImageBuffer() + { + Deallocate(); + } + + PixelFormat GetFormat() const + { + return format_; + } + + void SetFormat(PixelFormat format); + + unsigned int GetWidth() const + { + return width_; + } + + void SetWidth(unsigned int width); + + unsigned int GetHeight() const + { + return height_; + } + + void SetHeight(unsigned int height); + + unsigned int GetBytesPerPixel() const + { + return ::Orthanc::GetBytesPerPixel(format_); + } + + ImageAccessor GetAccessor(); + + ImageAccessor GetConstAccessor(); + + bool IsMinimalPitchForced() const + { + return forceMinimalPitch_; + } + + void AcquireOwnership(ImageBuffer& other); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/ImageProcessing.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,1226 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "ImageProcessing.h" + +#include "PixelTraits.h" + +#include <boost/math/special_functions/round.hpp> + +#include <cassert> +#include <string.h> +#include <limits> +#include <stdint.h> + +namespace Orthanc +{ + template <typename TargetType, typename SourceType> + static void ConvertInternal(ImageAccessor& target, + const ImageAccessor& source) + { + const TargetType minValue = std::numeric_limits<TargetType>::min(); + const TargetType maxValue = std::numeric_limits<TargetType>::max(); + + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + TargetType* t = reinterpret_cast<TargetType*>(target.GetRow(y)); + const SourceType* s = reinterpret_cast<const SourceType*>(source.GetConstRow(y)); + + for (unsigned int x = 0; x < source.GetWidth(); x++, t++, s++) + { + if (static_cast<int32_t>(*s) < static_cast<int32_t>(minValue)) + { + *t = minValue; + } + else if (static_cast<int32_t>(*s) > static_cast<int32_t>(maxValue)) + { + *t = maxValue; + } + else + { + *t = static_cast<TargetType>(*s); + } + } + } + } + + + template <typename SourceType> + static void ConvertGrayscaleToFloat(ImageAccessor& target, + const ImageAccessor& source) + { + assert(sizeof(float) == 4); + + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + float* t = reinterpret_cast<float*>(target.GetRow(y)); + const SourceType* s = reinterpret_cast<const SourceType*>(source.GetConstRow(y)); + + for (unsigned int x = 0; x < source.GetWidth(); x++, t++, s++) + { + *t = static_cast<float>(*s); + } + } + } + + + template <typename TargetType> + static void ConvertColorToGrayscale(ImageAccessor& target, + const ImageAccessor& source) + { + assert(source.GetFormat() == PixelFormat_RGB24); + + const TargetType minValue = std::numeric_limits<TargetType>::min(); + const TargetType maxValue = std::numeric_limits<TargetType>::max(); + + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + TargetType* t = reinterpret_cast<TargetType*>(target.GetRow(y)); + const uint8_t* s = reinterpret_cast<const uint8_t*>(source.GetConstRow(y)); + + for (unsigned int x = 0; x < source.GetWidth(); x++, t++, s += 3) + { + // Y = 0.2126 R + 0.7152 G + 0.0722 B + int32_t v = (2126 * static_cast<int32_t>(s[0]) + + 7152 * static_cast<int32_t>(s[1]) + + 0722 * static_cast<int32_t>(s[2])) / 10000; + + if (static_cast<int32_t>(v) < static_cast<int32_t>(minValue)) + { + *t = minValue; + } + else if (static_cast<int32_t>(v) > static_cast<int32_t>(maxValue)) + { + *t = maxValue; + } + else + { + *t = static_cast<TargetType>(v); + } + } + } + } + + + template <typename PixelType> + static void SetInternal(ImageAccessor& image, + int64_t constant) + { + for (unsigned int y = 0; y < image.GetHeight(); y++) + { + PixelType* p = reinterpret_cast<PixelType*>(image.GetRow(y)); + + for (unsigned int x = 0; x < image.GetWidth(); x++, p++) + { + *p = static_cast<PixelType>(constant); + } + } + } + + + template <typename PixelType> + static void GetMinMaxValueInternal(PixelType& minValue, + PixelType& maxValue, + const ImageAccessor& source) + { + // Deal with the special case of empty image + if (source.GetWidth() == 0 || + source.GetHeight() == 0) + { + minValue = 0; + maxValue = 0; + return; + } + + minValue = std::numeric_limits<PixelType>::max(); + maxValue = std::numeric_limits<PixelType>::min(); + + const unsigned int width = source.GetWidth(); + + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const PixelType* p = reinterpret_cast<const PixelType*>(source.GetConstRow(y)); + + for (unsigned int x = 0; x < width; x++, p++) + { + if (*p < minValue) + { + minValue = *p; + } + + if (*p > maxValue) + { + maxValue = *p; + } + } + } + } + + + + template <typename PixelType> + static void AddConstantInternal(ImageAccessor& image, + int64_t constant) + { + if (constant == 0) + { + return; + } + + const int64_t minValue = std::numeric_limits<PixelType>::min(); + const int64_t maxValue = std::numeric_limits<PixelType>::max(); + + for (unsigned int y = 0; y < image.GetHeight(); y++) + { + PixelType* p = reinterpret_cast<PixelType*>(image.GetRow(y)); + + for (unsigned int x = 0; x < image.GetWidth(); x++, p++) + { + int64_t v = static_cast<int64_t>(*p) + constant; + + if (v > maxValue) + { + *p = std::numeric_limits<PixelType>::max(); + } + else if (v < minValue) + { + *p = std::numeric_limits<PixelType>::min(); + } + else + { + *p = static_cast<PixelType>(v); + } + } + } + } + + + + template <typename PixelType, + bool UseRound> + static void MultiplyConstantInternal(ImageAccessor& image, + float factor) + { + if (std::abs(factor - 1.0f) <= std::numeric_limits<float>::epsilon()) + { + return; + } + + const int64_t minValue = std::numeric_limits<PixelType>::min(); + const int64_t maxValue = std::numeric_limits<PixelType>::max(); + const unsigned int width = image.GetWidth(); + + for (unsigned int y = 0; y < image.GetHeight(); y++) + { + PixelType* p = reinterpret_cast<PixelType*>(image.GetRow(y)); + + for (unsigned int x = 0; x < width; x++, p++) + { + int64_t v; + if (UseRound) + { + // The "round" operation is very costly + v = boost::math::llround(static_cast<float>(*p) * factor); + } + else + { + v = static_cast<int64_t>(static_cast<float>(*p) * factor); + } + + if (v > maxValue) + { + *p = std::numeric_limits<PixelType>::max(); + } + else if (v < minValue) + { + *p = std::numeric_limits<PixelType>::min(); + } + else + { + *p = static_cast<PixelType>(v); + } + } + } + } + + + template <typename PixelType, + bool UseRound> + static void ShiftScaleInternal(ImageAccessor& image, + float offset, + float scaling) + { + const float minFloatValue = static_cast<float>(std::numeric_limits<PixelType>::min()); + const float maxFloatValue = static_cast<float>(std::numeric_limits<PixelType>::max()); + const PixelType minPixelValue = std::numeric_limits<PixelType>::min(); + const PixelType maxPixelValue = std::numeric_limits<PixelType>::max(); + + const unsigned int height = image.GetHeight(); + const unsigned int width = image.GetWidth(); + + for (unsigned int y = 0; y < height; y++) + { + PixelType* p = reinterpret_cast<PixelType*>(image.GetRow(y)); + + for (unsigned int x = 0; x < width; x++, p++) + { + float v = (static_cast<float>(*p) + offset) * scaling; + + if (v > maxFloatValue) + { + *p = maxPixelValue; + } + else if (v < minFloatValue) + { + *p = minPixelValue; + } + else if (UseRound) + { + // The "round" operation is very costly + *p = static_cast<PixelType>(boost::math::iround(v)); + } + else + { + *p = static_cast<PixelType>(v); + } + } + } + } + + + void ImageProcessing::Copy(ImageAccessor& target, + const ImageAccessor& source) + { + if (target.GetWidth() != source.GetWidth() || + target.GetHeight() != source.GetHeight()) + { + throw OrthancException(ErrorCode_IncompatibleImageSize); + } + + if (target.GetFormat() != source.GetFormat()) + { + throw OrthancException(ErrorCode_IncompatibleImageFormat); + } + + unsigned int lineSize = GetBytesPerPixel(source.GetFormat()) * source.GetWidth(); + + assert(source.GetPitch() >= lineSize && target.GetPitch() >= lineSize); + + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + memcpy(target.GetRow(y), source.GetConstRow(y), lineSize); + } + } + + + void ImageProcessing::Convert(ImageAccessor& target, + const ImageAccessor& source) + { + if (target.GetWidth() != source.GetWidth() || + target.GetHeight() != source.GetHeight()) + { + throw OrthancException(ErrorCode_IncompatibleImageSize); + } + + if (source.GetFormat() == target.GetFormat()) + { + Copy(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_Grayscale16 && + source.GetFormat() == PixelFormat_Grayscale8) + { + ConvertInternal<uint16_t, uint8_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_SignedGrayscale16 && + source.GetFormat() == PixelFormat_Grayscale8) + { + ConvertInternal<int16_t, uint8_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_Grayscale8 && + source.GetFormat() == PixelFormat_Grayscale16) + { + ConvertInternal<uint8_t, uint16_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_SignedGrayscale16 && + source.GetFormat() == PixelFormat_Grayscale16) + { + ConvertInternal<int16_t, uint16_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_Grayscale8 && + source.GetFormat() == PixelFormat_SignedGrayscale16) + { + ConvertInternal<uint8_t, int16_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_Grayscale16 && + source.GetFormat() == PixelFormat_SignedGrayscale16) + { + ConvertInternal<uint16_t, int16_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_Grayscale8 && + source.GetFormat() == PixelFormat_RGB24) + { + ConvertColorToGrayscale<uint8_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_Grayscale16 && + source.GetFormat() == PixelFormat_RGB24) + { + ConvertColorToGrayscale<uint16_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_SignedGrayscale16 && + source.GetFormat() == PixelFormat_RGB24) + { + ConvertColorToGrayscale<int16_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_Float32 && + source.GetFormat() == PixelFormat_Grayscale8) + { + ConvertGrayscaleToFloat<uint8_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_Float32 && + source.GetFormat() == PixelFormat_Grayscale16) + { + ConvertGrayscaleToFloat<uint16_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_Float32 && + source.GetFormat() == PixelFormat_Grayscale32) + { + ConvertGrayscaleToFloat<uint32_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_Float32 && + source.GetFormat() == PixelFormat_SignedGrayscale16) + { + ConvertGrayscaleToFloat<int16_t>(target, source); + return; + } + + if (target.GetFormat() == PixelFormat_Grayscale8 && + source.GetFormat() == PixelFormat_RGBA32) + { + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const uint8_t* p = reinterpret_cast<const uint8_t*>(source.GetConstRow(y)); + uint8_t* q = reinterpret_cast<uint8_t*>(target.GetRow(y)); + for (unsigned int x = 0; x < source.GetWidth(); x++, q++) + { + *q = static_cast<uint8_t>((2126 * static_cast<uint32_t>(p[0]) + + 7152 * static_cast<uint32_t>(p[1]) + + 0722 * static_cast<uint32_t>(p[2])) / 10000); + p += 4; + } + } + + return; + } + + if (target.GetFormat() == PixelFormat_RGB24 && + source.GetFormat() == PixelFormat_RGBA32) + { + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const uint8_t* p = reinterpret_cast<const uint8_t*>(source.GetConstRow(y)); + uint8_t* q = reinterpret_cast<uint8_t*>(target.GetRow(y)); + for (unsigned int x = 0; x < source.GetWidth(); x++) + { + q[0] = p[0]; + q[1] = p[1]; + q[2] = p[2]; + p += 4; + q += 3; + } + } + + return; + } + + if (target.GetFormat() == PixelFormat_RGB24 && + source.GetFormat() == PixelFormat_BGRA32) + { + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const uint8_t* p = reinterpret_cast<const uint8_t*>(source.GetConstRow(y)); + uint8_t* q = reinterpret_cast<uint8_t*>(target.GetRow(y)); + for (unsigned int x = 0; x < source.GetWidth(); x++) + { + q[0] = p[2]; + q[1] = p[1]; + q[2] = p[0]; + p += 4; + q += 3; + } + } + + return; + } + + if (target.GetFormat() == PixelFormat_RGBA32 && + source.GetFormat() == PixelFormat_RGB24) + { + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const uint8_t* p = reinterpret_cast<const uint8_t*>(source.GetConstRow(y)); + uint8_t* q = reinterpret_cast<uint8_t*>(target.GetRow(y)); + for (unsigned int x = 0; x < source.GetWidth(); x++) + { + q[0] = p[0]; + q[1] = p[1]; + q[2] = p[2]; + q[3] = 255; // Set the alpha channel to full opacity + p += 3; + q += 4; + } + } + + return; + } + + if (target.GetFormat() == PixelFormat_RGB24 && + source.GetFormat() == PixelFormat_Grayscale8) + { + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const uint8_t* p = reinterpret_cast<const uint8_t*>(source.GetConstRow(y)); + uint8_t* q = reinterpret_cast<uint8_t*>(target.GetRow(y)); + for (unsigned int x = 0; x < source.GetWidth(); x++) + { + q[0] = *p; + q[1] = *p; + q[2] = *p; + p += 1; + q += 3; + } + } + + return; + } + + if (target.GetFormat() == PixelFormat_RGBA32 && + source.GetFormat() == PixelFormat_Grayscale8) + { + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const uint8_t* p = reinterpret_cast<const uint8_t*>(source.GetConstRow(y)); + uint8_t* q = reinterpret_cast<uint8_t*>(target.GetRow(y)); + for (unsigned int x = 0; x < source.GetWidth(); x++) + { + q[0] = *p; + q[1] = *p; + q[2] = *p; + q[3] = 255; + p += 1; + q += 4; + } + } + + return; + } + + if (target.GetFormat() == PixelFormat_BGRA32 && + source.GetFormat() == PixelFormat_Grayscale16) + { + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const uint16_t* p = reinterpret_cast<const uint16_t*>(source.GetConstRow(y)); + uint8_t* q = reinterpret_cast<uint8_t*>(target.GetRow(y)); + for (unsigned int x = 0; x < source.GetWidth(); x++) + { + uint8_t value = (*p < 256 ? *p : 255); + q[0] = value; + q[1] = value; + q[2] = value; + q[3] = 255; + p += 1; + q += 4; + } + } + + return; + } + + if (target.GetFormat() == PixelFormat_BGRA32 && + source.GetFormat() == PixelFormat_SignedGrayscale16) + { + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const int16_t* p = reinterpret_cast<const int16_t*>(source.GetConstRow(y)); + uint8_t* q = reinterpret_cast<uint8_t*>(target.GetRow(y)); + for (unsigned int x = 0; x < source.GetWidth(); x++) + { + uint8_t value; + if (*p < 0) + { + value = 0; + } + else if (*p > 255) + { + value = 255; + } + else + { + value = static_cast<uint8_t>(*p); + } + + q[0] = value; + q[1] = value; + q[2] = value; + q[3] = 255; + p += 1; + q += 4; + } + } + + return; + } + + if (target.GetFormat() == PixelFormat_BGRA32 && + source.GetFormat() == PixelFormat_RGB24) + { + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const uint8_t* p = reinterpret_cast<const uint8_t*>(source.GetConstRow(y)); + uint8_t* q = reinterpret_cast<uint8_t*>(target.GetRow(y)); + for (unsigned int x = 0; x < source.GetWidth(); x++) + { + q[0] = p[2]; + q[1] = p[1]; + q[2] = p[0]; + q[3] = 255; + p += 3; + q += 4; + } + } + + return; + } + + if (target.GetFormat() == PixelFormat_RGB24 && + source.GetFormat() == PixelFormat_RGB48) + { + for (unsigned int y = 0; y < source.GetHeight(); y++) + { + const uint16_t* p = reinterpret_cast<const uint16_t*>(source.GetConstRow(y)); + uint8_t* q = reinterpret_cast<uint8_t*>(target.GetRow(y)); + for (unsigned int x = 0; x < source.GetWidth(); x++) + { + q[0] = p[0] >> 8; + q[1] = p[1] >> 8; + q[2] = p[2] >> 8; + p += 3; + q += 3; + } + } + + return; + } + + throw OrthancException(ErrorCode_NotImplemented); + } + + + + void ImageProcessing::Set(ImageAccessor& image, + int64_t value) + { + switch (image.GetFormat()) + { + case PixelFormat_Grayscale8: + memset(image.GetBuffer(), static_cast<uint8_t>(value), image.GetPitch() * image.GetHeight()); + return; + + case PixelFormat_Grayscale16: + if (value == 0) + { + memset(image.GetBuffer(), 0, image.GetPitch() * image.GetHeight()); + } + else + { + SetInternal<uint16_t>(image, value); + } + return; + + case PixelFormat_Grayscale32: + if (value == 0) + { + memset(image.GetBuffer(), 0, image.GetPitch() * image.GetHeight()); + } + else + { + SetInternal<uint32_t>(image, value); + } + return; + + case PixelFormat_SignedGrayscale16: + if (value == 0) + { + memset(image.GetBuffer(), 0, image.GetPitch() * image.GetHeight()); + } + else + { + SetInternal<int16_t>(image, value); + } + return; + + case PixelFormat_Float32: + assert(sizeof(float) == 4); + SetInternal<float>(image, value); + return; + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + + void ImageProcessing::Set(ImageAccessor& image, + uint8_t red, + uint8_t green, + uint8_t blue, + uint8_t alpha) + { + uint8_t p[4]; + unsigned int size; + + switch (image.GetFormat()) + { + case PixelFormat_RGBA32: + p[0] = red; + p[1] = green; + p[2] = blue; + p[3] = alpha; + size = 4; + break; + + case PixelFormat_BGRA32: + p[0] = blue; + p[1] = green; + p[2] = red; + p[3] = alpha; + size = 4; + break; + + case PixelFormat_RGB24: + p[0] = red; + p[1] = green; + p[2] = blue; + size = 3; + break; + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + + for (unsigned int y = 0; y < image.GetHeight(); y++) + { + uint8_t* q = reinterpret_cast<uint8_t*>(image.GetRow(y)); + + for (unsigned int x = 0; x < image.GetWidth(); x++) + { + for (unsigned int i = 0; i < size; i++) + { + q[i] = p[i]; + } + + q += size; + } + } + } + + + void ImageProcessing::ShiftRight(ImageAccessor& image, + unsigned int shift) + { + if (image.GetWidth() == 0 || + image.GetHeight() == 0 || + shift == 0) + { + // Nothing to do + return; + } + + throw OrthancException(ErrorCode_NotImplemented); + } + + + void ImageProcessing::GetMinMaxIntegerValue(int64_t& minValue, + int64_t& maxValue, + const ImageAccessor& image) + { + switch (image.GetFormat()) + { + case PixelFormat_Grayscale8: + { + uint8_t a, b; + GetMinMaxValueInternal<uint8_t>(a, b, image); + minValue = a; + maxValue = b; + break; + } + + case PixelFormat_Grayscale16: + { + uint16_t a, b; + GetMinMaxValueInternal<uint16_t>(a, b, image); + minValue = a; + maxValue = b; + break; + } + + case PixelFormat_Grayscale32: + { + uint32_t a, b; + GetMinMaxValueInternal<uint32_t>(a, b, image); + minValue = a; + maxValue = b; + break; + } + + case PixelFormat_SignedGrayscale16: + { + int16_t a, b; + GetMinMaxValueInternal<int16_t>(a, b, image); + minValue = a; + maxValue = b; + break; + } + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + + void ImageProcessing::GetMinMaxFloatValue(float& minValue, + float& maxValue, + const ImageAccessor& image) + { + switch (image.GetFormat()) + { + case PixelFormat_Float32: + { + assert(sizeof(float) == 32); + float a, b; + GetMinMaxValueInternal<float>(a, b, image); + minValue = a; + maxValue = b; + break; + } + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + + + void ImageProcessing::AddConstant(ImageAccessor& image, + int64_t value) + { + switch (image.GetFormat()) + { + case PixelFormat_Grayscale8: + AddConstantInternal<uint8_t>(image, value); + return; + + case PixelFormat_Grayscale16: + AddConstantInternal<uint16_t>(image, value); + return; + + case PixelFormat_SignedGrayscale16: + AddConstantInternal<int16_t>(image, value); + return; + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + + void ImageProcessing::MultiplyConstant(ImageAccessor& image, + float factor, + bool useRound) + { + switch (image.GetFormat()) + { + case PixelFormat_Grayscale8: + if (useRound) + { + MultiplyConstantInternal<uint8_t, true>(image, factor); + } + else + { + MultiplyConstantInternal<uint8_t, false>(image, factor); + } + return; + + case PixelFormat_Grayscale16: + if (useRound) + { + MultiplyConstantInternal<uint16_t, true>(image, factor); + } + else + { + MultiplyConstantInternal<uint16_t, false>(image, factor); + } + return; + + case PixelFormat_SignedGrayscale16: + if (useRound) + { + MultiplyConstantInternal<int16_t, true>(image, factor); + } + else + { + MultiplyConstantInternal<int16_t, false>(image, factor); + } + return; + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + + void ImageProcessing::ShiftScale(ImageAccessor& image, + float offset, + float scaling, + bool useRound) + { + switch (image.GetFormat()) + { + case PixelFormat_Grayscale8: + if (useRound) + { + ShiftScaleInternal<uint8_t, true>(image, offset, scaling); + } + else + { + ShiftScaleInternal<uint8_t, false>(image, offset, scaling); + } + return; + + case PixelFormat_Grayscale16: + if (useRound) + { + ShiftScaleInternal<uint16_t, true>(image, offset, scaling); + } + else + { + ShiftScaleInternal<uint16_t, false>(image, offset, scaling); + } + return; + + case PixelFormat_SignedGrayscale16: + if (useRound) + { + ShiftScaleInternal<int16_t, true>(image, offset, scaling); + } + else + { + ShiftScaleInternal<int16_t, false>(image, offset, scaling); + } + return; + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + + void ImageProcessing::Invert(ImageAccessor& image) + { + switch (image.GetFormat()) + { + case PixelFormat_Grayscale8: + { + for (unsigned int y = 0; y < image.GetHeight(); y++) + { + uint8_t* p = reinterpret_cast<uint8_t*>(image.GetRow(y)); + + for (unsigned int x = 0; x < image.GetWidth(); x++, p++) + { + *p = 255 - (*p); + } + } + + return; + } + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + + + namespace + { + template <Orthanc::PixelFormat Format> + class BresenhamPixelWriter + { + private: + typedef typename PixelTraits<Format>::PixelType PixelType; + + Orthanc::ImageAccessor& image_; + PixelType value_; + + void PlotLineLow(int x0, + int y0, + int x1, + int y1) + { + int dx = x1 - x0; + int dy = y1 - y0; + int yi = 1; + + if (dy < 0) + { + yi = -1; + dy = -dy; + } + + int d = 2 * dy - dx; + int y = y0; + + for (int x = x0; x <= x1; x++) + { + Write(x, y); + + if (d > 0) + { + y = y + yi; + d = d - 2 * dx; + } + + d = d + 2*dy; + } + } + + void PlotLineHigh(int x0, + int y0, + int x1, + int y1) + { + int dx = x1 - x0; + int dy = y1 - y0; + int xi = 1; + + if (dx < 0) + { + xi = -1; + dx = -dx; + } + + int d = 2 * dx - dy; + int x = x0; + + for (int y = y0; y <= y1; y++) + { + Write(x, y); + + if (d > 0) + { + x = x + xi; + d = d - 2 * dy; + } + + d = d + 2 * dx; + } + } + + public: + BresenhamPixelWriter(Orthanc::ImageAccessor& image, + int64_t value) : + image_(image), + value_(PixelTraits<Format>::IntegerToPixel(value)) + { + } + + BresenhamPixelWriter(Orthanc::ImageAccessor& image, + const PixelType& value) : + image_(image), + value_(value) + { + } + + void Write(int x, + int y) + { + if (x >= 0 && + y >= 0 && + static_cast<unsigned int>(x) < image_.GetWidth() && + static_cast<unsigned int>(y) < image_.GetHeight()) + { + PixelType* p = reinterpret_cast<PixelType*>(image_.GetRow(y)); + p[x] = value_; + } + } + + void DrawSegment(int x0, + int y0, + int x1, + int y1) + { + // This is an implementation of Bresenham's line algorithm + // https://en.wikipedia.org/wiki/Bresenham%27s_line_algorithm#All_cases + + if (abs(y1 - y0) < abs(x1 - x0)) + { + if (x0 > x1) + { + PlotLineLow(x1, y1, x0, y0); + } + else + { + PlotLineLow(x0, y0, x1, y1); + } + } + else + { + if (y0 > y1) + { + PlotLineHigh(x1, y1, x0, y0); + } + else + { + PlotLineHigh(x0, y0, x1, y1); + } + } + } + }; + } + + + void ImageProcessing::DrawLineSegment(ImageAccessor& image, + int x0, + int y0, + int x1, + int y1, + int64_t value) + { + switch (image.GetFormat()) + { + case Orthanc::PixelFormat_Grayscale8: + { + BresenhamPixelWriter<Orthanc::PixelFormat_Grayscale8> writer(image, value); + writer.DrawSegment(x0, y0, x1, y1); + break; + } + + case Orthanc::PixelFormat_Grayscale16: + { + BresenhamPixelWriter<Orthanc::PixelFormat_Grayscale16> writer(image, value); + writer.DrawSegment(x0, y0, x1, y1); + break; + } + + case Orthanc::PixelFormat_SignedGrayscale16: + { + BresenhamPixelWriter<Orthanc::PixelFormat_SignedGrayscale16> writer(image, value); + writer.DrawSegment(x0, y0, x1, y1); + break; + } + + default: + throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); + } + } + + + void ImageProcessing::DrawLineSegment(ImageAccessor& image, + int x0, + int y0, + int x1, + int y1, + uint8_t red, + uint8_t green, + uint8_t blue, + uint8_t alpha) + { + switch (image.GetFormat()) + { + case Orthanc::PixelFormat_BGRA32: + { + PixelTraits<Orthanc::PixelFormat_BGRA32>::PixelType pixel; + pixel.red_ = red; + pixel.green_ = green; + pixel.blue_ = blue; + pixel.alpha_ = alpha; + + BresenhamPixelWriter<Orthanc::PixelFormat_BGRA32> writer(image, pixel); + writer.DrawSegment(x0, y0, x1, y1); + break; + } + + case Orthanc::PixelFormat_RGB24: + { + PixelTraits<Orthanc::PixelFormat_RGB24>::PixelType pixel; + pixel.red_ = red; + pixel.green_ = green; + pixel.blue_ = blue; + + BresenhamPixelWriter<Orthanc::PixelFormat_RGB24> writer(image, pixel); + writer.DrawSegment(x0, y0, x1, y1); + break; + } + + default: + throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented); + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/ImageProcessing.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,103 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "ImageAccessor.h" + +#include <stdint.h> + +namespace Orthanc +{ + namespace ImageProcessing + { + void Copy(ImageAccessor& target, + const ImageAccessor& source); + + void Convert(ImageAccessor& target, + const ImageAccessor& source); + + void Set(ImageAccessor& image, + int64_t value); + + void Set(ImageAccessor& image, + uint8_t red, + uint8_t green, + uint8_t blue, + uint8_t alpha); + + void ShiftRight(ImageAccessor& target, + unsigned int shift); + + void GetMinMaxIntegerValue(int64_t& minValue, + int64_t& maxValue, + const ImageAccessor& image); + + void GetMinMaxFloatValue(float& minValue, + float& maxValue, + const ImageAccessor& image); + + void AddConstant(ImageAccessor& image, + int64_t value); + + // "useRound" is expensive + void MultiplyConstant(ImageAccessor& image, + float factor, + bool useRound); + + // "useRound" is expensive + void ShiftScale(ImageAccessor& image, + float offset, + float scaling, + bool useRound); + + void Invert(ImageAccessor& image); + + void DrawLineSegment(ImageAccessor& image, + int x0, + int y0, + int x1, + int y1, + int64_t value); + + void DrawLineSegment(ImageAccessor& image, + int x0, + int y0, + int x1, + int y1, + uint8_t red, + uint8_t green, + uint8_t blue, + uint8_t alpha); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/ImageTraits.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,89 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "ImageAccessor.h" +#include "PixelTraits.h" + +#include <cassert> + +namespace Orthanc +{ + template <PixelFormat Format> + struct ImageTraits + { + typedef ::Orthanc::PixelTraits<Format> PixelTraits; + typedef typename PixelTraits::PixelType PixelType; + + static PixelFormat GetPixelFormat() + { + return Format; + } + + static void GetPixel(PixelType& target, + const ImageAccessor& image, + unsigned int x, + unsigned int y) + { + assert(x < image.GetWidth() && y < image.GetHeight()); + PixelTraits::Copy(target, image.GetPixelUnchecked<PixelType>(x, y)); + } + + static void SetPixel(ImageAccessor& image, + const PixelType& value, + unsigned int x, + unsigned int y) + { + assert(x < image.GetWidth() && y < image.GetHeight()); + PixelTraits::Copy(image.GetPixelUnchecked<PixelType>(x, y), value); + } + + static float GetFloatPixel(const ImageAccessor& image, + unsigned int x, + unsigned int y) + { + assert(x < image.GetWidth() && y < image.GetHeight()); + return PixelTraits::PixelToFloat(image.GetPixelUnchecked<PixelType>(x, y)); + } + + static void SetFloatPixel(ImageAccessor& image, + float value, + unsigned int x, + unsigned int y) + { + assert(x < image.GetWidth() && y < image.GetHeight()); + PixelTraits::FloatToPixel(image.GetPixelUnchecked<PixelType>(x, y), value); + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/JpegErrorManager.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,70 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "JpegErrorManager.h" + +namespace Orthanc +{ + namespace Internals + { + void JpegErrorManager::OutputMessage(j_common_ptr cinfo) + { + char message[JMSG_LENGTH_MAX]; + (*cinfo->err->format_message) (cinfo, message); + + JpegErrorManager* that = reinterpret_cast<JpegErrorManager*>(cinfo->err); + that->message = std::string(message); + } + + + void JpegErrorManager::ErrorExit(j_common_ptr cinfo) + { + (*cinfo->err->output_message) (cinfo); + + JpegErrorManager* that = reinterpret_cast<JpegErrorManager*>(cinfo->err); + longjmp(that->setjmp_buffer, 1); + } + + + JpegErrorManager::JpegErrorManager() + { + memset(&pub, 0, sizeof(struct jpeg_error_mgr)); + memset(&setjmp_buffer, 0, sizeof(jmp_buf)); + + jpeg_std_error(&pub); + pub.error_exit = ErrorExit; + pub.output_message = OutputMessage; + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/JpegErrorManager.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,83 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + +#pragma once + +#if !defined(ORTHANC_ENABLE_JPEG) +# error The macro ORTHANC_ENABLE_JPEG must be defined +#endif + +#if ORTHANC_ENABLE_JPEG != 1 +# error JPEG support must be enabled to include this file +#endif + +#include <string.h> +#include <stdio.h> +#include <jpeglib.h> +#include <setjmp.h> +#include <string> + +namespace Orthanc +{ + namespace Internals + { + class JpegErrorManager + { + private: + struct jpeg_error_mgr pub; /* "public" fields */ + jmp_buf setjmp_buffer; /* for return to caller */ + std::string message; + + static void OutputMessage(j_common_ptr cinfo); + + static void ErrorExit(j_common_ptr cinfo); + + public: + JpegErrorManager(); + + struct jpeg_error_mgr* GetPublic() + { + return &pub; + } + + jmp_buf& GetJumpBuffer() + { + return setjmp_buffer; + } + + const std::string& GetMessage() const + { + return message; + } + }; + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/JpegReader.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,192 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "JpegReader.h" + +#include "JpegErrorManager.h" +#include "../OrthancException.h" +#include "../Logging.h" + +#if ORTHANC_SANDBOXED == 0 +# include "../SystemToolbox.h" +#endif + + +namespace Orthanc +{ + static void Uncompress(struct jpeg_decompress_struct& cinfo, + std::string& content, + ImageAccessor& accessor) + { + jpeg_read_header(&cinfo, TRUE); + jpeg_start_decompress(&cinfo); + + PixelFormat format; + if (cinfo.output_components == 1 && + cinfo.out_color_space == JCS_GRAYSCALE) + { + format = PixelFormat_Grayscale8; + } + else if (cinfo.output_components == 3 && + cinfo.out_color_space == JCS_RGB) + { + format = PixelFormat_RGB24; + } + else + { + throw OrthancException(ErrorCode_NotImplemented); + } + + unsigned int pitch = cinfo.output_width * cinfo.output_components; + + /* Make a one-row-high sample array that will go away when done with image */ + JSAMPARRAY buffer = (*cinfo.mem->alloc_sarray) ((j_common_ptr) &cinfo, JPOOL_IMAGE, pitch, 1); + + try + { + content.resize(pitch * cinfo.output_height); + } + catch (...) + { + throw OrthancException(ErrorCode_NotEnoughMemory); + } + + accessor.AssignWritable(format, cinfo.output_width, cinfo.output_height, pitch, + content.empty() ? NULL : &content[0]); + + uint8_t* target = reinterpret_cast<uint8_t*>(&content[0]); + while (cinfo.output_scanline < cinfo.output_height) + { + jpeg_read_scanlines(&cinfo, buffer, 1); + memcpy(target, buffer[0], pitch); + target += pitch; + } + + // Everything went fine, "setjmp()" didn't get called + + jpeg_finish_decompress(&cinfo); + } + + +#if ORTHANC_SANDBOXED == 0 + void JpegReader::ReadFromFile(const std::string& filename) + { + FILE* fp = SystemToolbox::OpenFile(filename, FileMode_ReadBinary); + if (!fp) + { + throw OrthancException(ErrorCode_InexistentFile); + } + + struct jpeg_decompress_struct cinfo; + memset(&cinfo, 0, sizeof(struct jpeg_decompress_struct)); + + Internals::JpegErrorManager jerr; + cinfo.err = jerr.GetPublic(); + + if (setjmp(jerr.GetJumpBuffer())) + { + jpeg_destroy_decompress(&cinfo); + fclose(fp); + LOG(ERROR) << "Error during JPEG decoding: " << jerr.GetMessage(); + throw OrthancException(ErrorCode_InternalError); + } + + // Below this line, we are under the scope of a "setjmp" + + jpeg_create_decompress(&cinfo); + jpeg_stdio_src(&cinfo, fp); + + try + { + Uncompress(cinfo, content_, *this); + } + catch (OrthancException&) + { + jpeg_destroy_decompress(&cinfo); + fclose(fp); + throw; + } + + jpeg_destroy_decompress(&cinfo); + fclose(fp); + } +#endif + + + void JpegReader::ReadFromMemory(const void* buffer, + size_t size) + { + struct jpeg_decompress_struct cinfo; + memset(&cinfo, 0, sizeof(struct jpeg_decompress_struct)); + + Internals::JpegErrorManager jerr; + cinfo.err = jerr.GetPublic(); + + if (setjmp(jerr.GetJumpBuffer())) + { + jpeg_destroy_decompress(&cinfo); + LOG(ERROR) << "Error during JPEG decoding: " << jerr.GetMessage(); + throw OrthancException(ErrorCode_InternalError); + } + + // Below this line, we are under the scope of a "setjmp" + jpeg_create_decompress(&cinfo); + jpeg_mem_src(&cinfo, const_cast<unsigned char*>(reinterpret_cast<const unsigned char*>(buffer)), size); + + try + { + Uncompress(cinfo, content_, *this); + } + catch (OrthancException&) + { + jpeg_destroy_decompress(&cinfo); + throw; + } + + jpeg_destroy_decompress(&cinfo); + } + + + void JpegReader::ReadFromMemory(const std::string& buffer) + { + if (buffer.empty()) + { + ReadFromMemory(NULL, 0); + } + else + { + ReadFromMemory(buffer.c_str(), buffer.size()); + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/JpegReader.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,72 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(ORTHANC_SANDBOXED) +# error The macro ORTHANC_SANDBOXED must be defined +#endif + +#if !defined(ORTHANC_ENABLE_JPEG) +# error The macro ORTHANC_ENABLE_JPEG must be defined +#endif + +#if ORTHANC_ENABLE_JPEG != 1 +# error JPEG support must be enabled to include this file +#endif + +#include "ImageAccessor.h" + +#include <string> +#include <boost/noncopyable.hpp> + +namespace Orthanc +{ + class JpegReader : + public ImageAccessor, + public boost::noncopyable + { + private: + std::string content_; + + public: +#if ORTHANC_SANDBOXED == 0 + void ReadFromFile(const std::string& filename); +#endif + + void ReadFromMemory(const void* buffer, + size_t size); + + void ReadFromMemory(const std::string& buffer); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/JpegWriter.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,211 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "JpegWriter.h" + +#include "../OrthancException.h" +#include "../Logging.h" +#include "JpegErrorManager.h" + +#if ORTHANC_SANDBOXED == 0 +# include "../SystemToolbox.h" +#endif + +#include <stdlib.h> +#include <vector> + +namespace Orthanc +{ + static void GetLines(std::vector<uint8_t*>& lines, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer) + { + if (format != PixelFormat_Grayscale8 && + format != PixelFormat_RGB24) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + lines.resize(height); + + uint8_t* base = const_cast<uint8_t*>(reinterpret_cast<const uint8_t*>(buffer)); + for (unsigned int y = 0; y < height; y++) + { + lines[y] = base + static_cast<intptr_t>(y) * static_cast<intptr_t>(pitch); + } + } + + + static void Compress(struct jpeg_compress_struct& cinfo, + std::vector<uint8_t*>& lines, + unsigned int width, + unsigned int height, + PixelFormat format, + uint8_t quality) + { + cinfo.image_width = width; + cinfo.image_height = height; + + switch (format) + { + case PixelFormat_Grayscale8: + cinfo.input_components = 1; + cinfo.in_color_space = JCS_GRAYSCALE; + break; + + case PixelFormat_RGB24: + cinfo.input_components = 3; + cinfo.in_color_space = JCS_RGB; + break; + + default: + throw OrthancException(ErrorCode_InternalError); + } + + jpeg_set_defaults(&cinfo); + jpeg_set_quality(&cinfo, quality, TRUE); + jpeg_start_compress(&cinfo, TRUE); + jpeg_write_scanlines(&cinfo, &lines[0], height); + jpeg_finish_compress(&cinfo); + jpeg_destroy_compress(&cinfo); + } + + + void JpegWriter::SetQuality(uint8_t quality) + { + if (quality == 0 || quality > 100) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + quality_ = quality; + } + + +#if ORTHANC_SANDBOXED == 0 + void JpegWriter::WriteToFileInternal(const std::string& filename, + unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer) + { + FILE* fp = SystemToolbox::OpenFile(filename, FileMode_WriteBinary); + if (fp == NULL) + { + throw OrthancException(ErrorCode_CannotWriteFile); + } + + std::vector<uint8_t*> lines; + GetLines(lines, height, pitch, format, buffer); + + struct jpeg_compress_struct cinfo; + memset(&cinfo, 0, sizeof(struct jpeg_compress_struct)); + + Internals::JpegErrorManager jerr; + cinfo.err = jerr.GetPublic(); + + if (setjmp(jerr.GetJumpBuffer())) + { + /* If we get here, the JPEG code has signaled an error. + * We need to clean up the JPEG object, close the input file, and return. + */ + jpeg_destroy_compress(&cinfo); + fclose(fp); + LOG(ERROR) << "Error during JPEG encoding: " << jerr.GetMessage(); + throw OrthancException(ErrorCode_InternalError); + } + + // Do not allocate data on the stack below this line! + + jpeg_create_compress(&cinfo); + jpeg_stdio_dest(&cinfo, fp); + Compress(cinfo, lines, width, height, format, quality_); + + // Everything went fine, "setjmp()" didn't get called + + fclose(fp); + } +#endif + + +#if ORTHANC_SANDBOXED == 0 + void JpegWriter::WriteToMemoryInternal(std::string& jpeg, + unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer) + { + std::vector<uint8_t*> lines; + GetLines(lines, height, pitch, format, buffer); + + struct jpeg_compress_struct cinfo; + memset(&cinfo, 0, sizeof(struct jpeg_compress_struct)); + + Internals::JpegErrorManager jerr; + + unsigned char* data = NULL; + unsigned long size; + + if (setjmp(jerr.GetJumpBuffer())) + { + jpeg_destroy_compress(&cinfo); + + if (data != NULL) + { + free(data); + } + + LOG(ERROR) << "Error during JPEG encoding: " << jerr.GetMessage(); + throw OrthancException(ErrorCode_InternalError); + } + + // Do not allocate data on the stack below this line! + + jpeg_create_compress(&cinfo); + cinfo.err = jerr.GetPublic(); + jpeg_mem_dest(&cinfo, &data, &size); + + Compress(cinfo, lines, width, height, format, quality_); + + // Everything went fine, "setjmp()" didn't get called + + jpeg.assign(reinterpret_cast<const char*>(data), size); + free(data); + } +#endif +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/JpegWriter.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,82 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(ORTHANC_ENABLE_JPEG) +# error The macro ORTHANC_ENABLE_JPEG must be defined +#endif + +#if ORTHANC_ENABLE_JPEG != 1 +# error JPEG support must be enabled to include this file +#endif + +#include "IImageWriter.h" + +namespace Orthanc +{ + class JpegWriter : public IImageWriter + { + protected: + virtual void WriteToFileInternal(const std::string& filename, + unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer); + +#if ORTHANC_SANDBOXED == 0 + virtual void WriteToMemoryInternal(std::string& jpeg, + unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer); +#endif + + private: + uint8_t quality_; + + public: + JpegWriter() : quality_(90) + { + } + + void SetQuality(uint8_t quality); + + uint8_t GetQuality() const + { + return quality_; + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/PixelTraits.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,267 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "../Enumerations.h" +#include "../OrthancException.h" + +#include <limits> + +namespace Orthanc +{ + template <PixelFormat format, + typename _PixelType> + struct IntegerPixelTraits + { + typedef _PixelType PixelType; + + ORTHANC_FORCE_INLINE + static PixelFormat GetPixelFormat() + { + return format; + } + + ORTHANC_FORCE_INLINE + static PixelType IntegerToPixel(int64_t value) + { + if (value < static_cast<int64_t>(std::numeric_limits<PixelType>::min()) || + value > static_cast<int64_t>(std::numeric_limits<PixelType>::max())) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + else + { + return static_cast<PixelType>(value); + } + } + + ORTHANC_FORCE_INLINE + static void SetZero(PixelType& target) + { + target = 0; + } + + ORTHANC_FORCE_INLINE + static void SetMinValue(PixelType& target) + { + target = std::numeric_limits<PixelType>::min(); + } + + ORTHANC_FORCE_INLINE + static void SetMaxValue(PixelType& target) + { + target = std::numeric_limits<PixelType>::max(); + } + + ORTHANC_FORCE_INLINE + static void Copy(PixelType& target, + const PixelType& source) + { + target = source; + } + + ORTHANC_FORCE_INLINE + static float PixelToFloat(const PixelType& source) + { + return static_cast<float>(source); + } + + ORTHANC_FORCE_INLINE + static void FloatToPixel(PixelType& target, + float value) + { + if (value < static_cast<float>(std::numeric_limits<PixelType>::min())) + { + target = std::numeric_limits<PixelType>::min(); + } + else if (value > static_cast<float>(std::numeric_limits<PixelType>::max())) + { + target = std::numeric_limits<PixelType>::max(); + } + else + { + target = static_cast<PixelType>(value); + } + } + + ORTHANC_FORCE_INLINE + static bool IsEqual(const PixelType& a, + const PixelType& b) + { + return a == b; + } + }; + + + template <PixelFormat Format> + struct PixelTraits; + + + template <> + struct PixelTraits<PixelFormat_Grayscale8> : + public IntegerPixelTraits<PixelFormat_Grayscale8, uint8_t> + { + }; + + + template <> + struct PixelTraits<PixelFormat_Grayscale16> : + public IntegerPixelTraits<PixelFormat_Grayscale16, uint16_t> + { + }; + + + template <> + struct PixelTraits<PixelFormat_SignedGrayscale16> : + public IntegerPixelTraits<PixelFormat_SignedGrayscale16, int16_t> + { + }; + + + template <> + struct PixelTraits<PixelFormat_RGB24> + { + struct PixelType + { + uint8_t red_; + uint8_t green_; + uint8_t blue_; + }; + + ORTHANC_FORCE_INLINE + static PixelFormat GetPixelFormat() + { + return PixelFormat_RGB24; + } + + ORTHANC_FORCE_INLINE + static void SetZero(PixelType& target) + { + target.red_ = 0; + target.green_ = 0; + target.blue_ = 0; + } + + ORTHANC_FORCE_INLINE + static void Copy(PixelType& target, + const PixelType& source) + { + target.red_ = source.red_; + target.green_ = source.green_; + target.blue_ = source.blue_; + } + + ORTHANC_FORCE_INLINE + static bool IsEqual(const PixelType& a, + const PixelType& b) + { + return (a.red_ == b.red_ && + a.green_ == b.green_ && + a.blue_ == b.blue_); + } + + ORTHANC_FORCE_INLINE + static void FloatToPixel(PixelType& target, + float value) + { + uint8_t v; + PixelTraits<PixelFormat_Grayscale8>::FloatToPixel(v, value); + + target.red_ = v; + target.green_ = v; + target.blue_ = v; + } + }; + + + template <> + struct PixelTraits<PixelFormat_BGRA32> + { + struct PixelType + { + uint8_t blue_; + uint8_t green_; + uint8_t red_; + uint8_t alpha_; + }; + + ORTHANC_FORCE_INLINE + static PixelFormat GetPixelFormat() + { + return PixelFormat_BGRA32; + } + + ORTHANC_FORCE_INLINE + static void SetZero(PixelType& target) + { + target.blue_ = 0; + target.green_ = 0; + target.red_ = 0; + target.alpha_ = 0; + } + + ORTHANC_FORCE_INLINE + static void Copy(PixelType& target, + const PixelType& source) + { + target.blue_ = source.blue_; + target.green_ = source.green_; + target.red_ = source.red_; + target.alpha_ = source.alpha_; + } + + ORTHANC_FORCE_INLINE + static bool IsEqual(const PixelType& a, + const PixelType& b) + { + return (a.blue_ == b.blue_ && + a.green_ == b.green_ && + a.red_ == b.red_ && + a.alpha_ == b.alpha_); + } + + ORTHANC_FORCE_INLINE + static void FloatToPixel(PixelType& target, + float value) + { + uint8_t v; + PixelTraits<PixelFormat_Grayscale8>::FloatToPixel(v, value); + + target.blue_ = v; + target.green_ = v; + target.red_ = v; + target.alpha_ = 255; + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/PngReader.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,325 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "PngReader.h" + +#include "../OrthancException.h" +#include "../Toolbox.h" + +#if ORTHANC_SANDBOXED == 0 +# include "../SystemToolbox.h" +#endif + +#include <png.h> +#include <string.h> // For memcpy() + +namespace Orthanc +{ +#if ORTHANC_SANDBOXED == 0 + namespace + { + struct FileRabi + { + FILE* fp_; + + FileRabi(const char* filename) + { + fp_ = SystemToolbox::OpenFile(filename, FileMode_ReadBinary); + if (!fp_) + { + throw OrthancException(ErrorCode_InexistentFile); + } + } + + ~FileRabi() + { + if (fp_) + { + fclose(fp_); + } + } + }; + } +#endif + + + struct PngReader::PngRabi + { + png_structp png_; + png_infop info_; + png_infop endInfo_; + + void Destruct() + { + if (png_) + { + png_destroy_read_struct(&png_, &info_, &endInfo_); + + png_ = NULL; + info_ = NULL; + endInfo_ = NULL; + } + } + + PngRabi() + { + png_ = NULL; + info_ = NULL; + endInfo_ = NULL; + + png_ = png_create_read_struct(PNG_LIBPNG_VER_STRING, NULL, NULL, NULL); + if (!png_) + { + throw OrthancException(ErrorCode_NotEnoughMemory); + } + + info_ = png_create_info_struct(png_); + if (!info_) + { + png_destroy_read_struct(&png_, NULL, NULL); + throw OrthancException(ErrorCode_NotEnoughMemory); + } + + endInfo_ = png_create_info_struct(png_); + if (!info_) + { + png_destroy_read_struct(&png_, &info_, NULL); + throw OrthancException(ErrorCode_NotEnoughMemory); + } + } + + ~PngRabi() + { + Destruct(); + } + + static void MemoryCallback(png_structp png_ptr, + png_bytep data, + png_size_t size); + }; + + + void PngReader::CheckHeader(const void* header) + { + int is_png = !png_sig_cmp((png_bytep) header, 0, 8); + if (!is_png) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + } + + PngReader::PngReader() + { + } + + void PngReader::Read(PngRabi& rabi) + { + png_set_sig_bytes(rabi.png_, 8); + + png_read_info(rabi.png_, rabi.info_); + + png_uint_32 width, height; + int bit_depth, color_type, interlace_type; + int compression_type, filter_method; + // get size and bit-depth of the PNG-image + png_get_IHDR(rabi.png_, rabi.info_, + &width, &height, + &bit_depth, &color_type, &interlace_type, + &compression_type, &filter_method); + + PixelFormat format; + unsigned int pitch; + + if (color_type == PNG_COLOR_TYPE_GRAY && bit_depth == 8) + { + format = PixelFormat_Grayscale8; + pitch = width; + } + else if (color_type == PNG_COLOR_TYPE_GRAY && bit_depth == 16) + { + format = PixelFormat_Grayscale16; + pitch = 2 * width; + + if (Toolbox::DetectEndianness() == Endianness_Little) + { + png_set_swap(rabi.png_); + } + } + else if (color_type == PNG_COLOR_TYPE_RGB && bit_depth == 8) + { + format = PixelFormat_RGB24; + pitch = 3 * width; + } + else if (color_type == PNG_COLOR_TYPE_RGBA && bit_depth == 8) + { + format = PixelFormat_RGBA32; + pitch = 4 * width; + } + else + { + throw OrthancException(ErrorCode_NotImplemented); + } + + data_.resize(height * pitch); + + if (height == 0 || width == 0) + { + // Empty image, we are done + AssignEmpty(format); + return; + } + + png_read_update_info(rabi.png_, rabi.info_); + + std::vector<png_bytep> rows(height); + for (size_t i = 0; i < height; i++) + { + rows[i] = &data_[0] + i * pitch; + } + + png_read_image(rabi.png_, &rows[0]); + + AssignWritable(format, width, height, pitch, &data_[0]); + } + + +#if ORTHANC_SANDBOXED == 0 + void PngReader::ReadFromFile(const std::string& filename) + { + FileRabi f(filename.c_str()); + + char header[8]; + if (fread(header, 1, 8, f.fp_) != 8) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + + CheckHeader(header); + + PngRabi rabi; + + if (setjmp(png_jmpbuf(rabi.png_))) + { + rabi.Destruct(); + throw OrthancException(ErrorCode_BadFileFormat); + } + + png_init_io(rabi.png_, f.fp_); + + Read(rabi); + } +#endif + + + namespace + { + struct MemoryBuffer + { + const uint8_t* buffer_; + size_t size_; + size_t pos_; + bool ok_; + }; + } + + + void PngReader::PngRabi::MemoryCallback(png_structp png_ptr, + png_bytep outBytes, + png_size_t byteCountToRead) + { + MemoryBuffer* from = reinterpret_cast<MemoryBuffer*>(png_get_io_ptr(png_ptr)); + + if (!from->ok_) + { + return; + } + + if (from->pos_ + byteCountToRead > from->size_) + { + from->ok_ = false; + return; + } + + memcpy(outBytes, from->buffer_ + from->pos_, byteCountToRead); + + from->pos_ += byteCountToRead; + } + + + void PngReader::ReadFromMemory(const void* buffer, + size_t size) + { + if (size < 8) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + + CheckHeader(buffer); + + PngRabi rabi; + + if (setjmp(png_jmpbuf(rabi.png_))) + { + rabi.Destruct(); + throw OrthancException(ErrorCode_BadFileFormat); + } + + MemoryBuffer tmp; + tmp.buffer_ = reinterpret_cast<const uint8_t*>(buffer) + 8; // We skip the header + tmp.size_ = size - 8; + tmp.pos_ = 0; + tmp.ok_ = true; + + png_set_read_fn(rabi.png_, &tmp, PngRabi::MemoryCallback); + + Read(rabi); + + if (!tmp.ok_) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + } + + void PngReader::ReadFromMemory(const std::string& buffer) + { + if (buffer.size() != 0) + { + ReadFromMemory(&buffer[0], buffer.size()); + } + else + { + ReadFromMemory(NULL, 0); + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/PngReader.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,84 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(ORTHANC_ENABLE_PNG) +# error The macro ORTHANC_ENABLE_PNG must be defined +#endif + +#if ORTHANC_ENABLE_PNG != 1 +# error PNG support must be enabled to include this file +#endif + +#include "ImageAccessor.h" + +#include "../Enumerations.h" + +#include <vector> +#include <stdint.h> +#include <boost/shared_ptr.hpp> +#include <boost/noncopyable.hpp> + +#if !defined(ORTHANC_SANDBOXED) +# error The macro ORTHANC_SANDBOXED must be defined +#endif + +namespace Orthanc +{ + class PngReader : + public ImageAccessor, + public boost::noncopyable + { + private: + struct PngRabi; + + std::vector<uint8_t> data_; + + void CheckHeader(const void* header); + + void Read(PngRabi& rabi); + + public: + PngReader(); + +#if ORTHANC_SANDBOXED == 0 + void ReadFromFile(const std::string& filename); +#endif + + void ReadFromMemory(const void* buffer, + size_t size); + + void ReadFromMemory(const std::string& buffer); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/PngWriter.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,276 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "PngWriter.h" + +#include <vector> +#include <stdint.h> +#include <png.h> +#include "../OrthancException.h" +#include "../ChunkedBuffer.h" +#include "../Toolbox.h" + +#if ORTHANC_SANDBOXED == 0 +# include "../SystemToolbox.h" +#endif + + +// http://www.libpng.org/pub/png/libpng-1.2.5-manual.html#section-4 +// http://zarb.org/~gc/html/libpng.html +/* + void write_row_callback(png_ptr, png_uint_32 row, int pass) + { + }*/ + + + + +/* bool isError_; + +// http://www.libpng.org/pub/png/book/chapter14.html#png.ch14.div.2 + +static void ErrorHandler(png_structp png, png_const_charp message) +{ +printf("** [%s]\n", message); + +PngWriter* that = (PngWriter*) png_get_error_ptr(png); +that->isError_ = true; +printf("** %d\n", (int)that); + +//((PngWriter*) payload)->isError_ = true; +} + +static void WarningHandler(png_structp png, png_const_charp message) +{ + printf("++ %d\n", (int)message); +}*/ + + +namespace Orthanc +{ + struct PngWriter::PImpl + { + png_structp png_; + png_infop info_; + + // Filled by Prepare() + std::vector<uint8_t*> rows_; + int bitDepth_; + int colorType_; + }; + + + + PngWriter::PngWriter() : pimpl_(new PImpl) + { + pimpl_->png_ = NULL; + pimpl_->info_ = NULL; + + pimpl_->png_ = png_create_write_struct + (PNG_LIBPNG_VER_STRING, NULL, NULL, NULL); //this, ErrorHandler, WarningHandler); + if (!pimpl_->png_) + { + throw OrthancException(ErrorCode_NotEnoughMemory); + } + + pimpl_->info_ = png_create_info_struct(pimpl_->png_); + if (!pimpl_->info_) + { + png_destroy_write_struct(&pimpl_->png_, NULL); + throw OrthancException(ErrorCode_NotEnoughMemory); + } + } + + PngWriter::~PngWriter() + { + if (pimpl_->info_) + { + png_destroy_info_struct(pimpl_->png_, &pimpl_->info_); + } + + if (pimpl_->png_) + { + png_destroy_write_struct(&pimpl_->png_, NULL); + } + } + + + + void PngWriter::Prepare(unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer) + { + pimpl_->rows_.resize(height); + for (unsigned int y = 0; y < height; y++) + { + pimpl_->rows_[y] = const_cast<uint8_t*>(reinterpret_cast<const uint8_t*>(buffer)) + y * pitch; + } + + switch (format) + { + case PixelFormat_RGB24: + pimpl_->bitDepth_ = 8; + pimpl_->colorType_ = PNG_COLOR_TYPE_RGB; + break; + + case PixelFormat_RGBA32: + pimpl_->bitDepth_ = 8; + pimpl_->colorType_ = PNG_COLOR_TYPE_RGBA; + break; + + case PixelFormat_Grayscale8: + pimpl_->bitDepth_ = 8; + pimpl_->colorType_ = PNG_COLOR_TYPE_GRAY; + break; + + case PixelFormat_Grayscale16: + case PixelFormat_SignedGrayscale16: + pimpl_->bitDepth_ = 16; + pimpl_->colorType_ = PNG_COLOR_TYPE_GRAY; + break; + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + + void PngWriter::Compress(unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format) + { + png_set_IHDR(pimpl_->png_, pimpl_->info_, width, height, + pimpl_->bitDepth_, pimpl_->colorType_, PNG_INTERLACE_NONE, + PNG_COMPRESSION_TYPE_BASE, PNG_FILTER_TYPE_BASE); + + png_write_info(pimpl_->png_, pimpl_->info_); + + if (height > 0) + { + switch (format) + { + case PixelFormat_Grayscale16: + case PixelFormat_SignedGrayscale16: + { + int transforms = 0; + if (Toolbox::DetectEndianness() == Endianness_Little) + { + transforms = PNG_TRANSFORM_SWAP_ENDIAN; + } + + png_set_rows(pimpl_->png_, pimpl_->info_, &pimpl_->rows_[0]); + png_write_png(pimpl_->png_, pimpl_->info_, transforms, NULL); + + break; + } + + default: + png_write_image(pimpl_->png_, &pimpl_->rows_[0]); + } + } + + png_write_end(pimpl_->png_, NULL); + } + + +#if ORTHANC_SANDBOXED == 0 + void PngWriter::WriteToFileInternal(const std::string& filename, + unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer) + { + Prepare(width, height, pitch, format, buffer); + + FILE* fp = SystemToolbox::OpenFile(filename, FileMode_WriteBinary); + if (!fp) + { + throw OrthancException(ErrorCode_CannotWriteFile); + } + + png_init_io(pimpl_->png_, fp); + + if (setjmp(png_jmpbuf(pimpl_->png_))) + { + // Error during writing PNG + throw OrthancException(ErrorCode_CannotWriteFile); + } + + Compress(width, height, pitch, format); + + fclose(fp); + } +#endif + + + static void MemoryCallback(png_structp png_ptr, + png_bytep data, + png_size_t size) + { + ChunkedBuffer* buffer = reinterpret_cast<ChunkedBuffer*>(png_get_io_ptr(png_ptr)); + buffer->AddChunk(reinterpret_cast<const char*>(data), size); + } + + + +#if ORTHANC_SANDBOXED == 0 + void PngWriter::WriteToMemoryInternal(std::string& png, + unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer) + { + ChunkedBuffer chunks; + + Prepare(width, height, pitch, format, buffer); + + if (setjmp(png_jmpbuf(pimpl_->png_))) + { + // Error during writing PNG + throw OrthancException(ErrorCode_InternalError); + } + + png_set_write_fn(pimpl_->png_, &chunks, MemoryCallback, NULL); + + Compress(width, height, pitch, format); + + chunks.Flatten(png); + } +#endif +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Images/PngWriter.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,89 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(ORTHANC_ENABLE_PNG) +# error The macro ORTHANC_ENABLE_PNG must be defined +#endif + +#if ORTHANC_ENABLE_PNG != 1 +# error PNG support must be enabled to include this file +#endif + +#include "IImageWriter.h" + +#include <boost/shared_ptr.hpp> + +namespace Orthanc +{ + class PngWriter : public IImageWriter + { + protected: + virtual void WriteToFileInternal(const std::string& filename, + unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer); + +#if ORTHANC_SANDBOXED == 0 + virtual void WriteToMemoryInternal(std::string& png, + unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer); +#endif + + private: + struct PImpl; + boost::shared_ptr<PImpl> pimpl_; + + void Compress(unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format); + + void Prepare(unsigned int width, + unsigned int height, + unsigned int pitch, + PixelFormat format, + const void* buffer); + + public: + PngWriter(); + + ~PngWriter(); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Logging.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,603 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "PrecompiledHeaders.h" +#include "Logging.h" + +#if ORTHANC_ENABLE_LOGGING != 1 + +namespace Orthanc +{ + namespace Logging + { + void Initialize() + { + } + + void Finalize() + { + } + + void Reset() + { + } + + void Flush() + { + } + + void EnableInfoLevel(bool enabled) + { + } + + void EnableTraceLevel(bool enabled) + { + } + + void SetTargetFile(const std::string& path) + { + } + + void SetTargetFolder(const std::string& path) + { + } + } +} + + +#elif ORTHANC_ENABLE_LOGGING_PLUGIN == 1 + +/********************************************************* + * Logger compatible with the Orthanc plugin SDK + *********************************************************/ + +#include <boost/lexical_cast.hpp> + +namespace Orthanc +{ + namespace Logging + { + static OrthancPluginContext* context_ = NULL; + + void Initialize(OrthancPluginContext* context) + { + context_ = context; + } + + InternalLogger::InternalLogger(Level level, + const char* file /* ignored */, + int line /* ignored */) : + level_(level) + { + } + + InternalLogger::~InternalLogger() + { + if (context_ != NULL) + { + switch (level_) + { + case ERROR: + OrthancPluginLogError(context_, message_.c_str()); + break; + + case WARNING: + OrthancPluginLogWarning(context_, message_.c_str()); + break; + + case INFO: + OrthancPluginLogInfo(context_, message_.c_str()); + break; + + case TRACE: + // Not used by plugins + break; + + default: + { + std::string s = ("Unknown log level (" + boost::lexical_cast<std::string>(level_) + + ") for message: " + message_); + OrthancPluginLogError(context_, s.c_str()); + break; + } + } + } + } + } +} + + +#elif ORTHANC_ENABLE_LOGGING_STDIO == 1 + +/********************************************************* + * Logger compatible with <stdio.h> + *********************************************************/ + +#include <stdio.h> +#include <boost/lexical_cast.hpp> + +namespace Orthanc +{ + namespace Logging + { + static bool globalVerbose_ = false; + static bool globalTrace_ = false; + + InternalLogger::InternalLogger(Level level, + const char* file /* ignored */, + int line /* ignored */) : + level_(level) + { + } + + InternalLogger::~InternalLogger() + { + switch (level_) + { + case ERROR: + fprintf(stderr, "E: %s\n", message_.c_str()); + break; + + case WARNING: + fprintf(stdout, "W: %s\n", message_.c_str()); + break; + + case INFO: + if (globalVerbose_) + { + fprintf(stdout, "I: %s\n", message_.c_str()); + } + break; + + case TRACE: + if (globalTrace_) + { + fprintf(stdout, "T: %s\n", message_.c_str()); + } + break; + + default: + fprintf(stderr, "Unknown log level (%d) for message: %s\n", level_, message_.c_str()); + } + } + + void EnableInfoLevel(bool enabled) + { + globalVerbose_ = enabled; + } + + void EnableTraceLevel(bool enabled) + { + globalTrace_ = enabled; + } + } +} + + +#else /* ORTHANC_ENABLE_LOGGING_PLUGIN == 0 && + ORTHANC_ENABLE_LOGGING_STDIO == 0 && + ORTHANC_ENABLE_LOGGING == 1 */ + +/********************************************************* + * Internal logger of Orthanc, that mimics some + * behavior from Google Log. + *********************************************************/ + +#include "OrthancException.h" +#include "Enumerations.h" +#include "Toolbox.h" + +#if ORTHANC_SANDBOXED == 1 +# include <stdio.h> +#else +# include "SystemToolbox.h" +#endif + +#include <fstream> +#include <boost/filesystem.hpp> +#include <boost/thread.hpp> +#include <boost/date_time/posix_time/posix_time.hpp> + + +namespace +{ + struct LoggingContext + { + bool infoEnabled_; + bool traceEnabled_; + std::string targetFile_; + std::string targetFolder_; + + std::ostream* error_; + std::ostream* warning_; + std::ostream* info_; + + std::auto_ptr<std::ofstream> file_; + + LoggingContext() : + infoEnabled_(false), + traceEnabled_(false), + error_(&std::cerr), + warning_(&std::cerr), + info_(&std::cerr) + { + } + }; +} + + + +static std::auto_ptr<LoggingContext> loggingContext_; +static boost::mutex loggingMutex_; + + + +namespace Orthanc +{ + namespace Logging + { + static void GetLogPath(boost::filesystem::path& log, + boost::filesystem::path& link, + const std::string& suffix, + const std::string& directory) + { + /** + From Google Log documentation: + + Unless otherwise specified, logs will be written to the filename + "<program name>.<hostname>.<user name>.log<suffix>.", + followed by the date, time, and pid (you can't prevent the date, + time, and pid from being in the filename). + + In this implementation : "hostname" and "username" are not used + **/ + + boost::posix_time::ptime now = boost::posix_time::second_clock::local_time(); + boost::filesystem::path root(directory); + boost::filesystem::path exe(SystemToolbox::GetPathToExecutable()); + + if (!boost::filesystem::exists(root) || + !boost::filesystem::is_directory(root)) + { + throw OrthancException(ErrorCode_CannotWriteFile); + } + + char date[64]; + sprintf(date, "%04d%02d%02d-%02d%02d%02d.%d", + static_cast<int>(now.date().year()), + now.date().month().as_number(), + now.date().day().as_number(), + static_cast<int>(now.time_of_day().hours()), + static_cast<int>(now.time_of_day().minutes()), + static_cast<int>(now.time_of_day().seconds()), + SystemToolbox::GetProcessId()); + + std::string programName = exe.filename().replace_extension("").string(); + + log = (root / (programName + ".log" + suffix + "." + std::string(date))); + link = (root / (programName + ".log" + suffix)); + } + + + static void PrepareLogFolder(std::auto_ptr<std::ofstream>& file, + const std::string& suffix, + const std::string& directory) + { + boost::filesystem::path log, link; + GetLogPath(log, link, suffix, directory); + +#if !defined(_WIN32) && (defined(__unix__) || defined(__unix) || (defined(__APPLE__) && defined(__MACH__))) + boost::filesystem::remove(link); + boost::filesystem::create_symlink(log.filename(), link); +#endif + + file.reset(new std::ofstream(log.string().c_str())); + } + + + void Initialize() + { + boost::mutex::scoped_lock lock(loggingMutex_); + loggingContext_.reset(new LoggingContext); + } + + void Finalize() + { + boost::mutex::scoped_lock lock(loggingMutex_); + loggingContext_.reset(NULL); + } + + void Reset() + { + // Recover the old logging context + std::auto_ptr<LoggingContext> old; + + { + boost::mutex::scoped_lock lock(loggingMutex_); + if (loggingContext_.get() == NULL) + { + return; + } + else + { + old = loggingContext_; + + // Create a new logging context, + loggingContext_.reset(new LoggingContext); + } + } + + EnableInfoLevel(old->infoEnabled_); + EnableTraceLevel(old->traceEnabled_); + + if (!old->targetFolder_.empty()) + { + SetTargetFolder(old->targetFolder_); + } + else if (!old->targetFile_.empty()) + { + SetTargetFile(old->targetFile_); + } + } + + void EnableInfoLevel(bool enabled) + { + boost::mutex::scoped_lock lock(loggingMutex_); + assert(loggingContext_.get() != NULL); + + loggingContext_->infoEnabled_ = enabled; + + if (!enabled) + { + // Also disable the "TRACE" level when info-level debugging is disabled + loggingContext_->traceEnabled_ = false; + } + } + + void EnableTraceLevel(bool enabled) + { + boost::mutex::scoped_lock lock(loggingMutex_); + assert(loggingContext_.get() != NULL); + + loggingContext_->traceEnabled_ = enabled; + + if (enabled) + { + // Also enable the "INFO" level when trace-level debugging is enabled + loggingContext_->infoEnabled_ = true; + } + } + + + static void CheckFile(std::auto_ptr<std::ofstream>& f) + { + if (loggingContext_->file_.get() == NULL || + !loggingContext_->file_->is_open()) + { + throw OrthancException(ErrorCode_CannotWriteFile); + } + } + + void SetTargetFolder(const std::string& path) + { + boost::mutex::scoped_lock lock(loggingMutex_); + assert(loggingContext_.get() != NULL); + + PrepareLogFolder(loggingContext_->file_, "" /* no suffix */, path); + CheckFile(loggingContext_->file_); + + loggingContext_->targetFile_.clear(); + loggingContext_->targetFolder_ = path; + loggingContext_->warning_ = loggingContext_->file_.get(); + loggingContext_->error_ = loggingContext_->file_.get(); + loggingContext_->info_ = loggingContext_->file_.get(); + } + + + void SetTargetFile(const std::string& path) + { + boost::mutex::scoped_lock lock(loggingMutex_); + assert(loggingContext_.get() != NULL); + + loggingContext_->file_.reset(new std::ofstream(path.c_str(), std::fstream::app)); + CheckFile(loggingContext_->file_); + + loggingContext_->targetFile_ = path; + loggingContext_->targetFolder_.clear(); + loggingContext_->warning_ = loggingContext_->file_.get(); + loggingContext_->error_ = loggingContext_->file_.get(); + loggingContext_->info_ = loggingContext_->file_.get(); + } + + + InternalLogger::InternalLogger(const char* level, + const char* file, + int line) : + lock_(loggingMutex_), + stream_(&null_) // By default, logging to "/dev/null" is simulated + { + if (loggingContext_.get() == NULL) + { + fprintf(stderr, "ERROR: Trying to log a message after the finalization of the logging engine\n"); + return; + } + + try + { + LogLevel l = StringToLogLevel(level); + + if ((l == LogLevel_Info && !loggingContext_->infoEnabled_) || + (l == LogLevel_Trace && !loggingContext_->traceEnabled_)) + { + // This logging level is disabled, directly exit and unlock + // the mutex to speed-up things. The stream is set to "/dev/null" + lock_.unlock(); + return; + } + + // Compute the header of the line, temporary release the lock as + // this is a time-consuming operation + lock_.unlock(); + std::string header; + + { + boost::filesystem::path path(file); + boost::posix_time::ptime now = boost::posix_time::microsec_clock::local_time(); + boost::posix_time::time_duration duration = now.time_of_day(); + + /** + From Google Log documentation: + + "Log lines have this form: + + Lmmdd hh:mm:ss.uuuuuu threadid file:line] msg... + + where the fields are defined as follows: + + L A single character, representing the log level (eg 'I' for INFO) + mm The month (zero padded; ie May is '05') + dd The day (zero padded) + hh:mm:ss.uuuuuu Time in hours, minutes and fractional seconds + threadid The space-padded thread ID as returned by GetTID() (this matches the PID on Linux) + file The file name + line The line number + msg The user-supplied message" + + In this implementation, "threadid" is not printed. + **/ + + char date[32]; + sprintf(date, "%c%02d%02d %02d:%02d:%02d.%06d ", + level[0], + now.date().month().as_number(), + now.date().day().as_number(), + static_cast<int>(duration.hours()), + static_cast<int>(duration.minutes()), + static_cast<int>(duration.seconds()), + static_cast<int>(duration.fractional_seconds())); + + header = std::string(date) + path.filename().string() + ":" + boost::lexical_cast<std::string>(line) + "] "; + } + + + // The header is computed, we now re-lock the mutex to access + // the stream objects. Pay attention that "loggingContext_", + // "infoEnabled_" or "traceEnabled_" might have changed while + // the mutex was unlocked. + lock_.lock(); + + if (loggingContext_.get() == NULL) + { + fprintf(stderr, "ERROR: Trying to log a message after the finalization of the logging engine\n"); + return; + } + + switch (l) + { + case LogLevel_Error: + stream_ = loggingContext_->error_; + break; + + case LogLevel_Warning: + stream_ = loggingContext_->warning_; + break; + + case LogLevel_Info: + if (loggingContext_->infoEnabled_) + { + stream_ = loggingContext_->info_; + } + + break; + + case LogLevel_Trace: + if (loggingContext_->traceEnabled_) + { + stream_ = loggingContext_->info_; + } + + break; + + default: + throw OrthancException(ErrorCode_InternalError); + } + + if (stream_ == &null_) + { + // The logging is disabled for this level. The stream is the + // "null_" member of this object, so we can release the global + // mutex. + lock_.unlock(); + } + + (*stream_) << header; + } + catch (...) + { + // Something is going really wrong, probably running out of + // memory. Fallback to a degraded mode. + stream_ = loggingContext_->error_; + (*stream_) << "E???? ??:??:??.?????? ] "; + } + } + + + InternalLogger::~InternalLogger() + { + if (stream_ != &null_) + { +#if defined(_WIN32) + *stream_ << "\r\n"; +#else + *stream_ << "\n"; +#endif + + stream_->flush(); + } + } + + + void Flush() + { + boost::mutex::scoped_lock lock(loggingMutex_); + + if (loggingContext_.get() != NULL && + loggingContext_->file_.get() != NULL) + { + loggingContext_->file_->flush(); + } + } + } +} + +#endif // ORTHANC_ENABLE_LOGGING
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Logging.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,203 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <iostream> + +#if !defined(ORTHANC_ENABLE_LOGGING) +# error The macro ORTHANC_ENABLE_LOGGING must be defined +#endif + +#if !defined(ORTHANC_ENABLE_LOGGING_PLUGIN) +# if ORTHANC_ENABLE_LOGGING == 1 +# error The macro ORTHANC_ENABLE_LOGGING_PLUGIN must be defined +# else +# define ORTHANC_ENABLE_LOGGING_PLUGIN 0 +# endif +#endif + +#if !defined(ORTHANC_ENABLE_LOGGING_STDIO) +# if ORTHANC_ENABLE_LOGGING == 1 +# error The macro ORTHANC_ENABLE_LOGGING_STDIO must be defined +# else +# define ORTHANC_ENABLE_LOGGING_STDIO 0 +# endif +#endif + +#if ORTHANC_ENABLE_LOGGING_PLUGIN == 1 +# include <orthanc/OrthancCPlugin.h> +#endif + +namespace Orthanc +{ + namespace Logging + { +#if ORTHANC_ENABLE_LOGGING_PLUGIN == 1 + void Initialize(OrthancPluginContext* context); +#else + void Initialize(); +#endif + + void Finalize(); + + void Reset(); + + void Flush(); + + void EnableInfoLevel(bool enabled); + + void EnableTraceLevel(bool enabled); + + void SetTargetFile(const std::string& path); + + void SetTargetFolder(const std::string& path); + + struct NullStream : public std::ostream + { + NullStream() : + std::ios(0), + std::ostream(0) + { + } + + std::ostream& operator<< (const std::string& message) + { + return *this; + } + + // This overload fixes build problems with Visual Studio 2015 + std::ostream& operator<< (const char* message) + { + return *this; + } + }; + } +} + + +#if ORTHANC_ENABLE_LOGGING != 1 + +# define LOG(level) ::Orthanc::Logging::NullStream() +# define VLOG(level) ::Orthanc::Logging::NullStream() + + +#elif (ORTHANC_ENABLE_LOGGING_PLUGIN == 1 || \ + ORTHANC_ENABLE_LOGGING_STDIO == 1) + +# include <boost/noncopyable.hpp> +# include <boost/lexical_cast.hpp> +# define LOG(level) ::Orthanc::Logging::InternalLogger \ + (::Orthanc::Logging::level, __FILE__, __LINE__) +# define VLOG(level) ::Orthanc::Logging::InternalLogger \ + (::Orthanc::Logging::TRACE, __FILE__, __LINE__) + +namespace Orthanc +{ + namespace Logging + { + enum Level + { + ERROR, + WARNING, + INFO, + TRACE + }; + + class InternalLogger : public boost::noncopyable + { + private: + Level level_; + std::string message_; + + public: + InternalLogger(Level level, + const char* file, + int line); + + ~InternalLogger(); + + template <typename T> + InternalLogger& operator<< (T message) + { + message_ += boost::lexical_cast<std::string>(message); + return *this; + } + }; + } +} + + + + +#else /* ORTHANC_ENABLE_LOGGING_PLUGIN == 0 && + ORTHANC_ENABLE_LOGGING_STDIO == 0 && + ORTHANC_ENABLE_LOGGING == 1 */ + +# include <boost/thread/mutex.hpp> +# define LOG(level) ::Orthanc::Logging::InternalLogger(#level, __FILE__, __LINE__) +# define VLOG(level) ::Orthanc::Logging::InternalLogger("TRACE", __FILE__, __LINE__) + +namespace Orthanc +{ + namespace Logging + { + class InternalLogger + { + private: + boost::mutex::scoped_lock lock_; + NullStream null_; + std::ostream* stream_; + + public: + InternalLogger(const char* level, + const char* file, + int line); + + ~InternalLogger(); + + std::ostream& operator<< (const std::string& message) + { + return (*stream_) << message; + } + + // This overload fixes build problems with Visual Studio 2015 + std::ostream& operator<< (const char* message) + { + return (*stream_) << message; + } + }; + } +} + +#endif // ORTHANC_ENABLE_LOGGING
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/BagOfTasks.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,84 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "../ICommand.h" + +#include <list> +#include <cstddef> + +namespace Orthanc +{ + class BagOfTasks : public boost::noncopyable + { + private: + typedef std::list<ICommand*> Tasks; + + Tasks tasks_; + + public: + ~BagOfTasks() + { + for (Tasks::iterator it = tasks_.begin(); it != tasks_.end(); ++it) + { + delete *it; + } + } + + ICommand* Pop() + { + ICommand* task = tasks_.front(); + tasks_.pop_front(); + return task; + } + + void Push(ICommand* task) // Takes ownership + { + if (task != NULL) + { + tasks_.push_back(task); + } + } + + size_t GetSize() const + { + return tasks_.size(); + } + + bool IsEmpty() const + { + return tasks_.empty(); + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/BagOfTasksProcessor.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,277 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "BagOfTasksProcessor.h" + +#include "../Logging.h" +#include "../OrthancException.h" + +#include <stdio.h> + +namespace Orthanc +{ + class BagOfTasksProcessor::Task : public IDynamicObject + { + private: + uint64_t bag_; + std::auto_ptr<ICommand> command_; + + public: + Task(uint64_t bag, + ICommand* command) : + bag_(bag), + command_(command) + { + } + + bool Execute() + { + try + { + return command_->Execute(); + } + catch (OrthancException& e) + { + LOG(ERROR) << "Exception while processing a bag of tasks: " << e.What(); + return false; + } + catch (std::runtime_error& e) + { + LOG(ERROR) << "Runtime exception while processing a bag of tasks: " << e.what(); + return false; + } + catch (...) + { + LOG(ERROR) << "Native exception while processing a bag of tasks"; + return false; + } + } + + uint64_t GetBag() + { + return bag_; + } + }; + + + void BagOfTasksProcessor::SignalProgress(Task& task, + Bag& bag) + { + assert(bag.done_ < bag.size_); + + bag.done_ += 1; + + if (bag.done_ == bag.size_) + { + exitStatus_[task.GetBag()] = (bag.status_ == BagStatus_Running); + bagFinished_.notify_all(); + } + } + + void BagOfTasksProcessor::Worker(BagOfTasksProcessor* that) + { + while (that->continue_) + { + std::auto_ptr<IDynamicObject> obj(that->queue_.Dequeue(100)); + if (obj.get() != NULL) + { + Task& task = *dynamic_cast<Task*>(obj.get()); + + { + boost::mutex::scoped_lock lock(that->mutex_); + + Bags::iterator bag = that->bags_.find(task.GetBag()); + assert(bag != that->bags_.end()); + assert(bag->second.done_ < bag->second.size_); + + if (bag->second.status_ != BagStatus_Running) + { + // Do not execute this task, as its parent bag of tasks + // has failed or is tagged as canceled + that->SignalProgress(task, bag->second); + continue; + } + } + + bool success = task.Execute(); + + { + boost::mutex::scoped_lock lock(that->mutex_); + + Bags::iterator bag = that->bags_.find(task.GetBag()); + assert(bag != that->bags_.end()); + + if (!success) + { + bag->second.status_ = BagStatus_Failed; + } + + that->SignalProgress(task, bag->second); + } + } + } + } + + + void BagOfTasksProcessor::Cancel(int64_t bag) + { + boost::mutex::scoped_lock lock(mutex_); + + Bags::iterator it = bags_.find(bag); + if (it != bags_.end()) + { + it->second.status_ = BagStatus_Canceled; + } + } + + + bool BagOfTasksProcessor::Join(int64_t bag) + { + boost::mutex::scoped_lock lock(mutex_); + + while (continue_) + { + ExitStatus::iterator it = exitStatus_.find(bag); + if (it == exitStatus_.end()) // The bag is still running + { + bagFinished_.wait(lock); + } + else + { + bool status = it->second; + exitStatus_.erase(it); + return status; + } + } + + return false; // The processor is stopping + } + + + float BagOfTasksProcessor::GetProgress(int64_t bag) + { + boost::mutex::scoped_lock lock(mutex_); + + Bags::const_iterator it = bags_.find(bag); + if (it == bags_.end()) + { + // The bag of tasks has finished + return 1.0f; + } + else + { + return (static_cast<float>(it->second.done_) / + static_cast<float>(it->second.size_)); + } + } + + + bool BagOfTasksProcessor::Handle::Join() + { + if (hasJoined_) + { + return status_; + } + else + { + status_ = that_.Join(bag_); + hasJoined_ = true; + return status_; + } + } + + + BagOfTasksProcessor::BagOfTasksProcessor(size_t countThreads) : + countBags_(0), + continue_(true) + { + if (countThreads == 0) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + threads_.resize(countThreads); + + for (size_t i = 0; i < threads_.size(); i++) + { + threads_[i] = new boost::thread(Worker, this); + } + } + + + BagOfTasksProcessor::~BagOfTasksProcessor() + { + continue_ = false; + + bagFinished_.notify_all(); // Wakes up all the pending "Join()" + + for (size_t i = 0; i < threads_.size(); i++) + { + if (threads_[i]) + { + if (threads_[i]->joinable()) + { + threads_[i]->join(); + } + + delete threads_[i]; + threads_[i] = NULL; + } + } + } + + + BagOfTasksProcessor::Handle* BagOfTasksProcessor::Submit(BagOfTasks& tasks) + { + if (tasks.GetSize() == 0) + { + return new Handle(*this, 0, true); + } + + boost::mutex::scoped_lock lock(mutex_); + + uint64_t id = countBags_; + countBags_ += 1; + + Bag bag(tasks.GetSize()); + bags_[id] = bag; + + while (!tasks.IsEmpty()) + { + queue_.Enqueue(new Task(id, tasks.Pop())); + } + + return new Handle(*this, id, false); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/BagOfTasksProcessor.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,150 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "BagOfTasks.h" +#include "SharedMessageQueue.h" + +#include <stdint.h> +#include <map> + +namespace Orthanc +{ + class BagOfTasksProcessor : public boost::noncopyable + { + private: + enum BagStatus + { + BagStatus_Running, + BagStatus_Canceled, + BagStatus_Failed + }; + + + struct Bag + { + size_t size_; + size_t done_; + BagStatus status_; + + Bag() : + size_(0), + done_(0), + status_(BagStatus_Failed) + { + } + + explicit Bag(size_t size) : + size_(size), + done_(0), + status_(BagStatus_Running) + { + } + }; + + class Task; + + + typedef std::map<uint64_t, Bag> Bags; + typedef std::map<uint64_t, bool> ExitStatus; + + SharedMessageQueue queue_; + + boost::mutex mutex_; + uint64_t countBags_; + Bags bags_; + std::vector<boost::thread*> threads_; + ExitStatus exitStatus_; + bool continue_; + + boost::condition_variable bagFinished_; + + static void Worker(BagOfTasksProcessor* that); + + void Cancel(int64_t bag); + + bool Join(int64_t bag); + + float GetProgress(int64_t bag); + + void SignalProgress(Task& task, + Bag& bag); + + public: + class Handle : public boost::noncopyable + { + friend class BagOfTasksProcessor; + + private: + BagOfTasksProcessor& that_; + uint64_t bag_; + bool hasJoined_; + bool status_; + + Handle(BagOfTasksProcessor& that, + uint64_t bag, + bool empty) : + that_(that), + bag_(bag), + hasJoined_(empty) + { + } + + public: + ~Handle() + { + Join(); + } + + void Cancel() + { + that_.Cancel(bag_); + } + + bool Join(); + + float GetProgress() + { + return that_.GetProgress(bag_); + } + }; + + + explicit BagOfTasksProcessor(size_t countThreads); + + ~BagOfTasksProcessor(); + + Handle* Submit(BagOfTasks& tasks); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/ILockable.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,54 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <boost/noncopyable.hpp> + +namespace Orthanc +{ + class ILockable : public boost::noncopyable + { + friend class Locker; + + protected: + virtual void Lock() = 0; + + virtual void Unlock() = 0; + + public: + virtual ~ILockable() + { + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/IRunnableBySteps.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,56 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "../IDynamicObject.h" + +namespace Orthanc +{ + class IRunnableBySteps : public IDynamicObject + { + public: + virtual ~IRunnableBySteps() + { + } + + // Must return "true" if the runnable wishes to continue. Must + // return "false" if the runnable has not finished its job. + virtual bool Step() = 0; + + static void RunUntilDone(IRunnableBySteps& runnable) + { + while (runnable.Step()); + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/Mutex.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,122 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "Mutex.h" + +#include "../OrthancException.h" + +#if defined(_WIN32) +#include <windows.h> +#elif defined(__linux__) || defined(__FreeBSD_kernel__) || defined(__APPLE__) || defined(__FreeBSD__) || defined(__OpenBSD__) +#include <pthread.h> +#else +#error Support your platform here +#endif + +namespace Orthanc +{ +#if defined (_WIN32) + + struct Mutex::PImpl + { + CRITICAL_SECTION criticalSection_; + }; + + Mutex::Mutex() + { + pimpl_ = new PImpl; + ::InitializeCriticalSection(&pimpl_->criticalSection_); + } + + Mutex::~Mutex() + { + ::DeleteCriticalSection(&pimpl_->criticalSection_); + delete pimpl_; + } + + void Mutex::Lock() + { + ::EnterCriticalSection(&pimpl_->criticalSection_); + } + + void Mutex::Unlock() + { + ::LeaveCriticalSection(&pimpl_->criticalSection_); + } + + +#elif defined(__linux__) || defined(__FreeBSD_kernel__) || defined(__APPLE__) || defined(__FreeBSD__) || defined(__OpenBSD__) + + struct Mutex::PImpl + { + pthread_mutex_t mutex_; + }; + + Mutex::Mutex() + { + pimpl_ = new PImpl; + + if (pthread_mutex_init(&pimpl_->mutex_, NULL) != 0) + { + delete pimpl_; + throw OrthancException(ErrorCode_InternalError); + } + } + + Mutex::~Mutex() + { + pthread_mutex_destroy(&pimpl_->mutex_); + delete pimpl_; + } + + void Mutex::Lock() + { + if (pthread_mutex_lock(&pimpl_->mutex_) != 0) + { + throw OrthancException(ErrorCode_InternalError); + } + } + + void Mutex::Unlock() + { + if (pthread_mutex_unlock(&pimpl_->mutex_) != 0) + { + throw OrthancException(ErrorCode_InternalError); + } + } + +#else +#error Support your plateform here +#endif +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/Mutex.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,57 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "ILockable.h" + +namespace Orthanc +{ + class Mutex : public ILockable + { + private: + struct PImpl; + + PImpl *pimpl_; + + protected: + virtual void Lock(); + + virtual void Unlock(); + + public: + Mutex(); + + ~Mutex(); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/ReaderWriterLock.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,126 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "ReaderWriterLock.h" + +#include <boost/thread/shared_mutex.hpp> + +namespace Orthanc +{ + namespace + { + // Anonymous namespace to avoid clashes between compilation + // modules. + + class ReaderLockable : public ILockable + { + private: + boost::shared_mutex& lock_; + + protected: + virtual void Lock() + { + lock_.lock_shared(); + } + + virtual void Unlock() + { + lock_.unlock_shared(); + } + + public: + explicit ReaderLockable(boost::shared_mutex& lock) : lock_(lock) + { + } + }; + + + class WriterLockable : public ILockable + { + private: + boost::shared_mutex& lock_; + + protected: + virtual void Lock() + { + lock_.lock(); + } + + virtual void Unlock() + { + lock_.unlock(); + } + + public: + explicit WriterLockable(boost::shared_mutex& lock) : lock_(lock) + { + } + }; + } + + struct ReaderWriterLock::PImpl + { + boost::shared_mutex lock_; + ReaderLockable reader_; + WriterLockable writer_; + + PImpl() : reader_(lock_), writer_(lock_) + { + } + }; + + + ReaderWriterLock::ReaderWriterLock() + { + pimpl_ = new PImpl; + } + + + ReaderWriterLock::~ReaderWriterLock() + { + delete pimpl_; + } + + + ILockable& ReaderWriterLock::ForReader() + { + return pimpl_->reader_; + } + + + ILockable& ReaderWriterLock::ForWriter() + { + return pimpl_->writer_; + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/ReaderWriterLock.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,58 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "ILockable.h" + +#include <boost/noncopyable.hpp> + +namespace Orthanc +{ + class ReaderWriterLock : public boost::noncopyable + { + private: + struct PImpl; + + PImpl *pimpl_; + + public: + ReaderWriterLock(); + + virtual ~ReaderWriterLock(); + + ILockable& ForReader(); + + ILockable& ForWriter(); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/RunnableWorkersPool.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,170 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "RunnableWorkersPool.h" + +#include "SharedMessageQueue.h" +#include "../OrthancException.h" +#include "../Logging.h" + +namespace Orthanc +{ + struct RunnableWorkersPool::PImpl + { + class Worker + { + private: + const bool& continue_; + SharedMessageQueue& queue_; + boost::thread thread_; + + static void WorkerThread(Worker* that) + { + while (that->continue_) + { + try + { + std::auto_ptr<IDynamicObject> obj(that->queue_.Dequeue(100)); + if (obj.get() != NULL) + { + IRunnableBySteps& runnable = *dynamic_cast<IRunnableBySteps*>(obj.get()); + + bool wishToContinue = runnable.Step(); + + if (wishToContinue) + { + // The runnable wishes to continue, reinsert it at the beginning of the queue + that->queue_.Enqueue(obj.release()); + } + } + } + catch (OrthancException& e) + { + LOG(ERROR) << "Exception while handling some runnable object: " << e.What(); + } + catch (std::bad_alloc&) + { + LOG(ERROR) << "Not enough memory to handle some runnable object"; + } + catch (std::exception& e) + { + LOG(ERROR) << "std::exception while handling some runnable object: " << e.what(); + } + catch (...) + { + LOG(ERROR) << "Native exception while handling some runnable object"; + } + } + } + + public: + Worker(const bool& globalContinue, + SharedMessageQueue& queue) : + continue_(globalContinue), + queue_(queue) + { + thread_ = boost::thread(WorkerThread, this); + } + + void Join() + { + if (thread_.joinable()) + { + thread_.join(); + } + } + }; + + + bool continue_; + std::vector<Worker*> workers_; + SharedMessageQueue queue_; + }; + + + + RunnableWorkersPool::RunnableWorkersPool(size_t countWorkers) : pimpl_(new PImpl) + { + pimpl_->continue_ = true; + + if (countWorkers == 0) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + pimpl_->workers_.resize(countWorkers); + + for (size_t i = 0; i < countWorkers; i++) + { + pimpl_->workers_[i] = new PImpl::Worker(pimpl_->continue_, pimpl_->queue_); + } + } + + + void RunnableWorkersPool::Stop() + { + if (pimpl_->continue_) + { + pimpl_->continue_ = false; + + for (size_t i = 0; i < pimpl_->workers_.size(); i++) + { + PImpl::Worker* worker = pimpl_->workers_[i]; + + if (worker != NULL) + { + worker->Join(); + delete worker; + } + } + } + } + + + RunnableWorkersPool::~RunnableWorkersPool() + { + Stop(); + } + + + void RunnableWorkersPool::Add(IRunnableBySteps* runnable) + { + if (!pimpl_->continue_) + { + throw OrthancException(ErrorCode_BadSequenceOfCalls); + } + + pimpl_->queue_.Enqueue(runnable); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/RunnableWorkersPool.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,57 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "IRunnableBySteps.h" + +#include <boost/shared_ptr.hpp> + +namespace Orthanc +{ + class RunnableWorkersPool : public boost::noncopyable + { + private: + struct PImpl; + boost::shared_ptr<PImpl> pimpl_; + + void Stop(); + + public: + explicit RunnableWorkersPool(size_t countWorkers); + + ~RunnableWorkersPool(); + + void Add(IRunnableBySteps* runnable); // Takes the ownership + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/Semaphore.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,65 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "Semaphore.h" + +#include "../OrthancException.h" + + +namespace Orthanc +{ + Semaphore::Semaphore(unsigned int count) : count_(count) + { + } + + void Semaphore::Release() + { + boost::mutex::scoped_lock lock(mutex_); + + count_++; + condition_.notify_one(); + } + + void Semaphore::Acquire() + { + boost::mutex::scoped_lock lock(mutex_); + + while (count_ == 0) + { + condition_.wait(lock); + } + + count_++; + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/Semaphore.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,73 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <boost/noncopyable.hpp> +#include <boost/thread.hpp> + +namespace Orthanc +{ + class Semaphore : public boost::noncopyable + { + private: + unsigned int count_; + boost::mutex mutex_; + boost::condition_variable condition_; + + public: + explicit Semaphore(unsigned int count); + + void Release(); + + void Acquire(); + + class Locker : public boost::noncopyable + { + private: + Semaphore& that_; + + public: + explicit Locker(Semaphore& that) : + that_(that) + { + that_.Acquire(); + } + + ~Locker() + { + that_.Release(); + } + }; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/SharedMessageQueue.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,209 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "../PrecompiledHeaders.h" +#include "SharedMessageQueue.h" + + + +/** + * FIFO (queue): + * + * back front + * +--+--+--+--+--+--+--+--+--+--+--+ + * Enqueue -> | | | | | | | | | | | | + * | | | | | | | | | | | | -> Dequeue + * +--+--+--+--+--+--+--+--+--+--+--+ + * ^ + * | + * Make room here + * + * + * LIFO (stack): + * + * back front + * +--+--+--+--+--+--+--+--+--+--+--+ + * | | | | | | | | | | | | <- Enqueue + * | | | | | | | | | | | | -> Dequeue + * +--+--+--+--+--+--+--+--+--+--+--+ + * ^ + * | + * Make room here + **/ + + +namespace Orthanc +{ + SharedMessageQueue::SharedMessageQueue(unsigned int maxSize) : + isFifo_(true), + maxSize_(maxSize) + { + } + + + SharedMessageQueue::~SharedMessageQueue() + { + for (Queue::iterator it = queue_.begin(); it != queue_.end(); ++it) + { + delete *it; + } + } + + + void SharedMessageQueue::Enqueue(IDynamicObject* message) + { + boost::mutex::scoped_lock lock(mutex_); + + if (maxSize_ != 0 && queue_.size() > maxSize_) + { + if (isFifo_) + { + // Too many elements in the queue: Make room + delete queue_.front(); + queue_.pop_front(); + } + else + { + // Too many elements in the stack: Make room + delete queue_.back(); + queue_.pop_back(); + } + } + + if (isFifo_) + { + // Queue policy (FIFO) + queue_.push_back(message); + } + else + { + // Stack policy (LIFO) + queue_.push_front(message); + } + + elementAvailable_.notify_one(); + } + + + IDynamicObject* SharedMessageQueue::Dequeue(int32_t millisecondsTimeout) + { + boost::mutex::scoped_lock lock(mutex_); + + // Wait for a message to arrive in the FIFO queue + while (queue_.empty()) + { + if (millisecondsTimeout == 0) + { + elementAvailable_.wait(lock); + } + else + { + bool success = elementAvailable_.timed_wait + (lock, boost::posix_time::milliseconds(millisecondsTimeout)); + if (!success) + { + return NULL; + } + } + } + + std::auto_ptr<IDynamicObject> message(queue_.front()); + queue_.pop_front(); + + if (queue_.empty()) + { + emptied_.notify_all(); + } + + return message.release(); + } + + + + bool SharedMessageQueue::WaitEmpty(int32_t millisecondsTimeout) + { + boost::mutex::scoped_lock lock(mutex_); + + // Wait for the queue to become empty + while (!queue_.empty()) + { + if (millisecondsTimeout == 0) + { + emptied_.wait(lock); + } + else + { + if (!emptied_.timed_wait + (lock, boost::posix_time::milliseconds(millisecondsTimeout))) + { + return false; + } + } + } + + return true; + } + + + void SharedMessageQueue::SetFifoPolicy() + { + boost::mutex::scoped_lock lock(mutex_); + isFifo_ = true; + } + + void SharedMessageQueue::SetLifoPolicy() + { + boost::mutex::scoped_lock lock(mutex_); + isFifo_ = false; + } + + void SharedMessageQueue::Clear() + { + boost::mutex::scoped_lock lock(mutex_); + + if (queue_.empty()) + { + return; + } + else + { + while (!queue_.empty()) + { + std::auto_ptr<IDynamicObject> message(queue_.front()); + queue_.pop_front(); + } + + emptied_.notify_all(); + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/MultiThreading/SharedMessageQueue.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,85 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "../IDynamicObject.h" + +#include <stdint.h> +#include <list> +#include <boost/thread.hpp> + +namespace Orthanc +{ + class SharedMessageQueue : public boost::noncopyable + { + private: + typedef std::list<IDynamicObject*> Queue; + + bool isFifo_; + unsigned int maxSize_; + Queue queue_; + boost::mutex mutex_; + boost::condition_variable elementAvailable_; + boost::condition_variable emptied_; + + public: + explicit SharedMessageQueue(unsigned int maxSize = 0); + + ~SharedMessageQueue(); + + // This transfers the ownership of the message + void Enqueue(IDynamicObject* message); + + // The caller is responsible to delete the dequeud message! + IDynamicObject* Dequeue(int32_t millisecondsTimeout); + + bool WaitEmpty(int32_t millisecondsTimeout); + + bool IsFifoPolicy() const + { + return isFifo_; + } + + bool IsLifoPolicy() const + { + return !isFifo_; + } + + void SetFifoPolicy(); + + void SetLifoPolicy(); + + void Clear(); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/OrthancException.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,77 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <stdint.h> +#include <string> +#include "Enumerations.h" + +namespace Orthanc +{ + class OrthancException + { + protected: + ErrorCode errorCode_; + HttpStatus httpStatus_; + + public: + explicit OrthancException(ErrorCode errorCode) : + errorCode_(errorCode), + httpStatus_(ConvertErrorCodeToHttpStatus(errorCode)) + { + } + + OrthancException(ErrorCode errorCode, + HttpStatus httpStatus) : + errorCode_(errorCode), + httpStatus_(httpStatus) + { + } + + ErrorCode GetErrorCode() const + { + return errorCode_; + } + + HttpStatus GetHttpStatus() const + { + return httpStatus_; + } + + const char* What() const + { + return EnumerationToString(errorCode_); + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/PrecompiledHeaders.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,34 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "PrecompiledHeaders.h"
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/PrecompiledHeaders.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,76 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if defined(_WIN32) && !defined(NOMINMAX) +#define NOMINMAX +#endif + +#if ORTHANC_USE_PRECOMPILED_HEADERS == 1 + +#include <boost/date_time/posix_time/posix_time.hpp> +#include <boost/filesystem.hpp> +#include <boost/lexical_cast.hpp> +#include <boost/locale.hpp> +#include <boost/regex.hpp> +#include <boost/thread.hpp> +#include <boost/thread/shared_mutex.hpp> + +#include <json/value.h> + +#if ORTHANC_ENABLE_PUGIXML == 1 +# include <pugixml.hpp> +#endif + +#include "Enumerations.h" +#include "Logging.h" +#include "OrthancException.h" +#include "Toolbox.h" + +#if ORTHANC_ENABLE_DCMTK == 1 +// Headers from DCMTK used in Orthanc headers +# include <dcmtk/dcmdata/dcdatset.h> +# include <dcmtk/dcmdata/dcfilefo.h> +# include <dcmtk/dcmdata/dcmetinf.h> +# include <dcmtk/dcmdata/dcpixseq.h> +#endif + +#if ORTHANC_ENABLE_DCMTK_NETWORKING == 1 +# include "DicomNetworking/DicomServer.h" + +// Headers from DCMTK used in Orthanc headers +# include <dcmtk/dcmnet/dimse.h> +#endif + +#endif
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/SharedLibrary.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,136 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "PrecompiledHeaders.h" +#include "SharedLibrary.h" + +#include "Logging.h" +#include "OrthancException.h" + +#include <boost/filesystem.hpp> + +#if defined(_WIN32) +#include <windows.h> +#elif defined(__linux__) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__) || defined(__OpenBSD__) +#include <dlfcn.h> +#else +#error Support your platform here +#endif + +namespace Orthanc +{ + SharedLibrary::SharedLibrary(const std::string& path) : + path_(path), + handle_(NULL) + { +#if defined(_WIN32) + handle_ = ::LoadLibraryA(path_.c_str()); + if (handle_ == NULL) + { + LOG(ERROR) << "LoadLibrary(" << path_ << ") failed: Error " << ::GetLastError(); + throw OrthancException(ErrorCode_SharedLibrary); + } + +#elif defined(__linux__) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__) || defined(__OpenBSD__) + handle_ = ::dlopen(path_.c_str(), RTLD_NOW); + if (handle_ == NULL) + { + std::string explanation; + const char *tmp = ::dlerror(); + if (tmp) + { + explanation = ": Error " + std::string(tmp); + } + + LOG(ERROR) << "dlopen(" << path_ << ") failed" << explanation; + throw OrthancException(ErrorCode_SharedLibrary); + } + +#else +#error Support your platform here +#endif + } + + SharedLibrary::~SharedLibrary() + { + if (handle_) + { +#if defined(_WIN32) + ::FreeLibrary((HMODULE)handle_); +#elif defined(__linux__) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__) || defined(__OpenBSD__) + ::dlclose(handle_); +#else +#error Support your platform here +#endif + } + } + + + SharedLibrary::FunctionPointer SharedLibrary::GetFunctionInternal(const std::string& name) + { + if (!handle_) + { + throw OrthancException(ErrorCode_InternalError); + } + +#if defined(_WIN32) + return ::GetProcAddress((HMODULE)handle_, name.c_str()); +#elif defined(__linux__) || (defined(__APPLE__) && defined(__MACH__)) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__) || defined(__OpenBSD__) + return ::dlsym(handle_, name.c_str()); +#else +#error Support your platform here +#endif + } + + + SharedLibrary::FunctionPointer SharedLibrary::GetFunction(const std::string& name) + { + SharedLibrary::FunctionPointer result = GetFunctionInternal(name); + + if (result == NULL) + { + LOG(ERROR) << "Shared library does not expose function \"" << name << "\""; + throw OrthancException(ErrorCode_SharedLibrary); + } + else + { + return result; + } + } + + + bool SharedLibrary::HasFunction(const std::string& name) + { + return GetFunctionInternal(name) != NULL; + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/SharedLibrary.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,82 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(ORTHANC_SANDBOXED) +# error The macro ORTHANC_SANDBOXED must be defined +#endif + +#if ORTHANC_SANDBOXED == 1 +# error The namespace SystemToolbox cannot be used in sandboxed environments +#endif + +#if defined(_WIN32) +#include <windows.h> +#endif + +#include <string> +#include <boost/noncopyable.hpp> + +namespace Orthanc +{ + class SharedLibrary : public boost::noncopyable + { + public: +#if defined(_WIN32) + typedef FARPROC FunctionPointer; +#else + typedef void* FunctionPointer; +#endif + + private: + std::string path_; + void *handle_; + + FunctionPointer GetFunctionInternal(const std::string& name); + + public: + explicit SharedLibrary(const std::string& path); + + ~SharedLibrary(); + + const std::string& GetPath() const + { + return path_; + } + + bool HasFunction(const std::string& name); + + FunctionPointer GetFunction(const std::string& name); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/SystemToolbox.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,598 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "PrecompiledHeaders.h" +#include "SystemToolbox.h" + + +#if defined(_WIN32) +# include <windows.h> +# include <process.h> // For "_spawnvp()" and "_getpid()" +#else +# include <unistd.h> // For "execvp()" +# include <sys/wait.h> // For "waitpid()" +#endif + + +#if defined(__APPLE__) && defined(__MACH__) +# include <mach-o/dyld.h> /* _NSGetExecutablePath */ +# include <limits.h> /* PATH_MAX */ +#endif + + +#if defined(__linux__) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__) +# include <limits.h> /* PATH_MAX */ +# include <signal.h> +# include <unistd.h> +#endif + + +#if defined(__OpenBSD__) +# include <sys/sysctl.h> // For "sysctl", "CTL_KERN" and "KERN_PROC_ARGS" +#endif + + +// Inclusions for UUID +// http://stackoverflow.com/a/1626302 + +extern "C" +{ +#if defined(_WIN32) +# include <rpc.h> +#else +# include <uuid/uuid.h> +#endif +} + + +#include "Logging.h" +#include "OrthancException.h" +#include "Toolbox.h" + +#include <boost/filesystem.hpp> +#include <boost/filesystem/fstream.hpp> +#include <boost/date_time/posix_time/posix_time.hpp> + + +namespace Orthanc +{ + static bool finish_; + static ServerBarrierEvent barrierEvent_; + +#if defined(_WIN32) + static BOOL WINAPI ConsoleControlHandler(DWORD dwCtrlType) + { + // http://msdn.microsoft.com/en-us/library/ms683242(v=vs.85).aspx + finish_ = true; + return true; + } +#else + static void SignalHandler(int signal) + { + if (signal == SIGHUP) + { + barrierEvent_ = ServerBarrierEvent_Reload; + } + + finish_ = true; + } +#endif + + + static ServerBarrierEvent ServerBarrierInternal(const bool* stopFlag) + { +#if defined(_WIN32) + SetConsoleCtrlHandler(ConsoleControlHandler, true); +#else + signal(SIGINT, SignalHandler); + signal(SIGQUIT, SignalHandler); + signal(SIGTERM, SignalHandler); + signal(SIGHUP, SignalHandler); +#endif + + // Active loop that awakens every 100ms + finish_ = false; + barrierEvent_ = ServerBarrierEvent_Stop; + while (!(*stopFlag || finish_)) + { + SystemToolbox::USleep(100 * 1000); + } + +#if defined(_WIN32) + SetConsoleCtrlHandler(ConsoleControlHandler, false); +#else + signal(SIGINT, NULL); + signal(SIGQUIT, NULL); + signal(SIGTERM, NULL); + signal(SIGHUP, NULL); +#endif + + return barrierEvent_; + } + + + ServerBarrierEvent SystemToolbox::ServerBarrier(const bool& stopFlag) + { + return ServerBarrierInternal(&stopFlag); + } + + + ServerBarrierEvent SystemToolbox::ServerBarrier() + { + const bool stopFlag = false; + return ServerBarrierInternal(&stopFlag); + } + + + void SystemToolbox::USleep(uint64_t microSeconds) + { +#if defined(_WIN32) + ::Sleep(static_cast<DWORD>(microSeconds / static_cast<uint64_t>(1000))); +#elif defined(__linux__) || defined(__APPLE__) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__) || defined(__OpenBSD__) || defined(__native_client__) + usleep(microSeconds); +#else +#error Support your platform here +#endif + } + + + static std::streamsize GetStreamSize(std::istream& f) + { + // http://www.cplusplus.com/reference/iostream/istream/tellg/ + f.seekg(0, std::ios::end); + std::streamsize size = f.tellg(); + f.seekg(0, std::ios::beg); + + return size; + } + + + void SystemToolbox::ReadFile(std::string& content, + const std::string& path) + { + if (!IsRegularFile(path)) + { + LOG(ERROR) << std::string("The path does not point to a regular file: ") << path; + throw OrthancException(ErrorCode_RegularFileExpected); + } + + boost::filesystem::ifstream f; + f.open(path, std::ifstream::in | std::ifstream::binary); + if (!f.good()) + { + throw OrthancException(ErrorCode_InexistentFile); + } + + std::streamsize size = GetStreamSize(f); + content.resize(static_cast<size_t>(size)); + if (size != 0) + { + f.read(reinterpret_cast<char*>(&content[0]), size); + } + + f.close(); + } + + + bool SystemToolbox::ReadHeader(std::string& header, + const std::string& path, + size_t headerSize) + { + if (!IsRegularFile(path)) + { + LOG(ERROR) << std::string("The path does not point to a regular file: ") << path; + throw OrthancException(ErrorCode_RegularFileExpected); + } + + boost::filesystem::ifstream f; + f.open(path, std::ifstream::in | std::ifstream::binary); + if (!f.good()) + { + throw OrthancException(ErrorCode_InexistentFile); + } + + bool full = true; + + { + std::streamsize size = GetStreamSize(f); + if (size <= 0) + { + headerSize = 0; + full = false; + } + else if (static_cast<size_t>(size) < headerSize) + { + headerSize = static_cast<size_t>(size); // Truncate to the size of the file + full = false; + } + } + + header.resize(headerSize); + if (headerSize != 0) + { + f.read(reinterpret_cast<char*>(&header[0]), headerSize); + } + + f.close(); + + return full; + } + + + void SystemToolbox::WriteFile(const void* content, + size_t size, + const std::string& path) + { + boost::filesystem::ofstream f; + f.open(path, std::ofstream::out | std::ofstream::binary); + if (!f.good()) + { + throw OrthancException(ErrorCode_CannotWriteFile); + } + + if (size != 0) + { + f.write(reinterpret_cast<const char*>(content), size); + + if (!f.good()) + { + f.close(); + throw OrthancException(ErrorCode_FileStorageCannotWrite); + } + } + + f.close(); + } + + + void SystemToolbox::WriteFile(const std::string& content, + const std::string& path) + { + WriteFile(content.size() > 0 ? content.c_str() : NULL, + content.size(), path); + } + + + void SystemToolbox::RemoveFile(const std::string& path) + { + if (boost::filesystem::exists(path)) + { + if (IsRegularFile(path)) + { + boost::filesystem::remove(path); + } + else + { + throw OrthancException(ErrorCode_RegularFileExpected); + } + } + } + + + uint64_t SystemToolbox::GetFileSize(const std::string& path) + { + try + { + return static_cast<uint64_t>(boost::filesystem::file_size(path)); + } + catch (boost::filesystem::filesystem_error&) + { + throw OrthancException(ErrorCode_InexistentFile); + } + } + + + void SystemToolbox::MakeDirectory(const std::string& path) + { + if (boost::filesystem::exists(path)) + { + if (!boost::filesystem::is_directory(path)) + { + throw OrthancException(ErrorCode_DirectoryOverFile); + } + } + else + { + if (!boost::filesystem::create_directories(path)) + { + throw OrthancException(ErrorCode_MakeDirectory); + } + } + } + + + bool SystemToolbox::IsExistingFile(const std::string& path) + { + return boost::filesystem::exists(path); + } + + +#if defined(_WIN32) + static std::string GetPathToExecutableInternal() + { + // Yes, this is ugly, but there is no simple way to get the + // required buffer size, so we use a big constant + std::vector<char> buffer(32768); + /*int bytes =*/ GetModuleFileNameA(NULL, &buffer[0], static_cast<DWORD>(buffer.size() - 1)); + return std::string(&buffer[0]); + } + +#elif defined(__linux__) || defined(__FreeBSD_kernel__) || defined(__FreeBSD__) + static std::string GetPathToExecutableInternal() + { + // NOTE: For FreeBSD, using KERN_PROC_PATHNAME might be a better alternative + + std::vector<char> buffer(PATH_MAX + 1); + ssize_t bytes = readlink("/proc/self/exe", &buffer[0], buffer.size() - 1); + if (bytes == 0) + { + throw OrthancException(ErrorCode_PathToExecutable); + } + + return std::string(&buffer[0]); + } + +#elif defined(__APPLE__) && defined(__MACH__) + static std::string GetPathToExecutableInternal() + { + char pathbuf[PATH_MAX + 1]; + unsigned int bufsize = static_cast<int>(sizeof(pathbuf)); + + _NSGetExecutablePath( pathbuf, &bufsize); + + return std::string(pathbuf); + } + +#elif defined(__OpenBSD__) + static std::string GetPathToExecutableInternal() + { + // This is an adapted version of the patch proposed in issue #64 + // without an explicit call to "malloc()" to prevent memory leak + // https://bitbucket.org/sjodogne/orthanc/issues/64/add-openbsd-support + // https://stackoverflow.com/q/31494901/881731 + + const int mib[4] = { CTL_KERN, KERN_PROC_ARGS, getpid(), KERN_PROC_ARGV }; + + size_t len; + if (sysctl(mib, 4, NULL, &len, NULL, 0) == -1) + { + throw OrthancException(ErrorCode_PathToExecutable); + } + + std::string tmp; + tmp.resize(len); + + char** buffer = reinterpret_cast<char**>(&tmp[0]); + + if (sysctl(mib, 4, buffer, &len, NULL, 0) == -1) + { + throw OrthancException(ErrorCode_PathToExecutable); + } + else + { + return std::string(buffer[0]); + } + } + +#else +#error Support your platform here +#endif + + + std::string SystemToolbox::GetPathToExecutable() + { + boost::filesystem::path p(GetPathToExecutableInternal()); + return boost::filesystem::absolute(p).string(); + } + + + std::string SystemToolbox::GetDirectoryOfExecutable() + { + boost::filesystem::path p(GetPathToExecutableInternal()); + return boost::filesystem::absolute(p.parent_path()).string(); + } + + + void SystemToolbox::ExecuteSystemCommand(const std::string& command, + const std::vector<std::string>& arguments) + { + // Convert the arguments as a C array + std::vector<char*> args(arguments.size() + 2); + + args.front() = const_cast<char*>(command.c_str()); + + for (size_t i = 0; i < arguments.size(); i++) + { + args[i + 1] = const_cast<char*>(arguments[i].c_str()); + } + + args.back() = NULL; + + int status; + +#if defined(_WIN32) + // http://msdn.microsoft.com/en-us/library/275khfab.aspx + status = static_cast<int>(_spawnvp(_P_OVERLAY, command.c_str(), &args[0])); + +#else + int pid = fork(); + + if (pid == -1) + { + // Error in fork() +#if ORTHANC_ENABLE_LOGGING == 1 + LOG(ERROR) << "Cannot fork a child process"; +#endif + + throw OrthancException(ErrorCode_SystemCommand); + } + else if (pid == 0) + { + // Execute the system command in the child process + execvp(command.c_str(), &args[0]); + + // We should never get here + _exit(1); + } + else + { + // Wait for the system command to exit + waitpid(pid, &status, 0); + } +#endif + + if (status != 0) + { +#if ORTHANC_ENABLE_LOGGING == 1 + LOG(ERROR) << "System command failed with status code " << status; +#endif + + throw OrthancException(ErrorCode_SystemCommand); + } + } + + + int SystemToolbox::GetProcessId() + { +#if defined(_WIN32) + return static_cast<int>(_getpid()); +#else + return static_cast<int>(getpid()); +#endif + } + + + bool SystemToolbox::IsRegularFile(const std::string& path) + { + namespace fs = boost::filesystem; + + try + { + if (fs::exists(path)) + { + fs::file_status status = fs::status(path); + return (status.type() == boost::filesystem::regular_file || + status.type() == boost::filesystem::reparse_file); // Fix BitBucket issue #11 + } + } + catch (fs::filesystem_error&) + { + } + + return false; + } + + + FILE* SystemToolbox::OpenFile(const std::string& path, + FileMode mode) + { +#if defined(_WIN32) + // TODO Deal with special characters by converting to the current locale +#endif + + const char* m; + switch (mode) + { + case FileMode_ReadBinary: + m = "rb"; + break; + + case FileMode_WriteBinary: + m = "wb"; + break; + + default: + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + return fopen(path.c_str(), m); + } + + + std::string SystemToolbox::GenerateUuid() + { +#ifdef WIN32 + UUID uuid; + UuidCreate ( &uuid ); + + unsigned char * str; + UuidToStringA ( &uuid, &str ); + + std::string s( ( char* ) str ); + + RpcStringFreeA ( &str ); +#else + uuid_t uuid; + uuid_generate_random ( uuid ); + char s[37]; + uuid_unparse ( uuid, s ); +#endif + return s; + } + + + static boost::posix_time::ptime GetNow(bool utc) + { + if (utc) + { + return boost::posix_time::second_clock::universal_time(); + } + else + { + return boost::posix_time::second_clock::local_time(); + } + } + + + std::string SystemToolbox::GetNowIsoString(bool utc) + { + return boost::posix_time::to_iso_string(GetNow(utc)); + } + + + void SystemToolbox::GetNowDicom(std::string& date, + std::string& time, + bool utc) + { + boost::posix_time::ptime now = GetNow(utc); + tm tm = boost::posix_time::to_tm(now); + + char s[32]; + sprintf(s, "%04d%02d%02d", tm.tm_year + 1900, tm.tm_mon + 1, tm.tm_mday); + date.assign(s); + + // TODO milliseconds + sprintf(s, "%02d%02d%02d.%06d", tm.tm_hour, tm.tm_min, tm.tm_sec, 0); + time.assign(s); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/SystemToolbox.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,104 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(ORTHANC_SANDBOXED) +# error The macro ORTHANC_SANDBOXED must be defined +#endif + +#if ORTHANC_SANDBOXED == 1 +# error The namespace SystemToolbox cannot be used in sandboxed environments +#endif + +#include "Enumerations.h" + +#include <vector> +#include <string> +#include <stdint.h> + +namespace Orthanc +{ + namespace SystemToolbox + { + void USleep(uint64_t microSeconds); + + ServerBarrierEvent ServerBarrier(const bool& stopFlag); + + ServerBarrierEvent ServerBarrier(); + + void ReadFile(std::string& content, + const std::string& path); + + bool ReadHeader(std::string& header, + const std::string& path, + size_t headerSize); + + void WriteFile(const void* content, + size_t size, + const std::string& path); + + void WriteFile(const std::string& content, + const std::string& path); + + void RemoveFile(const std::string& path); + + uint64_t GetFileSize(const std::string& path); + + void MakeDirectory(const std::string& path); + + bool IsExistingFile(const std::string& path); + + std::string GetPathToExecutable(); + + std::string GetDirectoryOfExecutable(); + + void ExecuteSystemCommand(const std::string& command, + const std::vector<std::string>& arguments); + + int GetProcessId(); + + bool IsRegularFile(const std::string& path); + + FILE* OpenFile(const std::string& path, + FileMode mode); + + std::string GenerateUuid(); + + std::string GetNowIsoString(bool utc); + + void GetNowDicom(std::string& date, + std::string& time, + bool utc); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/TemporaryFile.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,95 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "PrecompiledHeaders.h" +#include "TemporaryFile.h" + +#include "SystemToolbox.h" +#include "Toolbox.h" + +#include <boost/filesystem.hpp> + +namespace Orthanc +{ + static std::string CreateTemporaryPath(const char* extension) + { +#if BOOST_HAS_FILESYSTEM_V3 == 1 + boost::filesystem::path tmpDir = boost::filesystem::temp_directory_path(); +#elif defined(__linux__) + boost::filesystem::path tmpDir("/tmp"); +#else +#error Support your platform here +#endif + + // We use UUID to create unique path to temporary files + std::string filename = "Orthanc-" + Orthanc::SystemToolbox::GenerateUuid(); + + if (extension != NULL) + { + filename.append(extension); + } + + tmpDir /= filename; + return tmpDir.string(); + } + + + TemporaryFile::TemporaryFile() : + path_(CreateTemporaryPath(NULL)) + { + } + + + TemporaryFile::TemporaryFile(const char* extension) : + path_(CreateTemporaryPath(extension)) + { + } + + + TemporaryFile::~TemporaryFile() + { + boost::filesystem::remove(path_); + } + + + void TemporaryFile::Write(const std::string& content) + { + SystemToolbox::WriteFile(content, path_); + } + + + void TemporaryFile::Read(std::string& content) const + { + SystemToolbox::ReadFile(content, path_); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/TemporaryFile.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,69 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(ORTHANC_SANDBOXED) +# error The macro ORTHANC_SANDBOXED must be defined +#endif + +#if ORTHANC_SANDBOXED == 1 +# error The class TemporaryFile cannot be used in sandboxed environments +#endif + +#include <string> + +namespace Orthanc +{ + class TemporaryFile + { + private: + std::string path_; + + public: + TemporaryFile(); + + TemporaryFile(const char* extension); + + ~TemporaryFile(); + + const std::string& GetPath() const + { + return path_; + } + + void Write(const std::string& content); + + void Read(std::string& content) const; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Toolbox.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,1379 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "PrecompiledHeaders.h" +#include "Toolbox.h" + +#include "OrthancException.h" +#include "Logging.h" + +#include <boost/algorithm/string/case_conv.hpp> +#include <boost/algorithm/string/replace.hpp> +#include <boost/lexical_cast.hpp> +#include <boost/regex.hpp> +#include <boost/uuid/sha1.hpp> + +#include <string> +#include <stdint.h> +#include <string.h> +#include <algorithm> +#include <ctype.h> + + +#if ORTHANC_ENABLE_MD5 == 1 +# include "../Resources/ThirdParty/md5/md5.h" +#endif + +#if ORTHANC_ENABLE_BASE64 == 1 +# include "../Resources/ThirdParty/base64/base64.h" +#endif + +#if ORTHANC_ENABLE_LOCALE == 1 +# include <boost/locale.hpp> +#endif + + +#if defined(_MSC_VER) && (_MSC_VER < 1800) +// Patch for the missing "_strtoll" symbol when compiling with Visual Studio < 2013 +extern "C" +{ + int64_t _strtoi64(const char *nptr, char **endptr, int base); + int64_t strtoll(const char *nptr, char **endptr, int base) + { + return _strtoi64(nptr, endptr, base); + } +} +#endif + + +#if defined(_WIN32) +# include <windows.h> // For ::Sleep +#endif + + +#if ORTHANC_ENABLE_PUGIXML == 1 +# include "ChunkedBuffer.h" +# include <pugixml.hpp> +#endif + + +namespace Orthanc +{ + void Toolbox::ToUpperCase(std::string& s) + { + std::transform(s.begin(), s.end(), s.begin(), toupper); + } + + + void Toolbox::ToLowerCase(std::string& s) + { + std::transform(s.begin(), s.end(), s.begin(), tolower); + } + + + void Toolbox::ToUpperCase(std::string& result, + const std::string& source) + { + result = source; + ToUpperCase(result); + } + + void Toolbox::ToLowerCase(std::string& result, + const std::string& source) + { + result = source; + ToLowerCase(result); + } + + + void Toolbox::SplitUriComponents(UriComponents& components, + const std::string& uri) + { + static const char URI_SEPARATOR = '/'; + + components.clear(); + + if (uri.size() == 0 || + uri[0] != URI_SEPARATOR) + { + throw OrthancException(ErrorCode_UriSyntax); + } + + // Count the number of slashes in the URI to make an assumption + // about the number of components in the URI + unsigned int estimatedSize = 0; + for (unsigned int i = 0; i < uri.size(); i++) + { + if (uri[i] == URI_SEPARATOR) + estimatedSize++; + } + + components.reserve(estimatedSize - 1); + + unsigned int start = 1; + unsigned int end = 1; + while (end < uri.size()) + { + // This is the loop invariant + assert(uri[start - 1] == '/' && (end >= start)); + + if (uri[end] == '/') + { + components.push_back(std::string(&uri[start], end - start)); + end++; + start = end; + } + else + { + end++; + } + } + + if (start < uri.size()) + { + components.push_back(std::string(&uri[start], end - start)); + } + + for (size_t i = 0; i < components.size(); i++) + { + if (components[i].size() == 0) + { + // Empty component, as in: "/coucou//e" + throw OrthancException(ErrorCode_UriSyntax); + } + } + } + + + void Toolbox::TruncateUri(UriComponents& target, + const UriComponents& source, + size_t fromLevel) + { + target.clear(); + + if (source.size() > fromLevel) + { + target.resize(source.size() - fromLevel); + + size_t j = 0; + for (size_t i = fromLevel; i < source.size(); i++, j++) + { + target[j] = source[i]; + } + + assert(j == target.size()); + } + } + + + + bool Toolbox::IsChildUri(const UriComponents& baseUri, + const UriComponents& testedUri) + { + if (testedUri.size() < baseUri.size()) + { + return false; + } + + for (size_t i = 0; i < baseUri.size(); i++) + { + if (baseUri[i] != testedUri[i]) + return false; + } + + return true; + } + + + std::string Toolbox::AutodetectMimeType(const std::string& path) + { + std::string contentType; + size_t lastDot = path.rfind('.'); + size_t lastSlash = path.rfind('/'); + + if (lastDot == std::string::npos || + (lastSlash != std::string::npos && lastDot < lastSlash)) + { + // No trailing dot, unable to detect the content type + } + else + { + const char* extension = &path[lastDot + 1]; + + // http://en.wikipedia.org/wiki/Mime_types + // Text types + if (!strcmp(extension, "txt")) + contentType = "text/plain"; + else if (!strcmp(extension, "html")) + contentType = "text/html"; + else if (!strcmp(extension, "xml")) + contentType = "text/xml"; + else if (!strcmp(extension, "css")) + contentType = "text/css"; + + // Application types + else if (!strcmp(extension, "js")) + contentType = "application/javascript"; + else if (!strcmp(extension, "json")) + contentType = "application/json"; + else if (!strcmp(extension, "pdf")) + contentType = "application/pdf"; + + // Images types + else if (!strcmp(extension, "jpg") || !strcmp(extension, "jpeg")) + contentType = "image/jpeg"; + else if (!strcmp(extension, "gif")) + contentType = "image/gif"; + else if (!strcmp(extension, "png")) + contentType = "image/png"; + } + + return contentType; + } + + + std::string Toolbox::FlattenUri(const UriComponents& components, + size_t fromLevel) + { + if (components.size() <= fromLevel) + { + return "/"; + } + else + { + std::string r; + + for (size_t i = fromLevel; i < components.size(); i++) + { + r += "/" + components[i]; + } + + return r; + } + } + + +#if ORTHANC_ENABLE_MD5 == 1 + static char GetHexadecimalCharacter(uint8_t value) + { + assert(value < 16); + + if (value < 10) + { + return value + '0'; + } + else + { + return (value - 10) + 'a'; + } + } + + + void Toolbox::ComputeMD5(std::string& result, + const std::string& data) + { + if (data.size() > 0) + { + ComputeMD5(result, &data[0], data.size()); + } + else + { + ComputeMD5(result, NULL, 0); + } + } + + + void Toolbox::ComputeMD5(std::string& result, + const void* data, + size_t size) + { + md5_state_s state; + md5_init(&state); + + if (size > 0) + { + md5_append(&state, + reinterpret_cast<const md5_byte_t*>(data), + static_cast<int>(size)); + } + + md5_byte_t actualHash[16]; + md5_finish(&state, actualHash); + + result.resize(32); + for (unsigned int i = 0; i < 16; i++) + { + result[2 * i] = GetHexadecimalCharacter(static_cast<uint8_t>(actualHash[i] / 16)); + result[2 * i + 1] = GetHexadecimalCharacter(static_cast<uint8_t>(actualHash[i] % 16)); + } + } +#endif + + +#if ORTHANC_ENABLE_BASE64 == 1 + void Toolbox::EncodeBase64(std::string& result, + const std::string& data) + { + result = base64_encode(data); + } + + void Toolbox::DecodeBase64(std::string& result, + const std::string& data) + { + for (size_t i = 0; i < data.length(); i++) + { + if (!isalnum(data[i]) && + data[i] != '+' && + data[i] != '/' && + data[i] != '=') + { + // This is not a valid character for a Base64 string + throw OrthancException(ErrorCode_BadFileFormat); + } + } + + result = base64_decode(data); + } + + + bool Toolbox::DecodeDataUriScheme(std::string& mime, + std::string& content, + const std::string& source) + { + boost::regex pattern("data:([^;]+);base64,([a-zA-Z0-9=+/]*)", + boost::regex::icase /* case insensitive search */); + + boost::cmatch what; + if (regex_match(source.c_str(), what, pattern)) + { + mime = what[1]; + DecodeBase64(content, what[2]); + return true; + } + else + { + return false; + } + } + + + void Toolbox::EncodeDataUriScheme(std::string& result, + const std::string& mime, + const std::string& content) + { + result = "data:" + mime + ";base64," + base64_encode(content); + } + +#endif + + +#if ORTHANC_ENABLE_LOCALE == 1 + static const char* GetBoostLocaleEncoding(const Encoding sourceEncoding) + { + switch (sourceEncoding) + { + case Encoding_Utf8: + return "UTF-8"; + + case Encoding_Ascii: + return "ASCII"; + + case Encoding_Latin1: + return "ISO-8859-1"; + break; + + case Encoding_Latin2: + return "ISO-8859-2"; + break; + + case Encoding_Latin3: + return "ISO-8859-3"; + break; + + case Encoding_Latin4: + return "ISO-8859-4"; + break; + + case Encoding_Latin5: + return "ISO-8859-9"; + break; + + case Encoding_Cyrillic: + return "ISO-8859-5"; + break; + + case Encoding_Windows1251: + return "WINDOWS-1251"; + break; + + case Encoding_Arabic: + return "ISO-8859-6"; + break; + + case Encoding_Greek: + return "ISO-8859-7"; + break; + + case Encoding_Hebrew: + return "ISO-8859-8"; + break; + + case Encoding_Japanese: + return "SHIFT-JIS"; + break; + + case Encoding_Chinese: + return "GB18030"; + break; + + case Encoding_Thai: + return "TIS620.2533-0"; + break; + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } +#endif + + +#if ORTHANC_ENABLE_LOCALE == 1 + std::string Toolbox::ConvertToUtf8(const std::string& source, + Encoding sourceEncoding) + { + if (sourceEncoding == Encoding_Utf8) + { + // Already in UTF-8: No conversion is required + return source; + } + + if (sourceEncoding == Encoding_Ascii) + { + return ConvertToAscii(source); + } + + const char* encoding = GetBoostLocaleEncoding(sourceEncoding); + + try + { + return boost::locale::conv::to_utf<char>(source, encoding); + } + catch (std::runtime_error&) + { + // Bad input string or bad encoding + return ConvertToAscii(source); + } + } +#endif + + +#if ORTHANC_ENABLE_LOCALE == 1 + std::string Toolbox::ConvertFromUtf8(const std::string& source, + Encoding targetEncoding) + { + if (targetEncoding == Encoding_Utf8) + { + // Already in UTF-8: No conversion is required + return source; + } + + if (targetEncoding == Encoding_Ascii) + { + return ConvertToAscii(source); + } + + const char* encoding = GetBoostLocaleEncoding(targetEncoding); + + try + { + return boost::locale::conv::from_utf<char>(source, encoding); + } + catch (std::runtime_error&) + { + // Bad input string or bad encoding + return ConvertToAscii(source); + } + } +#endif + + + bool Toolbox::IsAsciiString(const void* data, + size_t size) + { + const uint8_t* p = reinterpret_cast<const uint8_t*>(data); + + for (size_t i = 0; i < size; i++, p++) + { + if (*p > 127 || *p == 0 || iscntrl(*p)) + { + return false; + } + } + + return true; + } + + + bool Toolbox::IsAsciiString(const std::string& s) + { + return IsAsciiString(s.c_str(), s.size()); + } + + + std::string Toolbox::ConvertToAscii(const std::string& source) + { + std::string result; + + result.reserve(source.size() + 1); + for (size_t i = 0; i < source.size(); i++) + { + if (source[i] <= 127 && source[i] >= 0 && !iscntrl(source[i])) + { + result.push_back(source[i]); + } + } + + return result; + } + + + void Toolbox::ComputeSHA1(std::string& result, + const void* data, + size_t size) + { + boost::uuids::detail::sha1 sha1; + + if (size > 0) + { + sha1.process_bytes(data, size); + } + + unsigned int digest[5]; + + // Sanity check for the memory layout: A SHA-1 digest is 160 bits wide + assert(sizeof(unsigned int) == 4 && sizeof(digest) == (160 / 8)); + + sha1.get_digest(digest); + + result.resize(8 * 5 + 4); + sprintf(&result[0], "%08x-%08x-%08x-%08x-%08x", + digest[0], + digest[1], + digest[2], + digest[3], + digest[4]); + } + + void Toolbox::ComputeSHA1(std::string& result, + const std::string& data) + { + if (data.size() > 0) + { + ComputeSHA1(result, data.c_str(), data.size()); + } + else + { + ComputeSHA1(result, NULL, 0); + } + } + + + bool Toolbox::IsSHA1(const char* str, + size_t size) + { + if (size == 0) + { + return false; + } + + const char* start = str; + const char* end = str + size; + + // Trim the beginning of the string + while (start < end) + { + if (*start == '\0' || + isspace(*start)) + { + start++; + } + else + { + break; + } + } + + // Trim the trailing of the string + while (start < end) + { + if (*(end - 1) == '\0' || + isspace(*(end - 1))) + { + end--; + } + else + { + break; + } + } + + if (end - start != 44) + { + return false; + } + + for (unsigned int i = 0; i < 44; i++) + { + if (i == 8 || + i == 17 || + i == 26 || + i == 35) + { + if (start[i] != '-') + return false; + } + else + { + if (!isalnum(start[i])) + return false; + } + } + + return true; + } + + + bool Toolbox::IsSHA1(const std::string& s) + { + if (s.size() == 0) + { + return false; + } + else + { + return IsSHA1(s.c_str(), s.size()); + } + } + + + std::string Toolbox::StripSpaces(const std::string& source) + { + size_t first = 0; + + while (first < source.length() && + isspace(source[first])) + { + first++; + } + + if (first == source.length()) + { + // String containing only spaces + return ""; + } + + size_t last = source.length(); + while (last > first && + isspace(source[last - 1])) + { + last--; + } + + assert(first <= last); + return source.substr(first, last - first); + } + + + static char Hex2Dec(char c) + { + return ((c >= '0' && c <= '9') ? c - '0' : + ((c >= 'a' && c <= 'f') ? c - 'a' + 10 : c - 'A' + 10)); + } + + void Toolbox::UrlDecode(std::string& s) + { + // http://en.wikipedia.org/wiki/Percent-encoding + // http://www.w3schools.com/tags/ref_urlencode.asp + // http://stackoverflow.com/questions/154536/encode-decode-urls-in-c + + if (s.size() == 0) + { + return; + } + + size_t source = 0; + size_t target = 0; + + while (source < s.size()) + { + if (s[source] == '%' && + source + 2 < s.size() && + isalnum(s[source + 1]) && + isalnum(s[source + 2])) + { + s[target] = (Hex2Dec(s[source + 1]) << 4) | Hex2Dec(s[source + 2]); + source += 3; + target += 1; + } + else + { + if (s[source] == '+') + s[target] = ' '; + else + s[target] = s[source]; + + source++; + target++; + } + } + + s.resize(target); + } + + + Endianness Toolbox::DetectEndianness() + { + // http://sourceforge.net/p/predef/wiki/Endianness/ + + uint8_t buffer[4]; + + buffer[0] = 0x00; + buffer[1] = 0x01; + buffer[2] = 0x02; + buffer[3] = 0x03; + + switch (*((uint32_t *)buffer)) + { + case 0x00010203: + return Endianness_Big; + + case 0x03020100: + return Endianness_Little; + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + + std::string Toolbox::WildcardToRegularExpression(const std::string& source) + { + // TODO - Speed up this with a regular expression + + std::string result = source; + + // Escape all special characters + boost::replace_all(result, "\\", "\\\\"); + boost::replace_all(result, "^", "\\^"); + boost::replace_all(result, ".", "\\."); + boost::replace_all(result, "$", "\\$"); + boost::replace_all(result, "|", "\\|"); + boost::replace_all(result, "(", "\\("); + boost::replace_all(result, ")", "\\)"); + boost::replace_all(result, "[", "\\["); + boost::replace_all(result, "]", "\\]"); + boost::replace_all(result, "+", "\\+"); + boost::replace_all(result, "/", "\\/"); + boost::replace_all(result, "{", "\\{"); + boost::replace_all(result, "}", "\\}"); + + // Convert wildcards '*' and '?' to their regex equivalents + boost::replace_all(result, "?", "."); + boost::replace_all(result, "*", ".*"); + + return result; + } + + + void Toolbox::TokenizeString(std::vector<std::string>& result, + const std::string& value, + char separator) + { + result.clear(); + + std::string currentItem; + + for (size_t i = 0; i < value.size(); i++) + { + if (value[i] == separator) + { + result.push_back(currentItem); + currentItem.clear(); + } + else + { + currentItem.push_back(value[i]); + } + } + + result.push_back(currentItem); + } + + +#if ORTHANC_ENABLE_PUGIXML == 1 + class ChunkedBufferWriter : public pugi::xml_writer + { + private: + ChunkedBuffer buffer_; + + public: + virtual void write(const void *data, size_t size) + { + if (size > 0) + { + buffer_.AddChunk(reinterpret_cast<const char*>(data), size); + } + } + + void Flatten(std::string& s) + { + buffer_.Flatten(s); + } + }; + + + static void JsonToXmlInternal(pugi::xml_node& target, + const Json::Value& source, + const std::string& arrayElement) + { + // http://jsoncpp.sourceforge.net/value_8h_source.html#l00030 + + switch (source.type()) + { + case Json::nullValue: + { + target.append_child(pugi::node_pcdata).set_value("null"); + break; + } + + case Json::intValue: + { + std::string s = boost::lexical_cast<std::string>(source.asInt()); + target.append_child(pugi::node_pcdata).set_value(s.c_str()); + break; + } + + case Json::uintValue: + { + std::string s = boost::lexical_cast<std::string>(source.asUInt()); + target.append_child(pugi::node_pcdata).set_value(s.c_str()); + break; + } + + case Json::realValue: + { + std::string s = boost::lexical_cast<std::string>(source.asFloat()); + target.append_child(pugi::node_pcdata).set_value(s.c_str()); + break; + } + + case Json::stringValue: + { + target.append_child(pugi::node_pcdata).set_value(source.asString().c_str()); + break; + } + + case Json::booleanValue: + { + target.append_child(pugi::node_pcdata).set_value(source.asBool() ? "true" : "false"); + break; + } + + case Json::arrayValue: + { + for (Json::Value::ArrayIndex i = 0; i < source.size(); i++) + { + pugi::xml_node node = target.append_child(); + node.set_name(arrayElement.c_str()); + JsonToXmlInternal(node, source[i], arrayElement); + } + break; + } + + case Json::objectValue: + { + Json::Value::Members members = source.getMemberNames(); + + for (size_t i = 0; i < members.size(); i++) + { + pugi::xml_node node = target.append_child(); + node.set_name(members[i].c_str()); + JsonToXmlInternal(node, source[members[i]], arrayElement); + } + + break; + } + + default: + throw OrthancException(ErrorCode_NotImplemented); + } + } + + + void Toolbox::JsonToXml(std::string& target, + const Json::Value& source, + const std::string& rootElement, + const std::string& arrayElement) + { + pugi::xml_document doc; + + pugi::xml_node n = doc.append_child(rootElement.c_str()); + JsonToXmlInternal(n, source, arrayElement); + + pugi::xml_node decl = doc.prepend_child(pugi::node_declaration); + decl.append_attribute("version").set_value("1.0"); + decl.append_attribute("encoding").set_value("utf-8"); + + ChunkedBufferWriter writer; + doc.save(writer, " ", pugi::format_default, pugi::encoding_utf8); + writer.Flatten(target); + } + +#endif + + + + bool Toolbox::IsInteger(const std::string& str) + { + std::string s = StripSpaces(str); + + if (s.size() == 0) + { + return false; + } + + size_t pos = 0; + if (s[0] == '-') + { + if (s.size() == 1) + { + return false; + } + + pos = 1; + } + + while (pos < s.size()) + { + if (!isdigit(s[pos])) + { + return false; + } + + pos++; + } + + return true; + } + + + void Toolbox::CopyJsonWithoutComments(Json::Value& target, + const Json::Value& source) + { + switch (source.type()) + { + case Json::nullValue: + target = Json::nullValue; + break; + + case Json::intValue: + target = source.asInt64(); + break; + + case Json::uintValue: + target = source.asUInt64(); + break; + + case Json::realValue: + target = source.asDouble(); + break; + + case Json::stringValue: + target = source.asString(); + break; + + case Json::booleanValue: + target = source.asBool(); + break; + + case Json::arrayValue: + { + target = Json::arrayValue; + for (Json::Value::ArrayIndex i = 0; i < source.size(); i++) + { + Json::Value& item = target.append(Json::nullValue); + CopyJsonWithoutComments(item, source[i]); + } + + break; + } + + case Json::objectValue: + { + target = Json::objectValue; + Json::Value::Members members = source.getMemberNames(); + for (Json::Value::ArrayIndex i = 0; i < members.size(); i++) + { + const std::string item = members[i]; + CopyJsonWithoutComments(target[item], source[item]); + } + + break; + } + + default: + break; + } + } + + + bool Toolbox::StartsWith(const std::string& str, + const std::string& prefix) + { + if (str.size() < prefix.size()) + { + return false; + } + else + { + return str.compare(0, prefix.size(), prefix) == 0; + } + } + + + static bool IsUnreservedCharacter(char c) + { + // This function checks whether "c" is an unserved character + // wrt. an URI percent-encoding + // https://en.wikipedia.org/wiki/Percent-encoding#Percent-encoding%5Fin%5Fa%5FURI + + return ((c >= 'A' && c <= 'Z') || + (c >= 'a' && c <= 'z') || + (c >= '0' && c <= '9') || + c == '-' || + c == '_' || + c == '.' || + c == '~'); + } + + void Toolbox::UriEncode(std::string& target, + const std::string& source) + { + // Estimate the length of the percent-encoded URI + size_t length = 0; + + for (size_t i = 0; i < source.size(); i++) + { + if (IsUnreservedCharacter(source[i])) + { + length += 1; + } + else + { + // This character must be percent-encoded + length += 3; + } + } + + target.clear(); + target.reserve(length); + + for (size_t i = 0; i < source.size(); i++) + { + if (IsUnreservedCharacter(source[i])) + { + target.push_back(source[i]); + } + else + { + // This character must be percent-encoded + uint8_t byte = static_cast<uint8_t>(source[i]); + uint8_t a = byte >> 4; + uint8_t b = byte & 0x0f; + + target.push_back('%'); + target.push_back(a < 10 ? a + '0' : a - 10 + 'A'); + target.push_back(b < 10 ? b + '0' : b - 10 + 'A'); + } + } + } + + + static bool HasField(const Json::Value& json, + const std::string& key, + Json::ValueType expectedType) + { + if (json.type() != Json::objectValue || + !json.isMember(key)) + { + return false; + } + else if (json[key].type() == expectedType) + { + return true; + } + else + { + throw OrthancException(ErrorCode_BadParameterType); + } + } + + + std::string Toolbox::GetJsonStringField(const Json::Value& json, + const std::string& key, + const std::string& defaultValue) + { + if (HasField(json, key, Json::stringValue)) + { + return json[key].asString(); + } + else + { + return defaultValue; + } + } + + + bool Toolbox::GetJsonBooleanField(const ::Json::Value& json, + const std::string& key, + bool defaultValue) + { + if (HasField(json, key, Json::booleanValue)) + { + return json[key].asBool(); + } + else + { + return defaultValue; + } + } + + + int Toolbox::GetJsonIntegerField(const ::Json::Value& json, + const std::string& key, + int defaultValue) + { + if (HasField(json, key, Json::intValue)) + { + return json[key].asInt(); + } + else + { + return defaultValue; + } + } + + + unsigned int Toolbox::GetJsonUnsignedIntegerField(const ::Json::Value& json, + const std::string& key, + unsigned int defaultValue) + { + int v = GetJsonIntegerField(json, key, defaultValue); + + if (v < 0) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + else + { + return static_cast<unsigned int>(v); + } + } + + + bool Toolbox::IsUuid(const std::string& str) + { + if (str.size() != 36) + { + return false; + } + + for (size_t i = 0; i < str.length(); i++) + { + if (i == 8 || i == 13 || i == 18 || i == 23) + { + if (str[i] != '-') + return false; + } + else + { + if (!isalnum(str[i])) + return false; + } + } + + return true; + } + + + bool Toolbox::StartsWithUuid(const std::string& str) + { + if (str.size() < 36) + { + return false; + } + + if (str.size() == 36) + { + return IsUuid(str); + } + + assert(str.size() > 36); + if (!isspace(str[36])) + { + return false; + } + + return IsUuid(str.substr(0, 36)); + } + + +#if ORTHANC_ENABLE_LOCALE == 1 + static std::auto_ptr<std::locale> globalLocale_; + + static bool SetGlobalLocale(const char* locale) + { + globalLocale_.reset(NULL); + + try + { + if (locale == NULL) + { + LOG(WARNING) << "Falling back to system-wide default locale"; + globalLocale_.reset(new std::locale()); + } + else + { + LOG(INFO) << "Using locale: \"" << locale << "\" for case-insensitive comparison of strings"; + globalLocale_.reset(new std::locale(locale)); + } + } + catch (std::runtime_error&) + { + } + + return (globalLocale_.get() != NULL); + } + + void Toolbox::InitializeGlobalLocale(const char* locale) + { + // Make Orthanc use English, United States locale + // Linux: use "en_US.UTF-8" + // Windows: use "" + // Wine: use NULL + +#if defined(__MINGW32__) + // Visibly, there is no support of locales in MinGW yet + // http://mingw.5.n7.nabble.com/How-to-use-std-locale-global-with-MinGW-correct-td33048.html + static const char* DEFAULT_LOCALE = NULL; +#elif defined(_WIN32) + // For Windows: use default locale (using "en_US" does not work) + static const char* DEFAULT_LOCALE = ""; +#else + // For Linux & cie + static const char* DEFAULT_LOCALE = "en_US.UTF-8"; +#endif + + bool ok; + + if (locale == NULL) + { + ok = SetGlobalLocale(DEFAULT_LOCALE); + +#if defined(__MINGW32__) + LOG(WARNING) << "This is a MinGW build, case-insensitive comparison of " + << "strings with accents will not work outside of Wine"; +#endif + } + else + { + ok = SetGlobalLocale(locale); + } + + if (!ok && + !SetGlobalLocale(NULL)) + { + LOG(ERROR) << "Cannot initialize global locale"; + throw OrthancException(ErrorCode_InternalError); + } + + } + + + void Toolbox::FinalizeGlobalLocale() + { + globalLocale_.reset(); + } + + + std::string Toolbox::ToUpperCaseWithAccents(const std::string& source) + { + if (globalLocale_.get() == NULL) + { + LOG(ERROR) << "No global locale was set, call Toolbox::InitializeGlobalLocale()"; + throw OrthancException(ErrorCode_BadSequenceOfCalls); + } + + /** + * A few notes about locales: + * + * (1) We don't use "case folding": + * http://www.boost.org/doc/libs/1_64_0/libs/locale/doc/html/conversions.html + * + * Characters are made uppercase one by one. This is because, in + * static builds, we are using iconv, which is visibly not + * supported correctly (TODO: Understand why). Case folding seems + * to be working correctly if using the default backend under + * Linux (ICU or POSIX?). If one wishes to use case folding, one + * would use: + * + * boost::locale::generator gen; + * std::locale::global(gen(DEFAULT_LOCALE)); + * return boost::locale::to_upper(source); + * + * (2) The function "boost::algorithm::to_upper_copy" does not + * make use of the "std::locale::global()". We therefore create a + * global variable "globalLocale_". + * + * (3) The variant of "boost::algorithm::to_upper_copy()" that + * uses std::string does not work properly. We need to apply it + * one wide strings (std::wstring). This explains the two calls to + * "utf_to_utf" in order to convert to/from std::wstring. + **/ + + std::wstring w = boost::locale::conv::utf_to_utf<wchar_t>(source); + w = boost::algorithm::to_upper_copy<std::wstring>(w, *globalLocale_); + return boost::locale::conv::utf_to_utf<char>(w); + } +#endif +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/Toolbox.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,218 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "Enumerations.h" + +#include <stdint.h> +#include <vector> +#include <string> +#include <json/json.h> + + +#if !defined(ORTHANC_ENABLE_BASE64) +# error The macro ORTHANC_ENABLE_BASE64 must be defined +#endif + +#if !defined(ORTHANC_ENABLE_LOCALE) +# error The macro ORTHANC_ENABLE_LOCALE must be defined +#endif + +#if !defined(ORTHANC_ENABLE_MD5) +# error The macro ORTHANC_ENABLE_MD5 must be defined +#endif + +#if !defined(ORTHANC_ENABLE_PUGIXML) +# error The macro ORTHANC_ENABLE_PUGIXML must be defined +#endif + + +/** + * NOTE: GUID vs. UUID + * The simple answer is: no difference, they are the same thing. Treat + * them as a 16 byte (128 bits) value that is used as a unique + * value. In Microsoft-speak they are called GUIDs, but call them + * UUIDs when not using Microsoft-speak. + * http://stackoverflow.com/questions/246930/is-there-any-difference-between-a-guid-and-a-uuid + **/ + + + +namespace Orthanc +{ + typedef std::vector<std::string> UriComponents; + + class NullType + { + }; + + namespace Toolbox + { + void ToUpperCase(std::string& s); // Inplace version + + void ToLowerCase(std::string& s); // Inplace version + + void ToUpperCase(std::string& result, + const std::string& source); + + void ToLowerCase(std::string& result, + const std::string& source); + + void SplitUriComponents(UriComponents& components, + const std::string& uri); + + void TruncateUri(UriComponents& target, + const UriComponents& source, + size_t fromLevel); + + bool IsChildUri(const UriComponents& baseUri, + const UriComponents& testedUri); + + std::string AutodetectMimeType(const std::string& path); + + std::string FlattenUri(const UriComponents& components, + size_t fromLevel = 0); + +#if ORTHANC_ENABLE_MD5 == 1 + void ComputeMD5(std::string& result, + const std::string& data); + + void ComputeMD5(std::string& result, + const void* data, + size_t size); +#endif + + void ComputeSHA1(std::string& result, + const std::string& data); + + void ComputeSHA1(std::string& result, + const void* data, + size_t size); + + bool IsSHA1(const char* str, + size_t size); + + bool IsSHA1(const std::string& s); + +#if ORTHANC_ENABLE_BASE64 == 1 + void DecodeBase64(std::string& result, + const std::string& data); + + void EncodeBase64(std::string& result, + const std::string& data); + + bool DecodeDataUriScheme(std::string& mime, + std::string& content, + const std::string& source); + + void EncodeDataUriScheme(std::string& result, + const std::string& mime, + const std::string& content); +#endif + +#if ORTHANC_ENABLE_LOCALE == 1 + std::string ConvertToUtf8(const std::string& source, + Encoding sourceEncoding); + + std::string ConvertFromUtf8(const std::string& source, + Encoding targetEncoding); +#endif + + bool IsAsciiString(const void* data, + size_t size); + + bool IsAsciiString(const std::string& s); + + std::string ConvertToAscii(const std::string& source); + + std::string StripSpaces(const std::string& source); + + // In-place percent-decoding for URL + void UrlDecode(std::string& s); + + Endianness DetectEndianness(); + + std::string WildcardToRegularExpression(const std::string& s); + + void TokenizeString(std::vector<std::string>& result, + const std::string& source, + char separator); + +#if ORTHANC_ENABLE_PUGIXML == 1 + void JsonToXml(std::string& target, + const Json::Value& source, + const std::string& rootElement = "root", + const std::string& arrayElement = "item"); +#endif + + bool IsInteger(const std::string& str); + + void CopyJsonWithoutComments(Json::Value& target, + const Json::Value& source); + + bool StartsWith(const std::string& str, + const std::string& prefix); + + void UriEncode(std::string& target, + const std::string& source); + + std::string GetJsonStringField(const ::Json::Value& json, + const std::string& key, + const std::string& defaultValue); + + bool GetJsonBooleanField(const ::Json::Value& json, + const std::string& key, + bool defaultValue); + + int GetJsonIntegerField(const ::Json::Value& json, + const std::string& key, + int defaultValue); + + unsigned int GetJsonUnsignedIntegerField(const ::Json::Value& json, + const std::string& key, + unsigned int defaultValue); + + bool IsUuid(const std::string& str); + + bool StartsWithUuid(const std::string& str); + +#if ORTHANC_ENABLE_LOCALE == 1 + void InitializeGlobalLocale(const char* locale); + + void FinalizeGlobalLocale(); + + std::string ToUpperCaseWithAccents(const std::string& source); +#endif + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/WebServiceParameters.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,273 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "PrecompiledHeaders.h" +#include "WebServiceParameters.h" + +#include "../Core/Logging.h" +#include "../Core/OrthancException.h" + +#if ORTHANC_SANDBOXED == 0 +# include "../Core/SystemToolbox.h" +#endif + +#include <cassert> + +namespace Orthanc +{ + WebServiceParameters::WebServiceParameters() : + advancedFormat_(false), + url_("http://127.0.0.1:8042/"), + pkcs11Enabled_(false) + { + } + + + void WebServiceParameters::ClearClientCertificate() + { + certificateFile_.clear(); + certificateKeyFile_.clear(); + certificateKeyPassword_.clear(); + } + + +#if ORTHANC_SANDBOXED == 0 + void WebServiceParameters::SetClientCertificate(const std::string& certificateFile, + const std::string& certificateKeyFile, + const std::string& certificateKeyPassword) + { + if (certificateFile.empty()) + { + throw OrthancException(ErrorCode_ParameterOutOfRange); + } + + if (!SystemToolbox::IsRegularFile(certificateFile)) + { + LOG(ERROR) << "Cannot open certificate file: " << certificateFile; + throw OrthancException(ErrorCode_InexistentFile); + } + + if (!certificateKeyFile.empty() && + !SystemToolbox::IsRegularFile(certificateKeyFile)) + { + LOG(ERROR) << "Cannot open key file: " << certificateKeyFile; + throw OrthancException(ErrorCode_InexistentFile); + } + + advancedFormat_ = true; + certificateFile_ = certificateFile; + certificateKeyFile_ = certificateKeyFile; + certificateKeyPassword_ = certificateKeyPassword; + } +#endif + + + static void AddTrailingSlash(std::string& url) + { + if (url.size() != 0 && + url[url.size() - 1] != '/') + { + url += '/'; + } + } + + + void WebServiceParameters::FromJsonArray(const Json::Value& peer) + { + assert(peer.isArray()); + + advancedFormat_ = false; + pkcs11Enabled_ = false; + + if (peer.size() != 1 && + peer.size() != 3) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + + std::string url = peer.get(0u, "").asString(); + if (url.empty()) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + + AddTrailingSlash(url); + SetUrl(url); + + if (peer.size() == 1) + { + SetUsername(""); + SetPassword(""); + } + else if (peer.size() == 3) + { + SetUsername(peer.get(1u, "").asString()); + SetPassword(peer.get(2u, "").asString()); + } + else + { + throw OrthancException(ErrorCode_BadFileFormat); + } + } + + + static std::string GetStringMember(const Json::Value& peer, + const std::string& key, + const std::string& defaultValue) + { + if (!peer.isMember(key)) + { + return defaultValue; + } + else if (peer[key].type() != Json::stringValue) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + else + { + return peer[key].asString(); + } + } + + + void WebServiceParameters::FromJsonObject(const Json::Value& peer) + { + assert(peer.isObject()); + advancedFormat_ = true; + + std::string url = GetStringMember(peer, "Url", ""); + if (url.empty()) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + + AddTrailingSlash(url); + SetUrl(url); + + SetUsername(GetStringMember(peer, "Username", "")); + SetPassword(GetStringMember(peer, "Password", "")); + +#if ORTHANC_SANDBOXED == 0 + if (peer.isMember("CertificateFile")) + { + SetClientCertificate(GetStringMember(peer, "CertificateFile", ""), + GetStringMember(peer, "CertificateKeyFile", ""), + GetStringMember(peer, "CertificateKeyPassword", "")); + } +#endif + + if (peer.isMember("Pkcs11")) + { + if (peer["Pkcs11"].type() == Json::booleanValue) + { + pkcs11Enabled_ = peer["Pkcs11"].asBool(); + } + else + { + throw OrthancException(ErrorCode_BadFileFormat); + } + } + } + + + void WebServiceParameters::FromJson(const Json::Value& peer) + { + try + { + if (peer.isArray()) + { + FromJsonArray(peer); + } + else if (peer.isObject()) + { + FromJsonObject(peer); + } + else + { + throw OrthancException(ErrorCode_BadFileFormat); + } + } + catch (OrthancException&) + { + throw; + } + catch (...) + { + throw OrthancException(ErrorCode_BadFileFormat); + } + } + + + void WebServiceParameters::ToJson(Json::Value& value) const + { + if (advancedFormat_) + { + value = Json::objectValue; + value["Url"] = url_; + + if (!username_.empty() || + !password_.empty()) + { + value["Username"] = username_; + value["Password"] = password_; + } + + if (!certificateFile_.empty()) + { + value["CertificateFile"] = certificateFile_; + } + + if (!certificateKeyFile_.empty()) + { + value["CertificateKeyFile"] = certificateKeyFile_; + } + + if (!certificateKeyPassword_.empty()) + { + value["CertificateKeyPassword"] = certificateKeyPassword_; + } + } + else + { + value = Json::arrayValue; + value.append(url_); + + if (!username_.empty() || + !password_.empty()) + { + value.append(username_); + value.append(password_); + } + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Core/WebServiceParameters.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,131 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(ORTHANC_SANDBOXED) +# error The macro ORTHANC_SANDBOXED must be defined +#endif + +#include <string> +#include <json/json.h> + +namespace Orthanc +{ + class WebServiceParameters + { + private: + bool advancedFormat_; + std::string url_; + std::string username_; + std::string password_; + std::string certificateFile_; + std::string certificateKeyFile_; + std::string certificateKeyPassword_; + bool pkcs11Enabled_; + + void FromJsonArray(const Json::Value& peer); + + void FromJsonObject(const Json::Value& peer); + + public: + WebServiceParameters(); + + const std::string& GetUrl() const + { + return url_; + } + + void SetUrl(const std::string& url) + { + url_ = url; + } + + const std::string& GetUsername() const + { + return username_; + } + + void SetUsername(const std::string& username) + { + username_ = username; + } + + const std::string& GetPassword() const + { + return password_; + } + + void SetPassword(const std::string& password) + { + password_ = password; + } + + void ClearClientCertificate(); + +#if ORTHANC_SANDBOXED == 0 + void SetClientCertificate(const std::string& certificateFile, + const std::string& certificateKeyFile, + const std::string& certificateKeyPassword); +#endif + + const std::string& GetCertificateFile() const + { + return certificateFile_; + } + + const std::string& GetCertificateKeyFile() const + { + return certificateKeyFile_; + } + + const std::string& GetCertificateKeyPassword() const + { + return certificateKeyPassword_; + } + + void SetPkcs11Enabled(bool pkcs11Enabled) + { + pkcs11Enabled_ = pkcs11Enabled; + } + + bool IsPkcs11Enabled() const + { + return pkcs11Enabled_; + } + + void FromJson(const Json::Value& peer); + + void ToJson(Json::Value& value) const; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/NEWS Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,942 @@ +Pending changes in the mainline +=============================== + +REST API +-------- + +* "/system" URI returns the version of the Orthanc REST API +* "/tools/now" returns the current UTC (universal) time +* "/tools/now-local" returns the curent local time. + This was the behavior of "/tools/now" until release 1.3.1. +* Added "?expand" GET argument to "/peers" and "/modalities" routes +* New URI: "/tools/create-media-extended" to generate a DICOMDIR + archive from several resources, including additional type-3 tags + +Lua +--- + +* New CMake option: "-DENABLE_LUA_MODULES=ON" to enable support for + loading external Lua modules if the Lua engine is statically linked + +Plugins +------- + +* New error code: DatabaseUnavailable + +Maintenance +----------- + +* Orthanc now uses UTC (universal time) instead of local time in its database +* Fix to allow creating DICOM instances with empty Specific Character Set (0008,0005) +* Upgrade to curl 7.57.0 for static and Windows builds +* Support of Linux Standard Base +* Static linking against libuuid (from e2fsprogs) +* Fix static build on CentOS 6 +* Upgrade to JsonCpp 1.8.4 for static builds +* Possibility of using JsonCpp 0.10.6 if the compiler does not support C++11 + with the "-DUSE_LEGACY_JSONCPP=ON" CMake option + + +Version 1.3.1 (2017-11-29) +========================== + +General +------- + +* Built-in decoding of palette images + +REST API +-------- + +* New URI: "/instances/.../frames/.../raw.gz" to compress raw frames using gzip +* New argument "ignore-length" to force the inclusion of too long tags in JSON +* New argument "/.../media?extended" to include additional type-3 tags in DICOMDIR + +Plugins +------- + +* New pixel formats exposed in SDK: BGRA32, Float32, Grayscale32, RGB48 + +Maintenance +----------- + +* Creation of ./Resources/CMake/OrthancFramework*.cmake to reuse the Orthanc + C++ framework in other projects +* New security-related options: "DicomAlwaysAllowEcho" +* Use "GBK" (frequently used in China) as an alias for "GB18030" +* Experimental support of actively maintained Civetweb to replace Mongoose 3.8 +* Fix issue 31 for good (create new modality types for Philips ADW, GE Xeleris, GE AWServer) +* Fix issue 64 (OpenBSD support) +* Fix static compilation of DCMTK 3.6.2 on Fedora +* Upgrade to Boost 1.65.1 in static builds +* Upgrade to SQLite amalgamation 3.21.0 in static builds + + +Version 1.3.0 (2017-07-19) +========================== + +General +------- + +* Orthanc now anonymizes according to Basic Profile of PS 3.15-2017c Table E.1-1 +* In the "DicomModalities" configuration: + - Manufacturer type MedInria is now obsolete + - Manufacturer types AgfaImpax and SyngoVia are obsolete too + (use GenericNoWildcardInDates instead) + - Obsolete manufacturers are still accepted but might disappear in the future + - Added new manufacturer: GenericNoUniversalWildcard to replace all '*' by '' in + outgoing C-Find requests +* New security-related options: "DicomAlwaysAllowStore" and "DicomCheckModalityHost" + +REST API +-------- + +* Argument "Since" in URI "/tools/find" (related to issue 53) +* Argument "DicomVersion" in URIs "/{...}/{...}/anonymization" + +Plugins +------- + +* New function: "OrthancPluginRegisterIncomingHttpRequestFilter2()" + +Lua +--- + +* Added HTTP headers support for Lua HttpPost/HttpGet/HttpPut/HttpDelete + +Orthanc Explorer +---------------- + +* Query/retrieve: Added button for "DR" modality + +Maintenance +----------- + +* Ability to retrieve raw frames encoded as unsigned 32-bits integers +* Fix issue 29 (more consistent handling of the "--upgrade" argument) +* Fix issue 31 (create new modality types for Philips ADW, GE Xeleris, GE AWServer) +* Fix issue 35 (AET name is not transferred to Orthanc using DCMTK 3.6.0) +* Fix issue 44 (bad interpretation of photometric interpretation MONOCHROME1) +* Fix issue 45 (crash when providing a folder to "--config" command-line option) +* Fix issue 46 (PHI remaining after anonymization) +* Fix issue 49 (worklists: accentuated characters are removed from C-Find responses) +* Fix issue 52 (DICOM level security association problems) +* Fix issue 55 (modification/anonymization of tags that might break the database + model now requires the "Force" parameter to be set to "true" in the query) +* Fix issue 56 (case-insensitive matching over accents) +* Fix Debian #865606 (orthanc FTBFS with libdcmtk-dev 3.6.1~20170228-2) +* Fix XSS inside DICOM in Orthanc Explorer (as reported by Victor Pasnkel, Morphus Labs) +* Upgrade to DCMTK 3.6.2 in static builds (released on 2017-07-17) +* Upgrade to Boost 1.64.0 in static builds +* New advanced "Locale" configuration option +* Removed configuration option "USE_DCMTK_361_PRIVATE_DIC" + + +Version 1.2.0 (2016/12/13) +========================== + +General +------- + +* Handling of private tags/creators in the "Dictionary" configuration option +* New configuration options: "LoadPrivateDictionary", "DicomScuTimeout" and "DicomScpTimeout" +* New metadata automatically computed at the instance level: "TransferSyntax" and "SopClassUid" + +REST API +-------- + +* "/tools/invalidate-tags" to invalidate the JSON summary of all the DICOM files + (useful if private tags are registered, or if changing the default encoding) +* "Permissive" flag for URI "/modalities/{...}/store" to ignore C-STORE transfer errors +* "Asynchronous" flag for URIs "/modalities/{...}/store" and "/peers/{...}/store" + to avoid waiting for the completion of image transfers +* Possibility to DELETE "dicom-as-json" attachments to reconstruct the JSON summaries + (useful if "Dictionary" has changed) +* "Keep" option for modifications to keep original DICOM identifiers (advanced feature) +* "/tools/default-encoding" to get or temporarily change the default encoding +* "/{resource}/{id}/reconstruct" to reconstruct the main DICOM tags, the JSON summary and + the metadata of a resource (useful to compute new metadata, or if using "Keep" above) + +Plugins +------- + +* New function: "OrthancPluginRegisterPrivateDictionaryTag()" to register private tags +* More control over client cache in the ServeFolders plugin +* New C++ help wrappers in "Plugins/Samples/Common/" to read DICOM datasets from REST API +* New data structure: "OrthancPluginFindMatcher" to match DICOM against C-FIND queries + +Maintenance +----------- + +* Fix handling of encodings in C-FIND requests (including for worklists) +* Use of DCMTK 3.6.1 dictionary of private tags in standalone builds +* Avoid hard crash if not enough memory (handling of std::bad_alloc) +* Improved robustness of Orthanc Explorer wrt. query/retrieve (maybe fix issue 24) +* Fix serious performance issue with C-FIND +* Fix extraction of the symbolic name of the private tags +* Performance warning if runtime debug assertions are turned on +* Improved robustness against files with no PatientID +* Upgrade to curl 7.50.3 for static and Windows builds +* Content-Type for JSON documents is now "application/json; charset=utf-8" +* Ignore "Group Length" tags in C-FIND queries +* Fix handling of worklist SCP with ReferencedStudySequence and ReferencedPatientSequence +* Fix handling of Move Originator AET and ID in C-MOVE SCP +* Fix vulnerability ZSL-2016-5379 "Unquoted Service Path Privilege Escalation" in the + Windows service +* Fix vulnerability ZSL-2016-5380 "Remote Memory Corruption Vulnerability" in DCMTK 3.6.0 + + +Version 1.1.0 (2016/06/27) +========================== + +General +------- + +* HTTPS client certificates can be associated with Orthanc peers to enhance security over Internet +* Possibility to use PKCS#11 authentication for hardware security modules with Orthanc peers +* New command-line option "--logfile" to output the Orthanc log to the given file +* Support of SIGHUP signal (restart Orthanc only if the configuration files have changed) + +REST API +-------- + +* New URI: "/instances/.../frames/.../raw" to access the raw frames (bypass image decoding) +* New URI "/modalities/.../move" to issue C-MOVE SCU requests +* "MoveOriginatorID" can be specified for "/modalities/.../store" + +Dicom protocol +-------------- + +* Support of optional tags for counting resources in C-FIND: + 0008-0061, 0008-0062, 0020-1200, 0020-1202, 0020-1204, 0020-1206, 0020-1208, 0020-1209 +* Support of Move Originator Message ID (0000,1031) in C-STORE responses driven by C-MOVE + +Plugins +------- + +* Speedup in plugins by removing unnecessary locks +* New callback to filter incoming HTTP requests: OrthancPluginRegisterIncomingHttpRequestFilter() +* New callback to handle non-worklists C-FIND requests: OrthancPluginRegisterFindCallback() +* New callback to handle C-MOVE requests: OrthancPluginRegisterMoveCallback() +* New function: "OrthancPluginHttpClient()" to do HTTP requests with full control +* New function: "OrthancPluginGenerateUuid()" to generate a UUID +* More than one custom image decoder can be installed (e.g. to handle different transfer syntaxes) + +Lua +--- + +* Possibility to dynamically fix outgoing C-FIND requests using "OutgoingFindRequestFilter()" +* Access to the HTTP headers in the "IncomingHttpRequestFilter()" callback + +Image decoding +-------------- + +* Huge speedup if decoding the family of JPEG transfer syntaxes +* Refactoring leading to speedups with custom image decoders (including Web viewer plugin) +* Support decoding of RLE Lossless transfer syntax +* Support of signed 16bpp images in ParsedDicomFile + +Maintenance +----------- + +* New logo of Orthanc +* Fix issue 11 (is_regular_file() fails for FILE_ATTRIBUTE_REPARSE_POINT) +* Fix issue 16 ("Limit" parameter error in REST API /tools/find method) +* Fix of Debian bug #818512 ("FTBFS: Please install libdcmtk*-dev") +* Fix of Debian bug #823139 ("orthanc: Please provide RecoverCompressedFile.cpp") +* Replaced "localhost" by "127.0.0.1", as it might impact performance on Windows +* Compatibility with CMake >= 3.5.0 +* Possibility to use forthcoming DCMTK 3.6.1 in static builds (instead of 3.6.0) +* Upgrade to Boost 1.60.0 for static builds +* Use of HTTP status 403 Forbidden (instead of 401) if access to a REST resource is disallowed +* Option "HttpsVerifyPeers" can be used to connect against self-signed HTTPS certificates +* New configuration option "AllowFindSopClassesInStudy" +* Macro "__linux" (now obsolete) replaced by macro "__linux__" (maybe solves Debian bug #821011) +* Modification of instances can now replace PixelData (resp. EncapsulatedDocument) with + provided a PNG/JPEG image (resp. PDF file) if it is encoded using Data URI Scheme +* Dropped support of Google Log + + +Version 1.0.0 (2015/12/15) +========================== + +* Lua: "IncomingFindRequestFilter()" to apply filters to incoming C-FIND requests +* New function in plugin SDK: "OrthancPluginSendMultipartItem2()" +* Fix of DICOMDIR generation with DCMTK 3.6.1, support of encodings +* Fix range search if the lower or upper limit is absent +* Fix modality worklists lookups if tags with UN (unknown) VR are present +* Warn about badly formatted modality/peer definitions in configuration file at startup + + +Version 0.9.6 (2015/12/08) +========================== + +* Promiscuous mode (accept unknown SOP class UID) is now turned off by default +* Fix serialization of DICOM buffers that might contain garbage trailing +* Fix modality worklists server if some fields are null +* More tolerant "/series/.../ordered-slices" with broken series +* Improved logging information if upgrade fails +* Fix formatting of multipart HTTP answers (bis) + + +Version 0.9.5 (2015/12/02) +========================== + +Major +----- + +* Experimental support of DICOM C-FIND SCP for modality worklists through plugins +* Support of DICOM C-FIND SCU for modality worklists ("/modalities/{dicom}/find-worklist") + +REST API +-------- + +* New URIs: + - "/series/.../ordered-slices" to order the slices of a 2D+t or 3D series + - "/tools/shutdown" to stop Orthanc from the REST API + - ".../compress", ".../uncompress" and ".../is-compressed" for attachments + - "/tools/create-archive" to create ZIP from a set of resources + - "/tools/create-media" to create ZIP+DICOMDIR from a set of resources + - "/instances/.../header" to get the meta information (header) of the DICOM instance +* "/tools/create-dicom": + - Support of binary tags encoded using data URI scheme + - Support of hierarchical structures (creation of sequences) + - Create tags with unknown VR +* "/modify" can insert/modify sequences +* ".../preview" and ".../image-uint8" can return JPEG images if the HTTP Accept Header asks so +* "Origin" metadata for the instances + +Minor +----- + +* New configuration options: + - "UnknownSopClassAccepted" to disable promiscuous mode (accept unknown SOP class UID) + - New configuration option: "Dictionary" to declare custom DICOM tags +* Add ".dcm" suffix to files in ZIP archives (cf. URI ".../archive") +* MIME content type can be associated to custom attachments (cf. "UserContentType") + +Plugins +------- + +* New functions: + - "OrthancPluginRegisterDecodeImageCallback()" to replace the built-in image decoder + - "OrthancPluginDicomInstanceToJson()" to convert DICOM to JSON + - "OrthancPluginDicomBufferToJson()" to convert DICOM to JSON + - "OrthancPluginRegisterErrorCode()" to declare custom error codes + - "OrthancPluginRegisterDictionaryTag()" to declare custom DICOM tags + - "OrthancPluginLookupDictionary()" to get information about some DICOM tag + - "OrthancPluginRestApiGet2()" to provide HTTP headers when calling Orthanc API + - "OrthancPluginGetInstanceOrigin()" to know through which mechanism an instance was received + - "OrthancPluginCreateImage()" and "OrthancPluginCreateImageAccessor()" to create images + - "OrthancPluginDecodeDicomImage()" to decode DICOM images + - "OrthancPluginComputeMd5()" and "OrthancPluginComputeSha1()" to compute MD5/SHA-1 hash +* New events in change callbacks: + - "OrthancStarted" + - "OrthancStopped" + - "UpdatedAttachment" + - "UpdatedMetadata" +* "/system" URI gives information about the plugins used for storage area and DB back-end +* Plugin callbacks must now return explicit "OrthancPluginErrorCode" (instead of integers) + +Lua +--- + +* Optional argument "keepStrings" in "DumpJson()" + +Maintenance +----------- + +* Full indexation of the patient/study tags to speed up searches and C-FIND +* Many refactorings, notably of the searching features and of the image decoding +* C-MOVE SCP for studies using AccessionNumber tag +* Fix issue 4 (C-STORE Association not renegotiated on Specific-to-specific transfer syntax change) +* Fix formatting of multipart HTTP answers +* "--logdir" flag creates a single log file instead of 3 separate files for errors/warnings/infos +* "--errors" flag lists the error codes that could be returned by Orthanc +* Under Windows, the exit status of Orthanc corresponds to the encountered error code +* New "AgfaImpax", "EFilm2" and "Vitrea" modality manufacturers +* C-FIND SCP will return tags with sequence value representation +* Upgrade to Boost 1.59.0 for static builds + + +Version 0.9.4 (2015/09/16) +========================== + +* Preview of PDF files encapsulated in DICOM from Orthanc Explorer +* Creation of DICOM files with encapsulated PDF through "/tools/create-dicom" +* "limit" and "since" arguments while retrieving DICOM resources in the REST API +* Support of "deflate" and "gzip" content-types in HTTP requests +* Options to validate peers against CA certificates in HTTPS requests +* New configuration option: "HttpTimeout" to set the default timeout for HTTP requests + +Lua +--- + +* More information about the origin request in the "OnStoredInstance()" and + "ReceivedInstanceFilter()" callbacks. WARNING: This can result in + incompatibilities wrt. previous versions of Orthanc. +* New function "GetOrthancConfiguration()" to get the Orthanc configuration + +Plugins +------- + +* New functions to compress/uncompress images using PNG and JPEG +* New functions to issue HTTP requests from plugins +* New function "OrthancPluginBufferCompression()" to (un)compress memory buffers +* New function "OrthancPluginReadFile()" to read files from the filesystem +* New function "OrthancPluginWriteFile()" to write files to the filesystem +* New function "OrthancPluginGetErrorDescription()" to convert error codes to strings +* New function "OrthancPluginSendHttpStatus()" to send HTTP status with a body +* New function "OrthancPluginRegisterRestCallbackNoLock()" for high-performance plugins +* Plugins have access to explicit error codes +* Improvements to the sample "ServeFolders" plugin +* Primitives to upgrade the database version in plugins + +Maintenance +----------- + +* Many code refactorings +* Improved error codes (no more custom descriptions in exceptions) +* If error while calling the REST API, the answer body contains description of the error + (this feature can be disabled with the "HttpDescribeErrors" option) +* Upgrade to curl 7.44.0 for static and Windows builds +* Upgrade to libcurl 1.0.2d for static and Windows builds +* Depends on libjpeg 9a +* Bypass zlib uncompression if "StorageCompression" is enabled and HTTP client supports deflate + + +Version 0.9.3 (2015/08/07) +========================== + +* C-Echo testing can be triggered from Orthanc Explorer (in the query/retrieve page) +* Removal of the dependency upon Google Log, Orthanc now uses its internal logger + (use -DENABLE_GOOGLE_LOG=ON to re-enable Google Log) +* Upgrade to JsonCpp 0.10.5 for static and Windows builds + + +Version 0.9.2 (2015/08/02) +========================== + +* Upgrade to Boost 1.58.0 for static and Windows builds +* Source code repository moved from Google Code to BitBucket +* Inject version information into Windows binaries +* Fix access to binary data in HTTP/REST requests by Lua scripts +* Fix potential deadlock in the callbacks of plugins + + +Version 0.9.1 (2015/07/02) +========================== + +General +------- + +* The configuration can be splitted into several files stored inside the same folder +* Custom setting of the local AET during C-STORE SCU (both in Lua and in the REST API) +* Many code refactorings + +Lua +--- + +* Access to the REST API of Orthanc (RestApiGet, RestApiPost, RestApiPut, RestApiDelete) +* Functions to convert between Lua values and JSON strings: "ParseJson" and "DumpJson" +* New events: "OnStablePatient", "OnStableStudy", "OnStableSeries", "Initialize", "Finalize" + +Plugins +------- + +* Plugins can retrieve the configuration file directly as a JSON string +* Plugins can send answers as multipart messages + +Fixes +----- + +* Fix compatibility issues for C-FIND SCU to Siemens Syngo.Via modalities SCP +* Fix issue 15 (Lua scripts making HTTP requests) +* Fix issue 35 (Characters in PatientID string are not protected for C-FIND) +* Fix issue 37 (Hyphens trigger range query even if datatype does not support ranges) + + +Version 0.9.0 (2015/06/03) +========================== + +Major +----- + +* DICOM Query/Retrieve available from Orthanc Explorer +* C-MOVE SCU and C-FIND SCU are accessible through the REST API +* "?expand" flag for URIs "/patients", "/studies" and "/series" +* "/tools/find" URI to search for DICOM resources from REST +* Support of FreeBSD +* The "Orthanc Client" SDK is now a separate project + +Minor +----- + +* Speed-up in Orthanc Explorer for large amount of images +* Speed-up of the C-FIND SCP server of Orthanc +* Allow replacing PatientID/StudyInstanceUID/SeriesInstanceUID from Lua scripts +* Option "CaseSensitivePN" to enable case-insensitive C-FIND SCP + +Fixes +----- + +* Prevent freeze on C-FIND if no DICOM tag is to be returned +* Fix slow C-STORE SCP on recent versions of GNU/Linux, if + USE_SYSTEM_DCMTK is set to OFF (http://forum.dcmtk.org/viewtopic.php?f=1&t=4009) +* Fix issue 30 (QR response missing "Query/Retrieve Level" (008,0052)) +* Fix issue 32 (Cyrillic symbols): Introduction of the "Windows1251" encoding +* Plugins now receive duplicated GET arguments in their REST callbacks + + +Version 0.8.6 (2015/02/12) +========================== + +Major +----- + +* URIs to get all the parents of a given resource in a single REST call +* Instances without PatientID are now allowed +* Support of HTTP proxy to access Orthanc peers + +Minor +----- + +* Support of Tudor DICOM in Query/Retrieve +* More flexible "/modify" and "/anonymize" for single instance +* Access to called AET and remote AET from Lua scripts ("OnStoredInstance") +* Option "DicomAssociationCloseDelay" to set delay before closing DICOM association +* ZIP archives now display the accession number of the studies + +Plugins +------- + +* Introspection of plugins (cf. the "/plugins" URI) +* Plugins can access the command-line arguments used to launch Orthanc +* Plugins can extend Orthanc Explorer with custom JavaScript +* Plugins can get/set global properties to save their configuration +* Plugins can do REST calls to other plugins (cf. "xxxAfterPlugins()") +* Scan of folders for plugins + +Fixes +----- + +* Code refactorings +* Fix issue 25 (AET with underscore not allowed) +* Fix replacement and insertion of private DICOM tags +* Fix anonymization generating non-portable DICOM files + + +Version 0.8.5 (2014/11/04) +========================== + +General +------- + +* Major speed-up thanks to a new database schema +* Plugins can monitor changes through callbacks +* Download ZIP + DICOMDIR from Orthanc Explorer +* Sample plugin framework to serve static resources (./Plugins/Samples/WebSkeleton/) + +Fixes +----- + +* Fix issue 19 (YBR_FULL are decoded incorrectly) +* Fix issue 21 (Microsoft Visual Studio precompiled headers) +* Fix issue 22 (Error decoding multi-frame instances) +* Fix issue 24 (Build fails on OSX when directory has .DS_Store files) +* Fix crash when bad HTTP credentials are provided + + +Version 0.8.4 (2014/09/19) +========================== + +* "/instances-tags" to get the tags of all the child instances of a + patient/study/series with a single REST call (bulk tags retrieval) +* Configuration/Lua to select the accepted C-STORE SCP transfer syntaxes +* Fix reporting of errors in Orthanc Explorer when sending images to peers/modalities +* Installation of plugin SDK in CMake + + +Version 0.8.3 (2014/09/11) +========================== + +Major +----- + +* Creation of ZIP archives for media storage, with DICOMDIR +* URIs to get all the children of a given resource in a single REST call +* "/tools/lookup" URI to map DICOM UIDs to Orthanc identifiers +* Support of index-only mode (using the "StoreDicom" option) +* Plugins can implement a custom storage area + +Minor +----- + +* Configuration option to enable HTTP Keep-Alive +* Configuration option to disable the logging of exported resources in "/exports" +* Plugins can retrieve the path to Orthanc and to its configuration file +* "/tools/create-dicom" now accepts the "PatientID" DICOM tag (+ updated sample) +* Possibility to set HTTP headers from plugins +* "LastUpdate" metadata is now always returned for patients, studies and series + +Maintenance +----------- + +* Refactoring of HttpOutput ("Content-Length" header is now always sent) +* Upgrade to Mongoose 3.8 +* Fixes for Visual Studio 2013 and Windows 64bit +* Fix issue 16: Handling of "AT" value representations in JSON +* Fix issue 17 + + +Version 0.8.2 (2014/08/07) +========================== + +* Support of the standard text encodings +* Hot restart of Orthanc by posting to "/tools/reset" +* More fault-tolerant commands in Lua scripts +* Parameter to set the default encoding for DICOM files without SpecificCharacterSet +* Fix of issue #14 (support of XCode 5.1) +* Upgrade to Google Test 1.7.0 + + +Version 0.8.1 (2014/07/29) +========================== + +General +------- + +* Access patient module at the study level to cope with PatientID collisions +* On-the-fly conversion of JSON to XML according to the HTTP Accept header +* C-Echo SCU in the REST API +* DICOM conformance statement available at URI "/tools/dicom-conformance" + +Lua scripts +----------- + +* Lua scripts can do HTTP requests, and thus can call Web services +* Lua scripts can invoke system commands, with CallSystem() + +Plugins +------- + +* Lookup for DICOM UIDs in the plugin SDK +* Plugins have access to the HTTP headers and can answer with HTTP status codes +* Callback to react to the incoming of DICOM instances + +Fixes +----- + +* Fix build of Google Log with Visual Studio >= 11.0 +* Fix automated generation of the list of resource children in the REST API + + +Version 0.8.0 (2014/07/10) +========================== + +Major changes +------------- + +* Routing images with Lua scripts +* Introduction of the Orthanc Plugin SDK +* Official support of OS X (Darwin) 10.8 + +Minor changes +------------- + +* Extraction of tags for the patient/study/series/instance DICOM modules +* Extraction of the tags shared by all the instances of a patient/study/series +* Options to limit the number of results for an incoming C-FIND query +* Support of kFreeBSD +* Several code refactorings +* Fix OrthancCppClient::GetVoxelSizeZ() + + +Version 0.7.6 (2014/06/11) +========================== + +* Support of JPEG and JPEG-LS decompression +* Download DICOM images as Matlab/Octave arrays +* Precompiled headers for Microsoft Visual Studio + + +Version 0.7.5 (2014/05/08) +========================== + +* Dynamic negotiation of SOP classes for C-STORE SCU +* Creation of DICOM instances using the REST API +* Embedding of images within DICOM instances +* Adding/removal/modification of remote modalities/peers through REST +* Reuse of the previous SCU connection to avoid unnecessary handshakes +* Fix problems with anonymization and modification +* Fix missing licensing terms about reuse of some code from DCMTK +* Various code refactorings + + +Version 0.7.4 (2014/04/16) +========================== + +* Switch to openssl-1.0.1g in static builds (cf. Heartbleed exploit) +* Switch to boost 1.55.0 in static builds (to solve compiling errors) +* Better logging about nonexistent tags +* Dcm4Chee manufacturer +* Automatic discovering of the path to the DICOM dictionaries +* In the "DicomModalities" config, the port number can be a string + + +Version 0.7.3 (2014/02/14) +========================== + +Major changes +------------- + +* Fixes in the implementation of the C-FIND handler for Query/Retrieve +* Custom attachment of files to patients, studies, series or instances +* Access to lowlevel info about the attached files through the REST API +* Recover pixel data for more transfer syntaxes (notably JPEG) + +Minor changes +------------- + +* AET comparison is now case-insensitive by default +* Possibility to disable the HTTP server or the DICOM server +* Automatic computation of MD5 hashes for the stored DICOM files +* Maintenance tool to recover DICOM files compressed by Orthanc +* The newline characters in the configuration file are fixed for GNU/Linux +* Capture of the SIGTERM signal in GNU/Linux + + +Version 0.7.2 (2013/11/08) +========================== + +* Support of Query/Retrieve from medInria +* Accept more transfer syntaxes for C-STORE SCP and SCU (notably JPEG) +* Create the meta-header when receiving files through C-STORE SCP +* Fixes and improvements thanks to the static analyzer cppcheck + + +Version 0.7.1 (2013/10/30) +========================== + +* Use ZIP64 only when required to improve compatibility (cf. issue #7) +* Refactoring of the CMake options +* Fix for big-endian architectures (RedHat bug #985748) +* Use filenames with 8 characters in ZIP files for maximum compatibility +* Possibility to build Orthanc inplace (in the source directory) + + +Version 0.7.0 (2013/10/25) +========================== + +Major changes +------------- + +* DICOM Query/Retrieve is supported + +Minor changes +------------- + +* Possibility to keep the PatientID during an anonymization +* Check whether "unzip", "tar" and/or "7-zip" are installed from CMake + + +Version 0.6.2 (2013/10/04) +========================== + +* Build of the C++ client as a shared library +* Improvements and documentation of the C++ client API +* Fix of Debian bug #724947 (licensing issue with the SHA-1 library) +* Switch to Boost 1.54.0 (cf. issue #9) +* "make uninstall" is now possible + + +Version 0.6.1 (2013/09/16) +========================== + +* Detection of stable patients/studies/series +* C-FIND SCU at the instance level +* Link from modified to original resource in Orthanc Explorer +* Fix of issue #8 +* Anonymization of the medical alerts tag (0010,2000) + + +Version 0.6.0 (2013/07/16) +========================== + +Major changes +------------- + +* Introduction of the C++ client +* Send DICOM resources to other Orthanc instances through HTTP +* Access to signed images (instances/.../image-int16) + (Closes: Debian #716958) + +Minor changes +------------- + +* Export of DICOM files to the host filesystem (instances/.../export) +* Statistics about patients, studies, series and instances +* Link from anonymized to original resource in Orthanc Explorer +* Fixes for Red Hat and Debian packaging +* Fixes for history in Orthanc Explorer +* Fixes for boost::thread, as reported by Cyril Paulus +* Fix licensing (Closes: Debian #712038) + +Metadata +-------- + +* Access to the metadata through the REST API (.../metadata) +* Support of user-defined metadata +* "LastUpdate" metadata for patients, studies and series +* "/tools/now" to be used in combination with "LastUpdate" +* Improved support of series with temporal positions + + +Version 0.5.2 (2013/05/07) +========================== + +* "Bulk" Store-SCU (send several DICOM instances with the same + DICOM connection) +* Store-SCU for patients and studies in Orthanc Explorer +* Filtering of incoming DICOM instances (through Lua scripting) +* Filtering of incoming HTTP requests (through Lua scripting) +* Clearing of "/exports" and "/changes" +* Check MD5 of third party downloads +* Faking of the HTTP methods PUT and DELETE + + +Version 0.5.1 (2013/04/17) +========================== + +* Support of RGB images +* Fix of store SCU in release builds +* Possibility to store the SQLite index at another place than the + DICOM instances (for performance) + + +Version 0.5.0 (2013/01/31) +========================== + +Major changes +------------- + +* Download of modified or anonymized DICOM instances +* Inplace modification and anonymization of DICOM series, studies and patients + +Minor changes +------------- + +* Support of private tags +* Implementation of the PMSCT_RLE1 image decoding for Philips modalities +* Generation of random DICOM UID through the REST API (/tools/generate-uid) + + +Version 0.4.0 (2012/12/14) +========================== + +Major changes +------------- + +* Recycling of disk space +* Raw access to the value of the DICOM tags in the REST API + +Minor changes +------------- + +* Protection of patients against recycling (also in Orthanc Explorer) +* The DICOM dictionaries are embedded in Windows builds + + +Version 0.3.1 (2012/12/05) +========================== + +* Download archives of patients, studies and series as ZIP files +* Orthanc now checks the version of its database schema before starting + + +Version 0.3.0 (2012/11/30) +========================== + +Major changes +------------- + +* Transparent compression of the DICOM instances on the disk +* The patient/study/series/instances are now indexed by SHA-1 digests + of their DICOM Instance IDs (and not by UUIDs anymore): The same + DICOM objects are thus always identified by the same Orthanc IDs +* Log of exported instances through DICOM C-STORE SCU ("/exported" URI) +* Full refactoring of the DB schema and of the REST API +* Introduction of generic classes for REST APIs (in Core/RestApi) + +Minor changes +------------- + +* "/statistics" URI +* "last" flag to retrieve the last change from the "/changes" URI +* Generate a sample configuration file from command line +* "CompletedSeries" event in the changes API +* Thread to continuously flush DB to disk (SQLite checkpoints for + improved robustness) + + +Version 0.2.3 (2012/10/26) +========================== + +* Use HTTP Content-Disposition to set a filename when downloading JSON/DCM +* URI "/system" for general information about Orthanc +* Versioning info and help on the command line +* Improved logging +* Possibility of dynamic linking against jsoncpp, sqlite, boost and dmctk + for Debian packaging +* Fix some bugs +* Switch to default 8042 port for HTTP + + +Version 0.2.2 (2012/10/04) +========================== + +* Switch to Google Log +* Fixes to Debian packaging + + +Version 0.2.1 (2012/09/28) +========================== + +* Status of series +* Continuous Integration Server is up and running +* Ready for Debian packaging + + +Version 0.2.0 (2012/09/16) +========================== + +Major changes +------------- + +* Renaming to "Orthanc" +* Focus on security: Support of SSL, HTTP Basic Authentication and + interdiction of remote access +* Access to multi-frame images (for nuclear medicine) +* Access to the raw PNG images (in 8bpp and 16bpp) + +Minor changes +------------- + +* Change of the licensing of the "Core/SQLite" folder to BSD (to + reflect the original licensing terms of Chromium, from which the + code derives) +* Standalone build for cross-compilation + + +Version 0.1.1 (2012/07/20) +========================== + +* Fix Windows version +* Native Windows build with Microsoft Visual Studio 2005 +* Add path to storage in Configuration.json + + +Version 0.1.0 (2012/07/19) +========================== + +* Initial release
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/DicomDatasetReader.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,173 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "DicomDatasetReader.h" + +#include "OrthancPluginException.h" + +#include <boost/lexical_cast.hpp> + +namespace OrthancPlugins +{ + // This function is copied-pasted from "../../../Core/Toolbox.cpp", + // in order to avoid the dependency of plugins against the Orthanc core + static std::string StripSpaces(const std::string& source) + { + size_t first = 0; + + while (first < source.length() && + isspace(source[first])) + { + first++; + } + + if (first == source.length()) + { + // String containing only spaces + return ""; + } + + size_t last = source.length(); + while (last > first && + isspace(source[last - 1])) + { + last--; + } + + assert(first <= last); + return source.substr(first, last - first); + } + + + DicomDatasetReader::DicomDatasetReader(const IDicomDataset& dataset) : + dataset_(dataset) + { + } + + + std::string DicomDatasetReader::GetStringValue(const DicomPath& path, + const std::string& defaultValue) const + { + std::string s; + if (dataset_.GetStringValue(s, path)) + { + return s; + } + else + { + return defaultValue; + } + } + + + std::string DicomDatasetReader::GetMandatoryStringValue(const DicomPath& path) const + { + std::string s; + if (dataset_.GetStringValue(s, path)) + { + return s; + } + else + { + ORTHANC_PLUGINS_THROW_EXCEPTION(InexistentTag); + } + } + + + template <typename T> + static bool GetValueInternal(T& target, + const IDicomDataset& dataset, + const DicomPath& path) + { + try + { + std::string s; + + if (dataset.GetStringValue(s, path)) + { + target = boost::lexical_cast<T>(StripSpaces(s)); + return true; + } + else + { + return false; + } + } + catch (boost::bad_lexical_cast&) + { + ORTHANC_PLUGINS_THROW_EXCEPTION(BadFileFormat); + } + } + + + bool DicomDatasetReader::GetIntegerValue(int& target, + const DicomPath& path) const + { + return GetValueInternal<int>(target, dataset_, path); + } + + + bool DicomDatasetReader::GetUnsignedIntegerValue(unsigned int& target, + const DicomPath& path) const + { + int value; + + if (!GetIntegerValue(value, path)) + { + return false; + } + else if (value >= 0) + { + target = static_cast<unsigned int>(value); + return true; + } + else + { + ORTHANC_PLUGINS_THROW_EXCEPTION(ParameterOutOfRange); + } + } + + + bool DicomDatasetReader::GetFloatValue(float& target, + const DicomPath& path) const + { + return GetValueInternal<float>(target, dataset_, path); + } + + + bool DicomDatasetReader::GetDoubleValue(double& target, + const DicomPath& path) const + { + return GetValueInternal<double>(target, dataset_, path); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/DicomDatasetReader.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,73 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "IDicomDataset.h" + +#include <memory> +#include <vector> + +namespace OrthancPlugins +{ + class DicomDatasetReader : public boost::noncopyable + { + private: + const IDicomDataset& dataset_; + + public: + DicomDatasetReader(const IDicomDataset& dataset); + + const IDicomDataset& GetDataset() const + { + return dataset_; + } + + std::string GetStringValue(const DicomPath& path, + const std::string& defaultValue) const; + + std::string GetMandatoryStringValue(const DicomPath& path) const; + + bool GetIntegerValue(int& target, + const DicomPath& path) const; + + bool GetUnsignedIntegerValue(unsigned int& target, + const DicomPath& path) const; + + bool GetFloatValue(float& target, + const DicomPath& path) const; + + bool GetDoubleValue(double& target, + const DicomPath& path) const; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/DicomPath.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,87 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "DicomPath.h" + +#include "OrthancPluginException.h" + +namespace OrthancPlugins +{ + const DicomPath::Prefix& DicomPath::GetPrefixItem(size_t depth) const + { + if (depth >= prefix_.size()) + { + ORTHANC_PLUGINS_THROW_EXCEPTION(ParameterOutOfRange); + } + else + { + return prefix_[depth]; + } + } + + + DicomPath::DicomPath(const DicomTag& sequence, + size_t index, + const DicomTag& tag) : + finalTag_(tag) + { + AddToPrefix(sequence, index); + } + + + DicomPath::DicomPath(const DicomTag& sequence1, + size_t index1, + const DicomTag& sequence2, + size_t index2, + const DicomTag& tag) : + finalTag_(tag) + { + AddToPrefix(sequence1, index1); + AddToPrefix(sequence2, index2); + } + + + DicomPath::DicomPath(const DicomTag& sequence1, + size_t index1, + const DicomTag& sequence2, + size_t index2, + const DicomTag& sequence3, + size_t index3, + const DicomTag& tag) : + finalTag_(tag) + { + AddToPrefix(sequence1, index1); + AddToPrefix(sequence2, index2); + AddToPrefix(sequence3, index3); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/DicomPath.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,108 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "DicomTag.h" + +#include <vector> +#include <stddef.h> + +namespace OrthancPlugins +{ + class DicomPath + { + private: + typedef std::pair<DicomTag, size_t> Prefix; + + std::vector<Prefix> prefix_; + DicomTag finalTag_; + + const Prefix& GetPrefixItem(size_t depth) const; + + public: + DicomPath(const DicomTag& finalTag) : + finalTag_(finalTag) + { + } + + DicomPath(const DicomTag& sequence, + size_t index, + const DicomTag& tag); + + DicomPath(const DicomTag& sequence1, + size_t index1, + const DicomTag& sequence2, + size_t index2, + const DicomTag& tag); + + DicomPath(const DicomTag& sequence1, + size_t index1, + const DicomTag& sequence2, + size_t index2, + const DicomTag& sequence3, + size_t index3, + const DicomTag& tag); + + void AddToPrefix(const DicomTag& tag, + size_t position) + { + prefix_.push_back(std::make_pair(tag, position)); + } + + size_t GetPrefixLength() const + { + return prefix_.size(); + } + + DicomTag GetPrefixTag(size_t depth) const + { + return GetPrefixItem(depth).first; + } + + size_t GetPrefixIndex(size_t depth) const + { + return GetPrefixItem(depth).second; + } + + const DicomTag& GetFinalTag() const + { + return finalTag_; + } + + void SetFinalTag(const DicomTag& tag) + { + finalTag_ = tag; + } + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/DicomTag.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,106 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include <stdint.h> + +namespace OrthancPlugins +{ + class DicomTag + { + private: + uint16_t group_; + uint16_t element_; + + DicomTag(); // Forbidden + + public: + DicomTag(uint16_t group, + uint16_t element) : + group_(group), + element_(element) + { + } + + uint16_t GetGroup() const + { + return group_; + } + + uint16_t GetElement() const + { + return element_; + } + + const char* GetName() const; + + bool operator== (const DicomTag& other) const + { + return group_ == other.group_ && element_ == other.element_; + } + + bool operator!= (const DicomTag& other) const + { + return !(*this == other); + } + }; + + + static const DicomTag DICOM_TAG_BITS_STORED(0x0028, 0x0101); + static const DicomTag DICOM_TAG_COLUMNS(0x0028, 0x0011); + static const DicomTag DICOM_TAG_COLUMN_POSITION_IN_TOTAL_IMAGE_PIXEL_MATRIX(0x0048, 0x021e); + static const DicomTag DICOM_TAG_IMAGE_ORIENTATION_PATIENT(0x0020, 0x0037); + static const DicomTag DICOM_TAG_IMAGE_POSITION_PATIENT(0x0020, 0x0032); + static const DicomTag DICOM_TAG_MODALITY(0x0008, 0x0060); + static const DicomTag DICOM_TAG_NUMBER_OF_FRAMES(0x0028, 0x0008); + static const DicomTag DICOM_TAG_PER_FRAME_FUNCTIONAL_GROUPS_SEQUENCE(0x5200, 0x9230); + static const DicomTag DICOM_TAG_PHOTOMETRIC_INTERPRETATION(0x0028, 0x0004); + static const DicomTag DICOM_TAG_PIXEL_REPRESENTATION(0x0028, 0x0103); + static const DicomTag DICOM_TAG_PIXEL_SPACING(0x0028, 0x0030); + static const DicomTag DICOM_TAG_PLANE_POSITION_SLIDE_SEQUENCE(0x0048, 0x021a); + static const DicomTag DICOM_TAG_RESCALE_INTERCEPT(0x0028, 0x1052); + static const DicomTag DICOM_TAG_RESCALE_SLOPE(0x0028, 0x1053); + static const DicomTag DICOM_TAG_ROWS(0x0028, 0x0010); + static const DicomTag DICOM_TAG_ROW_POSITION_IN_TOTAL_IMAGE_PIXEL_MATRIX(0x0048, 0x021f); + static const DicomTag DICOM_TAG_SAMPLES_PER_PIXEL(0x0028, 0x0002); + static const DicomTag DICOM_TAG_SERIES_INSTANCE_UID(0x0020, 0x000e); + static const DicomTag DICOM_TAG_SLICE_THICKNESS(0x0018, 0x0050); + static const DicomTag DICOM_TAG_SOP_CLASS_UID(0x0008, 0x0016); + static const DicomTag DICOM_TAG_SOP_INSTANCE_UID(0x0008, 0x0018); + static const DicomTag DICOM_TAG_TOTAL_PIXEL_MATRIX_COLUMNS(0x0048, 0x0006); + static const DicomTag DICOM_TAG_TOTAL_PIXEL_MATRIX_ROWS(0x0048, 0x0007); + static const DicomTag DICOM_TAG_TRANSFER_SYNTAX_UID(0x0002, 0x0010); + static const DicomTag DICOM_TAG_WINDOW_CENTER(0x0028, 0x1050); + static const DicomTag DICOM_TAG_WINDOW_WIDTH(0x0028, 0x1051); +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/FullOrthancDataset.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,215 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "FullOrthancDataset.h" + +#include "OrthancPluginException.h" + +#include <stdio.h> +#include <cassert> + +namespace OrthancPlugins +{ + static const Json::Value* AccessTag(const Json::Value& dataset, + const DicomTag& tag) + { + if (dataset.type() != Json::objectValue) + { + ORTHANC_PLUGINS_THROW_EXCEPTION(BadFileFormat); + } + + char name[16]; + sprintf(name, "%04x,%04x", tag.GetGroup(), tag.GetElement()); + + if (!dataset.isMember(name)) + { + return NULL; + } + + const Json::Value& value = dataset[name]; + if (value.type() != Json::objectValue || + !value.isMember("Name") || + !value.isMember("Type") || + !value.isMember("Value") || + value["Name"].type() != Json::stringValue || + value["Type"].type() != Json::stringValue) + { + ORTHANC_PLUGINS_THROW_EXCEPTION(BadFileFormat); + } + + return &value; + } + + + static const Json::Value& GetSequenceContent(const Json::Value& sequence) + { + assert(sequence.type() == Json::objectValue); + assert(sequence.isMember("Type")); + assert(sequence.isMember("Value")); + + const Json::Value& value = sequence["Value"]; + + if (sequence["Type"].asString() != "Sequence" || + value.type() != Json::arrayValue) + { + ORTHANC_PLUGINS_THROW_EXCEPTION(BadFileFormat); + } + else + { + return value; + } + } + + + static bool GetStringInternal(std::string& result, + const Json::Value& tag) + { + assert(tag.type() == Json::objectValue); + assert(tag.isMember("Type")); + assert(tag.isMember("Value")); + + const Json::Value& value = tag["Value"]; + + if (tag["Type"].asString() != "String" || + value.type() != Json::stringValue) + { + ORTHANC_PLUGINS_THROW_EXCEPTION(BadFileFormat); + } + else + { + result = value.asString(); + return true; + } + } + + + const Json::Value* FullOrthancDataset::LookupPath(const DicomPath& path) const + { + const Json::Value* content = &root_; + + for (unsigned int depth = 0; depth < path.GetPrefixLength(); depth++) + { + const Json::Value* sequence = AccessTag(*content, path.GetPrefixTag(depth)); + if (sequence == NULL) + { + return NULL; + } + + const Json::Value& nextContent = GetSequenceContent(*sequence); + + size_t index = path.GetPrefixIndex(depth); + if (index >= nextContent.size()) + { + return NULL; + } + else + { + content = &nextContent[static_cast<Json::Value::ArrayIndex>(index)]; + } + } + + return AccessTag(*content, path.GetFinalTag()); + } + + + void FullOrthancDataset::CheckRoot() const + { + if (root_.type() != Json::objectValue) + { + ORTHANC_PLUGINS_THROW_EXCEPTION(BadFileFormat); + } + } + + + FullOrthancDataset::FullOrthancDataset(IOrthancConnection& orthanc, + const std::string& uri) + { + IOrthancConnection::RestApiGet(root_, orthanc, uri); + CheckRoot(); + } + + + FullOrthancDataset::FullOrthancDataset(const std::string& content) + { + IOrthancConnection::ParseJson(root_, content); + CheckRoot(); + } + + + FullOrthancDataset::FullOrthancDataset(const void* content, + size_t size) + { + IOrthancConnection::ParseJson(root_, content, size); + CheckRoot(); + } + + + FullOrthancDataset::FullOrthancDataset(const Json::Value& root) : + root_(root) + { + CheckRoot(); + } + + + bool FullOrthancDataset::GetStringValue(std::string& result, + const DicomPath& path) const + { + const Json::Value* value = LookupPath(path); + + if (value == NULL) + { + return false; + } + else + { + return GetStringInternal(result, *value); + } + } + + + bool FullOrthancDataset::GetSequenceSize(size_t& size, + const DicomPath& path) const + { + const Json::Value* sequence = LookupPath(path); + + if (sequence == NULL) + { + return false; + } + else + { + size = GetSequenceContent(*sequence).size(); + return true; + } + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/FullOrthancDataset.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,69 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "IOrthancConnection.h" +#include "IDicomDataset.h" + +#include <json/value.h> + +namespace OrthancPlugins +{ + class FullOrthancDataset : public IDicomDataset + { + private: + Json::Value root_; + + const Json::Value* LookupPath(const DicomPath& path) const; + + void CheckRoot() const; + + public: + FullOrthancDataset(IOrthancConnection& orthanc, + const std::string& uri); + + FullOrthancDataset(const std::string& content); + + FullOrthancDataset(const void* content, + size_t size); + + FullOrthancDataset(const Json::Value& root); + + virtual bool GetStringValue(std::string& result, + const DicomPath& path) const; + + virtual bool GetSequenceSize(size_t& size, + const DicomPath& path) const; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/IDicomDataset.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,56 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "DicomPath.h" + +#include <boost/noncopyable.hpp> +#include <string> + +namespace OrthancPlugins +{ + class IDicomDataset : public boost::noncopyable + { + public: + virtual ~IDicomDataset() + { + } + + virtual bool GetStringValue(std::string& result, + const DicomPath& path) const = 0; + + virtual bool GetSequenceSize(size_t& size, + const DicomPath& path) const = 0; + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/IOrthancConnection.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,98 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "IOrthancConnection.h" + +#include "OrthancPluginException.h" + +#include <json/reader.h> + +namespace OrthancPlugins +{ + void IOrthancConnection::ParseJson(Json::Value& result, + const std::string& content) + { + Json::Reader reader; + + if (!reader.parse(content, result)) + { + ORTHANC_PLUGINS_THROW_EXCEPTION(BadFileFormat); + } + } + + + void IOrthancConnection::ParseJson(Json::Value& result, + const void* content, + size_t size) + { + Json::Reader reader; + + if (!reader.parse(reinterpret_cast<const char*>(content), + reinterpret_cast<const char*>(content) + size, result)) + { + ORTHANC_PLUGINS_THROW_EXCEPTION(BadFileFormat); + } + } + + + void IOrthancConnection::RestApiGet(Json::Value& result, + IOrthancConnection& orthanc, + const std::string& uri) + { + std::string content; + orthanc.RestApiGet(content, uri); + ParseJson(result, content); + } + + + void IOrthancConnection::RestApiPost(Json::Value& result, + IOrthancConnection& orthanc, + const std::string& uri, + const std::string& body) + { + std::string content; + orthanc.RestApiPost(content, uri, body); + ParseJson(result, content); + } + + + void IOrthancConnection::RestApiPut(Json::Value& result, + IOrthancConnection& orthanc, + const std::string& uri, + const std::string& body) + { + std::string content; + orthanc.RestApiPut(content, uri, body); + ParseJson(result, content); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/IOrthancConnection.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,85 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "DicomPath.h" + +#include <boost/noncopyable.hpp> +#include <string> +#include <json/value.h> + +namespace OrthancPlugins +{ + class IOrthancConnection : public boost::noncopyable + { + public: + virtual ~IOrthancConnection() + { + } + + virtual void RestApiGet(std::string& result, + const std::string& uri) = 0; + + virtual void RestApiPost(std::string& result, + const std::string& uri, + const std::string& body) = 0; + + virtual void RestApiPut(std::string& result, + const std::string& uri, + const std::string& body) = 0; + + virtual void RestApiDelete(const std::string& uri) = 0; + + static void ParseJson(Json::Value& result, + const std::string& content); + + static void ParseJson(Json::Value& result, + const void* content, + size_t size); + + static void RestApiGet(Json::Value& result, + IOrthancConnection& orthanc, + const std::string& uri); + + static void RestApiPost(Json::Value& result, + IOrthancConnection& orthanc, + const std::string& uri, + const std::string& body); + + static void RestApiPut(Json::Value& result, + IOrthancConnection& orthanc, + const std::string& uri, + const std::string& body); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/OrthancHttpConnection.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,108 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#include "OrthancHttpConnection.h" + +namespace OrthancPlugins +{ + void OrthancHttpConnection::Setup() + { + url_ = client_.GetUrl(); + + // Don't follow 3xx HTTP (avoid redirections to "unsupported.png" in Orthanc) + client_.SetRedirectionFollowed(false); + } + + + OrthancHttpConnection::OrthancHttpConnection() : + client_(Orthanc::WebServiceParameters(), "") + { + Setup(); + } + + + OrthancHttpConnection::OrthancHttpConnection(const Orthanc::WebServiceParameters& parameters) : + client_(parameters, "") + { + Setup(); + } + + + void OrthancHttpConnection::RestApiGet(std::string& result, + const std::string& uri) + { + boost::mutex::scoped_lock lock(mutex_); + + client_.SetMethod(Orthanc::HttpMethod_Get); + client_.SetUrl(url_ + uri); + client_.ApplyAndThrowException(result); + } + + + void OrthancHttpConnection::RestApiPost(std::string& result, + const std::string& uri, + const std::string& body) + { + boost::mutex::scoped_lock lock(mutex_); + + client_.SetMethod(Orthanc::HttpMethod_Post); + client_.SetUrl(url_ + uri); + client_.SetBody(body); + client_.ApplyAndThrowException(result); + } + + + void OrthancHttpConnection::RestApiPut(std::string& result, + const std::string& uri, + const std::string& body) + { + boost::mutex::scoped_lock lock(mutex_); + + client_.SetMethod(Orthanc::HttpMethod_Put); + client_.SetUrl(url_ + uri); + client_.SetBody(body); + client_.ApplyAndThrowException(result); + } + + + void OrthancHttpConnection::RestApiDelete(const std::string& uri) + { + boost::mutex::scoped_lock lock(mutex_); + + std::string result; + + client_.SetMethod(Orthanc::HttpMethod_Delete); + client_.SetUrl(url_ + uri); + client_.ApplyAndThrowException(result); + } +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/OrthancHttpConnection.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,76 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#include "IOrthancConnection.h" + +#if HAS_ORTHANC_EXCEPTION != 1 +# error The macro HAS_ORTHANC_EXCEPTION must be set to 1 if using this header +#endif + +#include "../../../Core/HttpClient.h" + +#include <boost/thread/mutex.hpp> + +namespace OrthancPlugins +{ + // This class is thread-safe + class OrthancHttpConnection : public IOrthancConnection + { + private: + boost::mutex mutex_; + Orthanc::HttpClient client_; + std::string url_; + + void Setup(); + + public: + OrthancHttpConnection(); + + OrthancHttpConnection(const Orthanc::WebServiceParameters& parameters); + + virtual void RestApiGet(std::string& result, + const std::string& uri); + + virtual void RestApiPost(std::string& result, + const std::string& uri, + const std::string& body); + + virtual void RestApiPut(std::string& result, + const std::string& uri, + const std::string& body); + + virtual void RestApiDelete(const std::string& uri); + }; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Plugins/Samples/Common/OrthancPluginException.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,101 @@ +/** + * Orthanc - A Lightweight, RESTful DICOM Store + * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics + * Department, University Hospital of Liege, Belgium + * Copyright (C) 2017-2018 Osimis S.A., Belgium + * + * This program is free software: you can redistribute it and/or + * modify it under the terms of the GNU General Public License as + * published by the Free Software Foundation, either version 3 of the + * License, or (at your option) any later version. + * + * In addition, as a special exception, the copyright holders of this + * program give permission to link the code of its release with the + * OpenSSL project's "OpenSSL" library (or with modified versions of it + * that use the same license as the "OpenSSL" library), and distribute + * the linked executables. You must obey the GNU General Public License + * in all respects for all of the code used other than "OpenSSL". If you + * modify file(s) with this exception, you may extend this exception to + * your version of the file(s), but you are not obligated to do so. If + * you do not wish to do so, delete this exception statement from your + * version. If you delete this exception statement from all source files + * in the program, then also delete it here. + * + * This program is distributed in the hope that it will be useful, but + * WITHOUT ANY WARRANTY; without even the implied warranty of + * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU + * General Public License for more details. + * + * You should have received a copy of the GNU General Public License + * along with this program. If not, see <http://www.gnu.org/licenses/>. + **/ + + +#pragma once + +#if !defined(HAS_ORTHANC_EXCEPTION) +# error The macro HAS_ORTHANC_EXCEPTION must be defined +#endif + + +#if HAS_ORTHANC_EXCEPTION == 1 +# include "../../../Core/OrthancException.h" +# define ORTHANC_PLUGINS_ERROR_ENUMERATION ::Orthanc::ErrorCode +# define ORTHANC_PLUGINS_EXCEPTION_CLASS ::Orthanc::OrthancException +# define ORTHANC_PLUGINS_GET_ERROR_CODE(code) ::Orthanc::ErrorCode_ ## code +#else +# include <orthanc/OrthancCPlugin.h> +# define ORTHANC_PLUGINS_ERROR_ENUMERATION ::OrthancPluginErrorCode +# define ORTHANC_PLUGINS_EXCEPTION_CLASS ::OrthancPlugins::PluginException +# define ORTHANC_PLUGINS_GET_ERROR_CODE(code) ::OrthancPluginErrorCode_ ## code +#endif + + +#define ORTHANC_PLUGINS_THROW_PLUGIN_ERROR_CODE(code) \ + throw ORTHANC_PLUGINS_EXCEPTION_CLASS(static_cast<ORTHANC_PLUGINS_ERROR_ENUMERATION>(code)); + + +#define ORTHANC_PLUGINS_THROW_EXCEPTION(code) \ + throw ORTHANC_PLUGINS_EXCEPTION_CLASS(ORTHANC_PLUGINS_GET_ERROR_CODE(code)); + + +#define ORTHANC_PLUGINS_CHECK_ERROR(code) \ + if (code != ORTHANC_PLUGINS_GET_ERROR_CODE(Success)) \ + { \ + ORTHANC_PLUGINS_THROW_EXCEPTION(code); \ + } + + +namespace OrthancPlugins +{ +#if HAS_ORTHANC_EXCEPTION == 0 + class PluginException + { + private: + OrthancPluginErrorCode code_; + + public: + explicit PluginException(OrthancPluginErrorCode code) : code_(code) + { + } + + OrthancPluginErrorCode GetErrorCode() const + { + return code_; + } + + const char* What(OrthancPluginContext* context) const + { + const char* description = OrthancPluginGetErrorDescription(context, code_); + if (description) + { + return description; + } + else + { + return "No description available"; + } + } + }; +#endif +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/README.txt Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,3 @@ +This folder contains an excerpt of the source code of Orthanc. It is +automatically generated using the "../Resources/SyncOrthancFolder.py" +script.
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/AutoGeneratedCode.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,53 @@ +set(AUTOGENERATED_DIR "${CMAKE_CURRENT_BINARY_DIR}/AUTOGENERATED") +set(AUTOGENERATED_SOURCES) + +file(MAKE_DIRECTORY ${AUTOGENERATED_DIR}) +include_directories(${AUTOGENERATED_DIR}) + +macro(EmbedResources) + # Convert a semicolon separated list to a whitespace separated string + set(SCRIPT_OPTIONS) + set(SCRIPT_ARGUMENTS) + set(DEPENDENCIES) + set(IS_PATH_NAME false) + + # Loop over the arguments of the function + foreach(arg ${ARGN}) + # Extract the first character of the argument + string(SUBSTRING "${arg}" 0 1 FIRST_CHAR) + if (${FIRST_CHAR} STREQUAL "-") + # If the argument starts with a dash "-", this is an option to + # EmbedResources.py + list(APPEND SCRIPT_OPTIONS ${arg}) + else() + if (${IS_PATH_NAME}) + list(APPEND SCRIPT_ARGUMENTS "${arg}") + list(APPEND DEPENDENCIES "${arg}") + set(IS_PATH_NAME false) + else() + list(APPEND SCRIPT_ARGUMENTS "${arg}") + set(IS_PATH_NAME true) + endif() + endif() + endforeach() + + set(TARGET_BASE "${AUTOGENERATED_DIR}/EmbeddedResources") + add_custom_command( + OUTPUT + "${TARGET_BASE}.h" + "${TARGET_BASE}.cpp" + COMMAND + ${PYTHON_EXECUTABLE} + "${ORTHANC_ROOT}/Resources/EmbedResources.py" + ${SCRIPT_OPTIONS} + "${AUTOGENERATED_DIR}/EmbeddedResources" + ${SCRIPT_ARGUMENTS} + DEPENDS + "${ORTHANC_ROOT}/Resources/EmbedResources.py" + ${DEPENDENCIES} + ) + + list(APPEND AUTOGENERATED_SOURCES + "${AUTOGENERATED_DIR}/EmbeddedResources.cpp" + ) +endmacro()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/BoostConfiguration.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,306 @@ +if (STATIC_BUILD OR NOT USE_SYSTEM_BOOST) + set(BOOST_STATIC 1) +else() + include(FindBoost) + + set(BOOST_STATIC 0) + #set(Boost_DEBUG 1) + #set(Boost_USE_STATIC_LIBS ON) + + if (ENABLE_LOCALE) + list(APPEND ORTHANC_BOOST_COMPONENTS locale) + endif() + + list(APPEND ORTHANC_BOOST_COMPONENTS filesystem thread system date_time regex) + find_package(Boost COMPONENTS "${ORTHANC_BOOST_COMPONENTS}") + + if (NOT Boost_FOUND) + foreach (item ${ORTHANC_BOOST_COMPONENTS}) + string(TOUPPER ${item} tmp) + + if (Boost_${tmp}_FOUND) + set(tmp2 "found") + else() + set(tmp2 "missing") + endif() + + message("Boost component ${item} - ${tmp2}") + endforeach() + + message(FATAL_ERROR "Unable to locate Boost on this system") + endif() + + # Boost releases 1.44 through 1.47 supply both V2 and V3 filesystem + # http://www.boost.org/doc/libs/1_46_1/libs/filesystem/v3/doc/index.htm + if (${Boost_VERSION} LESS 104400) + add_definitions( + -DBOOST_HAS_FILESYSTEM_V3=0 + ) + else() + add_definitions( + -DBOOST_HAS_FILESYSTEM_V3=1 + -DBOOST_FILESYSTEM_VERSION=3 + ) + endif() + + include_directories(${Boost_INCLUDE_DIRS}) + link_libraries(${Boost_LIBRARIES}) +endif() + + +if (BOOST_STATIC) + ## + ## Parameters for static compilation of Boost + ## + + set(BOOST_NAME boost_1_65_1) + set(BOOST_BCP_SUFFIX bcpdigest-1.3.1) + set(BOOST_MD5 "92c9c603e56bbd7a450a305f08747d90") + set(BOOST_URL "http://www.orthanc-server.com/downloads/third-party/${BOOST_NAME}_${BOOST_BCP_SUFFIX}.tar.gz") + set(BOOST_SOURCES_DIR ${CMAKE_BINARY_DIR}/${BOOST_NAME}) + + if (IS_DIRECTORY "${BOOST_SOURCES_DIR}") + set(FirstRun OFF) + else() + set(FirstRun ON) + endif() + + DownloadPackage(${BOOST_MD5} ${BOOST_URL} "${BOOST_SOURCES_DIR}") + + + ## + ## Generic configuration of Boost + ## + + if (CMAKE_COMPILER_IS_GNUCXX) + add_definitions(-isystem ${BOOST_SOURCES_DIR}) + endif() + + include_directories( + ${BOOST_SOURCES_DIR} + ) + + add_definitions( + # Static build of Boost + -DBOOST_ALL_NO_LIB + -DBOOST_ALL_NOLIB + -DBOOST_DATE_TIME_NO_LIB + -DBOOST_THREAD_BUILD_LIB + -DBOOST_PROGRAM_OPTIONS_NO_LIB + -DBOOST_REGEX_NO_LIB + -DBOOST_SYSTEM_NO_LIB + -DBOOST_LOCALE_NO_LIB + ) + + set(BOOST_SOURCES + ${BOOST_SOURCES_DIR}/libs/system/src/error_code.cpp + ) + + if ("${CMAKE_SYSTEM_VERSION}" STREQUAL "LinuxStandardBase") + add_definitions(-DBOOST_SYSTEM_USE_STRERROR=1) + + execute_process( + COMMAND ${PATCH_EXECUTABLE} -p0 -N -i + ${ORTHANC_ROOT}/Resources/Patches/boost-1.65.1-linux-standard-base.patch + WORKING_DIRECTORY ${CMAKE_BINARY_DIR} + RESULT_VARIABLE Failure + ) + + if (FirstRun AND Failure) + message(FATAL_ERROR "Error while patching a file") + endif() + endif() + + + ## + ## Configuration of boost::thread + ## + + if (CMAKE_SYSTEM_NAME STREQUAL "Linux" OR + CMAKE_SYSTEM_NAME STREQUAL "Darwin" OR + CMAKE_SYSTEM_NAME STREQUAL "FreeBSD" OR + CMAKE_SYSTEM_NAME STREQUAL "kFreeBSD" OR + CMAKE_SYSTEM_NAME STREQUAL "OpenBSD" OR + CMAKE_SYSTEM_NAME STREQUAL "PNaCl" OR + CMAKE_SYSTEM_NAME STREQUAL "NaCl32" OR + CMAKE_SYSTEM_NAME STREQUAL "NaCl64") + list(APPEND BOOST_SOURCES + ${BOOST_SOURCES_DIR}/libs/atomic/src/lockpool.cpp + ${BOOST_SOURCES_DIR}/libs/thread/src/pthread/once.cpp + ${BOOST_SOURCES_DIR}/libs/thread/src/pthread/thread.cpp + ) + + if ("${CMAKE_SYSTEM_VERSION}" STREQUAL "LinuxStandardBase" OR + CMAKE_SYSTEM_NAME STREQUAL "PNaCl" OR + CMAKE_SYSTEM_NAME STREQUAL "NaCl32" OR + CMAKE_SYSTEM_NAME STREQUAL "NaCl64") + add_definitions(-DBOOST_HAS_SCHED_YIELD=1) + endif() + + elseif(CMAKE_SYSTEM_NAME STREQUAL "Windows") + list(APPEND BOOST_SOURCES + ${BOOST_SOURCES_DIR}/libs/thread/src/win32/tss_dll.cpp + ${BOOST_SOURCES_DIR}/libs/thread/src/win32/thread.cpp + ${BOOST_SOURCES_DIR}/libs/thread/src/win32/tss_pe.cpp + ) + + elseif (CMAKE_SYSTEM_NAME STREQUAL "Emscripten") + + else() + message(FATAL_ERROR "Support your platform here") + endif() + + + ## + ## Configuration of boost::regex + ## + + aux_source_directory(${BOOST_SOURCES_DIR}/libs/regex/src BOOST_REGEX_SOURCES) + + list(APPEND BOOST_SOURCES + ${BOOST_REGEX_SOURCES} + ) + + + ## + ## Configuration of boost::datetime + ## + + list(APPEND BOOST_SOURCES + ${BOOST_SOURCES_DIR}/libs/date_time/src/gregorian/greg_month.cpp + ) + + + ## + ## Configuration of boost::filesystem + ## + + if (CMAKE_SYSTEM_NAME STREQUAL "PNaCl" OR + CMAKE_SYSTEM_NAME STREQUAL "NaCl32" OR + CMAKE_SYSTEM_NAME STREQUAL "NaCl64") + # boost::filesystem is not available on PNaCl + add_definitions( + -DBOOST_HAS_FILESYSTEM_V3=0 + -D__INTEGRITY=1 + ) + else() + add_definitions( + -DBOOST_HAS_FILESYSTEM_V3=1 + ) + list(APPEND BOOST_SOURCES + ${BOOST_NAME}/libs/filesystem/src/codecvt_error_category.cpp + ${BOOST_NAME}/libs/filesystem/src/operations.cpp + ${BOOST_NAME}/libs/filesystem/src/path.cpp + ${BOOST_NAME}/libs/filesystem/src/path_traits.cpp + ) + + if (CMAKE_SYSTEM_NAME STREQUAL "Darwin" OR + CMAKE_SYSTEM_NAME STREQUAL "OpenBSD" OR + CMAKE_SYSTEM_NAME STREQUAL "FreeBSD") + list(APPEND BOOST_SOURCES + ${BOOST_SOURCES_DIR}/libs/filesystem/src/utf8_codecvt_facet.cpp + ) + + elseif (CMAKE_SYSTEM_NAME STREQUAL "Windows") + list(APPEND BOOST_SOURCES + ${BOOST_NAME}/libs/filesystem/src/windows_file_codecvt.cpp + ) + endif() + endif() + + + ## + ## Configuration of boost::locale + ## + + if (NOT ENABLE_LOCALE) + message("boost::locale is disabled") + else() + list(APPEND BOOST_SOURCES + ${BOOST_SOURCES_DIR}/libs/locale/src/encoding/codepage.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/shared/generator.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/shared/date_time.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/shared/formatting.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/shared/ids.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/shared/localization_backend.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/shared/message.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/shared/mo_lambda.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/util/codecvt_converter.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/util/default_locale.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/util/gregorian.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/util/info.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/util/locale_data.cpp + ) + + if (CMAKE_SYSTEM_NAME STREQUAL "OpenBSD" OR + CMAKE_SYSTEM_VERSION STREQUAL "LinuxStandardBase") + list(APPEND BOOST_SOURCES + ${BOOST_SOURCES_DIR}/libs/locale/src/std/codecvt.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/std/collate.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/std/converter.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/std/numeric.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/std/std_backend.cpp + ) + + add_definitions( + -DBOOST_LOCALE_WITH_ICONV=1 + -DBOOST_LOCALE_NO_WINAPI_BACKEND=1 + -DBOOST_LOCALE_NO_POSIX_BACKEND=1 + ) + + elseif (CMAKE_SYSTEM_NAME STREQUAL "Linux" OR + CMAKE_SYSTEM_NAME STREQUAL "Darwin" OR + CMAKE_SYSTEM_NAME STREQUAL "FreeBSD" OR + CMAKE_SYSTEM_NAME STREQUAL "kFreeBSD" OR + CMAKE_SYSTEM_NAME STREQUAL "PNaCl" OR + CMAKE_SYSTEM_NAME STREQUAL "NaCl32" OR + CMAKE_SYSTEM_NAME STREQUAL "NaCl64") + list(APPEND BOOST_SOURCES + ${BOOST_SOURCES_DIR}/libs/locale/src/posix/codecvt.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/posix/collate.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/posix/converter.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/posix/numeric.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/posix/posix_backend.cpp + ) + + add_definitions( + -DBOOST_LOCALE_WITH_ICONV=1 + -DBOOST_LOCALE_NO_WINAPI_BACKEND=1 + -DBOOST_LOCALE_NO_STD_BACKEND=1 + ) + + elseif (CMAKE_SYSTEM_NAME STREQUAL "Windows") + list(APPEND BOOST_SOURCES + ${BOOST_SOURCES_DIR}/libs/locale/src/win32/collate.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/win32/converter.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/win32/lcid.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/win32/numeric.cpp + ${BOOST_SOURCES_DIR}/libs/locale/src/win32/win_backend.cpp + ) + + add_definitions( + -DBOOST_LOCALE_NO_POSIX_BACKEND=1 + -DBOOST_LOCALE_NO_STD_BACKEND=1 + ) + + # Starting with release 0.8.2, Orthanc statically links against + # libiconv, even on Windows. Indeed, the "WCONV" library of + # Windows XP seems not to support properly several codepages + # (notably "Latin3", "Hebrew", and "Arabic"). Set + # "USE_BOOST_ICONV" to "OFF" to use WCONV anyway. + + if (USE_BOOST_ICONV) + add_definitions(-DBOOST_LOCALE_WITH_ICONV=1) + else() + add_definitions(-DBOOST_LOCALE_WITH_WCONV=1) + endif() + + else() + message(FATAL_ERROR "Support your platform here") + endif() + endif() + + + source_group(ThirdParty\\boost REGULAR_EXPRESSION ${BOOST_SOURCES_DIR}/.*) + +endif()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/Compiler.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,214 @@ +# This file sets all the compiler-related flags + +if (CMAKE_CROSSCOMPILING OR + "${CMAKE_SYSTEM_VERSION}" STREQUAL "LinuxStandardBase") + # Cross-compilation necessarily implies standalone and static build + SET(STATIC_BUILD ON) + SET(STANDALONE_BUILD ON) +endif() + +if (CMAKE_COMPILER_IS_GNUCXX) + set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -Wall -Wno-long-long") + + # --std=c99 makes libcurl not to compile + # -pedantic gives a lot of warnings on OpenSSL + set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -Wall -Wno-long-long -Wno-variadic-macros") + + if (CMAKE_CROSSCOMPILING) + # http://stackoverflow.com/a/3543845/881731 + set(CMAKE_RC_COMPILE_OBJECT "<CMAKE_RC_COMPILER> -O coff -I<CMAKE_CURRENT_SOURCE_DIR> <SOURCE> <OBJECT>") + endif() + +elseif (MSVC) + # Use static runtime under Visual Studio + # http://www.cmake.org/Wiki/CMake_FAQ#Dynamic_Replace + # http://stackoverflow.com/a/6510446 + foreach(flag_var + CMAKE_C_FLAGS_DEBUG + CMAKE_CXX_FLAGS_DEBUG + CMAKE_C_FLAGS_RELEASE + CMAKE_CXX_FLAGS_RELEASE + CMAKE_C_FLAGS_MINSIZEREL + CMAKE_CXX_FLAGS_MINSIZEREL + CMAKE_C_FLAGS_RELWITHDEBINFO + CMAKE_CXX_FLAGS_RELWITHDEBINFO) + string(REGEX REPLACE "/MD" "/MT" ${flag_var} "${${flag_var}}") + string(REGEX REPLACE "/MDd" "/MTd" ${flag_var} "${${flag_var}}") + endforeach(flag_var) + + # Add /Zm256 compiler option to Visual Studio to fix PCH errors + set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} /Zm256") + + add_definitions( + -D_CRT_SECURE_NO_WARNINGS=1 + -D_CRT_SECURE_NO_DEPRECATE=1 + ) + + if (MSVC_VERSION LESS 1600) + # Starting with Visual Studio >= 2010 (i.e. macro _MSC_VER >= + # 1600), Microsoft ships a standard-compliant <stdint.h> + # header. For earlier versions of Visual Studio, give access to a + # compatibility header. + # http://stackoverflow.com/a/70630/881731 + # https://en.wikibooks.org/wiki/C_Programming/C_Reference/stdint.h#External_links + include_directories(${ORTHANC_ROOT}/Resources/ThirdParty/VisualStudio) + endif() + + link_libraries(netapi32) +endif() + + +if (${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD" OR + ${CMAKE_SYSTEM_NAME} STREQUAL "OpenBSD") + # In FreeBSD/OpenBSD, the "/usr/local/" folder contains the ports and need to be imported + SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -I/usr/local/include") + SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -I/usr/local/include") + SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -L/usr/local/lib") + SET(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -L/usr/local/lib") +endif() + + +if (${CMAKE_SYSTEM_NAME} STREQUAL "Linux" OR + ${CMAKE_SYSTEM_NAME} STREQUAL "kFreeBSD" OR + ${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD" OR + ${CMAKE_SYSTEM_NAME} STREQUAL "OpenBSD") + + if (NOT ${CMAKE_SYSTEM_NAME} STREQUAL "OpenBSD") + # The "--no-undefined" linker flag makes the shared libraries + # (plugins ModalityWorklists and ServeFolders) fail to compile on OpenBSD + set(CMAKE_MODULE_LINKER_FLAGS "${CMAKE_MODULE_LINKER_FLAGS} -Wl,--no-undefined") + set(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -Wl,--no-undefined") + endif() + + if (NOT DEFINED ENABLE_PLUGINS_VERSION_SCRIPT OR + ENABLE_PLUGINS_VERSION_SCRIPT) + set(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -Wl,--version-script=${ORTHANC_ROOT}/Plugins/Samples/Common/VersionScript.map") + endif() + + # Remove the "-rdynamic" option + # http://www.mail-archive.com/cmake@cmake.org/msg08837.html + set(CMAKE_SHARED_LIBRARY_LINK_CXX_FLAGS "") + link_libraries(pthread) + + if (NOT ${CMAKE_SYSTEM_NAME} STREQUAL "OpenBSD") + link_libraries(rt) + endif() + + if (NOT ${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD" AND + NOT ${CMAKE_SYSTEM_NAME} STREQUAL "OpenBSD") + link_libraries(dl) + endif() + + if (NOT ${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD" AND + NOT ${CMAKE_SYSTEM_NAME} STREQUAL "OpenBSD") + # The "--as-needed" linker flag is not available on FreeBSD and OpenBSD + set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -Wl,--as-needed") + set(CMAKE_MODULE_LINKER_FLAGS "${CMAKE_MODULE_LINKER_FLAGS} -Wl,--as-needed") + set(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -Wl,--as-needed") + endif() + + if (NOT ${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD" AND + NOT ${CMAKE_SYSTEM_NAME} STREQUAL "OpenBSD") + # FreeBSD/OpenBSD have just one single interface for file + # handling, which is 64bit clean, so there is no need to define macro + # for LFS (Large File Support). + # https://ohse.de/uwe/articles/lfs.html + add_definitions( + -D_LARGEFILE64_SOURCE=1 + -D_FILE_OFFSET_BITS=64 + ) + endif() + +elseif(${CMAKE_SYSTEM_NAME} STREQUAL "Windows") + if (MSVC) + message("MSVC compiler version = " ${MSVC_VERSION} "\n") + # Starting Visual Studio 2013 (version 1800), it is not possible + # to target Windows XP anymore + if (MSVC_VERSION LESS 1800) + add_definitions( + -DWINVER=0x0501 + -D_WIN32_WINNT=0x0501 + ) + endif() + else() + add_definitions( + -DWINVER=0x0501 + -D_WIN32_WINNT=0x0501 + ) + endif() + + add_definitions( + -D_CRT_SECURE_NO_WARNINGS=1 + ) + link_libraries(rpcrt4 ws2_32) + + if (CMAKE_COMPILER_IS_GNUCXX) + # Some additional C/C++ compiler flags for MinGW + SET(MINGW_NO_WARNINGS "-Wno-unused-function -Wno-unused-variable") + SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${MINGW_NO_WARNINGS} -Wno-pointer-to-int-cast -Wno-int-to-pointer-cast") + SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${MINGW_NO_WARNINGS}") + + # This is a patch for MinGW64 + SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -Wl,--allow-multiple-definition -static-libgcc -static-libstdc++") + SET(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -Wl,--allow-multiple-definition -static-libgcc -static-libstdc++") + + CHECK_LIBRARY_EXISTS(winpthread pthread_create "" HAVE_WIN_PTHREAD) + if (HAVE_WIN_PTHREAD) + # This line is necessary to compile with recent versions of MinGW, + # otherwise "libwinpthread-1.dll" is not statically linked. + SET(CMAKE_CXX_STANDARD_LIBRARIES "${CMAKE_CXX_STANDARD_LIBRARIES} -Wl,-Bstatic -lstdc++ -lpthread -Wl,-Bdynamic") + add_definitions(-DHAVE_WIN_PTHREAD=1) + else() + add_definitions(-DHAVE_WIN_PTHREAD=0) + endif() + endif() + +elseif (${CMAKE_SYSTEM_NAME} STREQUAL "Darwin") + SET(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -exported_symbols_list ${ORTHANC_ROOT}/Plugins/Samples/Common/ExportedSymbols.list") + + add_definitions( + -D_XOPEN_SOURCE=1 + ) + link_libraries(iconv) + +elseif (CMAKE_SYSTEM_NAME STREQUAL "Emscripten") + message("Building using Emscripten (for WebAssembly or asm.js targets)") + +else() + message(FATAL_ERROR "Support your platform here") +endif() + + +if (DEFINED ENABLE_PROFILING AND ENABLE_PROFILING) + if (CMAKE_COMPILER_IS_GNUCXX) + set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -pg") + set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -pg") + set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -pg") + set(CMAKE_MODULE_LINKER_FLAGS "${CMAKE_MODULE_LINKER_FLAGS} -pg") + set(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} -pg") + else() + message(FATAL_ERROR "Don't know how to enable profiling on your configuration") + endif() +endif() + + +if (CMAKE_COMPILER_IS_GNUCXX) + # "When creating a static library using binutils (ar) and there + # exist a duplicate object name (e.g. a/Foo.cpp.o, b/Foo.cpp.o), the + # resulting static library can end up having only one of the + # duplicate objects. [...] This bug only happens if there are many + # objects." The trick consists in replacing the "r" argument + # ("replace") provided to "ar" (as used in CMake < 3.1) by the "q" + # argument ("quick append"). This is because of the fact that CMake + # will invoke "ar" several times with several batches of ".o" + # objects, and using "r" would overwrite symbols defined in + # preceding batches. https://cmake.org/Bug/view.php?id=14874 + set(CMAKE_CXX_ARCHIVE_APPEND "<CMAKE_AR> <LINK_FLAGS> q <TARGET> <OBJECTS>") +endif() + + +if (STATIC_BUILD) + add_definitions(-DORTHANC_STATIC=1) +else() + add_definitions(-DORTHANC_STATIC=0) +endif()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/DownloadPackage.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,172 @@ +macro(GetUrlFilename TargetVariable Url) + string(REGEX REPLACE "^.*/" "" ${TargetVariable} "${Url}") +endmacro() + + +macro(GetUrlExtension TargetVariable Url) + #string(REGEX REPLACE "^.*/[^.]*\\." "" TMP "${Url}") + string(REGEX REPLACE "^.*\\." "" TMP "${Url}") + string(TOLOWER "${TMP}" "${TargetVariable}") +endmacro() + + + +## +## Setup the patch command-line tool +## + +if (NOT ORTHANC_DISABLE_PATCH) + if ("${CMAKE_HOST_SYSTEM_NAME}" STREQUAL "Windows") + set(PATCH_EXECUTABLE ${CMAKE_CURRENT_LIST_DIR}/../ThirdParty/patch/patch.exe) + if (NOT EXISTS ${PATCH_EXECUTABLE}) + message(FATAL_ERROR "Unable to find the patch.exe tool that is shipped with Orthanc") + endif() + + else () + find_program(PATCH_EXECUTABLE patch) + if (${PATCH_EXECUTABLE} MATCHES "PATCH_EXECUTABLE-NOTFOUND") + message(FATAL_ERROR "Please install the 'patch' standard command-line tool") + endif() + endif() +endif() + + + +## +## Check the existence of the required decompression tools +## + +if ("${CMAKE_HOST_SYSTEM_NAME}" STREQUAL "Windows") + find_program(ZIP_EXECUTABLE 7z + PATHS + "$ENV{ProgramFiles}/7-Zip" + "$ENV{ProgramW6432}/7-Zip" + ) + + if (${ZIP_EXECUTABLE} MATCHES "ZIP_EXECUTABLE-NOTFOUND") + message(FATAL_ERROR "Please install the '7-zip' software (http://www.7-zip.org/)") + endif() + +else() + find_program(UNZIP_EXECUTABLE unzip) + if (${UNZIP_EXECUTABLE} MATCHES "UNZIP_EXECUTABLE-NOTFOUND") + message(FATAL_ERROR "Please install the 'unzip' package") + endif() + + find_program(TAR_EXECUTABLE tar) + if (${TAR_EXECUTABLE} MATCHES "TAR_EXECUTABLE-NOTFOUND") + message(FATAL_ERROR "Please install the 'tar' package") + endif() +endif() + + +macro(DownloadPackage MD5 Url TargetDirectory) + if (NOT IS_DIRECTORY "${TargetDirectory}") + GetUrlFilename(TMP_FILENAME "${Url}") + + set(TMP_PATH "${CMAKE_SOURCE_DIR}/ThirdPartyDownloads/${TMP_FILENAME}") + if (NOT EXISTS "${TMP_PATH}") + message("Downloading ${Url}") + + # This fixes issue 6: "I think cmake shouldn't download the + # packages which are not in the system, it should stop and let + # user know." + # https://code.google.com/p/orthanc/issues/detail?id=6 + if (NOT STATIC_BUILD AND NOT ALLOW_DOWNLOADS) + message(FATAL_ERROR "CMake is not allowed to download from Internet. Please set the ALLOW_DOWNLOADS option to ON") + endif() + + file(DOWNLOAD "${Url}" "${TMP_PATH}" + SHOW_PROGRESS EXPECTED_MD5 "${MD5}" + TIMEOUT 60 INACTIVITY_TIMEOUT 60) + else() + message("Using local copy of ${Url}") + endif() + + GetUrlExtension(TMP_EXTENSION "${Url}") + #message(${TMP_EXTENSION}) + message("Uncompressing ${TMP_FILENAME}") + + if ("${CMAKE_HOST_SYSTEM_NAME}" STREQUAL "Windows") + # How to silently extract files using 7-zip + # http://superuser.com/questions/331148/7zip-command-line-extract-silently-quietly + + if (("${TMP_EXTENSION}" STREQUAL "gz") OR + ("${TMP_EXTENSION}" STREQUAL "tgz") OR + ("${TMP_EXTENSION}" STREQUAL "xz")) + execute_process( + COMMAND ${ZIP_EXECUTABLE} e -y ${TMP_PATH} + WORKING_DIRECTORY ${CMAKE_BINARY_DIR} + RESULT_VARIABLE Failure + OUTPUT_QUIET + ) + + if (Failure) + message(FATAL_ERROR "Error while running the uncompression tool") + endif() + + if ("${TMP_EXTENSION}" STREQUAL "tgz") + string(REGEX REPLACE ".tgz$" ".tar" TMP_FILENAME2 "${TMP_FILENAME}") + elseif ("${TMP_EXTENSION}" STREQUAL "gz") + string(REGEX REPLACE ".gz$" "" TMP_FILENAME2 "${TMP_FILENAME}") + elseif ("${TMP_EXTENSION}" STREQUAL "xz") + string(REGEX REPLACE ".xz" "" TMP_FILENAME2 "${TMP_FILENAME}") + endif() + + execute_process( + COMMAND ${ZIP_EXECUTABLE} x -y ${TMP_FILENAME2} + WORKING_DIRECTORY ${CMAKE_BINARY_DIR} + RESULT_VARIABLE Failure + OUTPUT_QUIET + ) + elseif ("${TMP_EXTENSION}" STREQUAL "zip") + execute_process( + COMMAND ${ZIP_EXECUTABLE} x -y ${TMP_PATH} + WORKING_DIRECTORY ${CMAKE_BINARY_DIR} + RESULT_VARIABLE Failure + OUTPUT_QUIET + ) + else() + message(FATAL_ERROR "Support your platform here") + endif() + + else() + if ("${TMP_EXTENSION}" STREQUAL "zip") + execute_process( + COMMAND sh -c "${UNZIP_EXECUTABLE} -q ${TMP_PATH}" + WORKING_DIRECTORY ${CMAKE_BINARY_DIR} + RESULT_VARIABLE Failure + ) + elseif (("${TMP_EXTENSION}" STREQUAL "gz") OR ("${TMP_EXTENSION}" STREQUAL "tgz")) + #message("tar xvfz ${TMP_PATH}") + execute_process( + COMMAND sh -c "${TAR_EXECUTABLE} xfz ${TMP_PATH}" + WORKING_DIRECTORY ${CMAKE_BINARY_DIR} + RESULT_VARIABLE Failure + ) + elseif ("${TMP_EXTENSION}" STREQUAL "bz2") + execute_process( + COMMAND sh -c "${TAR_EXECUTABLE} xfj ${TMP_PATH}" + WORKING_DIRECTORY ${CMAKE_BINARY_DIR} + RESULT_VARIABLE Failure + ) + elseif ("${TMP_EXTENSION}" STREQUAL "xz") + execute_process( + COMMAND sh -c "${TAR_EXECUTABLE} xf ${TMP_PATH}" + WORKING_DIRECTORY ${CMAKE_BINARY_DIR} + RESULT_VARIABLE Failure + ) + else() + message(FATAL_ERROR "Unknown package format.") + endif() + endif() + + if (Failure) + message(FATAL_ERROR "Error while running the uncompression tool") + endif() + + if (NOT IS_DIRECTORY "${TargetDirectory}") + message(FATAL_ERROR "The package was not uncompressed at the proper location. Check the CMake instructions.") + endif() + endif() +endmacro()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/GoogleTestConfiguration.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,68 @@ +if (USE_GOOGLE_TEST_DEBIAN_PACKAGE) + find_path(GOOGLE_TEST_DEBIAN_SOURCES_DIR + NAMES src/gtest-all.cc + PATHS + /usr/src/gtest + /usr/src/googletest/googletest + PATH_SUFFIXES src + ) + + find_path(GOOGLE_TEST_DEBIAN_INCLUDE_DIR + NAMES gtest.h + PATHS + /usr/include/gtest + ) + + message("Path to the Debian Google Test sources: ${GOOGLE_TEST_DEBIAN_SOURCES_DIR}") + message("Path to the Debian Google Test includes: ${GOOGLE_TEST_DEBIAN_INCLUDE_DIR}") + + set(GOOGLE_TEST_SOURCES + ${GOOGLE_TEST_DEBIAN_SOURCES_DIR}/src/gtest-all.cc + ) + + include_directories(${GOOGLE_TEST_DEBIAN_SOURCES_DIR}) + + if (NOT EXISTS ${GOOGLE_TEST_SOURCES} OR + NOT EXISTS ${GOOGLE_TEST_DEBIAN_INCLUDE_DIR}/gtest.h) + message(FATAL_ERROR "Please install the libgtest-dev package") + endif() + +elseif (STATIC_BUILD OR NOT USE_SYSTEM_GOOGLE_TEST) + set(GOOGLE_TEST_SOURCES_DIR ${CMAKE_BINARY_DIR}/gtest-1.7.0) + set(GOOGLE_TEST_URL "http://www.orthanc-server.com/downloads/third-party/gtest-1.7.0.zip") + set(GOOGLE_TEST_MD5 "2d6ec8ccdf5c46b05ba54a9fd1d130d7") + + DownloadPackage(${GOOGLE_TEST_MD5} ${GOOGLE_TEST_URL} "${GOOGLE_TEST_SOURCES_DIR}") + + include_directories( + ${GOOGLE_TEST_SOURCES_DIR}/include + ${GOOGLE_TEST_SOURCES_DIR} + ) + + set(GOOGLE_TEST_SOURCES + ${GOOGLE_TEST_SOURCES_DIR}/src/gtest-all.cc + ) + + # https://code.google.com/p/googletest/issues/detail?id=412 + if (MSVC) # VS2012 does not support tuples correctly yet + add_definitions(/D _VARIADIC_MAX=10) + endif() + + if ("${CMAKE_SYSTEM_VERSION}" STREQUAL "LinuxStandardBase") + add_definitions(-DGTEST_HAS_CLONE=0) + endif() + + source_group(ThirdParty\\GoogleTest REGULAR_EXPRESSION ${GOOGLE_TEST_SOURCES_DIR}/.*) + +else() + include(FindGTest) + if (NOT GTEST_FOUND) + message(FATAL_ERROR "Unable to find GoogleTest") + endif() + + include_directories(${GTEST_INCLUDE_DIRS}) + + # The variable GTEST_LIBRARIES contains the shared library of + # Google Test, create an alias for more uniformity + set(GOOGLE_TEST_LIBRARIES ${GTEST_LIBRARIES}) +endif()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/JsonCppConfiguration.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,82 @@ +set(JSONCPP_CXX11 OFF) + +if (STATIC_BUILD OR NOT USE_SYSTEM_JSONCPP) + if (USE_LEGACY_JSONCPP) + set(JSONCPP_SOURCES_DIR ${CMAKE_BINARY_DIR}/jsoncpp-0.10.6) + set(JSONCPP_URL "http://www.orthanc-server.com/downloads/third-party/jsoncpp-0.10.6.tar.gz") + set(JSONCPP_MD5 "13d1991d79697df8cadbc25c93e37c83") + add_definitions(-DORTHANC_LEGACY_JSONCPP=1) + else() + set(JSONCPP_SOURCES_DIR ${CMAKE_BINARY_DIR}/jsoncpp-1.8.4) + set(JSONCPP_URL "http://www.orthanc-server.com/downloads/third-party/jsoncpp-1.8.4.tar.gz") + set(JSONCPP_MD5 "fa47a3ab6b381869b6a5f20811198662") + add_definitions(-DORTHANC_LEGACY_JSONCPP=0) + set(JSONCPP_CXX11 ON) + endif() + + DownloadPackage(${JSONCPP_MD5} ${JSONCPP_URL} "${JSONCPP_SOURCES_DIR}") + + set(JSONCPP_SOURCES + ${JSONCPP_SOURCES_DIR}/src/lib_json/json_reader.cpp + ${JSONCPP_SOURCES_DIR}/src/lib_json/json_value.cpp + ${JSONCPP_SOURCES_DIR}/src/lib_json/json_writer.cpp + ) + + include_directories( + ${JSONCPP_SOURCES_DIR}/include + ) + + source_group(ThirdParty\\JsonCpp REGULAR_EXPRESSION ${JSONCPP_SOURCES_DIR}/.*) + +else() + find_path(JSONCPP_INCLUDE_DIR json/reader.h + /usr/include/jsoncpp + /usr/local/include/jsoncpp + ) + + message("JsonCpp include dir: ${JSONCPP_INCLUDE_DIR}") + include_directories(${JSONCPP_INCLUDE_DIR}) + link_libraries(jsoncpp) + + CHECK_INCLUDE_FILE_CXX(${JSONCPP_INCLUDE_DIR}/json/reader.h HAVE_JSONCPP_H) + if (NOT HAVE_JSONCPP_H) + message(FATAL_ERROR "Please install the libjsoncpp-dev package") + endif() + + # Switch to the C++11 standard if the version of JsonCpp is 1.y.z + if (EXISTS ${JSONCPP_INCLUDE_DIR}/json/version.h) + file(STRINGS + "${JSONCPP_INCLUDE_DIR}/json/version.h" + JSONCPP_VERSION_MAJOR1 REGEX + ".*define JSONCPP_VERSION_MAJOR.*") + + if (NOT JSONCPP_VERSION_MAJOR1) + message(FATAL_ERROR "Unable to extract the major version of JsonCpp") + endif() + + string(REGEX REPLACE + ".*JSONCPP_VERSION_MAJOR.*([0-9]+)$" "\\1" + JSONCPP_VERSION_MAJOR ${JSONCPP_VERSION_MAJOR1}) + message("JsonCpp major version: ${JSONCPP_VERSION_MAJOR}") + + if (JSONCPP_VERSION_MAJOR GREATER 0) + set(JSONCPP_CXX11 ON) + endif() + else() + message("Unable to detect the major version of JsonCpp, assuming < 1.0.0") + endif() +endif() + + +if (JSONCPP_CXX11) + # Osimis has encountered problems when this macro is left at its + # default value (1000), so we increase this limit + # https://gitlab.kitware.com/third-party/jsoncpp/commit/56df2068470241f9043b676bfae415ed62a0c172 + add_definitions(-DJSONCPP_DEPRECATED_STACK_LIMIT=5000) + + if (CMAKE_COMPILER_IS_GNUCXX OR + "${CMAKE_CXX_COMPILER_ID}" STREQUAL "Clang") + message("Switching to C++11 standard in gcc/clang, as version of JsonCpp is >= 1.0.0") + set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -std=c++11 -Wno-deprecated-declarations") + endif() +endif()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/LibCurlConfiguration.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,323 @@ +if (STATIC_BUILD OR NOT USE_SYSTEM_CURL) + SET(CURL_SOURCES_DIR ${CMAKE_BINARY_DIR}/curl-7.57.0) + SET(CURL_URL "http://www.orthanc-server.com/downloads/third-party/curl-7.57.0.tar.gz") + SET(CURL_MD5 "c7aab73aaf5e883ca1d7518f93649dc2") + + if (IS_DIRECTORY "${CURL_SOURCES_DIR}") + set(FirstRun OFF) + else() + set(FirstRun ON) + endif() + + DownloadPackage(${CURL_MD5} ${CURL_URL} "${CURL_SOURCES_DIR}") + + if (FirstRun) + execute_process( + COMMAND ${PATCH_EXECUTABLE} -p0 -N -i + ${ORTHANC_ROOT}/Resources/Patches/curl-7.57.0-cmake.patch + WORKING_DIRECTORY ${CMAKE_BINARY_DIR} + RESULT_VARIABLE Failure + ) + + if (Failure) + message(FATAL_ERROR "Error while patching a file") + endif() + endif() + + include_directories( + ${CURL_SOURCES_DIR}/include + ) + + AUX_SOURCE_DIRECTORY(${CURL_SOURCES_DIR}/lib CURL_SOURCES) + AUX_SOURCE_DIRECTORY(${CURL_SOURCES_DIR}/lib/vauth CURL_SOURCES) + AUX_SOURCE_DIRECTORY(${CURL_SOURCES_DIR}/lib/vtls CURL_SOURCES) + source_group(ThirdParty\\LibCurl REGULAR_EXPRESSION ${CURL_SOURCES_DIR}/.*) + + add_definitions( + -DBUILDING_LIBCURL=1 + -DCURL_STATICLIB=1 + -DCURL_DISABLE_LDAPS=1 + -DCURL_DISABLE_LDAP=1 + -DCURL_DISABLE_DICT=1 + -DCURL_DISABLE_FILE=1 + -DCURL_DISABLE_FTP=1 + -DCURL_DISABLE_GOPHER=1 + -DCURL_DISABLE_LDAP=1 + -DCURL_DISABLE_LDAPS=1 + -DCURL_DISABLE_POP3=1 + #-DCURL_DISABLE_PROXY=1 + -DCURL_DISABLE_RTSP=1 + -DCURL_DISABLE_TELNET=1 + -DCURL_DISABLE_TFTP=1 + ) + + if (ENABLE_SSL) + add_definitions( + #-DHAVE_LIBSSL=1 + -DUSE_OPENSSL=1 + -DHAVE_OPENSSL_ENGINE_H=1 + -DUSE_SSLEAY=1 + ) + endif() + + if (NOT EXISTS "${CURL_SOURCES_DIR}/lib/curl_config.h") + #file(WRITE ${CURL_SOURCES_DIR}/lib/curl_config.h "") + + file(WRITE ${CURL_SOURCES_DIR}/lib/vauth/vauth/vauth.h "#include \"../vauth.h\"\n") + file(WRITE ${CURL_SOURCES_DIR}/lib/vauth/vauth/digest.h "#include \"../digest.h\"\n") + file(WRITE ${CURL_SOURCES_DIR}/lib/vauth/vauth/ntlm.h "#include \"../ntlm.h\"\n") + file(WRITE ${CURL_SOURCES_DIR}/lib/vauth/vtls/vtls.h "#include \"../../vtls/vtls.h\"\n") + + file(GLOB CURL_LIBS_HEADERS ${CURL_SOURCES_DIR}/lib/*.h) + foreach (header IN LISTS CURL_LIBS_HEADERS) + get_filename_component(filename ${header} NAME) + file(WRITE ${CURL_SOURCES_DIR}/lib/vauth/${filename} "#include \"../${filename}\"\n") + file(WRITE ${CURL_SOURCES_DIR}/lib/vtls/${filename} "#include \"../${filename}\"\n") + endforeach() + endif() + + if (${CMAKE_SYSTEM_NAME} STREQUAL "Linux" OR + ${CMAKE_SYSTEM_NAME} STREQUAL "Darwin" OR + ${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD" OR + ${CMAKE_SYSTEM_NAME} STREQUAL "kFreeBSD" OR + ${CMAKE_SYSTEM_NAME} STREQUAL "OpenBSD") + if ("${CMAKE_SIZEOF_VOID_P}" EQUAL "8") + SET(TMP_OS "x86_64") + else() + SET(TMP_OS "x86") + endif() + + set_property( + SOURCE ${CURL_SOURCES} + PROPERTY COMPILE_DEFINITIONS "HAVE_CONFIG_H=1;OS=\"${TMP_OS}\"" + ) + + include(${CURL_SOURCES_DIR}/CMake/Macros.cmake) + + # WARNING: Do *not* reorder the "check_include_file_concat()" below! + check_include_file_concat("stdio.h" HAVE_STDIO_H) + check_include_file_concat("inttypes.h" HAVE_INTTYPES_H) + check_include_file_concat("sys/filio.h" HAVE_SYS_FILIO_H) + check_include_file_concat("sys/ioctl.h" HAVE_SYS_IOCTL_H) + check_include_file_concat("sys/param.h" HAVE_SYS_PARAM_H) + check_include_file_concat("sys/poll.h" HAVE_SYS_POLL_H) + check_include_file_concat("sys/resource.h" HAVE_SYS_RESOURCE_H) + check_include_file_concat("sys/select.h" HAVE_SYS_SELECT_H) + check_include_file_concat("sys/socket.h" HAVE_SYS_SOCKET_H) + check_include_file_concat("sys/sockio.h" HAVE_SYS_SOCKIO_H) + check_include_file_concat("sys/stat.h" HAVE_SYS_STAT_H) + check_include_file_concat("sys/time.h" HAVE_SYS_TIME_H) + check_include_file_concat("sys/types.h" HAVE_SYS_TYPES_H) + check_include_file_concat("sys/uio.h" HAVE_SYS_UIO_H) + check_include_file_concat("sys/un.h" HAVE_SYS_UN_H) + check_include_file_concat("sys/utime.h" HAVE_SYS_UTIME_H) + check_include_file_concat("sys/xattr.h" HAVE_SYS_XATTR_H) + check_include_file_concat("alloca.h" HAVE_ALLOCA_H) + check_include_file_concat("arpa/inet.h" HAVE_ARPA_INET_H) + check_include_file_concat("arpa/tftp.h" HAVE_ARPA_TFTP_H) + check_include_file_concat("assert.h" HAVE_ASSERT_H) + check_include_file_concat("crypto.h" HAVE_CRYPTO_H) + check_include_file_concat("des.h" HAVE_DES_H) + check_include_file_concat("err.h" HAVE_ERR_H) + check_include_file_concat("errno.h" HAVE_ERRNO_H) + check_include_file_concat("fcntl.h" HAVE_FCNTL_H) + check_include_file_concat("idn2.h" HAVE_IDN2_H) + check_include_file_concat("ifaddrs.h" HAVE_IFADDRS_H) + check_include_file_concat("io.h" HAVE_IO_H) + check_include_file_concat("krb.h" HAVE_KRB_H) + check_include_file_concat("libgen.h" HAVE_LIBGEN_H) + check_include_file_concat("limits.h" HAVE_LIMITS_H) + check_include_file_concat("locale.h" HAVE_LOCALE_H) + check_include_file_concat("net/if.h" HAVE_NET_IF_H) + check_include_file_concat("netdb.h" HAVE_NETDB_H) + check_include_file_concat("netinet/in.h" HAVE_NETINET_IN_H) + check_include_file_concat("netinet/tcp.h" HAVE_NETINET_TCP_H) + + check_include_file_concat("pem.h" HAVE_PEM_H) + check_include_file_concat("poll.h" HAVE_POLL_H) + check_include_file_concat("pwd.h" HAVE_PWD_H) + check_include_file_concat("rsa.h" HAVE_RSA_H) + check_include_file_concat("setjmp.h" HAVE_SETJMP_H) + check_include_file_concat("sgtty.h" HAVE_SGTTY_H) + check_include_file_concat("signal.h" HAVE_SIGNAL_H) + check_include_file_concat("ssl.h" HAVE_SSL_H) + check_include_file_concat("stdbool.h" HAVE_STDBOOL_H) + check_include_file_concat("stdint.h" HAVE_STDINT_H) + check_include_file_concat("stdio.h" HAVE_STDIO_H) + check_include_file_concat("stdlib.h" HAVE_STDLIB_H) + check_include_file_concat("string.h" HAVE_STRING_H) + check_include_file_concat("strings.h" HAVE_STRINGS_H) + check_include_file_concat("stropts.h" HAVE_STROPTS_H) + check_include_file_concat("termio.h" HAVE_TERMIO_H) + check_include_file_concat("termios.h" HAVE_TERMIOS_H) + check_include_file_concat("time.h" HAVE_TIME_H) + check_include_file_concat("unistd.h" HAVE_UNISTD_H) + check_include_file_concat("utime.h" HAVE_UTIME_H) + check_include_file_concat("x509.h" HAVE_X509_H) + + check_include_file_concat("process.h" HAVE_PROCESS_H) + check_include_file_concat("stddef.h" HAVE_STDDEF_H) + check_include_file_concat("dlfcn.h" HAVE_DLFCN_H) + check_include_file_concat("malloc.h" HAVE_MALLOC_H) + check_include_file_concat("memory.h" HAVE_MEMORY_H) + check_include_file_concat("netinet/if_ether.h" HAVE_NETINET_IF_ETHER_H) + check_include_file_concat("stdint.h" HAVE_STDINT_H) + check_include_file_concat("sockio.h" HAVE_SOCKIO_H) + check_include_file_concat("sys/utsname.h" HAVE_SYS_UTSNAME_H) + + check_type_size("size_t" SIZEOF_SIZE_T) + check_type_size("ssize_t" SIZEOF_SSIZE_T) + check_type_size("long long" SIZEOF_LONG_LONG) + check_type_size("long" SIZEOF_LONG) + check_type_size("short" SIZEOF_SHORT) + check_type_size("int" SIZEOF_INT) + check_type_size("__int64" SIZEOF___INT64) + check_type_size("long double" SIZEOF_LONG_DOUBLE) + check_type_size("time_t" SIZEOF_TIME_T) + check_type_size("off_t" SIZEOF_OFF_T) + check_type_size("socklen_t" CURL_SIZEOF_CURL_SOCKLEN_T) + + check_symbol_exists(basename "${CURL_INCLUDES}" HAVE_BASENAME) + check_symbol_exists(socket "${CURL_INCLUDES}" HAVE_SOCKET) + # poll on macOS is unreliable, it first did not exist, then was broken until + # fixed in 10.9 only to break again in 10.12. + if(NOT APPLE) + check_symbol_exists(poll "${CURL_INCLUDES}" HAVE_POLL) + endif() + check_symbol_exists(select "${CURL_INCLUDES}" HAVE_SELECT) + check_symbol_exists(strdup "${CURL_INCLUDES}" HAVE_STRDUP) + check_symbol_exists(strstr "${CURL_INCLUDES}" HAVE_STRSTR) + check_symbol_exists(strtok_r "${CURL_INCLUDES}" HAVE_STRTOK_R) + check_symbol_exists(strftime "${CURL_INCLUDES}" HAVE_STRFTIME) + check_symbol_exists(uname "${CURL_INCLUDES}" HAVE_UNAME) + check_symbol_exists(strcasecmp "${CURL_INCLUDES}" HAVE_STRCASECMP) + check_symbol_exists(stricmp "${CURL_INCLUDES}" HAVE_STRICMP) + check_symbol_exists(strcmpi "${CURL_INCLUDES}" HAVE_STRCMPI) + check_symbol_exists(strncmpi "${CURL_INCLUDES}" HAVE_STRNCMPI) + check_symbol_exists(alarm "${CURL_INCLUDES}" HAVE_ALARM) + if(NOT HAVE_STRNCMPI) + set(HAVE_STRCMPI) + endif(NOT HAVE_STRNCMPI) + + check_symbol_exists(gethostbyaddr "${CURL_INCLUDES}" HAVE_GETHOSTBYADDR) + check_symbol_exists(gethostbyaddr_r "${CURL_INCLUDES}" HAVE_GETHOSTBYADDR_R) + check_symbol_exists(gettimeofday "${CURL_INCLUDES}" HAVE_GETTIMEOFDAY) + check_symbol_exists(inet_addr "${CURL_INCLUDES}" HAVE_INET_ADDR) + check_symbol_exists(inet_ntoa "${CURL_INCLUDES}" HAVE_INET_NTOA) + check_symbol_exists(inet_ntoa_r "${CURL_INCLUDES}" HAVE_INET_NTOA_R) + check_symbol_exists(tcsetattr "${CURL_INCLUDES}" HAVE_TCSETATTR) + check_symbol_exists(tcgetattr "${CURL_INCLUDES}" HAVE_TCGETATTR) + check_symbol_exists(perror "${CURL_INCLUDES}" HAVE_PERROR) + check_symbol_exists(closesocket "${CURL_INCLUDES}" HAVE_CLOSESOCKET) + check_symbol_exists(setvbuf "${CURL_INCLUDES}" HAVE_SETVBUF) + check_symbol_exists(sigsetjmp "${CURL_INCLUDES}" HAVE_SIGSETJMP) + check_symbol_exists(getpass_r "${CURL_INCLUDES}" HAVE_GETPASS_R) + check_symbol_exists(strlcat "${CURL_INCLUDES}" HAVE_STRLCAT) + check_symbol_exists(getpwuid "${CURL_INCLUDES}" HAVE_GETPWUID) + check_symbol_exists(geteuid "${CURL_INCLUDES}" HAVE_GETEUID) + check_symbol_exists(utime "${CURL_INCLUDES}" HAVE_UTIME) + check_symbol_exists(gmtime_r "${CURL_INCLUDES}" HAVE_GMTIME_R) + check_symbol_exists(localtime_r "${CURL_INCLUDES}" HAVE_LOCALTIME_R) + + check_symbol_exists(gethostbyname "${CURL_INCLUDES}" HAVE_GETHOSTBYNAME) + check_symbol_exists(gethostbyname_r "${CURL_INCLUDES}" HAVE_GETHOSTBYNAME_R) + + check_symbol_exists(signal "${CURL_INCLUDES}" HAVE_SIGNAL_FUNC) + check_symbol_exists(SIGALRM "${CURL_INCLUDES}" HAVE_SIGNAL_MACRO) + if(HAVE_SIGNAL_FUNC AND HAVE_SIGNAL_MACRO) + set(HAVE_SIGNAL 1) + endif(HAVE_SIGNAL_FUNC AND HAVE_SIGNAL_MACRO) + check_symbol_exists(uname "${CURL_INCLUDES}" HAVE_UNAME) + check_symbol_exists(strtoll "${CURL_INCLUDES}" HAVE_STRTOLL) + check_symbol_exists(_strtoi64 "${CURL_INCLUDES}" HAVE__STRTOI64) + check_symbol_exists(strerror_r "${CURL_INCLUDES}" HAVE_STRERROR_R) + check_symbol_exists(siginterrupt "${CURL_INCLUDES}" HAVE_SIGINTERRUPT) + check_symbol_exists(perror "${CURL_INCLUDES}" HAVE_PERROR) + check_symbol_exists(fork "${CURL_INCLUDES}" HAVE_FORK) + check_symbol_exists(getaddrinfo "${CURL_INCLUDES}" HAVE_GETADDRINFO) + check_symbol_exists(freeaddrinfo "${CURL_INCLUDES}" HAVE_FREEADDRINFO) + check_symbol_exists(freeifaddrs "${CURL_INCLUDES}" HAVE_FREEIFADDRS) + check_symbol_exists(pipe "${CURL_INCLUDES}" HAVE_PIPE) + check_symbol_exists(ftruncate "${CURL_INCLUDES}" HAVE_FTRUNCATE) + check_symbol_exists(getprotobyname "${CURL_INCLUDES}" HAVE_GETPROTOBYNAME) + check_symbol_exists(getrlimit "${CURL_INCLUDES}" HAVE_GETRLIMIT) + check_symbol_exists(setlocale "${CURL_INCLUDES}" HAVE_SETLOCALE) + check_symbol_exists(setmode "${CURL_INCLUDES}" HAVE_SETMODE) + check_symbol_exists(setrlimit "${CURL_INCLUDES}" HAVE_SETRLIMIT) + check_symbol_exists(fcntl "${CURL_INCLUDES}" HAVE_FCNTL) + check_symbol_exists(ioctl "${CURL_INCLUDES}" HAVE_IOCTL) + check_symbol_exists(setsockopt "${CURL_INCLUDES}" HAVE_SETSOCKOPT) + + if(HAVE_SIZEOF_LONG_LONG) + set(HAVE_LONGLONG 1) + set(HAVE_LL 1) + endif(HAVE_SIZEOF_LONG_LONG) + + check_function_exists(mach_absolute_time HAVE_MACH_ABSOLUTE_TIME) + check_function_exists(gethostname HAVE_GETHOSTNAME) + + check_include_file_concat("pthread.h" HAVE_PTHREAD_H) + check_symbol_exists(recv "sys/socket.h" HAVE_RECV) + check_symbol_exists(send "sys/socket.h" HAVE_SEND) + + check_struct_has_member("struct sockaddr_un" sun_path "sys/un.h" USE_UNIX_SOCKETS) + + set(CMAKE_REQUIRED_INCLUDES "${CURL_SOURCES_DIR}/include") + set(CMAKE_EXTRA_INCLUDE_FILES "curl/system.h") + check_type_size("curl_off_t" SIZEOF_CURL_OFF_T) + + add_definitions(-DHAVE_GLIBC_STRERROR_R=1) + + include(${CURL_SOURCES_DIR}/CMake/OtherTests.cmake) + + foreach(CURL_TEST + HAVE_FCNTL_O_NONBLOCK + HAVE_IOCTLSOCKET + HAVE_IOCTLSOCKET_CAMEL + HAVE_IOCTLSOCKET_CAMEL_FIONBIO + HAVE_IOCTLSOCKET_FIONBIO + HAVE_IOCTL_FIONBIO + HAVE_IOCTL_SIOCGIFADDR + HAVE_SETSOCKOPT_SO_NONBLOCK + HAVE_SOCKADDR_IN6_SIN6_SCOPE_ID + TIME_WITH_SYS_TIME + HAVE_O_NONBLOCK + HAVE_GETHOSTBYADDR_R_5 + HAVE_GETHOSTBYADDR_R_7 + HAVE_GETHOSTBYADDR_R_8 + HAVE_GETHOSTBYADDR_R_5_REENTRANT + HAVE_GETHOSTBYADDR_R_7_REENTRANT + HAVE_GETHOSTBYADDR_R_8_REENTRANT + HAVE_GETHOSTBYNAME_R_3 + HAVE_GETHOSTBYNAME_R_5 + HAVE_GETHOSTBYNAME_R_6 + HAVE_GETHOSTBYNAME_R_3_REENTRANT + HAVE_GETHOSTBYNAME_R_5_REENTRANT + HAVE_GETHOSTBYNAME_R_6_REENTRANT + HAVE_SOCKLEN_T + HAVE_IN_ADDR_T + HAVE_BOOL_T + STDC_HEADERS + RETSIGTYPE_TEST + HAVE_INET_NTOA_R_DECL + HAVE_INET_NTOA_R_DECL_REENTRANT + HAVE_GETADDRINFO + HAVE_FILE_OFFSET_BITS + ) + curl_internal_test(${CURL_TEST}) + endforeach(CURL_TEST) + + configure_file( + ${CURL_SOURCES_DIR}/lib/curl_config.h.cmake + ${CURL_SOURCES_DIR}/lib/curl_config.h + ) + endif() +else() + include(FindCURL) + include_directories(${CURL_INCLUDE_DIRS}) + link_libraries(${CURL_LIBRARIES}) + + if (NOT ${CURL_FOUND}) + message(FATAL_ERROR "Unable to find LibCurl") + endif() +endif()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/LibJpegConfiguration.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,95 @@ +if (STATIC_BUILD OR NOT USE_SYSTEM_LIBJPEG) + set(LIBJPEG_SOURCES_DIR ${CMAKE_BINARY_DIR}/jpeg-9a) + DownloadPackage( + "3353992aecaee1805ef4109aadd433e7" + "http://www.orthanc-server.com/downloads/third-party/jpegsrc.v9a.tar.gz" + "${LIBJPEG_SOURCES_DIR}") + + include_directories( + ${LIBJPEG_SOURCES_DIR} + ) + + list(APPEND LIBJPEG_SOURCES + ${LIBJPEG_SOURCES_DIR}/jaricom.c + ${LIBJPEG_SOURCES_DIR}/jcapimin.c + ${LIBJPEG_SOURCES_DIR}/jcapistd.c + ${LIBJPEG_SOURCES_DIR}/jcarith.c + ${LIBJPEG_SOURCES_DIR}/jccoefct.c + ${LIBJPEG_SOURCES_DIR}/jccolor.c + ${LIBJPEG_SOURCES_DIR}/jcdctmgr.c + ${LIBJPEG_SOURCES_DIR}/jchuff.c + ${LIBJPEG_SOURCES_DIR}/jcinit.c + ${LIBJPEG_SOURCES_DIR}/jcmarker.c + ${LIBJPEG_SOURCES_DIR}/jcmaster.c + ${LIBJPEG_SOURCES_DIR}/jcomapi.c + ${LIBJPEG_SOURCES_DIR}/jcparam.c + ${LIBJPEG_SOURCES_DIR}/jcprepct.c + ${LIBJPEG_SOURCES_DIR}/jcsample.c + ${LIBJPEG_SOURCES_DIR}/jctrans.c + ${LIBJPEG_SOURCES_DIR}/jdapimin.c + ${LIBJPEG_SOURCES_DIR}/jdapistd.c + ${LIBJPEG_SOURCES_DIR}/jdarith.c + ${LIBJPEG_SOURCES_DIR}/jdatadst.c + ${LIBJPEG_SOURCES_DIR}/jdatasrc.c + ${LIBJPEG_SOURCES_DIR}/jdcoefct.c + ${LIBJPEG_SOURCES_DIR}/jdcolor.c + ${LIBJPEG_SOURCES_DIR}/jddctmgr.c + ${LIBJPEG_SOURCES_DIR}/jdhuff.c + ${LIBJPEG_SOURCES_DIR}/jdinput.c + ${LIBJPEG_SOURCES_DIR}/jcmainct.c + ${LIBJPEG_SOURCES_DIR}/jdmainct.c + ${LIBJPEG_SOURCES_DIR}/jdmarker.c + ${LIBJPEG_SOURCES_DIR}/jdmaster.c + ${LIBJPEG_SOURCES_DIR}/jdmerge.c + ${LIBJPEG_SOURCES_DIR}/jdpostct.c + ${LIBJPEG_SOURCES_DIR}/jdsample.c + ${LIBJPEG_SOURCES_DIR}/jdtrans.c + ${LIBJPEG_SOURCES_DIR}/jerror.c + ${LIBJPEG_SOURCES_DIR}/jfdctflt.c + ${LIBJPEG_SOURCES_DIR}/jfdctfst.c + ${LIBJPEG_SOURCES_DIR}/jfdctint.c + ${LIBJPEG_SOURCES_DIR}/jidctflt.c + ${LIBJPEG_SOURCES_DIR}/jidctfst.c + ${LIBJPEG_SOURCES_DIR}/jidctint.c + #${LIBJPEG_SOURCES_DIR}/jmemansi.c + #${LIBJPEG_SOURCES_DIR}/jmemdos.c + #${LIBJPEG_SOURCES_DIR}/jmemmac.c + ${LIBJPEG_SOURCES_DIR}/jmemmgr.c + #${LIBJPEG_SOURCES_DIR}/jmemname.c + ${LIBJPEG_SOURCES_DIR}/jmemnobs.c + ${LIBJPEG_SOURCES_DIR}/jquant1.c + ${LIBJPEG_SOURCES_DIR}/jquant2.c + ${LIBJPEG_SOURCES_DIR}/jutils.c + + # ${LIBJPEG_SOURCES_DIR}/rdbmp.c + # ${LIBJPEG_SOURCES_DIR}/rdcolmap.c + # ${LIBJPEG_SOURCES_DIR}/rdgif.c + # ${LIBJPEG_SOURCES_DIR}/rdppm.c + # ${LIBJPEG_SOURCES_DIR}/rdrle.c + # ${LIBJPEG_SOURCES_DIR}/rdswitch.c + # ${LIBJPEG_SOURCES_DIR}/rdtarga.c + # ${LIBJPEG_SOURCES_DIR}/transupp.c + # ${LIBJPEG_SOURCES_DIR}/wrbmp.c + # ${LIBJPEG_SOURCES_DIR}/wrgif.c + # ${LIBJPEG_SOURCES_DIR}/wrppm.c + # ${LIBJPEG_SOURCES_DIR}/wrrle.c + # ${LIBJPEG_SOURCES_DIR}/wrtarga.c + ) + + configure_file( + ${LIBJPEG_SOURCES_DIR}/jconfig.txt + ${LIBJPEG_SOURCES_DIR}/jconfig.h COPYONLY + ) + + source_group(ThirdParty\\libjpeg REGULAR_EXPRESSION ${LIBJPEG_SOURCES_DIR}/.*) + +else() + include(FindJPEG) + + if (NOT ${JPEG_FOUND}) + message(FATAL_ERROR "Unable to find libjpeg") + endif() + + include_directories(${JPEG_INCLUDE_DIR}) + link_libraries(${JPEG_LIBRARIES}) +endif()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/LibPngConfiguration.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,61 @@ +if (STATIC_BUILD OR NOT USE_SYSTEM_LIBPNG) + SET(LIBPNG_SOURCES_DIR ${CMAKE_BINARY_DIR}/libpng-1.5.12) + SET(LIBPNG_URL "http://www.orthanc-server.com/downloads/third-party/libpng-1.5.12.tar.gz") + SET(LIBPNG_MD5 "8ea7f60347a306c5faf70b977fa80e28") + + DownloadPackage(${LIBPNG_MD5} ${LIBPNG_URL} "${LIBPNG_SOURCES_DIR}") + + include_directories( + ${LIBPNG_SOURCES_DIR} + ) + + configure_file( + ${LIBPNG_SOURCES_DIR}/scripts/pnglibconf.h.prebuilt + ${LIBPNG_SOURCES_DIR}/pnglibconf.h + ) + + set(LIBPNG_SOURCES + #${LIBPNG_SOURCES_DIR}/example.c + ${LIBPNG_SOURCES_DIR}/png.c + ${LIBPNG_SOURCES_DIR}/pngerror.c + ${LIBPNG_SOURCES_DIR}/pngget.c + ${LIBPNG_SOURCES_DIR}/pngmem.c + ${LIBPNG_SOURCES_DIR}/pngpread.c + ${LIBPNG_SOURCES_DIR}/pngread.c + ${LIBPNG_SOURCES_DIR}/pngrio.c + ${LIBPNG_SOURCES_DIR}/pngrtran.c + ${LIBPNG_SOURCES_DIR}/pngrutil.c + ${LIBPNG_SOURCES_DIR}/pngset.c + #${LIBPNG_SOURCES_DIR}/pngtest.c + ${LIBPNG_SOURCES_DIR}/pngtrans.c + ${LIBPNG_SOURCES_DIR}/pngwio.c + ${LIBPNG_SOURCES_DIR}/pngwrite.c + ${LIBPNG_SOURCES_DIR}/pngwtran.c + ${LIBPNG_SOURCES_DIR}/pngwutil.c + ) + + #set_property( + # SOURCE ${LIBPNG_SOURCES} + # PROPERTY COMPILE_FLAGS -UHAVE_CONFIG_H) + + add_definitions( + -DPNG_NO_CONSOLE_IO=1 + -DPNG_NO_STDIO=1 + # The following declaration avoids "__declspec(dllexport)" in + # libpng to prevent publicly exposing its symbols by the DLLs + -DPNG_IMPEXP= + ) + + source_group(ThirdParty\\libpng REGULAR_EXPRESSION ${LIBPNG_SOURCES_DIR}/.*) + +else() + include(FindPNG) + + if (NOT ${PNG_FOUND}) + message(FATAL_ERROR "Unable to find libpng") + endif() + + include_directories(${PNG_INCLUDE_DIRS}) + link_libraries(${PNG_LIBRARIES}) + add_definitions(${PNG_DEFINITIONS}) +endif()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/OpenSslConfiguration.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,219 @@ +if (STATIC_BUILD OR NOT USE_SYSTEM_OPENSSL) + # WARNING - We had to repack the upstream ".tar.gz" file to a ZIP + # file, as the upstream distribution ships symbolic links that are + # not always properly handled when uncompressing on Windows. + + SET(OPENSSL_SOURCES_DIR ${CMAKE_BINARY_DIR}/openssl-1.0.2d) + SET(OPENSSL_URL "http://www.orthanc-server.com/downloads/third-party/openssl-1.0.2d.zip") + SET(OPENSSL_MD5 "4b2ac15fc6db17f3dadc54482d3eee85") + + if (IS_DIRECTORY "${OPENSSL_SOURCES_DIR}") + set(FirstRun OFF) + else() + set(FirstRun ON) + endif() + + DownloadPackage(${OPENSSL_MD5} ${OPENSSL_URL} "${OPENSSL_SOURCES_DIR}") + + add_definitions( + -DOPENSSL_THREADS + -DOPENSSL_IA32_SSE2 + -DOPENSSL_NO_ASM + -DOPENSSL_NO_DYNAMIC_ENGINE + -DNO_WINDOWS_BRAINDEATH + + -DOPENSSL_NO_BF + -DOPENSSL_NO_CAMELLIA + -DOPENSSL_NO_CAST + -DOPENSSL_NO_EC_NISTP_64_GCC_128 + -DOPENSSL_NO_GMP + -DOPENSSL_NO_GOST + -DOPENSSL_NO_HW + -DOPENSSL_NO_JPAKE + -DOPENSSL_NO_IDEA + -DOPENSSL_NO_KRB5 + -DOPENSSL_NO_MD2 + -DOPENSSL_NO_MDC2 + -DOPENSSL_NO_MD4 + -DOPENSSL_NO_RC2 + -DOPENSSL_NO_RC4 + -DOPENSSL_NO_RC5 + -DOPENSSL_NO_RFC3779 + -DOPENSSL_NO_SCTP + -DOPENSSL_NO_STORE + -DOPENSSL_NO_SEED + -DOPENSSL_NO_WHIRLPOOL + -DOPENSSL_NO_RIPEMD + ) + + include_directories( + ${OPENSSL_SOURCES_DIR} + ${OPENSSL_SOURCES_DIR}/crypto + ${OPENSSL_SOURCES_DIR}/crypto/asn1 + ${OPENSSL_SOURCES_DIR}/crypto/modes + ${OPENSSL_SOURCES_DIR}/crypto/evp + ${OPENSSL_SOURCES_DIR}/include + ) + + set(OPENSSL_SOURCES_SUBDIRS + ${OPENSSL_SOURCES_DIR}/crypto + ${OPENSSL_SOURCES_DIR}/crypto/aes + ${OPENSSL_SOURCES_DIR}/crypto/asn1 + ${OPENSSL_SOURCES_DIR}/crypto/bio + ${OPENSSL_SOURCES_DIR}/crypto/bn + ${OPENSSL_SOURCES_DIR}/crypto/buffer + ${OPENSSL_SOURCES_DIR}/crypto/cmac + ${OPENSSL_SOURCES_DIR}/crypto/cms + ${OPENSSL_SOURCES_DIR}/crypto/comp + ${OPENSSL_SOURCES_DIR}/crypto/conf + ${OPENSSL_SOURCES_DIR}/crypto/des + ${OPENSSL_SOURCES_DIR}/crypto/dh + ${OPENSSL_SOURCES_DIR}/crypto/dsa + ${OPENSSL_SOURCES_DIR}/crypto/dso + ${OPENSSL_SOURCES_DIR}/crypto/engine + ${OPENSSL_SOURCES_DIR}/crypto/err + ${OPENSSL_SOURCES_DIR}/crypto/evp + ${OPENSSL_SOURCES_DIR}/crypto/hmac + ${OPENSSL_SOURCES_DIR}/crypto/lhash + ${OPENSSL_SOURCES_DIR}/crypto/md5 + ${OPENSSL_SOURCES_DIR}/crypto/modes + ${OPENSSL_SOURCES_DIR}/crypto/objects + ${OPENSSL_SOURCES_DIR}/crypto/ocsp + ${OPENSSL_SOURCES_DIR}/crypto/pem + ${OPENSSL_SOURCES_DIR}/crypto/pkcs12 + ${OPENSSL_SOURCES_DIR}/crypto/pkcs7 + ${OPENSSL_SOURCES_DIR}/crypto/pqueue + ${OPENSSL_SOURCES_DIR}/crypto/rand + ${OPENSSL_SOURCES_DIR}/crypto/rsa + ${OPENSSL_SOURCES_DIR}/crypto/sha + ${OPENSSL_SOURCES_DIR}/crypto/srp + ${OPENSSL_SOURCES_DIR}/crypto/stack + ${OPENSSL_SOURCES_DIR}/crypto/ts + ${OPENSSL_SOURCES_DIR}/crypto/txt_db + ${OPENSSL_SOURCES_DIR}/crypto/ui + ${OPENSSL_SOURCES_DIR}/crypto/x509 + ${OPENSSL_SOURCES_DIR}/crypto/x509v3 + ${OPENSSL_SOURCES_DIR}/ssl + ) + + if (ENABLE_PKCS11) + list(APPEND OPENSSL_SOURCES_SUBDIRS + # EC, ECDH and ECDSA are necessary for PKCS11 + ${OPENSSL_SOURCES_DIR}/crypto/ec + ${OPENSSL_SOURCES_DIR}/crypto/ecdh + ${OPENSSL_SOURCES_DIR}/crypto/ecdsa + ) + else() + add_definitions( + -DOPENSSL_NO_EC + -DOPENSSL_NO_ECDH + -DOPENSSL_NO_ECDSA + ) + endif() + + foreach(d ${OPENSSL_SOURCES_SUBDIRS}) + AUX_SOURCE_DIRECTORY(${d} OPENSSL_SOURCES) + endforeach() + + list(REMOVE_ITEM OPENSSL_SOURCES + ${OPENSSL_SOURCES_DIR}/crypto/LPdir_unix.c + ${OPENSSL_SOURCES_DIR}/crypto/LPdir_vms.c + ${OPENSSL_SOURCES_DIR}/crypto/LPdir_win.c + ${OPENSSL_SOURCES_DIR}/crypto/LPdir_win32.c + ${OPENSSL_SOURCES_DIR}/crypto/LPdir_wince.c + ${OPENSSL_SOURCES_DIR}/crypto/armcap.c + ${OPENSSL_SOURCES_DIR}/crypto/bf/bfs.cpp + ${OPENSSL_SOURCES_DIR}/crypto/bio/bss_rtcp.c + ${OPENSSL_SOURCES_DIR}/crypto/bn/exp.c + ${OPENSSL_SOURCES_DIR}/crypto/conf/cnf_save.c + ${OPENSSL_SOURCES_DIR}/crypto/conf/test.c + ${OPENSSL_SOURCES_DIR}/crypto/des/des.c + ${OPENSSL_SOURCES_DIR}/crypto/des/des3s.cpp + ${OPENSSL_SOURCES_DIR}/crypto/des/des_opts.c + ${OPENSSL_SOURCES_DIR}/crypto/des/dess.cpp + ${OPENSSL_SOURCES_DIR}/crypto/des/read_pwd.c + ${OPENSSL_SOURCES_DIR}/crypto/des/speed.c + ${OPENSSL_SOURCES_DIR}/crypto/evp/e_dsa.c + ${OPENSSL_SOURCES_DIR}/crypto/evp/m_ripemd.c + ${OPENSSL_SOURCES_DIR}/crypto/lhash/lh_test.c + ${OPENSSL_SOURCES_DIR}/crypto/md5/md5s.cpp + ${OPENSSL_SOURCES_DIR}/crypto/pkcs7/bio_ber.c + ${OPENSSL_SOURCES_DIR}/crypto/pkcs7/pk7_enc.c + ${OPENSSL_SOURCES_DIR}/crypto/ppccap.c + ${OPENSSL_SOURCES_DIR}/crypto/rand/randtest.c + ${OPENSSL_SOURCES_DIR}/crypto/s390xcap.c + ${OPENSSL_SOURCES_DIR}/crypto/sparcv9cap.c + ${OPENSSL_SOURCES_DIR}/crypto/x509v3/tabtest.c + ${OPENSSL_SOURCES_DIR}/crypto/x509v3/v3conf.c + ${OPENSSL_SOURCES_DIR}/ssl/ssl_task.c + ${OPENSSL_SOURCES_DIR}/crypto/LPdir_nyi.c + ${OPENSSL_SOURCES_DIR}/crypto/aes/aes_x86core.c + ${OPENSSL_SOURCES_DIR}/crypto/bio/bss_dgram.c + ${OPENSSL_SOURCES_DIR}/crypto/bn/bntest.c + ${OPENSSL_SOURCES_DIR}/crypto/bn/expspeed.c + ${OPENSSL_SOURCES_DIR}/crypto/bn/exptest.c + ${OPENSSL_SOURCES_DIR}/crypto/engine/enginetest.c + ${OPENSSL_SOURCES_DIR}/crypto/evp/evp_test.c + ${OPENSSL_SOURCES_DIR}/crypto/hmac/hmactest.c + ${OPENSSL_SOURCES_DIR}/crypto/md5/md5.c + ${OPENSSL_SOURCES_DIR}/crypto/md5/md5test.c + ${OPENSSL_SOURCES_DIR}/crypto/o_dir_test.c + ${OPENSSL_SOURCES_DIR}/crypto/pkcs7/dec.c + ${OPENSSL_SOURCES_DIR}/crypto/pkcs7/enc.c + ${OPENSSL_SOURCES_DIR}/crypto/pkcs7/sign.c + ${OPENSSL_SOURCES_DIR}/crypto/pkcs7/verify.c + ${OPENSSL_SOURCES_DIR}/crypto/rsa/rsa_test.c + ${OPENSSL_SOURCES_DIR}/crypto/sha/sha.c + ${OPENSSL_SOURCES_DIR}/crypto/sha/sha1.c + ${OPENSSL_SOURCES_DIR}/crypto/sha/sha1t.c + ${OPENSSL_SOURCES_DIR}/crypto/sha/sha1test.c + ${OPENSSL_SOURCES_DIR}/crypto/sha/sha256t.c + ${OPENSSL_SOURCES_DIR}/crypto/sha/sha512t.c + ${OPENSSL_SOURCES_DIR}/crypto/sha/shatest.c + ${OPENSSL_SOURCES_DIR}/crypto/srp/srptest.c + + ${OPENSSL_SOURCES_DIR}/crypto/bn/divtest.c + ${OPENSSL_SOURCES_DIR}/crypto/bn/bnspeed.c + ${OPENSSL_SOURCES_DIR}/crypto/des/destest.c + ${OPENSSL_SOURCES_DIR}/crypto/dh/p192.c + ${OPENSSL_SOURCES_DIR}/crypto/dh/p512.c + ${OPENSSL_SOURCES_DIR}/crypto/dh/p1024.c + ${OPENSSL_SOURCES_DIR}/crypto/des/rpw.c + ${OPENSSL_SOURCES_DIR}/ssl/ssltest.c + ${OPENSSL_SOURCES_DIR}/crypto/dsa/dsagen.c + ${OPENSSL_SOURCES_DIR}/crypto/dsa/dsatest.c + ${OPENSSL_SOURCES_DIR}/crypto/dh/dhtest.c + ${OPENSSL_SOURCES_DIR}/crypto/pqueue/pq_test.c + ${OPENSSL_SOURCES_DIR}/crypto/des/ncbc_enc.c + + ${OPENSSL_SOURCES_DIR}/crypto/evp/evp_extra_test.c + ${OPENSSL_SOURCES_DIR}/crypto/evp/verify_extra_test.c + ${OPENSSL_SOURCES_DIR}/crypto/x509/verify_extra_test.c + ${OPENSSL_SOURCES_DIR}/crypto/x509v3/v3prin.c + ${OPENSSL_SOURCES_DIR}/crypto/x509v3/v3nametest.c + ${OPENSSL_SOURCES_DIR}/crypto/constant_time_test.c + ${OPENSSL_SOURCES_DIR}/crypto/ec/ecp_nistz256_table.c + + ${OPENSSL_SOURCES_DIR}/ssl/heartbeat_test.c + ) + + + if ("${CMAKE_SYSTEM_NAME}" STREQUAL "Windows") + set_source_files_properties( + ${OPENSSL_SOURCES} + PROPERTIES COMPILE_DEFINITIONS + "OPENSSL_SYSNAME_WIN32;SO_WIN32;WIN32_LEAN_AND_MEAN;L_ENDIAN") + endif() + + source_group(ThirdParty\\OpenSSL REGULAR_EXPRESSION ${OPENSSL_SOURCES_DIR}/.*) + +else() + include(FindOpenSSL) + + if (NOT ${OPENSSL_FOUND}) + message(FATAL_ERROR "Unable to find OpenSSL") + endif() + + include_directories(${OPENSSL_INCLUDE_DIR}) + link_libraries(${OPENSSL_LIBRARIES}) +endif()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/OrthancFrameworkConfiguration.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,532 @@ +## +## This is a CMake configuration file that configures the core +## libraries of Orthanc. This file can be used by external projects so +## as to gain access to the Orthanc APIs (the most prominent examples +## are currently "Stone of Orthanc" and "Orthanc for whole-slide +## imaging plugin"). +## + + +##################################################################### +## Configuration of the components +##################################################################### + +# Path to the root folder of the Orthanc distribution +set(ORTHANC_ROOT ${CMAKE_CURRENT_LIST_DIR}/../..) + +# Some basic inclusions +include(CMakePushCheckState) +include(CheckFunctionExists) +include(CheckIncludeFile) +include(CheckIncludeFileCXX) +include(CheckIncludeFiles) +include(CheckLibraryExists) +include(CheckStructHasMember) +include(CheckSymbolExists) +include(CheckTypeSize) +include(FindPythonInterp) + +include(${CMAKE_CURRENT_LIST_DIR}/AutoGeneratedCode.cmake) +include(${CMAKE_CURRENT_LIST_DIR}/DownloadPackage.cmake) +include(${CMAKE_CURRENT_LIST_DIR}/Compiler.cmake) + + +##################################################################### +## Disable unneeded macros +##################################################################### + +if (NOT ENABLE_SQLITE) + unset(USE_SYSTEM_SQLITE CACHE) + add_definitions(-DORTHANC_ENABLE_SQLITE=0) +endif() + +if (NOT ENABLE_CRYPTO_OPTIONS) + unset(ENABLE_SSL CACHE) + unset(ENABLE_PKCS11 CACHE) + unset(USE_SYSTEM_OPENSSL CACHE) + unset(USE_SYSTEM_LIBP11 CACHE) + add_definitions( + -DORTHANC_ENABLE_SSL=0 + -DORTHANC_ENABLE_PKCS11=0 + ) +endif() + +if (NOT ENABLE_WEB_CLIENT) + unset(USE_SYSTEM_CURL CACHE) + add_definitions(-DORTHANC_ENABLE_CURL=0) +endif() + +if (NOT ENABLE_WEB_SERVER) + unset(ENABLE_CIVETWEB CACHE) + unset(USE_SYSTEM_CIVETWEB CACHE) + unset(USE_SYSTEM_MONGOOSE CACHE) + add_definitions( + -DORTHANC_ENABLE_CIVETWEB=0 + -DORTHANC_ENABLE_MONGOOSE=0 + ) +endif() + +if (NOT ENABLE_JPEG) + unset(USE_SYSTEM_LIBJPEG CACHE) + add_definitions(-DORTHANC_ENABLE_JPEG=0) +endif() + +if (NOT ENABLE_PNG) + unset(USE_SYSTEM_LIBPNG CACHE) + add_definitions(-DORTHANC_ENABLE_PNG=0) +endif() + +if (NOT ENABLE_LUA) + unset(USE_SYSTEM_LUA CACHE) + add_definitions(-DORTHANC_ENABLE_LUA=0) +endif() + +if (NOT ENABLE_PUGIXML) + unset(USE_SYSTEM_PUGIXML CACHE) + add_definitions(-DORTHANC_ENABLE_PUGIXML=0) +endif() + +if (NOT ENABLE_LOCALE) + unset(USE_SYSTEM_LIBICONV CACHE) + add_definitions(-DORTHANC_ENABLE_LOCALE=0) +endif() + +if (NOT ENABLE_GOOGLE_TEST) + unset(USE_SYSTEM_GOOGLE_TEST CACHE) + unset(USE_GOOGLE_TEST_DEBIAN_PACKAGE CACHE) +endif() + +if (NOT ENABLE_DCMTK) + add_definitions( + -DORTHANC_ENABLE_DCMTK=0 + -DORTHANC_ENABLE_DCMTK_NETWORKING=0 + ) + unset(DCMTK_DICTIONARY_DIR CACHE) + unset(USE_DCMTK_360 CACHE) + unset(USE_DCMTK_362_PRIVATE_DIC CACHE) + unset(USE_SYSTEM_DCMTK CACHE) + unset(ENABLE_DCMTK_JPEG CACHE) + unset(ENABLE_DCMTK_JPEG_LOSSLESS CACHE) +endif() + + +##################################################################### +## List of source files +##################################################################### + +set(ORTHANC_CORE_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/Cache/MemoryCache.cpp + ${ORTHANC_ROOT}/Core/ChunkedBuffer.cpp + ${ORTHANC_ROOT}/Core/Compression/DeflateBaseCompressor.cpp + ${ORTHANC_ROOT}/Core/Compression/GzipCompressor.cpp + ${ORTHANC_ROOT}/Core/Compression/HierarchicalZipWriter.cpp + ${ORTHANC_ROOT}/Core/Compression/ZipWriter.cpp + ${ORTHANC_ROOT}/Core/Compression/ZlibCompressor.cpp + ${ORTHANC_ROOT}/Core/DicomFormat/DicomArray.cpp + ${ORTHANC_ROOT}/Core/DicomFormat/DicomImageInformation.cpp + ${ORTHANC_ROOT}/Core/DicomFormat/DicomInstanceHasher.cpp + ${ORTHANC_ROOT}/Core/DicomFormat/DicomIntegerPixelAccessor.cpp + ${ORTHANC_ROOT}/Core/DicomFormat/DicomMap.cpp + ${ORTHANC_ROOT}/Core/DicomFormat/DicomTag.cpp + ${ORTHANC_ROOT}/Core/DicomFormat/DicomValue.cpp + ${ORTHANC_ROOT}/Core/Enumerations.cpp + ${ORTHANC_ROOT}/Core/Images/Font.cpp + ${ORTHANC_ROOT}/Core/Images/FontRegistry.cpp + ${ORTHANC_ROOT}/Core/Images/IImageWriter.cpp + ${ORTHANC_ROOT}/Core/Images/Image.cpp + ${ORTHANC_ROOT}/Core/Images/ImageAccessor.cpp + ${ORTHANC_ROOT}/Core/Images/ImageBuffer.cpp + ${ORTHANC_ROOT}/Core/Images/ImageProcessing.cpp + ${ORTHANC_ROOT}/Core/Logging.cpp + ${ORTHANC_ROOT}/Core/Toolbox.cpp + ${ORTHANC_ROOT}/Core/WebServiceParameters.cpp + ) + + +##################################################################### +## Configuration of optional third-party dependencies +##################################################################### + + +## +## Embedded database: SQLite +## + +if (ENABLE_SQLITE) + include(${CMAKE_CURRENT_LIST_DIR}/SQLiteConfiguration.cmake) + add_definitions(-DORTHANC_ENABLE_SQLITE=1) + + list(APPEND ORTHANC_CORE_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/SQLite/Connection.cpp + ${ORTHANC_ROOT}/Core/SQLite/FunctionContext.cpp + ${ORTHANC_ROOT}/Core/SQLite/Statement.cpp + ${ORTHANC_ROOT}/Core/SQLite/StatementId.cpp + ${ORTHANC_ROOT}/Core/SQLite/StatementReference.cpp + ${ORTHANC_ROOT}/Core/SQLite/Transaction.cpp + ) +endif() + + +## +## Cryptography: OpenSSL and libp11 +## Must be above "ENABLE_WEB_CLIENT" and "ENABLE_WEB_SERVER" +## + +if (ENABLE_CRYPTO_OPTIONS) + if (ENABLE_SSL) + include(${CMAKE_CURRENT_LIST_DIR}/OpenSslConfiguration.cmake) + add_definitions(-DORTHANC_ENABLE_SSL=1) + else() + unset(USE_SYSTEM_OPENSSL CACHE) + add_definitions(-DORTHANC_ENABLE_SSL=0) + endif() + + if (ENABLE_PKCS11) + if (ENABLE_SSL) + include(${CMAKE_CURRENT_LIST_DIR}/LibP11Configuration.cmake) + + add_definitions(-DORTHANC_ENABLE_PKCS11=1) + list(APPEND ORTHANC_CORE_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/Pkcs11.cpp + ) + else() + message(FATAL_ERROR "OpenSSL is required to enable PKCS#11 support") + endif() + else() + add_definitions(-DORTHANC_ENABLE_PKCS11=0) + endif() +endif() + + +## +## HTTP client: libcurl +## + +if (ENABLE_WEB_CLIENT) + include(${CMAKE_CURRENT_LIST_DIR}/LibCurlConfiguration.cmake) + add_definitions(-DORTHANC_ENABLE_CURL=1) + + list(APPEND ORTHANC_CORE_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/HttpClient.cpp + ) +endif() + + +## +## HTTP server: Mongoose 3.8 or Civetweb +## + +if (ENABLE_WEB_SERVER) + if (ENABLE_CIVETWEB) + include(${CMAKE_CURRENT_LIST_DIR}/CivetwebConfiguration.cmake) + add_definitions( + -DORTHANC_ENABLE_CIVETWEB=1 + -DORTHANC_ENABLE_MONGOOSE=0 + ) + else() + include(${CMAKE_CURRENT_LIST_DIR}/MongooseConfiguration.cmake) + add_definitions( + -DORTHANC_ENABLE_CIVETWEB=0 + -DORTHANC_ENABLE_MONGOOSE=1 + ) + endif() + + list(APPEND ORTHANC_CORE_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/HttpServer/BufferHttpSender.cpp + ${ORTHANC_ROOT}/Core/HttpServer/FilesystemHttpHandler.cpp + ${ORTHANC_ROOT}/Core/HttpServer/FilesystemHttpSender.cpp + ${ORTHANC_ROOT}/Core/HttpServer/HttpContentNegociation.cpp + ${ORTHANC_ROOT}/Core/HttpServer/HttpFileSender.cpp + ${ORTHANC_ROOT}/Core/HttpServer/HttpOutput.cpp + ${ORTHANC_ROOT}/Core/HttpServer/HttpStreamTranscoder.cpp + ${ORTHANC_ROOT}/Core/HttpServer/HttpToolbox.cpp + ${ORTHANC_ROOT}/Core/HttpServer/MongooseServer.cpp + ${ORTHANC_ROOT}/Core/HttpServer/StringHttpOutput.cpp + ${ORTHANC_ROOT}/Core/RestApi/RestApi.cpp + ${ORTHANC_ROOT}/Core/RestApi/RestApiCall.cpp + ${ORTHANC_ROOT}/Core/RestApi/RestApiGetCall.cpp + ${ORTHANC_ROOT}/Core/RestApi/RestApiHierarchy.cpp + ${ORTHANC_ROOT}/Core/RestApi/RestApiOutput.cpp + ${ORTHANC_ROOT}/Core/RestApi/RestApiPath.cpp + ) +endif() + + +## +## JPEG support: libjpeg +## + +if (ENABLE_JPEG) + include(${CMAKE_CURRENT_LIST_DIR}/LibJpegConfiguration.cmake) + add_definitions(-DORTHANC_ENABLE_JPEG=1) + + list(APPEND ORTHANC_CORE_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/Images/JpegErrorManager.cpp + ${ORTHANC_ROOT}/Core/Images/JpegReader.cpp + ${ORTHANC_ROOT}/Core/Images/JpegWriter.cpp + ) +endif() + + +## +## PNG support: libpng (in conjunction with zlib) +## + +if (ENABLE_PNG) + include(${CMAKE_CURRENT_LIST_DIR}/LibPngConfiguration.cmake) + add_definitions(-DORTHANC_ENABLE_PNG=1) + + list(APPEND ORTHANC_CORE_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/Images/PngReader.cpp + ${ORTHANC_ROOT}/Core/Images/PngWriter.cpp + ) +endif() + + +## +## Lua support +## + +if (ENABLE_LUA) + include(${CMAKE_CURRENT_LIST_DIR}/LuaConfiguration.cmake) + add_definitions(-DORTHANC_ENABLE_LUA=1) + + list(APPEND ORTHANC_CORE_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/Lua/LuaContext.cpp + ${ORTHANC_ROOT}/Core/Lua/LuaFunctionCall.cpp + ) +endif() + + +## +## XML support: pugixml +## + +if (ENABLE_PUGIXML) + include(${CMAKE_CURRENT_LIST_DIR}/PugixmlConfiguration.cmake) + add_definitions(-DORTHANC_ENABLE_PUGIXML=1) +endif() + + +## +## Locale support: libiconv +## + +if (ENABLE_LOCALE) + include(${CMAKE_CURRENT_LIST_DIR}/LibIconvConfiguration.cmake) + add_definitions(-DORTHANC_ENABLE_LOCALE=1) +endif() + + +## +## Google Test for unit testing +## + +if (ENABLE_GOOGLE_TEST) + include(${CMAKE_CURRENT_LIST_DIR}/GoogleTestConfiguration.cmake) +endif() + + + +##################################################################### +## Inclusion of mandatory third-party dependencies +##################################################################### + +include(${CMAKE_CURRENT_LIST_DIR}/JsonCppConfiguration.cmake) +include(${CMAKE_CURRENT_LIST_DIR}/ZlibConfiguration.cmake) + +if (NOT ORTHANC_SANDBOXED) + include(${CMAKE_CURRENT_LIST_DIR}/UuidConfiguration.cmake) +endif() + +# We put Boost as the last dependency, as it is the heaviest to +# configure, which allows to quickly spot problems when configuring +# static builds in other dependencies +include(${CMAKE_CURRENT_LIST_DIR}/BoostConfiguration.cmake) + + +##################################################################### +## Optional configuration of DCMTK +##################################################################### + +if (ENABLE_DCMTK) + if (NOT ENABLE_LOCALE) + message(FATAL_ERROR "Support for locales must be enabled if enabling DICOM support") + endif() + + include(${CMAKE_CURRENT_LIST_DIR}/DcmtkConfiguration.cmake) + + add_definitions(-DORTHANC_ENABLE_DCMTK=1) + + if (ENABLE_DCMTK_JPEG) + add_definitions(-DORTHANC_ENABLE_DCMTK_JPEG=1) + else() + add_definitions(-DORTHANC_ENABLE_DCMTK_JPEG=0) + endif() + + if (ENABLE_DCMTK_JPEG_LOSSLESS) + add_definitions(-DORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS=1) + else() + add_definitions(-DORTHANC_ENABLE_DCMTK_JPEG_LOSSLESS=0) + endif() + + set(ORTHANC_DICOM_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/DicomParsing/DicomDirWriter.cpp + ${ORTHANC_ROOT}/Core/DicomParsing/DicomModification.cpp + ${ORTHANC_ROOT}/Core/DicomParsing/FromDcmtkBridge.cpp + ${ORTHANC_ROOT}/Core/DicomParsing/ParsedDicomFile.cpp + ${ORTHANC_ROOT}/Core/DicomParsing/ToDcmtkBridge.cpp + + ${ORTHANC_ROOT}/Core/DicomParsing/Internals/DicomFrameIndex.cpp + ${ORTHANC_ROOT}/Core/DicomParsing/Internals/DicomImageDecoder.cpp + ) + + if (ENABLE_DCMTK_NETWORKING) + add_definitions(-DORTHANC_ENABLE_DCMTK_NETWORKING=1) + list(APPEND ORTHANC_DICOM_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/DicomNetworking/DicomFindAnswers.cpp + ${ORTHANC_ROOT}/Core/DicomNetworking/DicomServer.cpp + ${ORTHANC_ROOT}/Core/DicomNetworking/DicomUserConnection.cpp + ${ORTHANC_ROOT}/Core/DicomNetworking/RemoteModalityParameters.cpp + ${ORTHANC_ROOT}/Core/DicomNetworking/ReusableDicomUserConnection.cpp + + ${ORTHANC_ROOT}/Core/DicomNetworking/Internals/CommandDispatcher.cpp + ${ORTHANC_ROOT}/Core/DicomNetworking/Internals/FindScp.cpp + ${ORTHANC_ROOT}/Core/DicomNetworking/Internals/MoveScp.cpp + ${ORTHANC_ROOT}/Core/DicomNetworking/Internals/StoreScp.cpp + ) + else() + add_definitions(-DORTHANC_ENABLE_DCMTK_NETWORKING=0) + endif() + + if (STANDALONE_BUILD AND NOT HAS_EMBEDDED_RESOURCES) + EmbedResources( + ${DCMTK_DICTIONARIES} + ) + list(APPEND ORTHANC_DICOM_SOURCES_DEPENDENCIES + ${AUTOGENERATED_SOURCES} + ) + endif() +endif() + + +##################################################################### +## Configuration of the C/C++ macros +##################################################################### + +add_definitions( + -DORTHANC_API_VERSION="${ORTHANC_API_VERSION}" + -DORTHANC_DATABASE_VERSION=${ORTHANC_DATABASE_VERSION} + -DORTHANC_DEFAULT_DICOM_ENCODING=Encoding_Latin1 + -DORTHANC_ENABLE_BASE64=1 + -DORTHANC_ENABLE_MD5=1 + -DORTHANC_MAXIMUM_TAG_LENGTH=256 + -DORTHANC_VERSION="${ORTHANC_VERSION}" + ) + + +if (ORTHANC_SANDBOXED) + add_definitions( + -DORTHANC_SANDBOXED=1 + -DORTHANC_ENABLE_LOGGING_PLUGIN=0 + ) + + if (CMAKE_SYSTEM_NAME STREQUAL "Emscripten") + add_definitions( + -DORTHANC_ENABLE_LOGGING=1 + -DORTHANC_ENABLE_LOGGING_STDIO=1 + ) + else() + add_definitions( + -DORTHANC_ENABLE_LOGGING=0 + ) + endif() + +else() + add_definitions( + -DORTHANC_SANDBOXED=0 + -DORTHANC_ENABLE_LOGGING=1 + -DORTHANC_ENABLE_LOGGING_PLUGIN=0 + -DORTHANC_ENABLE_LOGGING_STDIO=0 + ) + + list(APPEND ORTHANC_CORE_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/Cache/SharedArchive.cpp + ${ORTHANC_ROOT}/Core/FileStorage/FilesystemStorage.cpp + ${ORTHANC_ROOT}/Core/FileStorage/StorageAccessor.cpp + ${ORTHANC_ROOT}/Core/MultiThreading/BagOfTasksProcessor.cpp + ${ORTHANC_ROOT}/Core/MultiThreading/Mutex.cpp + ${ORTHANC_ROOT}/Core/MultiThreading/ReaderWriterLock.cpp + ${ORTHANC_ROOT}/Core/MultiThreading/RunnableWorkersPool.cpp + ${ORTHANC_ROOT}/Core/MultiThreading/Semaphore.cpp + ${ORTHANC_ROOT}/Core/MultiThreading/SharedMessageQueue.cpp + ${ORTHANC_ROOT}/Core/SharedLibrary.cpp + ${ORTHANC_ROOT}/Core/SystemToolbox.cpp + ${ORTHANC_ROOT}/Core/TemporaryFile.cpp + ) +endif() + + +if (HAS_EMBEDDED_RESOURCES) + add_definitions(-DORTHANC_HAS_EMBEDDED_RESOURCES=1) + + list(APPEND ORTHANC_CORE_SOURCES_INTERNAL + ${ORTHANC_ROOT}/Core/HttpServer/EmbeddedResourceHttpHandler.cpp + ) +else() + add_definitions(-DORTHANC_HAS_EMBEDDED_RESOURCES=0) +endif() + + +##################################################################### +## Gathering of all the source code +##################################################################### + +# The "xxx_INTERNAL" variables list the source code that belongs to +# the Orthanc project. It can be used to configure precompiled headers +# if using Microsoft Visual Studio. + +# The "xxx_DEPENDENCIES" variables list the source code coming from +# third-party dependencies. + + +set(ORTHANC_CORE_SOURCES_DEPENDENCIES + ${BOOST_SOURCES} + ${CIVETWEB_SOURCES} + ${CURL_SOURCES} + ${JSONCPP_SOURCES} + ${LIBICONV_SOURCES} + ${LIBJPEG_SOURCES} + ${LIBP11_SOURCES} + ${LIBPNG_SOURCES} + ${LUA_SOURCES} + ${MONGOOSE_SOURCES} + ${OPENSSL_SOURCES} + ${PUGIXML_SOURCES} + ${SQLITE_SOURCES} + ${UUID_SOURCES} + ${ZLIB_SOURCES} + + ${ORTHANC_ROOT}/Resources/ThirdParty/md5/md5.c + ${ORTHANC_ROOT}/Resources/ThirdParty/base64/base64.cpp + + # This is the minizip distribution to create ZIP files using zlib + ${ORTHANC_ROOT}/Resources/ThirdParty/minizip/ioapi.c + ${ORTHANC_ROOT}/Resources/ThirdParty/minizip/zip.c + ) + +set(ORTHANC_CORE_SOURCES + ${ORTHANC_CORE_SOURCES_INTERNAL} + ${ORTHANC_CORE_SOURCES_DEPENDENCIES} + ) + +if (ENABLE_DCMTK) + list(APPEND ORTHANC_DICOM_SOURCES_DEPENDENCIES + ${DCMTK_SOURCES} + ) + + set(ORTHANC_DICOM_SOURCES + ${ORTHANC_DICOM_SOURCES_INTERNAL} + ${ORTHANC_DICOM_SOURCES_DEPENDENCIES} + ) +endif()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/OrthancFrameworkParameters.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,105 @@ +##################################################################### +## Versioning information +##################################################################### + +# Version of the build, should always be "mainline" except in release branches +set(ORTHANC_VERSION "mainline") + +# Version of the database schema. History: +# * Orthanc 0.1.0 -> Orthanc 0.3.0 = no versioning +# * Orthanc 0.3.1 = version 2 +# * Orthanc 0.4.0 -> Orthanc 0.7.2 = version 3 +# * Orthanc 0.7.3 -> Orthanc 0.8.4 = version 4 +# * Orthanc 0.8.5 -> Orthanc 0.9.4 = version 5 +# * Orthanc 0.9.5 -> mainline = version 6 +set(ORTHANC_DATABASE_VERSION 6) + +# Version of the Orthanc API, can be retrieved from "/system" URI in +# order to check whether new URI endpoints are available even if using +# the mainline version of Orthanc +set(ORTHANC_API_VERSION "1.0") + + +##################################################################### +## CMake parameters tunable by the user +##################################################################### + +# Support of static compilation +set(ALLOW_DOWNLOADS OFF CACHE BOOL "Allow CMake to download packages") +set(STATIC_BUILD OFF CACHE BOOL "Static build of the third-party libraries (necessary for Windows)") +set(STANDALONE_BUILD ON CACHE BOOL "Standalone build (all the resources are embedded, necessary for releases)") + +# Generic parameters of the build +set(ENABLE_CIVETWEB OFF CACHE BOOL "Use Civetweb instead of Mongoose (experimental)") +set(ENABLE_PKCS11 OFF CACHE BOOL "Enable PKCS#11 for HTTPS client authentication using hardware security modules and smart cards") +set(ENABLE_PROFILING OFF CACHE BOOL "Whether to enable the generation of profiling information with gprof") +set(ENABLE_SSL ON CACHE BOOL "Include support for SSL") +set(ENABLE_LUA_MODULES OFF CACHE BOOL "Enable support for loading external Lua modules (only meaningful if using static version of the Lua engine)") + +# Parameters to fine-tune linking against system libraries +set(USE_SYSTEM_BOOST ON CACHE BOOL "Use the system version of Boost") +set(USE_SYSTEM_CIVETWEB ON CACHE BOOL "Use the system version of Civetweb (experimental)") +set(USE_SYSTEM_CURL ON CACHE BOOL "Use the system version of LibCurl") +set(USE_SYSTEM_GOOGLE_TEST ON CACHE BOOL "Use the system version of Google Test") +set(USE_SYSTEM_JSONCPP ON CACHE BOOL "Use the system version of JsonCpp") +set(USE_SYSTEM_LIBICONV ON CACHE BOOL "Use the system version of libiconv") +set(USE_SYSTEM_LIBJPEG ON CACHE BOOL "Use the system version of libjpeg") +set(USE_SYSTEM_LIBP11 OFF CACHE BOOL "Use the system version of libp11 (PKCS#11 wrapper library)") +set(USE_SYSTEM_LIBPNG ON CACHE BOOL "Use the system version of libpng") +set(USE_SYSTEM_LUA ON CACHE BOOL "Use the system version of Lua") +set(USE_SYSTEM_MONGOOSE ON CACHE BOOL "Use the system version of Mongoose") +set(USE_SYSTEM_OPENSSL ON CACHE BOOL "Use the system version of OpenSSL") +set(USE_SYSTEM_PUGIXML ON CACHE BOOL "Use the system version of Pugixml") +set(USE_SYSTEM_SQLITE ON CACHE BOOL "Use the system version of SQLite") +set(USE_SYSTEM_UUID ON CACHE BOOL "Use the system version of the uuid library from e2fsprogs") +set(USE_SYSTEM_ZLIB ON CACHE BOOL "Use the system version of ZLib") + +# Parameters specific to DCMTK +set(DCMTK_DICTIONARY_DIR "" CACHE PATH "Directory containing the DCMTK dictionaries \"dicom.dic\" and \"private.dic\" (only when using system version of DCMTK)") +set(USE_DCMTK_360 OFF CACHE BOOL "Use older DCMTK version 3.6.0 in static builds (instead of default 3.6.2)") +set(USE_DCMTK_362_PRIVATE_DIC ON CACHE BOOL "Use the dictionary of private tags from DCMTK 3.6.2 if using DCMTK 3.6.0") +set(USE_SYSTEM_DCMTK ON CACHE BOOL "Use the system version of DCMTK") +set(ENABLE_DCMTK_JPEG ON CACHE BOOL "Enable JPEG-LS (Lossless) decompression") +set(ENABLE_DCMTK_JPEG_LOSSLESS ON CACHE BOOL "Enable JPEG-LS (Lossless) decompression") + +# Advanced and distribution-specific parameters +set(USE_GOOGLE_TEST_DEBIAN_PACKAGE OFF CACHE BOOL "Use the sources of Google Test shipped with libgtest-dev (Debian only)") +set(SYSTEM_MONGOOSE_USE_CALLBACKS ON CACHE BOOL "The system version of Mongoose uses callbacks (version >= 3.7)") +set(USE_BOOST_ICONV ON CACHE BOOL "Use iconv instead of wconv (Windows only)") +set(USE_PUGIXML ON CACHE BOOL "Use the Pugixml parser (turn off only for debug)") +set(USE_LEGACY_JSONCPP OFF CACHE BOOL "Use the old branch 0.x.y of JsonCpp, that does not require a C++11 compiler (for old versions of Visual Studio)") + +mark_as_advanced(USE_GOOGLE_TEST_DEBIAN_PACKAGE) +mark_as_advanced(SYSTEM_MONGOOSE_USE_CALLBACKS) +mark_as_advanced(USE_BOOST_ICONV) +mark_as_advanced(USE_PUGIXML) +mark_as_advanced(USE_LEGACY_JSONCPP) + + +##################################################################### +## Internal CMake parameters to enable the optional subcomponents of +## the Orthanc framework +##################################################################### + +# These options must be set to "ON" if compiling Orthanc, but might be +# set to "OFF" by third-party projects if their associated features +# are not required + +set(ENABLE_CRYPTO_OPTIONS OFF CACHE INTERNAL "Show options related to cryptography") +set(ENABLE_JPEG OFF CACHE INTERNAL "Enable support of JPEG") +set(ENABLE_GOOGLE_TEST OFF CACHE INTERNAL "Enable support of Google Test") +set(ENABLE_LOCALE OFF CACHE INTERNAL "Enable support for locales (notably in Boost)") +set(ENABLE_LUA OFF CACHE INTERNAL "Enable support of Lua scripting") +set(ENABLE_PNG OFF CACHE INTERNAL "Enable support of PNG") +set(ENABLE_PUGIXML OFF CACHE INTERNAL "Enable support of XML through Pugixml") +set(ENABLE_SQLITE OFF CACHE INTERNAL "Enable support of SQLite databases") +set(ENABLE_WEB_CLIENT OFF CACHE INTERNAL "Enable Web client") +set(ENABLE_WEB_SERVER OFF CACHE INTERNAL "Enable embedded Web server") +set(ENABLE_DCMTK OFF CACHE INTERNAL "Enable DCMTK") +set(ENABLE_DCMTK_NETWORKING OFF CACHE INTERNAL "Enable DICOM networking in DCMTK") + +set(HAS_EMBEDDED_RESOURCES OFF CACHE INTERNAL + "Whether resources are auto-generated using EmbedResources.py") + +set(ORTHANC_SANDBOXED OFF CACHE INTERNAL + "Whether Orthanc runs inside a sandboxed environment (such as Google NaCl or WebAssembly)")
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/UuidConfiguration.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,104 @@ +if (NOT ${CMAKE_SYSTEM_NAME} STREQUAL "Windows") + + if (STATIC_BUILD OR NOT USE_SYSTEM_UUID) + SET(E2FSPROGS_SOURCES_DIR ${CMAKE_BINARY_DIR}/e2fsprogs-1.43.8) + SET(E2FSPROGS_URL "http://www.orthanc-server.com/downloads/third-party/e2fsprogs-1.43.8.tar.gz") + SET(E2FSPROGS_MD5 "670b7a74a8ead5333acf21b9afc92b3c") + + DownloadPackage(${E2FSPROGS_MD5} ${E2FSPROGS_URL} "${E2FSPROGS_SOURCES_DIR}") + + include_directories( + ${E2FSPROGS_SOURCES_DIR}/lib + ) + + set(UUID_SOURCES + #${E2FSPROGS_SOURCES_DIR}/lib/uuid/tst_uuid.c + #${E2FSPROGS_SOURCES_DIR}/lib/uuid/uuid_time.c + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/clear.c + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/compare.c + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/copy.c + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/gen_uuid.c + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/isnull.c + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/pack.c + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/parse.c + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/unpack.c + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/unparse.c + ) + + check_include_file("net/if.h" HAVE_NET_IF_H) + check_include_file("net/if_dl.h" HAVE_NET_IF_DL_H) + check_include_file("netinet/in.h" HAVE_NETINET_IN_H) + check_include_file("stdlib.h" HAVE_STDLIB_H) + check_include_file("sys/file.h" HAVE_SYS_FILE_H) + check_include_file("sys/ioctl.h" HAVE_SYS_IOCTL_H) + check_include_file("sys/resource.h" HAVE_SYS_RESOURCE_H) + check_include_file("sys/socket.h" HAVE_SYS_SOCKET_H) + check_include_file("sys/sockio.h" HAVE_SYS_SOCKIO_H) + check_include_file("sys/syscall.h" HAVE_SYS_SYSCALL_H) + check_include_file("sys/time.h" HAVE_SYS_TIME_H) + check_include_file("sys/un.h" HAVE_SYS_UN_H) + check_include_file("unistd.h" HAVE_UNISTD_H) + + If (NOT HAVE_NET_IF_H) # This is the case of OpenBSD + unset(HAVE_NET_IF_H CACHE) + check_include_files("sys/socket.h;net/if.h" HAVE_NET_IF_H) + endif() + + if (NOT HAVE_NETINET_TCP_H) # This is the case of OpenBSD + unset(HAVE_NETINET_TCP_H CACHE) + check_include_files("sys/socket.h;netinet/tcp.h" HAVE_NETINET_TCP_H) + endif() + + file(WRITE ${E2FSPROGS_SOURCES_DIR}/lib/uuid/config.h.cmake " +#cmakedefine HAVE_NET_IF_H \@HAVE_NET_IF_H\@ +#cmakedefine HAVE_NET_IF_DL_H \@HAVE_NET_IF_DL_H\@ +#cmakedefine HAVE_NETINET_IN_H \@HAVE_NETINET_IN_H\@ +#cmakedefine HAVE_STDLIB_H \@HAVE_STDLIB_H \@ +#cmakedefine HAVE_SYS_FILE_H \@HAVE_SYS_FILE_H\@ +#cmakedefine HAVE_SYS_IOCTL_H \@HAVE_SYS_IOCTL_H\@ +#cmakedefine HAVE_SYS_RESOURCE_H \@HAVE_SYS_RESOURCE_H\@ +#cmakedefine HAVE_SYS_SOCKET_H \@HAVE_SYS_SOCKET_H\@ +#cmakedefine HAVE_SYS_SOCKIO_H \@HAVE_SYS_SOCKIO_H\@ +#cmakedefine HAVE_SYS_SYSCALL_H \@HAVE_SYS_SYSCALL_H\@ +#cmakedefine HAVE_SYS_TIME_H \@HAVE_SYS_TIME_H\@ +#cmakedefine HAVE_SYS_UN_H \@HAVE_SYS_UN_H\@ +#cmakedefine HAVE_UNISTD_H \@HAVE_UNISTD_H\@ +") + + configure_file( + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/config.h.cmake + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/config.h + ) + + + configure_file( + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/uuid.h.in + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/uuid.h + ) + + file(WRITE + ${E2FSPROGS_SOURCES_DIR}/lib/uuid/uuid_types.h + "#include <stdint.h>\n") + + #configure_file( + # ${E2FSPROGS_SOURCES_DIR}/lib/uuid/uuid_types.h.in + # ${E2FSPROGS_SOURCES_DIR}/lib/uuid/uuid_types.h + # ) + + source_group(ThirdParty\\uuid REGULAR_EXPRESSION ${E2FSPROGS_SOURCES_DIR}/.*) + + else() + CHECK_INCLUDE_FILE(uuid/uuid.h HAVE_UUID_H) + if (NOT HAVE_UUID_H) + message(FATAL_ERROR "Please install uuid-dev, e2fsprogs (OpenBSD) or e2fsprogs-libuuid (FreeBSD)") + endif() + + check_library_exists(uuid uuid_generate_random "" HAVE_UUID_LIB) + if (NOT HAVE_UUID_LIB) + message(FATAL_ERROR "Unable to find the uuid library") + endif() + + link_libraries(uuid) + endif() + +endif()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/CMake/ZlibConfiguration.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,45 @@ +if (STATIC_BUILD OR NOT USE_SYSTEM_ZLIB) + SET(ZLIB_SOURCES_DIR ${CMAKE_BINARY_DIR}/zlib-1.2.7) + SET(ZLIB_URL "http://www.orthanc-server.com/downloads/third-party/zlib-1.2.7.tar.gz") + SET(ZLIB_MD5 "60df6a37c56e7c1366cca812414f7b85") + + DownloadPackage(${ZLIB_MD5} ${ZLIB_URL} "${ZLIB_SOURCES_DIR}") + + include_directories( + ${ZLIB_SOURCES_DIR} + ) + + list(APPEND ZLIB_SOURCES + ${ZLIB_SOURCES_DIR}/adler32.c + ${ZLIB_SOURCES_DIR}/compress.c + ${ZLIB_SOURCES_DIR}/crc32.c + ${ZLIB_SOURCES_DIR}/deflate.c + ${ZLIB_SOURCES_DIR}/gzclose.c + ${ZLIB_SOURCES_DIR}/gzlib.c + ${ZLIB_SOURCES_DIR}/gzread.c + ${ZLIB_SOURCES_DIR}/gzwrite.c + ${ZLIB_SOURCES_DIR}/infback.c + ${ZLIB_SOURCES_DIR}/inffast.c + ${ZLIB_SOURCES_DIR}/inflate.c + ${ZLIB_SOURCES_DIR}/inftrees.c + ${ZLIB_SOURCES_DIR}/trees.c + ${ZLIB_SOURCES_DIR}/uncompr.c + ${ZLIB_SOURCES_DIR}/zutil.c + ) + + source_group(ThirdParty\\zlib REGULAR_EXPRESSION ${ZLIB_SOURCES_DIR}/.*) + + if (${CMAKE_SYSTEM_NAME} STREQUAL "FreeBSD" OR + ${CMAKE_SYSTEM_NAME} STREQUAL "OpenBSD") + # "ioapi.c" from zlib (minizip) expects the "IOAPI_NO_64" macro to be set to "true" + # https://ohse.de/uwe/articles/lfs.html + add_definitions( + -DIOAPI_NO_64=1 + ) + endif() + +else() + include(FindZLIB) + include_directories(${ZLIB_INCLUDE_DIRS}) + link_libraries(${ZLIB_LIBRARIES}) +endif()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/EmbedResources.py Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,431 @@ +#!/usr/bin/python + +# Orthanc - A Lightweight, RESTful DICOM Store +# Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics +# Department, University Hospital of Liege, Belgium +# Copyright (C) 2017-2018 Osimis S.A., Belgium +# +# This program is free software: you can redistribute it and/or +# modify it under the terms of the GNU General Public License as +# published by the Free Software Foundation, either version 3 of the +# License, or (at your option) any later version. +# +# In addition, as a special exception, the copyright holders of this +# program give permission to link the code of its release with the +# OpenSSL project's "OpenSSL" library (or with modified versions of it +# that use the same license as the "OpenSSL" library), and distribute +# the linked executables. You must obey the GNU General Public License +# in all respects for all of the code used other than "OpenSSL". If you +# modify file(s) with this exception, you may extend this exception to +# your version of the file(s), but you are not obligated to do so. If +# you do not wish to do so, delete this exception statement from your +# version. If you delete this exception statement from all source files +# in the program, then also delete it here. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with this program. If not, see <http://www.gnu.org/licenses/>. + + +import sys +import os +import os.path +import pprint +import re + +UPCASE_CHECK = True +USE_SYSTEM_EXCEPTION = False +EXCEPTION_CLASS = 'OrthancException' +OUT_OF_RANGE_EXCEPTION = 'OrthancException(ErrorCode_ParameterOutOfRange)' +INEXISTENT_PATH_EXCEPTION = 'OrthancException(ErrorCode_InexistentItem)' +NAMESPACE = 'Orthanc' + +ARGS = [] +for i in range(len(sys.argv)): + if not sys.argv[i].startswith('--'): + ARGS.append(sys.argv[i]) + elif sys.argv[i].lower() == '--no-upcase-check': + UPCASE_CHECK = False + elif sys.argv[i].lower() == '--system-exception': + USE_SYSTEM_EXCEPTION = True + EXCEPTION_CLASS = '::std::runtime_error' + OUT_OF_RANGE_EXCEPTION = '%s("Parameter out of range")' % EXCEPTION_CLASS + INEXISTENT_PATH_EXCEPTION = '%s("Unknown path in a directory resource")' % EXCEPTION_CLASS + elif sys.argv[i].startswith('--namespace='): + NAMESPACE = sys.argv[i][sys.argv[i].find('=') + 1 : ] + +if len(ARGS) < 2 or len(ARGS) % 2 != 0: + print ('Usage:') + print ('python %s [--no-upcase-check] [--system-exception] [--namespace=<Namespace>] <TargetBaseFilename> [ <Name> <Source> ]*' % sys.argv[0]) + exit(-1) + +TARGET_BASE_FILENAME = ARGS[1] +SOURCES = ARGS[2:] + +try: + # Make sure the destination directory exists + os.makedirs(os.path.normpath(os.path.join(TARGET_BASE_FILENAME, '..'))) +except: + pass + + +##################################################################### +## Read each resource file +##################################################################### + +def CheckNoUpcase(s): + global UPCASE_CHECK + if (UPCASE_CHECK and + re.search('[A-Z]', s) != None): + raise Exception("Path in a directory with an upcase letter: %s" % s) + +resources = {} + +counter = 0 +i = 0 +while i < len(SOURCES): + resourceName = SOURCES[i].upper() + pathName = SOURCES[i + 1] + + if not os.path.exists(pathName): + raise Exception("Non existing path: %s" % pathName) + + if resourceName in resources: + raise Exception("Twice the same resource: " + resourceName) + + if os.path.isdir(pathName): + # The resource is a directory: Recursively explore its files + content = {} + for root, dirs, files in os.walk(pathName): + base = os.path.relpath(root, pathName) + + # Fix issue #24 (Build fails on OSX when directory has .DS_Store files): + # Ignore folders whose name starts with a dot (".") + if base.find('/.') != -1: + print('Ignoring folder: %s' % root) + continue + + for f in files: + if f.find('~') == -1: # Ignore Emacs backup files + if base == '.': + r = f + else: + r = os.path.join(base, f) + + CheckNoUpcase(r) + r = '/' + r.replace('\\', '/') + if r in content: + raise Exception("Twice the same filename (check case): " + r) + + content[r] = { + 'Filename' : os.path.join(root, f), + 'Index' : counter + } + counter += 1 + + resources[resourceName] = { + 'Type' : 'Directory', + 'Files' : content + } + + elif os.path.isfile(pathName): + resources[resourceName] = { + 'Type' : 'File', + 'Index' : counter, + 'Filename' : pathName + } + counter += 1 + + else: + raise Exception("Not a regular file, nor a directory: " + pathName) + + i += 2 + +#pprint.pprint(resources) + + +##################################################################### +## Write .h header +##################################################################### + +header = open(TARGET_BASE_FILENAME + '.h', 'w') + +header.write(""" +#pragma once + +#include <string> +#include <list> + +#if defined(_MSC_VER) +# pragma warning(disable: 4065) // "Switch statement contains 'default' but no 'case' labels" +#endif + +namespace %s +{ + namespace EmbeddedResources + { + enum FileResourceId + { +""" % NAMESPACE) + +isFirst = True +for name in resources: + if resources[name]['Type'] == 'File': + if isFirst: + isFirst = False + else: + header.write(',\n') + header.write(' %s' % name) + +header.write(""" + }; + + enum DirectoryResourceId + { +""") + +isFirst = True +for name in resources: + if resources[name]['Type'] == 'Directory': + if isFirst: + isFirst = False + else: + header.write(',\n') + header.write(' %s' % name) + +header.write(""" + }; + + const void* GetFileResourceBuffer(FileResourceId id); + size_t GetFileResourceSize(FileResourceId id); + void GetFileResource(std::string& result, FileResourceId id); + + const void* GetDirectoryResourceBuffer(DirectoryResourceId id, const char* path); + size_t GetDirectoryResourceSize(DirectoryResourceId id, const char* path); + void GetDirectoryResource(std::string& result, DirectoryResourceId id, const char* path); + + void ListResources(std::list<std::string>& result, DirectoryResourceId id); + } +} +""") +header.close() + + + +##################################################################### +## Write the resource content in the .cpp source +##################################################################### + +PYTHON_MAJOR_VERSION = sys.version_info[0] + +def WriteResource(cpp, item): + cpp.write(' static const uint8_t resource%dBuffer[] = {' % item['Index']) + + f = open(item['Filename'], "rb") + content = f.read() + f.close() + + # http://stackoverflow.com/a/1035360 + pos = 0 + for b in content: + if PYTHON_MAJOR_VERSION == 2: + c = ord(b[0]) + else: + c = b + + if pos > 0: + cpp.write(', ') + + if (pos % 16) == 0: + cpp.write('\n ') + + if c < 0: + raise Exception("Internal error") + + cpp.write("0x%02x" % c) + pos += 1 + + # Zero-size array are disallowed, so we put one single void character in it. + if pos == 0: + cpp.write(' 0') + + cpp.write(' };\n') + cpp.write(' static const size_t resource%dSize = %d;\n' % (item['Index'], pos)) + + +cpp = open(TARGET_BASE_FILENAME + '.cpp', 'w') + +cpp.write('#include "%s.h"\n' % os.path.basename(TARGET_BASE_FILENAME)) + +if USE_SYSTEM_EXCEPTION: + cpp.write('#include <stdexcept>') +else: + cpp.write('#include "%s/Core/OrthancException.h"' % os.path.abspath(os.path.join(os.path.dirname(__file__), '..'))) + +cpp.write(""" +#include <stdint.h> +#include <string.h> + +namespace %s +{ + namespace EmbeddedResources + { +""" % NAMESPACE) + + +for name in resources: + if resources[name]['Type'] == 'File': + WriteResource(cpp, resources[name]) + else: + for f in resources[name]['Files']: + WriteResource(cpp, resources[name]['Files'][f]) + + + +##################################################################### +## Write the accessors to the file resources in .cpp +##################################################################### + +cpp.write(""" + const void* GetFileResourceBuffer(FileResourceId id) + { + switch (id) + { +""") +for name in resources: + if resources[name]['Type'] == 'File': + cpp.write(' case %s:\n' % name) + cpp.write(' return resource%dBuffer;\n' % resources[name]['Index']) + +cpp.write(""" + default: + throw %s; + } + } + + size_t GetFileResourceSize(FileResourceId id) + { + switch (id) + { +""" % OUT_OF_RANGE_EXCEPTION) + +for name in resources: + if resources[name]['Type'] == 'File': + cpp.write(' case %s:\n' % name) + cpp.write(' return resource%dSize;\n' % resources[name]['Index']) + +cpp.write(""" + default: + throw %s; + } + } +""" % OUT_OF_RANGE_EXCEPTION) + + + +##################################################################### +## Write the accessors to the directory resources in .cpp +##################################################################### + +cpp.write(""" + const void* GetDirectoryResourceBuffer(DirectoryResourceId id, const char* path) + { + switch (id) + { +""") + +for name in resources: + if resources[name]['Type'] == 'Directory': + cpp.write(' case %s:\n' % name) + isFirst = True + for path in resources[name]['Files']: + cpp.write(' if (!strcmp(path, "%s"))\n' % path) + cpp.write(' return resource%dBuffer;\n' % resources[name]['Files'][path]['Index']) + cpp.write(' throw %s;\n\n' % INEXISTENT_PATH_EXCEPTION) + +cpp.write(""" default: + throw %s; + } + } + + size_t GetDirectoryResourceSize(DirectoryResourceId id, const char* path) + { + switch (id) + { +""" % OUT_OF_RANGE_EXCEPTION) + +for name in resources: + if resources[name]['Type'] == 'Directory': + cpp.write(' case %s:\n' % name) + isFirst = True + for path in resources[name]['Files']: + cpp.write(' if (!strcmp(path, "%s"))\n' % path) + cpp.write(' return resource%dSize;\n' % resources[name]['Files'][path]['Index']) + cpp.write(' throw %s;\n\n' % INEXISTENT_PATH_EXCEPTION) + +cpp.write(""" default: + throw %s; + } + } +""" % OUT_OF_RANGE_EXCEPTION) + + + + +##################################################################### +## List the resources in a directory +##################################################################### + +cpp.write(""" + void ListResources(std::list<std::string>& result, DirectoryResourceId id) + { + result.clear(); + + switch (id) + { +""") + +for name in resources: + if resources[name]['Type'] == 'Directory': + cpp.write(' case %s:\n' % name) + for path in sorted(resources[name]['Files']): + cpp.write(' result.push_back("%s");\n' % path) + cpp.write(' break;\n\n') + +cpp.write(""" default: + throw %s; + } + } +""" % OUT_OF_RANGE_EXCEPTION) + + + + +##################################################################### +## Write the convenience wrappers in .cpp +##################################################################### + +cpp.write(""" + void GetFileResource(std::string& result, FileResourceId id) + { + size_t size = GetFileResourceSize(id); + result.resize(size); + if (size > 0) + memcpy(&result[0], GetFileResourceBuffer(id), size); + } + + void GetDirectoryResource(std::string& result, DirectoryResourceId id, const char* path) + { + size_t size = GetDirectoryResourceSize(id, path); + result.resize(size); + if (size > 0) + memcpy(&result[0], GetDirectoryResourceBuffer(id, path), size); + } + } +} +""") +cpp.close()
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/LinuxStandardBaseToolchain.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,66 @@ +# LSB_CC=gcc-4.8 LSB_CXX=g++-4.8 cmake .. -DCMAKE_BUILD_TYPE=Debug -DCMAKE_TOOLCHAIN_FILE=../Resources/LinuxStandardBaseToolchain.cmake + +INCLUDE(CMakeForceCompiler) + +SET(LSB_PATH $ENV{LSB_PATH}) +SET(LSB_CC $ENV{LSB_CC}) +SET(LSB_CXX $ENV{LSB_CXX}) +SET(LSB_TARGET_VERSION "4.0") + +IF ("${LSB_PATH}" STREQUAL "") + SET(LSB_PATH "/opt/lsb") +ENDIF() + +IF (EXISTS ${LSB_PATH}/lib64) + SET(LSB_TARGET_PROCESSOR "x86_64") + SET(LSB_LIBPATH ${LSB_PATH}/lib64-${LSB_TARGET_VERSION}) +ELSEIF (EXISTS ${LSB_PATH}/lib) + SET(LSB_TARGET_PROCESSOR "x86") + SET(LSB_LIBPATH ${LSB_PATH}/lib-${LSB_TARGET_VERSION}) +ELSE() + MESSAGE(FATAL_ERROR "Unable to detect the target processor architecture. Check the LSB_PATH environment variable.") +ENDIF() + +SET(LSB_CPPPATH ${LSB_PATH}/include) +SET(PKG_CONFIG_PATH ${LSB_LIBPATH}/pkgconfig/) + +# the name of the target operating system +SET(CMAKE_SYSTEM_NAME Linux) +SET(CMAKE_SYSTEM_VERSION LinuxStandardBase) +SET(CMAKE_SYSTEM_PROCESSOR ${LSB_TARGET_PROCESSOR}) + +# which compilers to use for C and C++ +SET(CMAKE_C_COMPILER ${LSB_PATH}/bin/lsbcc) +CMAKE_FORCE_CXX_COMPILER(${LSB_PATH}/bin/lsbc++ GNU) + +# here is the target environment located +SET(CMAKE_FIND_ROOT_PATH ${LSB_PATH}) + +# adjust the default behaviour of the FIND_XXX() commands: +# search headers and libraries in the target environment, search +# programs in the host environment +SET(CMAKE_FIND_ROOT_PATH_MODE_PROGRAM NEVER) +SET(CMAKE_FIND_ROOT_PATH_MODE_LIBRARY NEVER) +SET(CMAKE_FIND_ROOT_PATH_MODE_INCLUDE NEVER) + +SET(CMAKE_CROSSCOMPILING OFF) + + +SET(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} --lsb-target-version=${LSB_TARGET_VERSION} -I${LSB_PATH}/include" CACHE INTERNAL "" FORCE) +SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} --lsb-target-version=${LSB_TARGET_VERSION} -nostdinc++ -I${LSB_PATH}/include -I${LSB_PATH}/include/c++ -I${LSB_PATH}/include/c++/backward" CACHE INTERNAL "" FORCE) +SET(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} --lsb-target-version=${LSB_TARGET_VERSION} -L${LSB_LIBPATH} --lsb-besteffort" CACHE INTERNAL "" FORCE) +SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} --lsb-target-version=${LSB_TARGET_VERSION} -L${LSB_LIBPATH} --lsb-besteffort" CACHE INTERNAL "" FORCE) + +if (NOT "${LSB_CXX}" STREQUAL "") + SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} --lsb-cxx=${LSB_CXX}") + SET(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} --lsb-cxx=${LSB_CXX}") + SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} --lsb-cxx=${LSB_CXX}") +endif() + +if (NOT "${LSB_CC}" STREQUAL "") + SET(CMAKE_C_FLAGS "${CMAKE_CC_FLAGS} --lsb-cc=${LSB_CC}") + SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} --lsb-cc=${LSB_CC}") + SET(CMAKE_SHARED_LINKER_FLAGS "${CMAKE_SHARED_LINKER_FLAGS} --lsb-cc=${LSB_CC}") + SET(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} --lsb-cc=${LSB_CC}") +endif() +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/MinGW-W64-Toolchain32.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,17 @@ +# the name of the target operating system +set(CMAKE_SYSTEM_NAME Windows) + +# which compilers to use for C and C++ +set(CMAKE_C_COMPILER i686-w64-mingw32-gcc) +set(CMAKE_CXX_COMPILER i686-w64-mingw32-g++) +set(CMAKE_RC_COMPILER i686-w64-mingw32-windres) + +# here is the target environment located +set(CMAKE_FIND_ROOT_PATH /usr/i686-w64-mingw32) + +# adjust the default behaviour of the FIND_XXX() commands: +# search headers and libraries in the target environment, search +# programs in the host environment +set(CMAKE_FIND_ROOT_PATH_MODE_PROGRAM NEVER) +set(CMAKE_FIND_ROOT_PATH_MODE_LIBRARY ONLY) +set(CMAKE_FIND_ROOT_PATH_MODE_INCLUDE ONLY)
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/MinGW-W64-Toolchain64.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,17 @@ +# the name of the target operating system +set(CMAKE_SYSTEM_NAME Windows) + +# which compilers to use for C and C++ +set(CMAKE_C_COMPILER x86_64-w64-mingw32-gcc) +set(CMAKE_CXX_COMPILER x86_64-w64-mingw32-g++) +set(CMAKE_RC_COMPILER x86_64-w64-mingw32-windres) + +# here is the target environment located +set(CMAKE_FIND_ROOT_PATH /usr/i686-w64-mingw32) + +# adjust the default behaviour of the FIND_XXX() commands: +# search headers and libraries in the target environment, search +# programs in the host environment +set(CMAKE_FIND_ROOT_PATH_MODE_PROGRAM NEVER) +set(CMAKE_FIND_ROOT_PATH_MODE_LIBRARY ONLY) +set(CMAKE_FIND_ROOT_PATH_MODE_INCLUDE ONLY)
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/MinGWToolchain.cmake Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,17 @@ +# the name of the target operating system +set(CMAKE_SYSTEM_NAME Windows) + +# which compilers to use for C and C++ +set(CMAKE_C_COMPILER i586-mingw32msvc-gcc) +set(CMAKE_CXX_COMPILER i586-mingw32msvc-g++) +set(CMAKE_RC_COMPILER i586-mingw32msvc-windres) + +# here is the target environment located +set(CMAKE_FIND_ROOT_PATH /usr/i586-mingw32msvc) + +# adjust the default behaviour of the FIND_XXX() commands: +# search headers and libraries in the target environment, search +# programs in the host environment +set(CMAKE_FIND_ROOT_PATH_MODE_PROGRAM NEVER) +set(CMAKE_FIND_ROOT_PATH_MODE_LIBRARY ONLY) +set(CMAKE_FIND_ROOT_PATH_MODE_INCLUDE ONLY)
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/Patches/boost-1.65.1-linux-standard-base.patch Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,12 @@ +diff -urEb boost_1_65_1.orig/boost/move/adl_move_swap.hpp boost_1_65_1/boost/move/adl_move_swap.hpp +--- boost_1_65_1.orig/boost/move/adl_move_swap.hpp 2017-11-08 17:43:20.000000000 +0100 ++++ boost_1_65_1/boost/move/adl_move_swap.hpp 2018-01-02 15:34:48.829052917 +0100 +@@ -28,6 +28,8 @@ + //Try to avoid including <algorithm>, as it's quite big + #if defined(_MSC_VER) && defined(BOOST_DINKUMWARE_STDLIB) + #include <utility> //Dinkum libraries define std::swap in utility which is lighter than algorithm ++#elif defined(__LSB_VERSION__) ++# include <utility> + #elif defined(BOOST_GNU_STDLIB) + //For non-GCC compilers, where GNUC version is not very reliable, or old GCC versions + //use the good old stl_algobase header, which is quite lightweight
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/VisualStudio/stdint.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,259 @@ +// ISO C9x compliant stdint.h for Microsoft Visual Studio +// Based on ISO/IEC 9899:TC2 Committee draft (May 6, 2005) WG14/N1124 +// +// Copyright (c) 2006-2013 Alexander Chemeris +// +// Redistribution and use in source and binary forms, with or without +// modification, are permitted provided that the following conditions are met: +// +// 1. Redistributions of source code must retain the above copyright notice, +// this list of conditions and the following disclaimer. +// +// 2. Redistributions in binary form must reproduce the above copyright +// notice, this list of conditions and the following disclaimer in the +// documentation and/or other materials provided with the distribution. +// +// 3. Neither the name of the product nor the names of its contributors may +// be used to endorse or promote products derived from this software +// without specific prior written permission. +// +// THIS SOFTWARE IS PROVIDED BY THE AUTHOR ``AS IS'' AND ANY EXPRESS OR IMPLIED +// WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF +// MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO +// EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, +// SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, +// PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; +// OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, +// WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR +// OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF +// ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. +// +/////////////////////////////////////////////////////////////////////////////// + +#ifndef _MSC_VER // [ +#error "Use this header only with Microsoft Visual C++ compilers!" +#endif // _MSC_VER ] + +#ifndef _MSC_STDINT_H_ // [ +#define _MSC_STDINT_H_ + +#if _MSC_VER > 1000 +#pragma once +#endif + +#if _MSC_VER >= 1600 // [ +#include <stdint.h> +#else // ] _MSC_VER >= 1600 [ + +#include <limits.h> + +// For Visual Studio 6 in C++ mode and for many Visual Studio versions when +// compiling for ARM we should wrap <wchar.h> include with 'extern "C++" {}' +// or compiler give many errors like this: +// error C2733: second C linkage of overloaded function 'wmemchr' not allowed +#ifdef __cplusplus +extern "C" { +#endif +# include <wchar.h> +#ifdef __cplusplus +} +#endif + +// Define _W64 macros to mark types changing their size, like intptr_t. +#ifndef _W64 +# if !defined(__midl) && (defined(_X86_) || defined(_M_IX86)) && _MSC_VER >= 1300 +# define _W64 __w64 +# else +# define _W64 +# endif +#endif + + +// 7.18.1 Integer types + +// 7.18.1.1 Exact-width integer types + +// Visual Studio 6 and Embedded Visual C++ 4 doesn't +// realize that, e.g. char has the same size as __int8 +// so we give up on __intX for them. +#if (_MSC_VER < 1300) + typedef signed char int8_t; + typedef signed short int16_t; + typedef signed int int32_t; + typedef unsigned char uint8_t; + typedef unsigned short uint16_t; + typedef unsigned int uint32_t; +#else + typedef signed __int8 int8_t; + typedef signed __int16 int16_t; + typedef signed __int32 int32_t; + typedef unsigned __int8 uint8_t; + typedef unsigned __int16 uint16_t; + typedef unsigned __int32 uint32_t; +#endif +typedef signed __int64 int64_t; +typedef unsigned __int64 uint64_t; + + +// 7.18.1.2 Minimum-width integer types +typedef int8_t int_least8_t; +typedef int16_t int_least16_t; +typedef int32_t int_least32_t; +typedef int64_t int_least64_t; +typedef uint8_t uint_least8_t; +typedef uint16_t uint_least16_t; +typedef uint32_t uint_least32_t; +typedef uint64_t uint_least64_t; + +// 7.18.1.3 Fastest minimum-width integer types +typedef int8_t int_fast8_t; +typedef int16_t int_fast16_t; +typedef int32_t int_fast32_t; +typedef int64_t int_fast64_t; +typedef uint8_t uint_fast8_t; +typedef uint16_t uint_fast16_t; +typedef uint32_t uint_fast32_t; +typedef uint64_t uint_fast64_t; + +// 7.18.1.4 Integer types capable of holding object pointers +#ifdef _WIN64 // [ + typedef signed __int64 intptr_t; + typedef unsigned __int64 uintptr_t; +#else // _WIN64 ][ + typedef _W64 signed int intptr_t; + typedef _W64 unsigned int uintptr_t; +#endif // _WIN64 ] + +// 7.18.1.5 Greatest-width integer types +typedef int64_t intmax_t; +typedef uint64_t uintmax_t; + + +// 7.18.2 Limits of specified-width integer types + +#if !defined(__cplusplus) || defined(__STDC_LIMIT_MACROS) // [ See footnote 220 at page 257 and footnote 221 at page 259 + +// 7.18.2.1 Limits of exact-width integer types +#define INT8_MIN ((int8_t)_I8_MIN) +#define INT8_MAX _I8_MAX +#define INT16_MIN ((int16_t)_I16_MIN) +#define INT16_MAX _I16_MAX +#define INT32_MIN ((int32_t)_I32_MIN) +#define INT32_MAX _I32_MAX +#define INT64_MIN ((int64_t)_I64_MIN) +#define INT64_MAX _I64_MAX +#define UINT8_MAX _UI8_MAX +#define UINT16_MAX _UI16_MAX +#define UINT32_MAX _UI32_MAX +#define UINT64_MAX _UI64_MAX + +// 7.18.2.2 Limits of minimum-width integer types +#define INT_LEAST8_MIN INT8_MIN +#define INT_LEAST8_MAX INT8_MAX +#define INT_LEAST16_MIN INT16_MIN +#define INT_LEAST16_MAX INT16_MAX +#define INT_LEAST32_MIN INT32_MIN +#define INT_LEAST32_MAX INT32_MAX +#define INT_LEAST64_MIN INT64_MIN +#define INT_LEAST64_MAX INT64_MAX +#define UINT_LEAST8_MAX UINT8_MAX +#define UINT_LEAST16_MAX UINT16_MAX +#define UINT_LEAST32_MAX UINT32_MAX +#define UINT_LEAST64_MAX UINT64_MAX + +// 7.18.2.3 Limits of fastest minimum-width integer types +#define INT_FAST8_MIN INT8_MIN +#define INT_FAST8_MAX INT8_MAX +#define INT_FAST16_MIN INT16_MIN +#define INT_FAST16_MAX INT16_MAX +#define INT_FAST32_MIN INT32_MIN +#define INT_FAST32_MAX INT32_MAX +#define INT_FAST64_MIN INT64_MIN +#define INT_FAST64_MAX INT64_MAX +#define UINT_FAST8_MAX UINT8_MAX +#define UINT_FAST16_MAX UINT16_MAX +#define UINT_FAST32_MAX UINT32_MAX +#define UINT_FAST64_MAX UINT64_MAX + +// 7.18.2.4 Limits of integer types capable of holding object pointers +#ifdef _WIN64 // [ +# define INTPTR_MIN INT64_MIN +# define INTPTR_MAX INT64_MAX +# define UINTPTR_MAX UINT64_MAX +#else // _WIN64 ][ +# define INTPTR_MIN INT32_MIN +# define INTPTR_MAX INT32_MAX +# define UINTPTR_MAX UINT32_MAX +#endif // _WIN64 ] + +// 7.18.2.5 Limits of greatest-width integer types +#define INTMAX_MIN INT64_MIN +#define INTMAX_MAX INT64_MAX +#define UINTMAX_MAX UINT64_MAX + +// 7.18.3 Limits of other integer types + +#ifdef _WIN64 // [ +# define PTRDIFF_MIN _I64_MIN +# define PTRDIFF_MAX _I64_MAX +#else // _WIN64 ][ +# define PTRDIFF_MIN _I32_MIN +# define PTRDIFF_MAX _I32_MAX +#endif // _WIN64 ] + +#define SIG_ATOMIC_MIN INT_MIN +#define SIG_ATOMIC_MAX INT_MAX + +#ifndef SIZE_MAX // [ +# ifdef _WIN64 // [ +# define SIZE_MAX _UI64_MAX +# else // _WIN64 ][ +# define SIZE_MAX _UI32_MAX +# endif // _WIN64 ] +#endif // SIZE_MAX ] + +// WCHAR_MIN and WCHAR_MAX are also defined in <wchar.h> +#ifndef WCHAR_MIN // [ +# define WCHAR_MIN 0 +#endif // WCHAR_MIN ] +#ifndef WCHAR_MAX // [ +# define WCHAR_MAX _UI16_MAX +#endif // WCHAR_MAX ] + +#define WINT_MIN 0 +#define WINT_MAX _UI16_MAX + +#endif // __STDC_LIMIT_MACROS ] + + +// 7.18.4 Limits of other integer types + +#if !defined(__cplusplus) || defined(__STDC_CONSTANT_MACROS) // [ See footnote 224 at page 260 + +// 7.18.4.1 Macros for minimum-width integer constants + +#define INT8_C(val) val##i8 +#define INT16_C(val) val##i16 +#define INT32_C(val) val##i32 +#define INT64_C(val) val##i64 + +#define UINT8_C(val) val##ui8 +#define UINT16_C(val) val##ui16 +#define UINT32_C(val) val##ui32 +#define UINT64_C(val) val##ui64 + +// 7.18.4.2 Macros for greatest-width integer constants +// These #ifndef's are needed to prevent collisions with <boost/cstdint.hpp>. +// Check out Issue 9 for the details. +#ifndef INTMAX_C // [ +# define INTMAX_C INT64_C +#endif // INTMAX_C ] +#ifndef UINTMAX_C // [ +# define UINTMAX_C UINT64_C +#endif // UINTMAX_C ] + +#endif // __STDC_CONSTANT_MACROS ] + +#endif // _MSC_VER >= 1600 ] + +#endif // _MSC_STDINT_H_ ]
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/base64/base64.cpp Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,128 @@ +/* + base64.cpp and base64.h + + Copyright (C) 2004-2008 René Nyffenegger + + This source code is provided 'as-is', without any express or implied + warranty. In no event will the author be held liable for any damages + arising from the use of this software. + + Permission is granted to anyone to use this software for any purpose, + including commercial applications, and to alter it and redistribute it + freely, subject to the following restrictions: + + 1. The origin of this source code must not be misrepresented; you must not + claim that you wrote the original source code. If you use this source code + in a product, an acknowledgment in the product documentation would be + appreciated but is not required. + + 2. Altered source versions must be plainly marked as such, and must not be + misrepresented as being the original source code. + + 3. This notice may not be removed or altered from any source distribution. + + René Nyffenegger rene.nyffenegger@adp-gmbh.ch + +*/ + +#include "base64.h" +#include <string.h> + +static const std::string base64_chars = + "ABCDEFGHIJKLMNOPQRSTUVWXYZ" + "abcdefghijklmnopqrstuvwxyz" + "0123456789+/"; + + +static inline bool is_base64(unsigned char c) { + return (isalnum(c) || (c == '+') || (c == '/')); +} + +std::string base64_encode(const std::string& stringToEncode) +{ + const unsigned char* bytes_to_encode = reinterpret_cast<const unsigned char*> + (stringToEncode.size() > 0 ? &stringToEncode[0] : NULL); + unsigned int in_len = stringToEncode.size(); + + std::string ret; + int i = 0; + int j = 0; + unsigned char char_array_3[3]; + unsigned char char_array_4[4]; + + while (in_len--) { + char_array_3[i++] = *(bytes_to_encode++); + if (i == 3) { + char_array_4[0] = (char_array_3[0] & 0xfc) >> 2; + char_array_4[1] = ((char_array_3[0] & 0x03) << 4) + ((char_array_3[1] & 0xf0) >> 4); + char_array_4[2] = ((char_array_3[1] & 0x0f) << 2) + ((char_array_3[2] & 0xc0) >> 6); + char_array_4[3] = char_array_3[2] & 0x3f; + + for(i = 0; (i <4) ; i++) + ret += base64_chars[char_array_4[i]]; + i = 0; + } + } + + if (i) + { + for(j = i; j < 3; j++) + char_array_3[j] = '\0'; + + char_array_4[0] = (char_array_3[0] & 0xfc) >> 2; + char_array_4[1] = ((char_array_3[0] & 0x03) << 4) + ((char_array_3[1] & 0xf0) >> 4); + char_array_4[2] = ((char_array_3[1] & 0x0f) << 2) + ((char_array_3[2] & 0xc0) >> 6); + char_array_4[3] = char_array_3[2] & 0x3f; + + for (j = 0; (j < i + 1); j++) + ret += base64_chars[char_array_4[j]]; + + while((i++ < 3)) + ret += '='; + + } + + return ret; +} + + +std::string base64_decode(const std::string& encoded_string) { + int in_len = encoded_string.size(); + int i = 0; + int j = 0; + int in_ = 0; + unsigned char char_array_4[4], char_array_3[3]; + std::string ret; + + while (in_len-- && ( encoded_string[in_] != '=') && is_base64(encoded_string[in_])) { + char_array_4[i++] = encoded_string[in_]; in_++; + if (i ==4) { + for (i = 0; i <4; i++) + char_array_4[i] = base64_chars.find(char_array_4[i]); + + char_array_3[0] = (char_array_4[0] << 2) + ((char_array_4[1] & 0x30) >> 4); + char_array_3[1] = ((char_array_4[1] & 0xf) << 4) + ((char_array_4[2] & 0x3c) >> 2); + char_array_3[2] = ((char_array_4[2] & 0x3) << 6) + char_array_4[3]; + + for (i = 0; (i < 3); i++) + ret += char_array_3[i]; + i = 0; + } + } + + if (i) { + for (j = i; j <4; j++) + char_array_4[j] = 0; + + for (j = 0; j <4; j++) + char_array_4[j] = base64_chars.find(char_array_4[j]); + + char_array_3[0] = (char_array_4[0] << 2) + ((char_array_4[1] & 0x30) >> 4); + char_array_3[1] = ((char_array_4[1] & 0xf) << 4) + ((char_array_4[2] & 0x3c) >> 2); + char_array_3[2] = ((char_array_4[2] & 0x3) << 6) + char_array_4[3]; + + for (j = 0; (j < i - 1); j++) ret += char_array_3[j]; + } + + return ret; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/base64/base64.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,4 @@ +#include <string> + +std::string base64_encode(const std::string& stringToEncode); +std::string base64_decode(const std::string& s);
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/md5/md5.c Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,381 @@ +/* + Copyright (C) 1999, 2000, 2002 Aladdin Enterprises. All rights reserved. + + This software is provided 'as-is', without any express or implied + warranty. In no event will the authors be held liable for any damages + arising from the use of this software. + + Permission is granted to anyone to use this software for any purpose, + including commercial applications, and to alter it and redistribute it + freely, subject to the following restrictions: + + 1. The origin of this software must not be misrepresented; you must not + claim that you wrote the original software. If you use this software + in a product, an acknowledgment in the product documentation would be + appreciated but is not required. + 2. Altered source versions must be plainly marked as such, and must not be + misrepresented as being the original software. + 3. This notice may not be removed or altered from any source distribution. + + L. Peter Deutsch + ghost@aladdin.com + + */ +/* $Id: md5.c,v 1.6 2002/04/13 19:20:28 lpd Exp $ */ +/* + Independent implementation of MD5 (RFC 1321). + + This code implements the MD5 Algorithm defined in RFC 1321, whose + text is available at + http://www.ietf.org/rfc/rfc1321.txt + The code is derived from the text of the RFC, including the test suite + (section A.5) but excluding the rest of Appendix A. It does not include + any code or documentation that is identified in the RFC as being + copyrighted. + + The original and principal author of md5.c is L. Peter Deutsch + <ghost@aladdin.com>. Other authors are noted in the change history + that follows (in reverse chronological order): + + 2002-04-13 lpd Clarified derivation from RFC 1321; now handles byte order + either statically or dynamically; added missing #include <string.h> + in library. + 2002-03-11 lpd Corrected argument list for main(), and added int return + type, in test program and T value program. + 2002-02-21 lpd Added missing #include <stdio.h> in test program. + 2000-07-03 lpd Patched to eliminate warnings about "constant is + unsigned in ANSI C, signed in traditional"; made test program + self-checking. + 1999-11-04 lpd Edited comments slightly for automatic TOC extraction. + 1999-10-18 lpd Fixed typo in header comment (ansi2knr rather than md5). + 1999-05-03 lpd Original version. + */ + +#include "md5.h" +#include <string.h> + +#undef BYTE_ORDER /* 1 = big-endian, -1 = little-endian, 0 = unknown */ +#ifdef ARCH_IS_BIG_ENDIAN +# define BYTE_ORDER (ARCH_IS_BIG_ENDIAN ? 1 : -1) +#else +# define BYTE_ORDER 0 +#endif + +#define T_MASK ((md5_word_t)~0) +#define T1 /* 0xd76aa478 */ (T_MASK ^ 0x28955b87) +#define T2 /* 0xe8c7b756 */ (T_MASK ^ 0x173848a9) +#define T3 0x242070db +#define T4 /* 0xc1bdceee */ (T_MASK ^ 0x3e423111) +#define T5 /* 0xf57c0faf */ (T_MASK ^ 0x0a83f050) +#define T6 0x4787c62a +#define T7 /* 0xa8304613 */ (T_MASK ^ 0x57cfb9ec) +#define T8 /* 0xfd469501 */ (T_MASK ^ 0x02b96afe) +#define T9 0x698098d8 +#define T10 /* 0x8b44f7af */ (T_MASK ^ 0x74bb0850) +#define T11 /* 0xffff5bb1 */ (T_MASK ^ 0x0000a44e) +#define T12 /* 0x895cd7be */ (T_MASK ^ 0x76a32841) +#define T13 0x6b901122 +#define T14 /* 0xfd987193 */ (T_MASK ^ 0x02678e6c) +#define T15 /* 0xa679438e */ (T_MASK ^ 0x5986bc71) +#define T16 0x49b40821 +#define T17 /* 0xf61e2562 */ (T_MASK ^ 0x09e1da9d) +#define T18 /* 0xc040b340 */ (T_MASK ^ 0x3fbf4cbf) +#define T19 0x265e5a51 +#define T20 /* 0xe9b6c7aa */ (T_MASK ^ 0x16493855) +#define T21 /* 0xd62f105d */ (T_MASK ^ 0x29d0efa2) +#define T22 0x02441453 +#define T23 /* 0xd8a1e681 */ (T_MASK ^ 0x275e197e) +#define T24 /* 0xe7d3fbc8 */ (T_MASK ^ 0x182c0437) +#define T25 0x21e1cde6 +#define T26 /* 0xc33707d6 */ (T_MASK ^ 0x3cc8f829) +#define T27 /* 0xf4d50d87 */ (T_MASK ^ 0x0b2af278) +#define T28 0x455a14ed +#define T29 /* 0xa9e3e905 */ (T_MASK ^ 0x561c16fa) +#define T30 /* 0xfcefa3f8 */ (T_MASK ^ 0x03105c07) +#define T31 0x676f02d9 +#define T32 /* 0x8d2a4c8a */ (T_MASK ^ 0x72d5b375) +#define T33 /* 0xfffa3942 */ (T_MASK ^ 0x0005c6bd) +#define T34 /* 0x8771f681 */ (T_MASK ^ 0x788e097e) +#define T35 0x6d9d6122 +#define T36 /* 0xfde5380c */ (T_MASK ^ 0x021ac7f3) +#define T37 /* 0xa4beea44 */ (T_MASK ^ 0x5b4115bb) +#define T38 0x4bdecfa9 +#define T39 /* 0xf6bb4b60 */ (T_MASK ^ 0x0944b49f) +#define T40 /* 0xbebfbc70 */ (T_MASK ^ 0x4140438f) +#define T41 0x289b7ec6 +#define T42 /* 0xeaa127fa */ (T_MASK ^ 0x155ed805) +#define T43 /* 0xd4ef3085 */ (T_MASK ^ 0x2b10cf7a) +#define T44 0x04881d05 +#define T45 /* 0xd9d4d039 */ (T_MASK ^ 0x262b2fc6) +#define T46 /* 0xe6db99e5 */ (T_MASK ^ 0x1924661a) +#define T47 0x1fa27cf8 +#define T48 /* 0xc4ac5665 */ (T_MASK ^ 0x3b53a99a) +#define T49 /* 0xf4292244 */ (T_MASK ^ 0x0bd6ddbb) +#define T50 0x432aff97 +#define T51 /* 0xab9423a7 */ (T_MASK ^ 0x546bdc58) +#define T52 /* 0xfc93a039 */ (T_MASK ^ 0x036c5fc6) +#define T53 0x655b59c3 +#define T54 /* 0x8f0ccc92 */ (T_MASK ^ 0x70f3336d) +#define T55 /* 0xffeff47d */ (T_MASK ^ 0x00100b82) +#define T56 /* 0x85845dd1 */ (T_MASK ^ 0x7a7ba22e) +#define T57 0x6fa87e4f +#define T58 /* 0xfe2ce6e0 */ (T_MASK ^ 0x01d3191f) +#define T59 /* 0xa3014314 */ (T_MASK ^ 0x5cfebceb) +#define T60 0x4e0811a1 +#define T61 /* 0xf7537e82 */ (T_MASK ^ 0x08ac817d) +#define T62 /* 0xbd3af235 */ (T_MASK ^ 0x42c50dca) +#define T63 0x2ad7d2bb +#define T64 /* 0xeb86d391 */ (T_MASK ^ 0x14792c6e) + + +static void +md5_process(md5_state_t *pms, const md5_byte_t *data /*[64]*/) +{ + md5_word_t + a = pms->abcd[0], b = pms->abcd[1], + c = pms->abcd[2], d = pms->abcd[3]; + md5_word_t t; +#if BYTE_ORDER > 0 + /* Define storage only for big-endian CPUs. */ + md5_word_t X[16]; +#else + /* Define storage for little-endian or both types of CPUs. */ + md5_word_t xbuf[16]; + const md5_word_t *X; +#endif + + { +#if BYTE_ORDER == 0 + /* + * Determine dynamically whether this is a big-endian or + * little-endian machine, since we can use a more efficient + * algorithm on the latter. + */ + static const int w = 1; + + if (*((const md5_byte_t *)&w)) /* dynamic little-endian */ +#endif +#if BYTE_ORDER <= 0 /* little-endian */ + { + /* + * On little-endian machines, we can process properly aligned + * data without copying it. + */ + if (!((data - (const md5_byte_t *)0) & 3)) { + /* data are properly aligned */ + X = (const md5_word_t *)data; + } else { + /* not aligned */ + memcpy(xbuf, data, 64); + X = xbuf; + } + } +#endif +#if BYTE_ORDER == 0 + else /* dynamic big-endian */ +#endif +#if BYTE_ORDER >= 0 /* big-endian */ + { + /* + * On big-endian machines, we must arrange the bytes in the + * right order. + */ + const md5_byte_t *xp = data; + int i; + +# if BYTE_ORDER == 0 + X = xbuf; /* (dynamic only) */ +# else +# define xbuf X /* (static only) */ +# endif + for (i = 0; i < 16; ++i, xp += 4) + xbuf[i] = xp[0] + (xp[1] << 8) + (xp[2] << 16) + (xp[3] << 24); + } +#endif + } + +#define ROTATE_LEFT(x, n) (((x) << (n)) | ((x) >> (32 - (n)))) + + /* Round 1. */ + /* Let [abcd k s i] denote the operation + a = b + ((a + F(b,c,d) + X[k] + T[i]) <<< s). */ +#define F(x, y, z) (((x) & (y)) | (~(x) & (z))) +#define SET(a, b, c, d, k, s, Ti)\ + t = a + F(b,c,d) + X[k] + Ti;\ + a = ROTATE_LEFT(t, s) + b + /* Do the following 16 operations. */ + SET(a, b, c, d, 0, 7, T1); + SET(d, a, b, c, 1, 12, T2); + SET(c, d, a, b, 2, 17, T3); + SET(b, c, d, a, 3, 22, T4); + SET(a, b, c, d, 4, 7, T5); + SET(d, a, b, c, 5, 12, T6); + SET(c, d, a, b, 6, 17, T7); + SET(b, c, d, a, 7, 22, T8); + SET(a, b, c, d, 8, 7, T9); + SET(d, a, b, c, 9, 12, T10); + SET(c, d, a, b, 10, 17, T11); + SET(b, c, d, a, 11, 22, T12); + SET(a, b, c, d, 12, 7, T13); + SET(d, a, b, c, 13, 12, T14); + SET(c, d, a, b, 14, 17, T15); + SET(b, c, d, a, 15, 22, T16); +#undef SET + + /* Round 2. */ + /* Let [abcd k s i] denote the operation + a = b + ((a + G(b,c,d) + X[k] + T[i]) <<< s). */ +#define G(x, y, z) (((x) & (z)) | ((y) & ~(z))) +#define SET(a, b, c, d, k, s, Ti)\ + t = a + G(b,c,d) + X[k] + Ti;\ + a = ROTATE_LEFT(t, s) + b + /* Do the following 16 operations. */ + SET(a, b, c, d, 1, 5, T17); + SET(d, a, b, c, 6, 9, T18); + SET(c, d, a, b, 11, 14, T19); + SET(b, c, d, a, 0, 20, T20); + SET(a, b, c, d, 5, 5, T21); + SET(d, a, b, c, 10, 9, T22); + SET(c, d, a, b, 15, 14, T23); + SET(b, c, d, a, 4, 20, T24); + SET(a, b, c, d, 9, 5, T25); + SET(d, a, b, c, 14, 9, T26); + SET(c, d, a, b, 3, 14, T27); + SET(b, c, d, a, 8, 20, T28); + SET(a, b, c, d, 13, 5, T29); + SET(d, a, b, c, 2, 9, T30); + SET(c, d, a, b, 7, 14, T31); + SET(b, c, d, a, 12, 20, T32); +#undef SET + + /* Round 3. */ + /* Let [abcd k s t] denote the operation + a = b + ((a + H(b,c,d) + X[k] + T[i]) <<< s). */ +#define H(x, y, z) ((x) ^ (y) ^ (z)) +#define SET(a, b, c, d, k, s, Ti)\ + t = a + H(b,c,d) + X[k] + Ti;\ + a = ROTATE_LEFT(t, s) + b + /* Do the following 16 operations. */ + SET(a, b, c, d, 5, 4, T33); + SET(d, a, b, c, 8, 11, T34); + SET(c, d, a, b, 11, 16, T35); + SET(b, c, d, a, 14, 23, T36); + SET(a, b, c, d, 1, 4, T37); + SET(d, a, b, c, 4, 11, T38); + SET(c, d, a, b, 7, 16, T39); + SET(b, c, d, a, 10, 23, T40); + SET(a, b, c, d, 13, 4, T41); + SET(d, a, b, c, 0, 11, T42); + SET(c, d, a, b, 3, 16, T43); + SET(b, c, d, a, 6, 23, T44); + SET(a, b, c, d, 9, 4, T45); + SET(d, a, b, c, 12, 11, T46); + SET(c, d, a, b, 15, 16, T47); + SET(b, c, d, a, 2, 23, T48); +#undef SET + + /* Round 4. */ + /* Let [abcd k s t] denote the operation + a = b + ((a + I(b,c,d) + X[k] + T[i]) <<< s). */ +#define I(x, y, z) ((y) ^ ((x) | ~(z))) +#define SET(a, b, c, d, k, s, Ti)\ + t = a + I(b,c,d) + X[k] + Ti;\ + a = ROTATE_LEFT(t, s) + b + /* Do the following 16 operations. */ + SET(a, b, c, d, 0, 6, T49); + SET(d, a, b, c, 7, 10, T50); + SET(c, d, a, b, 14, 15, T51); + SET(b, c, d, a, 5, 21, T52); + SET(a, b, c, d, 12, 6, T53); + SET(d, a, b, c, 3, 10, T54); + SET(c, d, a, b, 10, 15, T55); + SET(b, c, d, a, 1, 21, T56); + SET(a, b, c, d, 8, 6, T57); + SET(d, a, b, c, 15, 10, T58); + SET(c, d, a, b, 6, 15, T59); + SET(b, c, d, a, 13, 21, T60); + SET(a, b, c, d, 4, 6, T61); + SET(d, a, b, c, 11, 10, T62); + SET(c, d, a, b, 2, 15, T63); + SET(b, c, d, a, 9, 21, T64); +#undef SET + + /* Then perform the following additions. (That is increment each + of the four registers by the value it had before this block + was started.) */ + pms->abcd[0] += a; + pms->abcd[1] += b; + pms->abcd[2] += c; + pms->abcd[3] += d; +} + +void +md5_init(md5_state_t *pms) +{ + pms->count[0] = pms->count[1] = 0; + pms->abcd[0] = 0x67452301; + pms->abcd[1] = /*0xefcdab89*/ T_MASK ^ 0x10325476; + pms->abcd[2] = /*0x98badcfe*/ T_MASK ^ 0x67452301; + pms->abcd[3] = 0x10325476; +} + +void +md5_append(md5_state_t *pms, const md5_byte_t *data, int nbytes) +{ + const md5_byte_t *p = data; + int left = nbytes; + int offset = (pms->count[0] >> 3) & 63; + md5_word_t nbits = (md5_word_t)(nbytes << 3); + + if (nbytes <= 0) + return; + + /* Update the message length. */ + pms->count[1] += nbytes >> 29; + pms->count[0] += nbits; + if (pms->count[0] < nbits) + pms->count[1]++; + + /* Process an initial partial block. */ + if (offset) { + int copy = (offset + nbytes > 64 ? 64 - offset : nbytes); + + memcpy(pms->buf + offset, p, copy); + if (offset + copy < 64) + return; + p += copy; + left -= copy; + md5_process(pms, pms->buf); + } + + /* Process full blocks. */ + for (; left >= 64; p += 64, left -= 64) + md5_process(pms, p); + + /* Process a final partial block. */ + if (left) + memcpy(pms->buf, p, left); +} + +void +md5_finish(md5_state_t *pms, md5_byte_t digest[16]) +{ + static const md5_byte_t pad[64] = { + 0x80, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, + 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0 + }; + md5_byte_t data[8]; + int i; + + /* Save the length before padding. */ + for (i = 0; i < 8; ++i) + data[i] = (md5_byte_t)(pms->count[i >> 2] >> ((i & 3) << 3)); + /* Pad to 56 bytes mod 64. */ + md5_append(pms, pad, ((55 - (pms->count[0] >> 3)) & 63) + 1); + /* Append the length. */ + md5_append(pms, data, 8); + for (i = 0; i < 16; ++i) + digest[i] = (md5_byte_t)(pms->abcd[i >> 2] >> ((i & 3) << 3)); +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/md5/md5.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,91 @@ +/* + Copyright (C) 1999, 2002 Aladdin Enterprises. All rights reserved. + + This software is provided 'as-is', without any express or implied + warranty. In no event will the authors be held liable for any damages + arising from the use of this software. + + Permission is granted to anyone to use this software for any purpose, + including commercial applications, and to alter it and redistribute it + freely, subject to the following restrictions: + + 1. The origin of this software must not be misrepresented; you must not + claim that you wrote the original software. If you use this software + in a product, an acknowledgment in the product documentation would be + appreciated but is not required. + 2. Altered source versions must be plainly marked as such, and must not be + misrepresented as being the original software. + 3. This notice may not be removed or altered from any source distribution. + + L. Peter Deutsch + ghost@aladdin.com + + */ +/* $Id: md5.h,v 1.4 2002/04/13 19:20:28 lpd Exp $ */ +/* + Independent implementation of MD5 (RFC 1321). + + This code implements the MD5 Algorithm defined in RFC 1321, whose + text is available at + http://www.ietf.org/rfc/rfc1321.txt + The code is derived from the text of the RFC, including the test suite + (section A.5) but excluding the rest of Appendix A. It does not include + any code or documentation that is identified in the RFC as being + copyrighted. + + The original and principal author of md5.h is L. Peter Deutsch + <ghost@aladdin.com>. Other authors are noted in the change history + that follows (in reverse chronological order): + + 2002-04-13 lpd Removed support for non-ANSI compilers; removed + references to Ghostscript; clarified derivation from RFC 1321; + now handles byte order either statically or dynamically. + 1999-11-04 lpd Edited comments slightly for automatic TOC extraction. + 1999-10-18 lpd Fixed typo in header comment (ansi2knr rather than md5); + added conditionalization for C++ compilation from Martin + Purschke <purschke@bnl.gov>. + 1999-05-03 lpd Original version. + */ + +#ifndef md5_INCLUDED +# define md5_INCLUDED + +/* + * This package supports both compile-time and run-time determination of CPU + * byte order. If ARCH_IS_BIG_ENDIAN is defined as 0, the code will be + * compiled to run only on little-endian CPUs; if ARCH_IS_BIG_ENDIAN is + * defined as non-zero, the code will be compiled to run only on big-endian + * CPUs; if ARCH_IS_BIG_ENDIAN is not defined, the code will be compiled to + * run on either big- or little-endian CPUs, but will run slightly less + * efficiently on either one than if ARCH_IS_BIG_ENDIAN is defined. + */ + +typedef unsigned char md5_byte_t; /* 8-bit byte */ +typedef unsigned int md5_word_t; /* 32-bit word */ + +/* Define the state of the MD5 Algorithm. */ +typedef struct md5_state_s { + md5_word_t count[2]; /* message length in bits, lsw first */ + md5_word_t abcd[4]; /* digest buffer */ + md5_byte_t buf[64]; /* accumulate block */ +} md5_state_t; + +#ifdef __cplusplus +extern "C" +{ +#endif + +/* Initialize the algorithm. */ +void md5_init(md5_state_t *pms); + +/* Append a string to the message. */ +void md5_append(md5_state_t *pms, const md5_byte_t *data, int nbytes); + +/* Finish the message and return the digest. */ +void md5_finish(md5_state_t *pms, md5_byte_t digest[16]); + +#ifdef __cplusplus +} /* end extern "C" */ +#endif + +#endif /* md5_INCLUDED */
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/minizip/NOTES Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,1 @@ +These files come from the "contrib/minizip" directory in zlib 1.2.7.
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/minizip/crypt.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,131 @@ +/* crypt.h -- base code for crypt/uncrypt ZIPfile + + + Version 1.01e, February 12th, 2005 + + Copyright (C) 1998-2005 Gilles Vollant + + This code is a modified version of crypting code in Infozip distribution + + The encryption/decryption parts of this source code (as opposed to the + non-echoing password parts) were originally written in Europe. The + whole source package can be freely distributed, including from the USA. + (Prior to January 2000, re-export from the US was a violation of US law.) + + This encryption code is a direct transcription of the algorithm from + Roger Schlafly, described by Phil Katz in the file appnote.txt. This + file (appnote.txt) is distributed with the PKZIP program (even in the + version without encryption capabilities). + + If you don't need crypting in your application, just define symbols + NOCRYPT and NOUNCRYPT. + + This code support the "Traditional PKWARE Encryption". + + The new AES encryption added on Zip format by Winzip (see the page + http://www.winzip.com/aes_info.htm ) and PKWare PKZip 5.x Strong + Encryption is not supported. +*/ + +#define CRC32(c, b) ((*(pcrc_32_tab+(((int)(c) ^ (b)) & 0xff))) ^ ((c) >> 8)) + +/*********************************************************************** + * Return the next byte in the pseudo-random sequence + */ +static int decrypt_byte(unsigned long* pkeys, const unsigned long* pcrc_32_tab) +{ + unsigned temp; /* POTENTIAL BUG: temp*(temp^1) may overflow in an + * unpredictable manner on 16-bit systems; not a problem + * with any known compiler so far, though */ + + temp = ((unsigned)(*(pkeys+2)) & 0xffff) | 2; + return (int)(((temp * (temp ^ 1)) >> 8) & 0xff); +} + +/*********************************************************************** + * Update the encryption keys with the next byte of plain text + */ +static int update_keys(unsigned long* pkeys,const unsigned long* pcrc_32_tab,int c) +{ + (*(pkeys+0)) = CRC32((*(pkeys+0)), c); + (*(pkeys+1)) += (*(pkeys+0)) & 0xff; + (*(pkeys+1)) = (*(pkeys+1)) * 134775813L + 1; + { + register int keyshift = (int)((*(pkeys+1)) >> 24); + (*(pkeys+2)) = CRC32((*(pkeys+2)), keyshift); + } + return c; +} + + +/*********************************************************************** + * Initialize the encryption keys and the random header according to + * the given password. + */ +static void init_keys(const char* passwd,unsigned long* pkeys,const unsigned long* pcrc_32_tab) +{ + *(pkeys+0) = 305419896L; + *(pkeys+1) = 591751049L; + *(pkeys+2) = 878082192L; + while (*passwd != '\0') { + update_keys(pkeys,pcrc_32_tab,(int)*passwd); + passwd++; + } +} + +#define zdecode(pkeys,pcrc_32_tab,c) \ + (update_keys(pkeys,pcrc_32_tab,c ^= decrypt_byte(pkeys,pcrc_32_tab))) + +#define zencode(pkeys,pcrc_32_tab,c,t) \ + (t=decrypt_byte(pkeys,pcrc_32_tab), update_keys(pkeys,pcrc_32_tab,c), t^(c)) + +#ifdef INCLUDECRYPTINGCODE_IFCRYPTALLOWED + +#define RAND_HEAD_LEN 12 + /* "last resort" source for second part of crypt seed pattern */ +# ifndef ZCR_SEED2 +# define ZCR_SEED2 3141592654UL /* use PI as default pattern */ +# endif + +static int crypthead(const char* passwd, /* password string */ + unsigned char* buf, /* where to write header */ + int bufSize, + unsigned long* pkeys, + const unsigned long* pcrc_32_tab, + unsigned long crcForCrypting) +{ + int n; /* index in random header */ + int t; /* temporary */ + int c; /* random byte */ + unsigned char header[RAND_HEAD_LEN-2]; /* random header */ + static unsigned calls = 0; /* ensure different random header each time */ + + if (bufSize<RAND_HEAD_LEN) + return 0; + + /* First generate RAND_HEAD_LEN-2 random bytes. We encrypt the + * output of rand() to get less predictability, since rand() is + * often poorly implemented. + */ + if (++calls == 1) + { + srand((unsigned)(time(NULL) ^ ZCR_SEED2)); + } + init_keys(passwd, pkeys, pcrc_32_tab); + for (n = 0; n < RAND_HEAD_LEN-2; n++) + { + c = (rand() >> 7) & 0xff; + header[n] = (unsigned char)zencode(pkeys, pcrc_32_tab, c, t); + } + /* Encrypt random header (last two bytes is high word of crc) */ + init_keys(passwd, pkeys, pcrc_32_tab); + for (n = 0; n < RAND_HEAD_LEN-2; n++) + { + buf[n] = (unsigned char)zencode(pkeys, pcrc_32_tab, header[n], t); + } + buf[n++] = (unsigned char)zencode(pkeys, pcrc_32_tab, (int)(crcForCrypting >> 16) & 0xff, t); + buf[n++] = (unsigned char)zencode(pkeys, pcrc_32_tab, (int)(crcForCrypting >> 24) & 0xff, t); + return n; +} + +#endif
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/minizip/ioapi.c Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,247 @@ +/* ioapi.h -- IO base function header for compress/uncompress .zip + part of the MiniZip project - ( http://www.winimage.com/zLibDll/minizip.html ) + + Copyright (C) 1998-2010 Gilles Vollant (minizip) ( http://www.winimage.com/zLibDll/minizip.html ) + + Modifications for Zip64 support + Copyright (C) 2009-2010 Mathias Svensson ( http://result42.com ) + + For more info read MiniZip_info.txt + +*/ + +#if defined(_WIN32) && (!(defined(_CRT_SECURE_NO_WARNINGS))) + #define _CRT_SECURE_NO_WARNINGS +#endif + +#if defined(__APPLE__) || defined(IOAPI_NO_64) +// In darwin and perhaps other BSD variants off_t is a 64 bit value, hence no need for specific 64 bit functions +#define FOPEN_FUNC(filename, mode) fopen(filename, mode) +#define FTELLO_FUNC(stream) ftello(stream) +#define FSEEKO_FUNC(stream, offset, origin) fseeko(stream, offset, origin) +#else +#define FOPEN_FUNC(filename, mode) fopen64(filename, mode) +#define FTELLO_FUNC(stream) ftello64(stream) +#define FSEEKO_FUNC(stream, offset, origin) fseeko64(stream, offset, origin) +#endif + + +#include "ioapi.h" + +voidpf call_zopen64 (const zlib_filefunc64_32_def* pfilefunc,const void*filename,int mode) +{ + if (pfilefunc->zfile_func64.zopen64_file != NULL) + return (*(pfilefunc->zfile_func64.zopen64_file)) (pfilefunc->zfile_func64.opaque,filename,mode); + else + { + return (*(pfilefunc->zopen32_file))(pfilefunc->zfile_func64.opaque,(const char*)filename,mode); + } +} + +long call_zseek64 (const zlib_filefunc64_32_def* pfilefunc,voidpf filestream, ZPOS64_T offset, int origin) +{ + if (pfilefunc->zfile_func64.zseek64_file != NULL) + return (*(pfilefunc->zfile_func64.zseek64_file)) (pfilefunc->zfile_func64.opaque,filestream,offset,origin); + else + { + uLong offsetTruncated = (uLong)offset; + if (offsetTruncated != offset) + return -1; + else + return (*(pfilefunc->zseek32_file))(pfilefunc->zfile_func64.opaque,filestream,offsetTruncated,origin); + } +} + +ZPOS64_T call_ztell64 (const zlib_filefunc64_32_def* pfilefunc,voidpf filestream) +{ + if (pfilefunc->zfile_func64.zseek64_file != NULL) + return (*(pfilefunc->zfile_func64.ztell64_file)) (pfilefunc->zfile_func64.opaque,filestream); + else + { + uLong tell_uLong = (*(pfilefunc->ztell32_file))(pfilefunc->zfile_func64.opaque,filestream); + if ((tell_uLong) == MAXU32) + return (ZPOS64_T)-1; + else + return tell_uLong; + } +} + +void fill_zlib_filefunc64_32_def_from_filefunc32(zlib_filefunc64_32_def* p_filefunc64_32,const zlib_filefunc_def* p_filefunc32) +{ + p_filefunc64_32->zfile_func64.zopen64_file = NULL; + p_filefunc64_32->zopen32_file = p_filefunc32->zopen_file; + p_filefunc64_32->zfile_func64.zerror_file = p_filefunc32->zerror_file; + p_filefunc64_32->zfile_func64.zread_file = p_filefunc32->zread_file; + p_filefunc64_32->zfile_func64.zwrite_file = p_filefunc32->zwrite_file; + p_filefunc64_32->zfile_func64.ztell64_file = NULL; + p_filefunc64_32->zfile_func64.zseek64_file = NULL; + p_filefunc64_32->zfile_func64.zclose_file = p_filefunc32->zclose_file; + p_filefunc64_32->zfile_func64.zerror_file = p_filefunc32->zerror_file; + p_filefunc64_32->zfile_func64.opaque = p_filefunc32->opaque; + p_filefunc64_32->zseek32_file = p_filefunc32->zseek_file; + p_filefunc64_32->ztell32_file = p_filefunc32->ztell_file; +} + + + +static voidpf ZCALLBACK fopen_file_func OF((voidpf opaque, const char* filename, int mode)); +static uLong ZCALLBACK fread_file_func OF((voidpf opaque, voidpf stream, void* buf, uLong size)); +static uLong ZCALLBACK fwrite_file_func OF((voidpf opaque, voidpf stream, const void* buf,uLong size)); +static ZPOS64_T ZCALLBACK ftell64_file_func OF((voidpf opaque, voidpf stream)); +static long ZCALLBACK fseek64_file_func OF((voidpf opaque, voidpf stream, ZPOS64_T offset, int origin)); +static int ZCALLBACK fclose_file_func OF((voidpf opaque, voidpf stream)); +static int ZCALLBACK ferror_file_func OF((voidpf opaque, voidpf stream)); + +static voidpf ZCALLBACK fopen_file_func (voidpf opaque, const char* filename, int mode) +{ + FILE* file = NULL; + const char* mode_fopen = NULL; + if ((mode & ZLIB_FILEFUNC_MODE_READWRITEFILTER)==ZLIB_FILEFUNC_MODE_READ) + mode_fopen = "rb"; + else + if (mode & ZLIB_FILEFUNC_MODE_EXISTING) + mode_fopen = "r+b"; + else + if (mode & ZLIB_FILEFUNC_MODE_CREATE) + mode_fopen = "wb"; + + if ((filename!=NULL) && (mode_fopen != NULL)) + file = fopen(filename, mode_fopen); + return file; +} + +static voidpf ZCALLBACK fopen64_file_func (voidpf opaque, const void* filename, int mode) +{ + FILE* file = NULL; + const char* mode_fopen = NULL; + if ((mode & ZLIB_FILEFUNC_MODE_READWRITEFILTER)==ZLIB_FILEFUNC_MODE_READ) + mode_fopen = "rb"; + else + if (mode & ZLIB_FILEFUNC_MODE_EXISTING) + mode_fopen = "r+b"; + else + if (mode & ZLIB_FILEFUNC_MODE_CREATE) + mode_fopen = "wb"; + + if ((filename!=NULL) && (mode_fopen != NULL)) + file = FOPEN_FUNC((const char*)filename, mode_fopen); + return file; +} + + +static uLong ZCALLBACK fread_file_func (voidpf opaque, voidpf stream, void* buf, uLong size) +{ + uLong ret; + ret = (uLong)fread(buf, 1, (size_t)size, (FILE *)stream); + return ret; +} + +static uLong ZCALLBACK fwrite_file_func (voidpf opaque, voidpf stream, const void* buf, uLong size) +{ + uLong ret; + ret = (uLong)fwrite(buf, 1, (size_t)size, (FILE *)stream); + return ret; +} + +static long ZCALLBACK ftell_file_func (voidpf opaque, voidpf stream) +{ + long ret; + ret = ftell((FILE *)stream); + return ret; +} + + +static ZPOS64_T ZCALLBACK ftell64_file_func (voidpf opaque, voidpf stream) +{ + ZPOS64_T ret; + ret = FTELLO_FUNC((FILE *)stream); + return ret; +} + +static long ZCALLBACK fseek_file_func (voidpf opaque, voidpf stream, uLong offset, int origin) +{ + int fseek_origin=0; + long ret; + switch (origin) + { + case ZLIB_FILEFUNC_SEEK_CUR : + fseek_origin = SEEK_CUR; + break; + case ZLIB_FILEFUNC_SEEK_END : + fseek_origin = SEEK_END; + break; + case ZLIB_FILEFUNC_SEEK_SET : + fseek_origin = SEEK_SET; + break; + default: return -1; + } + ret = 0; + if (fseek((FILE *)stream, offset, fseek_origin) != 0) + ret = -1; + return ret; +} + +static long ZCALLBACK fseek64_file_func (voidpf opaque, voidpf stream, ZPOS64_T offset, int origin) +{ + int fseek_origin=0; + long ret; + switch (origin) + { + case ZLIB_FILEFUNC_SEEK_CUR : + fseek_origin = SEEK_CUR; + break; + case ZLIB_FILEFUNC_SEEK_END : + fseek_origin = SEEK_END; + break; + case ZLIB_FILEFUNC_SEEK_SET : + fseek_origin = SEEK_SET; + break; + default: return -1; + } + ret = 0; + + if(FSEEKO_FUNC((FILE *)stream, offset, fseek_origin) != 0) + ret = -1; + + return ret; +} + + +static int ZCALLBACK fclose_file_func (voidpf opaque, voidpf stream) +{ + int ret; + ret = fclose((FILE *)stream); + return ret; +} + +static int ZCALLBACK ferror_file_func (voidpf opaque, voidpf stream) +{ + int ret; + ret = ferror((FILE *)stream); + return ret; +} + +void fill_fopen_filefunc (pzlib_filefunc_def) + zlib_filefunc_def* pzlib_filefunc_def; +{ + pzlib_filefunc_def->zopen_file = fopen_file_func; + pzlib_filefunc_def->zread_file = fread_file_func; + pzlib_filefunc_def->zwrite_file = fwrite_file_func; + pzlib_filefunc_def->ztell_file = ftell_file_func; + pzlib_filefunc_def->zseek_file = fseek_file_func; + pzlib_filefunc_def->zclose_file = fclose_file_func; + pzlib_filefunc_def->zerror_file = ferror_file_func; + pzlib_filefunc_def->opaque = NULL; +} + +void fill_fopen64_filefunc (zlib_filefunc64_def* pzlib_filefunc_def) +{ + pzlib_filefunc_def->zopen64_file = fopen64_file_func; + pzlib_filefunc_def->zread_file = fread_file_func; + pzlib_filefunc_def->zwrite_file = fwrite_file_func; + pzlib_filefunc_def->ztell64_file = ftell64_file_func; + pzlib_filefunc_def->zseek64_file = fseek64_file_func; + pzlib_filefunc_def->zclose_file = fclose_file_func; + pzlib_filefunc_def->zerror_file = ferror_file_func; + pzlib_filefunc_def->opaque = NULL; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/minizip/ioapi.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,208 @@ +/* ioapi.h -- IO base function header for compress/uncompress .zip + part of the MiniZip project - ( http://www.winimage.com/zLibDll/minizip.html ) + + Copyright (C) 1998-2010 Gilles Vollant (minizip) ( http://www.winimage.com/zLibDll/minizip.html ) + + Modifications for Zip64 support + Copyright (C) 2009-2010 Mathias Svensson ( http://result42.com ) + + For more info read MiniZip_info.txt + + Changes + + Oct-2009 - Defined ZPOS64_T to fpos_t on windows and u_int64_t on linux. (might need to find a better why for this) + Oct-2009 - Change to fseeko64, ftello64 and fopen64 so large files would work on linux. + More if/def section may be needed to support other platforms + Oct-2009 - Defined fxxxx64 calls to normal fopen/ftell/fseek so they would compile on windows. + (but you should use iowin32.c for windows instead) + +*/ + +#ifndef _ZLIBIOAPI64_H +#define _ZLIBIOAPI64_H + +#if (!defined(_WIN32)) && (!defined(WIN32)) && (!defined(__APPLE__)) + + // Linux needs this to support file operation on files larger then 4+GB + // But might need better if/def to select just the platforms that needs them. + + #ifndef __USE_FILE_OFFSET64 + #define __USE_FILE_OFFSET64 + #endif + #ifndef __USE_LARGEFILE64 + #define __USE_LARGEFILE64 + #endif + #ifndef _LARGEFILE64_SOURCE + #define _LARGEFILE64_SOURCE + #endif + #ifndef _FILE_OFFSET_BIT + #define _FILE_OFFSET_BIT 64 + #endif + +#endif + +#include <stdio.h> +#include <stdlib.h> +#include "zlib.h" + +#if defined(USE_FILE32API) +#define fopen64 fopen +#define ftello64 ftell +#define fseeko64 fseek +#else +#ifdef __FreeBSD__ +#define fopen64 fopen +#define ftello64 ftello +#define fseeko64 fseeko +#endif +#ifdef _MSC_VER + #define fopen64 fopen + #if (_MSC_VER >= 1400) && (!(defined(NO_MSCVER_FILE64_FUNC))) + #define ftello64 _ftelli64 + #define fseeko64 _fseeki64 + #else // old MSC + #define ftello64 ftell + #define fseeko64 fseek + #endif +#endif +#endif + +/* +#ifndef ZPOS64_T + #ifdef _WIN32 + #define ZPOS64_T fpos_t + #else + #include <stdint.h> + #define ZPOS64_T uint64_t + #endif +#endif +*/ + +#ifdef HAVE_MINIZIP64_CONF_H +#include "mz64conf.h" +#endif + +/* a type choosen by DEFINE */ +#ifdef HAVE_64BIT_INT_CUSTOM +typedef 64BIT_INT_CUSTOM_TYPE ZPOS64_T; +#else +#ifdef HAS_STDINT_H +#include "stdint.h" +typedef uint64_t ZPOS64_T; +#else + +/* Maximum unsigned 32-bit value used as placeholder for zip64 */ +#define MAXU32 0xffffffff + +#if defined(_MSC_VER) || defined(__BORLANDC__) +typedef unsigned __int64 ZPOS64_T; +#else +typedef unsigned long long int ZPOS64_T; +#endif +#endif +#endif + + + +#ifdef __cplusplus +extern "C" { +#endif + + +#define ZLIB_FILEFUNC_SEEK_CUR (1) +#define ZLIB_FILEFUNC_SEEK_END (2) +#define ZLIB_FILEFUNC_SEEK_SET (0) + +#define ZLIB_FILEFUNC_MODE_READ (1) +#define ZLIB_FILEFUNC_MODE_WRITE (2) +#define ZLIB_FILEFUNC_MODE_READWRITEFILTER (3) + +#define ZLIB_FILEFUNC_MODE_EXISTING (4) +#define ZLIB_FILEFUNC_MODE_CREATE (8) + + +#ifndef ZCALLBACK + #if (defined(WIN32) || defined(_WIN32) || defined (WINDOWS) || defined (_WINDOWS)) && defined(CALLBACK) && defined (USEWINDOWS_CALLBACK) + #define ZCALLBACK CALLBACK + #else + #define ZCALLBACK + #endif +#endif + + + + +typedef voidpf (ZCALLBACK *open_file_func) OF((voidpf opaque, const char* filename, int mode)); +typedef uLong (ZCALLBACK *read_file_func) OF((voidpf opaque, voidpf stream, void* buf, uLong size)); +typedef uLong (ZCALLBACK *write_file_func) OF((voidpf opaque, voidpf stream, const void* buf, uLong size)); +typedef int (ZCALLBACK *close_file_func) OF((voidpf opaque, voidpf stream)); +typedef int (ZCALLBACK *testerror_file_func) OF((voidpf opaque, voidpf stream)); + +typedef long (ZCALLBACK *tell_file_func) OF((voidpf opaque, voidpf stream)); +typedef long (ZCALLBACK *seek_file_func) OF((voidpf opaque, voidpf stream, uLong offset, int origin)); + + +/* here is the "old" 32 bits structure structure */ +typedef struct zlib_filefunc_def_s +{ + open_file_func zopen_file; + read_file_func zread_file; + write_file_func zwrite_file; + tell_file_func ztell_file; + seek_file_func zseek_file; + close_file_func zclose_file; + testerror_file_func zerror_file; + voidpf opaque; +} zlib_filefunc_def; + +typedef ZPOS64_T (ZCALLBACK *tell64_file_func) OF((voidpf opaque, voidpf stream)); +typedef long (ZCALLBACK *seek64_file_func) OF((voidpf opaque, voidpf stream, ZPOS64_T offset, int origin)); +typedef voidpf (ZCALLBACK *open64_file_func) OF((voidpf opaque, const void* filename, int mode)); + +typedef struct zlib_filefunc64_def_s +{ + open64_file_func zopen64_file; + read_file_func zread_file; + write_file_func zwrite_file; + tell64_file_func ztell64_file; + seek64_file_func zseek64_file; + close_file_func zclose_file; + testerror_file_func zerror_file; + voidpf opaque; +} zlib_filefunc64_def; + +void fill_fopen64_filefunc OF((zlib_filefunc64_def* pzlib_filefunc_def)); +void fill_fopen_filefunc OF((zlib_filefunc_def* pzlib_filefunc_def)); + +/* now internal definition, only for zip.c and unzip.h */ +typedef struct zlib_filefunc64_32_def_s +{ + zlib_filefunc64_def zfile_func64; + open_file_func zopen32_file; + tell_file_func ztell32_file; + seek_file_func zseek32_file; +} zlib_filefunc64_32_def; + + +#define ZREAD64(filefunc,filestream,buf,size) ((*((filefunc).zfile_func64.zread_file)) ((filefunc).zfile_func64.opaque,filestream,buf,size)) +#define ZWRITE64(filefunc,filestream,buf,size) ((*((filefunc).zfile_func64.zwrite_file)) ((filefunc).zfile_func64.opaque,filestream,buf,size)) +//#define ZTELL64(filefunc,filestream) ((*((filefunc).ztell64_file)) ((filefunc).opaque,filestream)) +//#define ZSEEK64(filefunc,filestream,pos,mode) ((*((filefunc).zseek64_file)) ((filefunc).opaque,filestream,pos,mode)) +#define ZCLOSE64(filefunc,filestream) ((*((filefunc).zfile_func64.zclose_file)) ((filefunc).zfile_func64.opaque,filestream)) +#define ZERROR64(filefunc,filestream) ((*((filefunc).zfile_func64.zerror_file)) ((filefunc).zfile_func64.opaque,filestream)) + +voidpf call_zopen64 OF((const zlib_filefunc64_32_def* pfilefunc,const void*filename,int mode)); +long call_zseek64 OF((const zlib_filefunc64_32_def* pfilefunc,voidpf filestream, ZPOS64_T offset, int origin)); +ZPOS64_T call_ztell64 OF((const zlib_filefunc64_32_def* pfilefunc,voidpf filestream)); + +void fill_zlib_filefunc64_32_def_from_filefunc32(zlib_filefunc64_32_def* p_filefunc64_32,const zlib_filefunc_def* p_filefunc32); + +#define ZOPEN64(filefunc,filename,mode) (call_zopen64((&(filefunc)),(filename),(mode))) +#define ZTELL64(filefunc,filestream) (call_ztell64((&(filefunc)),(filestream))) +#define ZSEEK64(filefunc,filestream,pos,mode) (call_zseek64((&(filefunc)),(filestream),(pos),(mode))) + +#ifdef __cplusplus +} +#endif + +#endif
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/minizip/zip.c Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,2007 @@ +/* zip.c -- IO on .zip files using zlib + Version 1.1, February 14h, 2010 + part of the MiniZip project - ( http://www.winimage.com/zLibDll/minizip.html ) + + Copyright (C) 1998-2010 Gilles Vollant (minizip) ( http://www.winimage.com/zLibDll/minizip.html ) + + Modifications for Zip64 support + Copyright (C) 2009-2010 Mathias Svensson ( http://result42.com ) + + For more info read MiniZip_info.txt + + Changes + Oct-2009 - Mathias Svensson - Remove old C style function prototypes + Oct-2009 - Mathias Svensson - Added Zip64 Support when creating new file archives + Oct-2009 - Mathias Svensson - Did some code cleanup and refactoring to get better overview of some functions. + Oct-2009 - Mathias Svensson - Added zipRemoveExtraInfoBlock to strip extra field data from its ZIP64 data + It is used when recreting zip archive with RAW when deleting items from a zip. + ZIP64 data is automaticly added to items that needs it, and existing ZIP64 data need to be removed. + Oct-2009 - Mathias Svensson - Added support for BZIP2 as compression mode (bzip2 lib is required) + Jan-2010 - back to unzip and minizip 1.0 name scheme, with compatibility layer + +*/ + + +#include <stdio.h> +#include <stdlib.h> +#include <string.h> +#include <time.h> +#include "zlib.h" +#include "zip.h" + +#ifdef STDC +# include <stddef.h> +# include <string.h> +# include <stdlib.h> +#endif +#ifdef NO_ERRNO_H + extern int errno; +#else +# include <errno.h> +#endif + + +#ifndef local +# define local static +#endif +/* compile with -Dlocal if your debugger can't find static symbols */ + +#ifndef VERSIONMADEBY +# define VERSIONMADEBY (0x0) /* platform depedent */ +#endif + +#ifndef Z_BUFSIZE +#define Z_BUFSIZE (64*1024) //(16384) +#endif + +#ifndef Z_MAXFILENAMEINZIP +#define Z_MAXFILENAMEINZIP (256) +#endif + +#ifndef ALLOC +# define ALLOC(size) (malloc(size)) +#endif +#ifndef TRYFREE +# define TRYFREE(p) {if (p) free(p);} +#endif + +/* +#define SIZECENTRALDIRITEM (0x2e) +#define SIZEZIPLOCALHEADER (0x1e) +*/ + +/* I've found an old Unix (a SunOS 4.1.3_U1) without all SEEK_* defined.... */ + + +// NOT sure that this work on ALL platform +#define MAKEULONG64(a, b) ((ZPOS64_T)(((unsigned long)(a)) | ((ZPOS64_T)((unsigned long)(b))) << 32)) + +#ifndef SEEK_CUR +#define SEEK_CUR 1 +#endif + +#ifndef SEEK_END +#define SEEK_END 2 +#endif + +#ifndef SEEK_SET +#define SEEK_SET 0 +#endif + +#ifndef DEF_MEM_LEVEL +#if MAX_MEM_LEVEL >= 8 +# define DEF_MEM_LEVEL 8 +#else +# define DEF_MEM_LEVEL MAX_MEM_LEVEL +#endif +#endif +const char zip_copyright[] =" zip 1.01 Copyright 1998-2004 Gilles Vollant - http://www.winimage.com/zLibDll"; + + +#define SIZEDATA_INDATABLOCK (4096-(4*4)) + +#define LOCALHEADERMAGIC (0x04034b50) +#define CENTRALHEADERMAGIC (0x02014b50) +#define ENDHEADERMAGIC (0x06054b50) +#define ZIP64ENDHEADERMAGIC (0x6064b50) +#define ZIP64ENDLOCHEADERMAGIC (0x7064b50) + +#define FLAG_LOCALHEADER_OFFSET (0x06) +#define CRC_LOCALHEADER_OFFSET (0x0e) + +#define SIZECENTRALHEADER (0x2e) /* 46 */ + +typedef struct linkedlist_datablock_internal_s +{ + struct linkedlist_datablock_internal_s* next_datablock; + uLong avail_in_this_block; + uLong filled_in_this_block; + uLong unused; /* for future use and alignement */ + unsigned char data[SIZEDATA_INDATABLOCK]; +} linkedlist_datablock_internal; + +typedef struct linkedlist_data_s +{ + linkedlist_datablock_internal* first_block; + linkedlist_datablock_internal* last_block; +} linkedlist_data; + + +typedef struct +{ + z_stream stream; /* zLib stream structure for inflate */ +#ifdef HAVE_BZIP2 + bz_stream bstream; /* bzLib stream structure for bziped */ +#endif + + int stream_initialised; /* 1 is stream is initialised */ + uInt pos_in_buffered_data; /* last written byte in buffered_data */ + + ZPOS64_T pos_local_header; /* offset of the local header of the file + currenty writing */ + char* central_header; /* central header data for the current file */ + uLong size_centralExtra; + uLong size_centralheader; /* size of the central header for cur file */ + uLong size_centralExtraFree; /* Extra bytes allocated to the centralheader but that are not used */ + uLong flag; /* flag of the file currently writing */ + + int method; /* compression method of file currenty wr.*/ + int raw; /* 1 for directly writing raw data */ + Byte buffered_data[Z_BUFSIZE];/* buffer contain compressed data to be writ*/ + uLong dosDate; + uLong crc32; + int encrypt; + int zip64; /* Add ZIP64 extened information in the extra field */ + ZPOS64_T pos_zip64extrainfo; + ZPOS64_T totalCompressedData; + ZPOS64_T totalUncompressedData; +#ifndef NOCRYPT + unsigned long keys[3]; /* keys defining the pseudo-random sequence */ + const unsigned long* pcrc_32_tab; + int crypt_header_size; +#endif +} curfile64_info; + +typedef struct +{ + zlib_filefunc64_32_def z_filefunc; + voidpf filestream; /* io structore of the zipfile */ + linkedlist_data central_dir;/* datablock with central dir in construction*/ + int in_opened_file_inzip; /* 1 if a file in the zip is currently writ.*/ + curfile64_info ci; /* info on the file curretly writing */ + + ZPOS64_T begin_pos; /* position of the beginning of the zipfile */ + ZPOS64_T add_position_when_writting_offset; + ZPOS64_T number_entry; + +#ifndef NO_ADDFILEINEXISTINGZIP + char *globalcomment; +#endif + +} zip64_internal; + + +#ifndef NOCRYPT +#define INCLUDECRYPTINGCODE_IFCRYPTALLOWED +#include "crypt.h" +#endif + +local linkedlist_datablock_internal* allocate_new_datablock() +{ + linkedlist_datablock_internal* ldi; + ldi = (linkedlist_datablock_internal*) + ALLOC(sizeof(linkedlist_datablock_internal)); + if (ldi!=NULL) + { + ldi->next_datablock = NULL ; + ldi->filled_in_this_block = 0 ; + ldi->avail_in_this_block = SIZEDATA_INDATABLOCK ; + } + return ldi; +} + +local void free_datablock(linkedlist_datablock_internal* ldi) +{ + while (ldi!=NULL) + { + linkedlist_datablock_internal* ldinext = ldi->next_datablock; + TRYFREE(ldi); + ldi = ldinext; + } +} + +local void init_linkedlist(linkedlist_data* ll) +{ + ll->first_block = ll->last_block = NULL; +} + +local void free_linkedlist(linkedlist_data* ll) +{ + free_datablock(ll->first_block); + ll->first_block = ll->last_block = NULL; +} + + +local int add_data_in_datablock(linkedlist_data* ll, const void* buf, uLong len) +{ + linkedlist_datablock_internal* ldi; + const unsigned char* from_copy; + + if (ll==NULL) + return ZIP_INTERNALERROR; + + if (ll->last_block == NULL) + { + ll->first_block = ll->last_block = allocate_new_datablock(); + if (ll->first_block == NULL) + return ZIP_INTERNALERROR; + } + + ldi = ll->last_block; + from_copy = (unsigned char*)buf; + + while (len>0) + { + uInt copy_this; + uInt i; + unsigned char* to_copy; + + if (ldi->avail_in_this_block==0) + { + ldi->next_datablock = allocate_new_datablock(); + if (ldi->next_datablock == NULL) + return ZIP_INTERNALERROR; + ldi = ldi->next_datablock ; + ll->last_block = ldi; + } + + if (ldi->avail_in_this_block < len) + copy_this = (uInt)ldi->avail_in_this_block; + else + copy_this = (uInt)len; + + to_copy = &(ldi->data[ldi->filled_in_this_block]); + + for (i=0;i<copy_this;i++) + *(to_copy+i)=*(from_copy+i); + + ldi->filled_in_this_block += copy_this; + ldi->avail_in_this_block -= copy_this; + from_copy += copy_this ; + len -= copy_this; + } + return ZIP_OK; +} + + + +/****************************************************************************/ + +#ifndef NO_ADDFILEINEXISTINGZIP +/* =========================================================================== + Inputs a long in LSB order to the given file + nbByte == 1, 2 ,4 or 8 (byte, short or long, ZPOS64_T) +*/ + +local int zip64local_putValue OF((const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream, ZPOS64_T x, int nbByte)); +local int zip64local_putValue (const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream, ZPOS64_T x, int nbByte) +{ + unsigned char buf[8]; + int n; + for (n = 0; n < nbByte; n++) + { + buf[n] = (unsigned char)(x & 0xff); + x >>= 8; + } + if (x != 0) + { /* data overflow - hack for ZIP64 (X Roche) */ + for (n = 0; n < nbByte; n++) + { + buf[n] = 0xff; + } + } + + if (ZWRITE64(*pzlib_filefunc_def,filestream,buf,nbByte)!=(uLong)nbByte) + return ZIP_ERRNO; + else + return ZIP_OK; +} + +local void zip64local_putValue_inmemory OF((void* dest, ZPOS64_T x, int nbByte)); +local void zip64local_putValue_inmemory (void* dest, ZPOS64_T x, int nbByte) +{ + unsigned char* buf=(unsigned char*)dest; + int n; + for (n = 0; n < nbByte; n++) { + buf[n] = (unsigned char)(x & 0xff); + x >>= 8; + } + + if (x != 0) + { /* data overflow - hack for ZIP64 */ + for (n = 0; n < nbByte; n++) + { + buf[n] = 0xff; + } + } +} + +/****************************************************************************/ + + +local uLong zip64local_TmzDateToDosDate(const tm_zip* ptm) +{ + uLong year = (uLong)ptm->tm_year; + if (year>=1980) + year-=1980; + else if (year>=80) + year-=80; + return + (uLong) (((ptm->tm_mday) + (32 * (ptm->tm_mon+1)) + (512 * year)) << 16) | + ((ptm->tm_sec/2) + (32* ptm->tm_min) + (2048 * (uLong)ptm->tm_hour)); +} + + +/****************************************************************************/ + +local int zip64local_getByte OF((const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream, int *pi)); + +local int zip64local_getByte(const zlib_filefunc64_32_def* pzlib_filefunc_def,voidpf filestream,int* pi) +{ + unsigned char c; + int err = (int)ZREAD64(*pzlib_filefunc_def,filestream,&c,1); + if (err==1) + { + *pi = (int)c; + return ZIP_OK; + } + else + { + if (ZERROR64(*pzlib_filefunc_def,filestream)) + return ZIP_ERRNO; + else + return ZIP_EOF; + } +} + + +/* =========================================================================== + Reads a long in LSB order from the given gz_stream. Sets +*/ +local int zip64local_getShort OF((const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream, uLong *pX)); + +local int zip64local_getShort (const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream, uLong* pX) +{ + uLong x ; + int i = 0; + int err; + + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x = (uLong)i; + + if (err==ZIP_OK) + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x += ((uLong)i)<<8; + + if (err==ZIP_OK) + *pX = x; + else + *pX = 0; + return err; +} + +local int zip64local_getLong OF((const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream, uLong *pX)); + +local int zip64local_getLong (const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream, uLong* pX) +{ + uLong x ; + int i = 0; + int err; + + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x = (uLong)i; + + if (err==ZIP_OK) + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x += ((uLong)i)<<8; + + if (err==ZIP_OK) + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x += ((uLong)i)<<16; + + if (err==ZIP_OK) + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x += ((uLong)i)<<24; + + if (err==ZIP_OK) + *pX = x; + else + *pX = 0; + return err; +} + +local int zip64local_getLong64 OF((const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream, ZPOS64_T *pX)); + + +local int zip64local_getLong64 (const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream, ZPOS64_T *pX) +{ + ZPOS64_T x; + int i = 0; + int err; + + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x = (ZPOS64_T)i; + + if (err==ZIP_OK) + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x += ((ZPOS64_T)i)<<8; + + if (err==ZIP_OK) + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x += ((ZPOS64_T)i)<<16; + + if (err==ZIP_OK) + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x += ((ZPOS64_T)i)<<24; + + if (err==ZIP_OK) + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x += ((ZPOS64_T)i)<<32; + + if (err==ZIP_OK) + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x += ((ZPOS64_T)i)<<40; + + if (err==ZIP_OK) + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x += ((ZPOS64_T)i)<<48; + + if (err==ZIP_OK) + err = zip64local_getByte(pzlib_filefunc_def,filestream,&i); + x += ((ZPOS64_T)i)<<56; + + if (err==ZIP_OK) + *pX = x; + else + *pX = 0; + + return err; +} + +#ifndef BUFREADCOMMENT +#define BUFREADCOMMENT (0x400) +#endif +/* + Locate the Central directory of a zipfile (at the end, just before + the global comment) +*/ +local ZPOS64_T zip64local_SearchCentralDir OF((const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream)); + +local ZPOS64_T zip64local_SearchCentralDir(const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream) +{ + unsigned char* buf; + ZPOS64_T uSizeFile; + ZPOS64_T uBackRead; + ZPOS64_T uMaxBack=0xffff; /* maximum size of global comment */ + ZPOS64_T uPosFound=0; + + if (ZSEEK64(*pzlib_filefunc_def,filestream,0,ZLIB_FILEFUNC_SEEK_END) != 0) + return 0; + + + uSizeFile = ZTELL64(*pzlib_filefunc_def,filestream); + + if (uMaxBack>uSizeFile) + uMaxBack = uSizeFile; + + buf = (unsigned char*)ALLOC(BUFREADCOMMENT+4); + if (buf==NULL) + return 0; + + uBackRead = 4; + while (uBackRead<uMaxBack) + { + uLong uReadSize; + ZPOS64_T uReadPos ; + int i; + if (uBackRead+BUFREADCOMMENT>uMaxBack) + uBackRead = uMaxBack; + else + uBackRead+=BUFREADCOMMENT; + uReadPos = uSizeFile-uBackRead ; + + uReadSize = ((BUFREADCOMMENT+4) < (uSizeFile-uReadPos)) ? + (BUFREADCOMMENT+4) : (uLong)(uSizeFile-uReadPos); + if (ZSEEK64(*pzlib_filefunc_def,filestream,uReadPos,ZLIB_FILEFUNC_SEEK_SET)!=0) + break; + + if (ZREAD64(*pzlib_filefunc_def,filestream,buf,uReadSize)!=uReadSize) + break; + + for (i=(int)uReadSize-3; (i--)>0;) + if (((*(buf+i))==0x50) && ((*(buf+i+1))==0x4b) && + ((*(buf+i+2))==0x05) && ((*(buf+i+3))==0x06)) + { + uPosFound = uReadPos+i; + break; + } + + if (uPosFound!=0) + break; + } + TRYFREE(buf); + return uPosFound; +} + +/* +Locate the End of Zip64 Central directory locator and from there find the CD of a zipfile (at the end, just before +the global comment) +*/ +local ZPOS64_T zip64local_SearchCentralDir64 OF((const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream)); + +local ZPOS64_T zip64local_SearchCentralDir64(const zlib_filefunc64_32_def* pzlib_filefunc_def, voidpf filestream) +{ + unsigned char* buf; + ZPOS64_T uSizeFile; + ZPOS64_T uBackRead; + ZPOS64_T uMaxBack=0xffff; /* maximum size of global comment */ + ZPOS64_T uPosFound=0; + uLong uL; + ZPOS64_T relativeOffset; + + if (ZSEEK64(*pzlib_filefunc_def,filestream,0,ZLIB_FILEFUNC_SEEK_END) != 0) + return 0; + + uSizeFile = ZTELL64(*pzlib_filefunc_def,filestream); + + if (uMaxBack>uSizeFile) + uMaxBack = uSizeFile; + + buf = (unsigned char*)ALLOC(BUFREADCOMMENT+4); + if (buf==NULL) + return 0; + + uBackRead = 4; + while (uBackRead<uMaxBack) + { + uLong uReadSize; + ZPOS64_T uReadPos; + int i; + if (uBackRead+BUFREADCOMMENT>uMaxBack) + uBackRead = uMaxBack; + else + uBackRead+=BUFREADCOMMENT; + uReadPos = uSizeFile-uBackRead ; + + uReadSize = ((BUFREADCOMMENT+4) < (uSizeFile-uReadPos)) ? + (BUFREADCOMMENT+4) : (uLong)(uSizeFile-uReadPos); + if (ZSEEK64(*pzlib_filefunc_def,filestream,uReadPos,ZLIB_FILEFUNC_SEEK_SET)!=0) + break; + + if (ZREAD64(*pzlib_filefunc_def,filestream,buf,uReadSize)!=uReadSize) + break; + + for (i=(int)uReadSize-3; (i--)>0;) + { + // Signature "0x07064b50" Zip64 end of central directory locater + if (((*(buf+i))==0x50) && ((*(buf+i+1))==0x4b) && ((*(buf+i+2))==0x06) && ((*(buf+i+3))==0x07)) + { + uPosFound = uReadPos+i; + break; + } + } + + if (uPosFound!=0) + break; + } + + TRYFREE(buf); + if (uPosFound == 0) + return 0; + + /* Zip64 end of central directory locator */ + if (ZSEEK64(*pzlib_filefunc_def,filestream, uPosFound,ZLIB_FILEFUNC_SEEK_SET)!=0) + return 0; + + /* the signature, already checked */ + if (zip64local_getLong(pzlib_filefunc_def,filestream,&uL)!=ZIP_OK) + return 0; + + /* number of the disk with the start of the zip64 end of central directory */ + if (zip64local_getLong(pzlib_filefunc_def,filestream,&uL)!=ZIP_OK) + return 0; + if (uL != 0) + return 0; + + /* relative offset of the zip64 end of central directory record */ + if (zip64local_getLong64(pzlib_filefunc_def,filestream,&relativeOffset)!=ZIP_OK) + return 0; + + /* total number of disks */ + if (zip64local_getLong(pzlib_filefunc_def,filestream,&uL)!=ZIP_OK) + return 0; + if (uL != 1) + return 0; + + /* Goto Zip64 end of central directory record */ + if (ZSEEK64(*pzlib_filefunc_def,filestream, relativeOffset,ZLIB_FILEFUNC_SEEK_SET)!=0) + return 0; + + /* the signature */ + if (zip64local_getLong(pzlib_filefunc_def,filestream,&uL)!=ZIP_OK) + return 0; + + if (uL != 0x06064b50) // signature of 'Zip64 end of central directory' + return 0; + + return relativeOffset; +} + +int LoadCentralDirectoryRecord(zip64_internal* pziinit) +{ + int err=ZIP_OK; + ZPOS64_T byte_before_the_zipfile;/* byte before the zipfile, (>0 for sfx)*/ + + ZPOS64_T size_central_dir; /* size of the central directory */ + ZPOS64_T offset_central_dir; /* offset of start of central directory */ + ZPOS64_T central_pos; + uLong uL; + + uLong number_disk; /* number of the current dist, used for + spaning ZIP, unsupported, always 0*/ + uLong number_disk_with_CD; /* number the the disk with central dir, used + for spaning ZIP, unsupported, always 0*/ + ZPOS64_T number_entry; + ZPOS64_T number_entry_CD; /* total number of entries in + the central dir + (same than number_entry on nospan) */ + uLong VersionMadeBy; + uLong VersionNeeded; + uLong size_comment; + + int hasZIP64Record = 0; + + // check first if we find a ZIP64 record + central_pos = zip64local_SearchCentralDir64(&pziinit->z_filefunc,pziinit->filestream); + if(central_pos > 0) + { + hasZIP64Record = 1; + } + else if(central_pos == 0) + { + central_pos = zip64local_SearchCentralDir(&pziinit->z_filefunc,pziinit->filestream); + } + +/* disable to allow appending to empty ZIP archive + if (central_pos==0) + err=ZIP_ERRNO; +*/ + + if(hasZIP64Record) + { + ZPOS64_T sizeEndOfCentralDirectory; + if (ZSEEK64(pziinit->z_filefunc, pziinit->filestream, central_pos, ZLIB_FILEFUNC_SEEK_SET) != 0) + err=ZIP_ERRNO; + + /* the signature, already checked */ + if (zip64local_getLong(&pziinit->z_filefunc, pziinit->filestream,&uL)!=ZIP_OK) + err=ZIP_ERRNO; + + /* size of zip64 end of central directory record */ + if (zip64local_getLong64(&pziinit->z_filefunc, pziinit->filestream, &sizeEndOfCentralDirectory)!=ZIP_OK) + err=ZIP_ERRNO; + + /* version made by */ + if (zip64local_getShort(&pziinit->z_filefunc, pziinit->filestream, &VersionMadeBy)!=ZIP_OK) + err=ZIP_ERRNO; + + /* version needed to extract */ + if (zip64local_getShort(&pziinit->z_filefunc, pziinit->filestream, &VersionNeeded)!=ZIP_OK) + err=ZIP_ERRNO; + + /* number of this disk */ + if (zip64local_getLong(&pziinit->z_filefunc, pziinit->filestream,&number_disk)!=ZIP_OK) + err=ZIP_ERRNO; + + /* number of the disk with the start of the central directory */ + if (zip64local_getLong(&pziinit->z_filefunc, pziinit->filestream,&number_disk_with_CD)!=ZIP_OK) + err=ZIP_ERRNO; + + /* total number of entries in the central directory on this disk */ + if (zip64local_getLong64(&pziinit->z_filefunc, pziinit->filestream, &number_entry)!=ZIP_OK) + err=ZIP_ERRNO; + + /* total number of entries in the central directory */ + if (zip64local_getLong64(&pziinit->z_filefunc, pziinit->filestream,&number_entry_CD)!=ZIP_OK) + err=ZIP_ERRNO; + + if ((number_entry_CD!=number_entry) || (number_disk_with_CD!=0) || (number_disk!=0)) + err=ZIP_BADZIPFILE; + + /* size of the central directory */ + if (zip64local_getLong64(&pziinit->z_filefunc, pziinit->filestream,&size_central_dir)!=ZIP_OK) + err=ZIP_ERRNO; + + /* offset of start of central directory with respect to the + starting disk number */ + if (zip64local_getLong64(&pziinit->z_filefunc, pziinit->filestream,&offset_central_dir)!=ZIP_OK) + err=ZIP_ERRNO; + + // TODO.. + // read the comment from the standard central header. + size_comment = 0; + } + else + { + // Read End of central Directory info + if (ZSEEK64(pziinit->z_filefunc, pziinit->filestream, central_pos,ZLIB_FILEFUNC_SEEK_SET)!=0) + err=ZIP_ERRNO; + + /* the signature, already checked */ + if (zip64local_getLong(&pziinit->z_filefunc, pziinit->filestream,&uL)!=ZIP_OK) + err=ZIP_ERRNO; + + /* number of this disk */ + if (zip64local_getShort(&pziinit->z_filefunc, pziinit->filestream,&number_disk)!=ZIP_OK) + err=ZIP_ERRNO; + + /* number of the disk with the start of the central directory */ + if (zip64local_getShort(&pziinit->z_filefunc, pziinit->filestream,&number_disk_with_CD)!=ZIP_OK) + err=ZIP_ERRNO; + + /* total number of entries in the central dir on this disk */ + number_entry = 0; + if (zip64local_getShort(&pziinit->z_filefunc, pziinit->filestream, &uL)!=ZIP_OK) + err=ZIP_ERRNO; + else + number_entry = uL; + + /* total number of entries in the central dir */ + number_entry_CD = 0; + if (zip64local_getShort(&pziinit->z_filefunc, pziinit->filestream, &uL)!=ZIP_OK) + err=ZIP_ERRNO; + else + number_entry_CD = uL; + + if ((number_entry_CD!=number_entry) || (number_disk_with_CD!=0) || (number_disk!=0)) + err=ZIP_BADZIPFILE; + + /* size of the central directory */ + size_central_dir = 0; + if (zip64local_getLong(&pziinit->z_filefunc, pziinit->filestream, &uL)!=ZIP_OK) + err=ZIP_ERRNO; + else + size_central_dir = uL; + + /* offset of start of central directory with respect to the starting disk number */ + offset_central_dir = 0; + if (zip64local_getLong(&pziinit->z_filefunc, pziinit->filestream, &uL)!=ZIP_OK) + err=ZIP_ERRNO; + else + offset_central_dir = uL; + + + /* zipfile global comment length */ + if (zip64local_getShort(&pziinit->z_filefunc, pziinit->filestream, &size_comment)!=ZIP_OK) + err=ZIP_ERRNO; + } + + if ((central_pos<offset_central_dir+size_central_dir) && + (err==ZIP_OK)) + err=ZIP_BADZIPFILE; + + if (err!=ZIP_OK) + { + ZCLOSE64(pziinit->z_filefunc, pziinit->filestream); + return ZIP_ERRNO; + } + + if (size_comment>0) + { + pziinit->globalcomment = (char*)ALLOC(size_comment+1); + if (pziinit->globalcomment) + { + size_comment = ZREAD64(pziinit->z_filefunc, pziinit->filestream, pziinit->globalcomment,size_comment); + pziinit->globalcomment[size_comment]=0; + } + } + + byte_before_the_zipfile = central_pos - (offset_central_dir+size_central_dir); + pziinit->add_position_when_writting_offset = byte_before_the_zipfile; + + { + ZPOS64_T size_central_dir_to_read = size_central_dir; + size_t buf_size = SIZEDATA_INDATABLOCK; + void* buf_read = (void*)ALLOC(buf_size); + if (ZSEEK64(pziinit->z_filefunc, pziinit->filestream, offset_central_dir + byte_before_the_zipfile, ZLIB_FILEFUNC_SEEK_SET) != 0) + err=ZIP_ERRNO; + + while ((size_central_dir_to_read>0) && (err==ZIP_OK)) + { + ZPOS64_T read_this = SIZEDATA_INDATABLOCK; + if (read_this > size_central_dir_to_read) + read_this = size_central_dir_to_read; + + if (ZREAD64(pziinit->z_filefunc, pziinit->filestream,buf_read,(uLong)read_this) != read_this) + err=ZIP_ERRNO; + + if (err==ZIP_OK) + err = add_data_in_datablock(&pziinit->central_dir,buf_read, (uLong)read_this); + + size_central_dir_to_read-=read_this; + } + TRYFREE(buf_read); + } + pziinit->begin_pos = byte_before_the_zipfile; + pziinit->number_entry = number_entry_CD; + + if (ZSEEK64(pziinit->z_filefunc, pziinit->filestream, offset_central_dir+byte_before_the_zipfile,ZLIB_FILEFUNC_SEEK_SET) != 0) + err=ZIP_ERRNO; + + return err; +} + + +#endif /* !NO_ADDFILEINEXISTINGZIP*/ + + +/************************************************************/ +extern zipFile ZEXPORT zipOpen3 (const void *pathname, int append, zipcharpc* globalcomment, zlib_filefunc64_32_def* pzlib_filefunc64_32_def) +{ + zip64_internal ziinit; + zip64_internal* zi; + int err=ZIP_OK; + + ziinit.z_filefunc.zseek32_file = NULL; + ziinit.z_filefunc.ztell32_file = NULL; + if (pzlib_filefunc64_32_def==NULL) + fill_fopen64_filefunc(&ziinit.z_filefunc.zfile_func64); + else + ziinit.z_filefunc = *pzlib_filefunc64_32_def; + + ziinit.filestream = ZOPEN64(ziinit.z_filefunc, + pathname, + (append == APPEND_STATUS_CREATE) ? + (ZLIB_FILEFUNC_MODE_READ | ZLIB_FILEFUNC_MODE_WRITE | ZLIB_FILEFUNC_MODE_CREATE) : + (ZLIB_FILEFUNC_MODE_READ | ZLIB_FILEFUNC_MODE_WRITE | ZLIB_FILEFUNC_MODE_EXISTING)); + + if (ziinit.filestream == NULL) + return NULL; + + if (append == APPEND_STATUS_CREATEAFTER) + ZSEEK64(ziinit.z_filefunc,ziinit.filestream,0,SEEK_END); + + ziinit.begin_pos = ZTELL64(ziinit.z_filefunc,ziinit.filestream); + ziinit.in_opened_file_inzip = 0; + ziinit.ci.stream_initialised = 0; + ziinit.number_entry = 0; + ziinit.add_position_when_writting_offset = 0; + init_linkedlist(&(ziinit.central_dir)); + + + + zi = (zip64_internal*)ALLOC(sizeof(zip64_internal)); + if (zi==NULL) + { + ZCLOSE64(ziinit.z_filefunc,ziinit.filestream); + return NULL; + } + + /* now we add file in a zipfile */ +# ifndef NO_ADDFILEINEXISTINGZIP + ziinit.globalcomment = NULL; + if (append == APPEND_STATUS_ADDINZIP) + { + // Read and Cache Central Directory Records + err = LoadCentralDirectoryRecord(&ziinit); + } + + if (globalcomment) + { + *globalcomment = ziinit.globalcomment; + } +# endif /* !NO_ADDFILEINEXISTINGZIP*/ + + if (err != ZIP_OK) + { +# ifndef NO_ADDFILEINEXISTINGZIP + TRYFREE(ziinit.globalcomment); +# endif /* !NO_ADDFILEINEXISTINGZIP*/ + TRYFREE(zi); + return NULL; + } + else + { + *zi = ziinit; + return (zipFile)zi; + } +} + +extern zipFile ZEXPORT zipOpen2 (const char *pathname, int append, zipcharpc* globalcomment, zlib_filefunc_def* pzlib_filefunc32_def) +{ + if (pzlib_filefunc32_def != NULL) + { + zlib_filefunc64_32_def zlib_filefunc64_32_def_fill; + fill_zlib_filefunc64_32_def_from_filefunc32(&zlib_filefunc64_32_def_fill,pzlib_filefunc32_def); + return zipOpen3(pathname, append, globalcomment, &zlib_filefunc64_32_def_fill); + } + else + return zipOpen3(pathname, append, globalcomment, NULL); +} + +extern zipFile ZEXPORT zipOpen2_64 (const void *pathname, int append, zipcharpc* globalcomment, zlib_filefunc64_def* pzlib_filefunc_def) +{ + if (pzlib_filefunc_def != NULL) + { + zlib_filefunc64_32_def zlib_filefunc64_32_def_fill; + zlib_filefunc64_32_def_fill.zfile_func64 = *pzlib_filefunc_def; + zlib_filefunc64_32_def_fill.ztell32_file = NULL; + zlib_filefunc64_32_def_fill.zseek32_file = NULL; + return zipOpen3(pathname, append, globalcomment, &zlib_filefunc64_32_def_fill); + } + else + return zipOpen3(pathname, append, globalcomment, NULL); +} + + + +extern zipFile ZEXPORT zipOpen (const char* pathname, int append) +{ + return zipOpen3((const void*)pathname,append,NULL,NULL); +} + +extern zipFile ZEXPORT zipOpen64 (const void* pathname, int append) +{ + return zipOpen3(pathname,append,NULL,NULL); +} + +int Write_LocalFileHeader(zip64_internal* zi, const char* filename, uInt size_extrafield_local, const void* extrafield_local) +{ + /* write the local header */ + int err; + uInt size_filename = (uInt)strlen(filename); + uInt size_extrafield = size_extrafield_local; + + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)LOCALHEADERMAGIC, 4); + + if (err==ZIP_OK) + { + if(zi->ci.zip64) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)45,2);/* version needed to extract */ + else + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)20,2);/* version needed to extract */ + } + + if (err==ZIP_OK) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)zi->ci.flag,2); + + if (err==ZIP_OK) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)zi->ci.method,2); + + if (err==ZIP_OK) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)zi->ci.dosDate,4); + + // CRC / Compressed size / Uncompressed size will be filled in later and rewritten later + if (err==ZIP_OK) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0,4); /* crc 32, unknown */ + if (err==ZIP_OK) + { + if(zi->ci.zip64) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0xFFFFFFFF,4); /* compressed size, unknown */ + else + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0,4); /* compressed size, unknown */ + } + if (err==ZIP_OK) + { + if(zi->ci.zip64) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0xFFFFFFFF,4); /* uncompressed size, unknown */ + else + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0,4); /* uncompressed size, unknown */ + } + + if (err==ZIP_OK) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)size_filename,2); + + if(zi->ci.zip64) + { + size_extrafield += 20; + } + + if (err==ZIP_OK) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)size_extrafield,2); + + if ((err==ZIP_OK) && (size_filename > 0)) + { + if (ZWRITE64(zi->z_filefunc,zi->filestream,filename,size_filename)!=size_filename) + err = ZIP_ERRNO; + } + + if ((err==ZIP_OK) && (size_extrafield_local > 0)) + { + if (ZWRITE64(zi->z_filefunc, zi->filestream, extrafield_local, size_extrafield_local) != size_extrafield_local) + err = ZIP_ERRNO; + } + + + if ((err==ZIP_OK) && (zi->ci.zip64)) + { + // write the Zip64 extended info + short HeaderID = 1; + short DataSize = 16; + ZPOS64_T CompressedSize = 0; + ZPOS64_T UncompressedSize = 0; + + // Remember position of Zip64 extended info for the local file header. (needed when we update size after done with file) + zi->ci.pos_zip64extrainfo = ZTELL64(zi->z_filefunc,zi->filestream); + + err = zip64local_putValue(&zi->z_filefunc, zi->filestream, (short)HeaderID,2); + err = zip64local_putValue(&zi->z_filefunc, zi->filestream, (short)DataSize,2); + + err = zip64local_putValue(&zi->z_filefunc, zi->filestream, (ZPOS64_T)UncompressedSize,8); + err = zip64local_putValue(&zi->z_filefunc, zi->filestream, (ZPOS64_T)CompressedSize,8); + } + + return err; +} + +/* + NOTE. + When writing RAW the ZIP64 extended information in extrafield_local and extrafield_global needs to be stripped + before calling this function it can be done with zipRemoveExtraInfoBlock + + It is not done here because then we need to realloc a new buffer since parameters are 'const' and I want to minimize + unnecessary allocations. + */ +extern int ZEXPORT zipOpenNewFileInZip4_64 (zipFile file, const char* filename, const zip_fileinfo* zipfi, + const void* extrafield_local, uInt size_extrafield_local, + const void* extrafield_global, uInt size_extrafield_global, + const char* comment, int method, int level, int raw, + int windowBits,int memLevel, int strategy, + const char* password, uLong crcForCrypting, + uLong versionMadeBy, uLong flagBase, int zip64) +{ + zip64_internal* zi; + uInt size_filename; + uInt size_comment; + uInt i; + int err = ZIP_OK; + +# ifdef NOCRYPT + (crcForCrypting); + if (password != NULL) + return ZIP_PARAMERROR; +# endif + + if (file == NULL) + return ZIP_PARAMERROR; + +#ifdef HAVE_BZIP2 + if ((method!=0) && (method!=Z_DEFLATED) && (method!=Z_BZIP2ED)) + return ZIP_PARAMERROR; +#else + if ((method!=0) && (method!=Z_DEFLATED)) + return ZIP_PARAMERROR; +#endif + + zi = (zip64_internal*)file; + + if (zi->in_opened_file_inzip == 1) + { + err = zipCloseFileInZip (file); + if (err != ZIP_OK) + return err; + } + + if (filename==NULL) + filename="-"; + + if (comment==NULL) + size_comment = 0; + else + size_comment = (uInt)strlen(comment); + + size_filename = (uInt)strlen(filename); + + if (zipfi == NULL) + zi->ci.dosDate = 0; + else + { + if (zipfi->dosDate != 0) + zi->ci.dosDate = zipfi->dosDate; + else + zi->ci.dosDate = zip64local_TmzDateToDosDate(&zipfi->tmz_date); + } + + zi->ci.flag = flagBase; + if ((level==8) || (level==9)) + zi->ci.flag |= 2; + if (level==2) + zi->ci.flag |= 4; + if (level==1) + zi->ci.flag |= 6; + if (password != NULL) + zi->ci.flag |= 1; + + zi->ci.crc32 = 0; + zi->ci.method = method; + zi->ci.encrypt = 0; + zi->ci.stream_initialised = 0; + zi->ci.pos_in_buffered_data = 0; + zi->ci.raw = raw; + zi->ci.pos_local_header = ZTELL64(zi->z_filefunc,zi->filestream); + + zi->ci.size_centralheader = SIZECENTRALHEADER + size_filename + size_extrafield_global + size_comment; + zi->ci.size_centralExtraFree = 32; // Extra space we have reserved in case we need to add ZIP64 extra info data + + zi->ci.central_header = (char*)ALLOC((uInt)zi->ci.size_centralheader + zi->ci.size_centralExtraFree); + + zi->ci.size_centralExtra = size_extrafield_global; + zip64local_putValue_inmemory(zi->ci.central_header,(uLong)CENTRALHEADERMAGIC,4); + /* version info */ + zip64local_putValue_inmemory(zi->ci.central_header+4,(uLong)versionMadeBy,2); + zip64local_putValue_inmemory(zi->ci.central_header+6,(uLong)20,2); + zip64local_putValue_inmemory(zi->ci.central_header+8,(uLong)zi->ci.flag,2); + zip64local_putValue_inmemory(zi->ci.central_header+10,(uLong)zi->ci.method,2); + zip64local_putValue_inmemory(zi->ci.central_header+12,(uLong)zi->ci.dosDate,4); + zip64local_putValue_inmemory(zi->ci.central_header+16,(uLong)0,4); /*crc*/ + zip64local_putValue_inmemory(zi->ci.central_header+20,(uLong)0,4); /*compr size*/ + zip64local_putValue_inmemory(zi->ci.central_header+24,(uLong)0,4); /*uncompr size*/ + zip64local_putValue_inmemory(zi->ci.central_header+28,(uLong)size_filename,2); + zip64local_putValue_inmemory(zi->ci.central_header+30,(uLong)size_extrafield_global,2); + zip64local_putValue_inmemory(zi->ci.central_header+32,(uLong)size_comment,2); + zip64local_putValue_inmemory(zi->ci.central_header+34,(uLong)0,2); /*disk nm start*/ + + if (zipfi==NULL) + zip64local_putValue_inmemory(zi->ci.central_header+36,(uLong)0,2); + else + zip64local_putValue_inmemory(zi->ci.central_header+36,(uLong)zipfi->internal_fa,2); + + if (zipfi==NULL) + zip64local_putValue_inmemory(zi->ci.central_header+38,(uLong)0,4); + else + zip64local_putValue_inmemory(zi->ci.central_header+38,(uLong)zipfi->external_fa,4); + + if(zi->ci.pos_local_header >= 0xffffffff) + zip64local_putValue_inmemory(zi->ci.central_header+42,(uLong)0xffffffff,4); + else + zip64local_putValue_inmemory(zi->ci.central_header+42,(uLong)zi->ci.pos_local_header - zi->add_position_when_writting_offset,4); + + for (i=0;i<size_filename;i++) + *(zi->ci.central_header+SIZECENTRALHEADER+i) = *(filename+i); + + for (i=0;i<size_extrafield_global;i++) + *(zi->ci.central_header+SIZECENTRALHEADER+size_filename+i) = + *(((const char*)extrafield_global)+i); + + for (i=0;i<size_comment;i++) + *(zi->ci.central_header+SIZECENTRALHEADER+size_filename+ + size_extrafield_global+i) = *(comment+i); + if (zi->ci.central_header == NULL) + return ZIP_INTERNALERROR; + + zi->ci.zip64 = zip64; + zi->ci.totalCompressedData = 0; + zi->ci.totalUncompressedData = 0; + zi->ci.pos_zip64extrainfo = 0; + + err = Write_LocalFileHeader(zi, filename, size_extrafield_local, extrafield_local); + +#ifdef HAVE_BZIP2 + zi->ci.bstream.avail_in = (uInt)0; + zi->ci.bstream.avail_out = (uInt)Z_BUFSIZE; + zi->ci.bstream.next_out = (char*)zi->ci.buffered_data; + zi->ci.bstream.total_in_hi32 = 0; + zi->ci.bstream.total_in_lo32 = 0; + zi->ci.bstream.total_out_hi32 = 0; + zi->ci.bstream.total_out_lo32 = 0; +#endif + + zi->ci.stream.avail_in = (uInt)0; + zi->ci.stream.avail_out = (uInt)Z_BUFSIZE; + zi->ci.stream.next_out = zi->ci.buffered_data; + zi->ci.stream.total_in = 0; + zi->ci.stream.total_out = 0; + zi->ci.stream.data_type = Z_BINARY; + +#ifdef HAVE_BZIP2 + if ((err==ZIP_OK) && (zi->ci.method == Z_DEFLATED || zi->ci.method == Z_BZIP2ED) && (!zi->ci.raw)) +#else + if ((err==ZIP_OK) && (zi->ci.method == Z_DEFLATED) && (!zi->ci.raw)) +#endif + { + if(zi->ci.method == Z_DEFLATED) + { + zi->ci.stream.zalloc = (alloc_func)0; + zi->ci.stream.zfree = (free_func)0; + zi->ci.stream.opaque = (voidpf)0; + + if (windowBits>0) + windowBits = -windowBits; + + err = deflateInit2(&zi->ci.stream, level, Z_DEFLATED, windowBits, memLevel, strategy); + + if (err==Z_OK) + zi->ci.stream_initialised = Z_DEFLATED; + } + else if(zi->ci.method == Z_BZIP2ED) + { +#ifdef HAVE_BZIP2 + // Init BZip stuff here + zi->ci.bstream.bzalloc = 0; + zi->ci.bstream.bzfree = 0; + zi->ci.bstream.opaque = (voidpf)0; + + err = BZ2_bzCompressInit(&zi->ci.bstream, level, 0,35); + if(err == BZ_OK) + zi->ci.stream_initialised = Z_BZIP2ED; +#endif + } + + } + +# ifndef NOCRYPT + zi->ci.crypt_header_size = 0; + if ((err==Z_OK) && (password != NULL)) + { + unsigned char bufHead[RAND_HEAD_LEN]; + unsigned int sizeHead; + zi->ci.encrypt = 1; + zi->ci.pcrc_32_tab = get_crc_table(); + /*init_keys(password,zi->ci.keys,zi->ci.pcrc_32_tab);*/ + + sizeHead=crypthead(password,bufHead,RAND_HEAD_LEN,zi->ci.keys,zi->ci.pcrc_32_tab,crcForCrypting); + zi->ci.crypt_header_size = sizeHead; + + if (ZWRITE64(zi->z_filefunc,zi->filestream,bufHead,sizeHead) != sizeHead) + err = ZIP_ERRNO; + } +# endif + + if (err==Z_OK) + zi->in_opened_file_inzip = 1; + return err; +} + +extern int ZEXPORT zipOpenNewFileInZip4 (zipFile file, const char* filename, const zip_fileinfo* zipfi, + const void* extrafield_local, uInt size_extrafield_local, + const void* extrafield_global, uInt size_extrafield_global, + const char* comment, int method, int level, int raw, + int windowBits,int memLevel, int strategy, + const char* password, uLong crcForCrypting, + uLong versionMadeBy, uLong flagBase) +{ + return zipOpenNewFileInZip4_64 (file, filename, zipfi, + extrafield_local, size_extrafield_local, + extrafield_global, size_extrafield_global, + comment, method, level, raw, + windowBits, memLevel, strategy, + password, crcForCrypting, versionMadeBy, flagBase, 0); +} + +extern int ZEXPORT zipOpenNewFileInZip3 (zipFile file, const char* filename, const zip_fileinfo* zipfi, + const void* extrafield_local, uInt size_extrafield_local, + const void* extrafield_global, uInt size_extrafield_global, + const char* comment, int method, int level, int raw, + int windowBits,int memLevel, int strategy, + const char* password, uLong crcForCrypting) +{ + return zipOpenNewFileInZip4_64 (file, filename, zipfi, + extrafield_local, size_extrafield_local, + extrafield_global, size_extrafield_global, + comment, method, level, raw, + windowBits, memLevel, strategy, + password, crcForCrypting, VERSIONMADEBY, 0, 0); +} + +extern int ZEXPORT zipOpenNewFileInZip3_64(zipFile file, const char* filename, const zip_fileinfo* zipfi, + const void* extrafield_local, uInt size_extrafield_local, + const void* extrafield_global, uInt size_extrafield_global, + const char* comment, int method, int level, int raw, + int windowBits,int memLevel, int strategy, + const char* password, uLong crcForCrypting, int zip64) +{ + return zipOpenNewFileInZip4_64 (file, filename, zipfi, + extrafield_local, size_extrafield_local, + extrafield_global, size_extrafield_global, + comment, method, level, raw, + windowBits, memLevel, strategy, + password, crcForCrypting, VERSIONMADEBY, 0, zip64); +} + +extern int ZEXPORT zipOpenNewFileInZip2(zipFile file, const char* filename, const zip_fileinfo* zipfi, + const void* extrafield_local, uInt size_extrafield_local, + const void* extrafield_global, uInt size_extrafield_global, + const char* comment, int method, int level, int raw) +{ + return zipOpenNewFileInZip4_64 (file, filename, zipfi, + extrafield_local, size_extrafield_local, + extrafield_global, size_extrafield_global, + comment, method, level, raw, + -MAX_WBITS, DEF_MEM_LEVEL, Z_DEFAULT_STRATEGY, + NULL, 0, VERSIONMADEBY, 0, 0); +} + +extern int ZEXPORT zipOpenNewFileInZip2_64(zipFile file, const char* filename, const zip_fileinfo* zipfi, + const void* extrafield_local, uInt size_extrafield_local, + const void* extrafield_global, uInt size_extrafield_global, + const char* comment, int method, int level, int raw, int zip64) +{ + return zipOpenNewFileInZip4_64 (file, filename, zipfi, + extrafield_local, size_extrafield_local, + extrafield_global, size_extrafield_global, + comment, method, level, raw, + -MAX_WBITS, DEF_MEM_LEVEL, Z_DEFAULT_STRATEGY, + NULL, 0, VERSIONMADEBY, 0, zip64); +} + +extern int ZEXPORT zipOpenNewFileInZip64 (zipFile file, const char* filename, const zip_fileinfo* zipfi, + const void* extrafield_local, uInt size_extrafield_local, + const void*extrafield_global, uInt size_extrafield_global, + const char* comment, int method, int level, int zip64) +{ + return zipOpenNewFileInZip4_64 (file, filename, zipfi, + extrafield_local, size_extrafield_local, + extrafield_global, size_extrafield_global, + comment, method, level, 0, + -MAX_WBITS, DEF_MEM_LEVEL, Z_DEFAULT_STRATEGY, + NULL, 0, VERSIONMADEBY, 0, zip64); +} + +extern int ZEXPORT zipOpenNewFileInZip (zipFile file, const char* filename, const zip_fileinfo* zipfi, + const void* extrafield_local, uInt size_extrafield_local, + const void*extrafield_global, uInt size_extrafield_global, + const char* comment, int method, int level) +{ + return zipOpenNewFileInZip4_64 (file, filename, zipfi, + extrafield_local, size_extrafield_local, + extrafield_global, size_extrafield_global, + comment, method, level, 0, + -MAX_WBITS, DEF_MEM_LEVEL, Z_DEFAULT_STRATEGY, + NULL, 0, VERSIONMADEBY, 0, 0); +} + +local int zip64FlushWriteBuffer(zip64_internal* zi) +{ + int err=ZIP_OK; + + if (zi->ci.encrypt != 0) + { +#ifndef NOCRYPT + uInt i; + int t; + for (i=0;i<zi->ci.pos_in_buffered_data;i++) + zi->ci.buffered_data[i] = zencode(zi->ci.keys, zi->ci.pcrc_32_tab, zi->ci.buffered_data[i],t); +#endif + } + + if (ZWRITE64(zi->z_filefunc,zi->filestream,zi->ci.buffered_data,zi->ci.pos_in_buffered_data) != zi->ci.pos_in_buffered_data) + err = ZIP_ERRNO; + + zi->ci.totalCompressedData += zi->ci.pos_in_buffered_data; + +#ifdef HAVE_BZIP2 + if(zi->ci.method == Z_BZIP2ED) + { + zi->ci.totalUncompressedData += zi->ci.bstream.total_in_lo32; + zi->ci.bstream.total_in_lo32 = 0; + zi->ci.bstream.total_in_hi32 = 0; + } + else +#endif + { + zi->ci.totalUncompressedData += zi->ci.stream.total_in; + zi->ci.stream.total_in = 0; + } + + + zi->ci.pos_in_buffered_data = 0; + + return err; +} + +extern int ZEXPORT zipWriteInFileInZip (zipFile file,const void* buf,unsigned int len) +{ + zip64_internal* zi; + int err=ZIP_OK; + + if (file == NULL) + return ZIP_PARAMERROR; + zi = (zip64_internal*)file; + + if (zi->in_opened_file_inzip == 0) + return ZIP_PARAMERROR; + + zi->ci.crc32 = crc32(zi->ci.crc32,buf,(uInt)len); + +#ifdef HAVE_BZIP2 + if(zi->ci.method == Z_BZIP2ED && (!zi->ci.raw)) + { + zi->ci.bstream.next_in = (void*)buf; + zi->ci.bstream.avail_in = len; + err = BZ_RUN_OK; + + while ((err==BZ_RUN_OK) && (zi->ci.bstream.avail_in>0)) + { + if (zi->ci.bstream.avail_out == 0) + { + if (zip64FlushWriteBuffer(zi) == ZIP_ERRNO) + err = ZIP_ERRNO; + zi->ci.bstream.avail_out = (uInt)Z_BUFSIZE; + zi->ci.bstream.next_out = (char*)zi->ci.buffered_data; + } + + + if(err != BZ_RUN_OK) + break; + + if ((zi->ci.method == Z_BZIP2ED) && (!zi->ci.raw)) + { + uLong uTotalOutBefore_lo = zi->ci.bstream.total_out_lo32; +// uLong uTotalOutBefore_hi = zi->ci.bstream.total_out_hi32; + err=BZ2_bzCompress(&zi->ci.bstream, BZ_RUN); + + zi->ci.pos_in_buffered_data += (uInt)(zi->ci.bstream.total_out_lo32 - uTotalOutBefore_lo) ; + } + } + + if(err == BZ_RUN_OK) + err = ZIP_OK; + } + else +#endif + { + zi->ci.stream.next_in = (Bytef*)buf; + zi->ci.stream.avail_in = len; + + while ((err==ZIP_OK) && (zi->ci.stream.avail_in>0)) + { + if (zi->ci.stream.avail_out == 0) + { + if (zip64FlushWriteBuffer(zi) == ZIP_ERRNO) + err = ZIP_ERRNO; + zi->ci.stream.avail_out = (uInt)Z_BUFSIZE; + zi->ci.stream.next_out = zi->ci.buffered_data; + } + + + if(err != ZIP_OK) + break; + + if ((zi->ci.method == Z_DEFLATED) && (!zi->ci.raw)) + { + uLong uTotalOutBefore = zi->ci.stream.total_out; + err=deflate(&zi->ci.stream, Z_NO_FLUSH); + if(uTotalOutBefore > zi->ci.stream.total_out) + { + int bBreak = 0; + bBreak++; + } + + zi->ci.pos_in_buffered_data += (uInt)(zi->ci.stream.total_out - uTotalOutBefore) ; + } + else + { + uInt copy_this,i; + if (zi->ci.stream.avail_in < zi->ci.stream.avail_out) + copy_this = zi->ci.stream.avail_in; + else + copy_this = zi->ci.stream.avail_out; + + for (i = 0; i < copy_this; i++) + *(((char*)zi->ci.stream.next_out)+i) = + *(((const char*)zi->ci.stream.next_in)+i); + { + zi->ci.stream.avail_in -= copy_this; + zi->ci.stream.avail_out-= copy_this; + zi->ci.stream.next_in+= copy_this; + zi->ci.stream.next_out+= copy_this; + zi->ci.stream.total_in+= copy_this; + zi->ci.stream.total_out+= copy_this; + zi->ci.pos_in_buffered_data += copy_this; + } + } + }// while(...) + } + + return err; +} + +extern int ZEXPORT zipCloseFileInZipRaw (zipFile file, uLong uncompressed_size, uLong crc32) +{ + return zipCloseFileInZipRaw64 (file, uncompressed_size, crc32); +} + +extern int ZEXPORT zipCloseFileInZipRaw64 (zipFile file, ZPOS64_T uncompressed_size, uLong crc32) +{ + zip64_internal* zi; + ZPOS64_T compressed_size; + uLong invalidValue = 0xffffffff; + short datasize = 0; + int err=ZIP_OK; + + if (file == NULL) + return ZIP_PARAMERROR; + zi = (zip64_internal*)file; + + if (zi->in_opened_file_inzip == 0) + return ZIP_PARAMERROR; + zi->ci.stream.avail_in = 0; + + if ((zi->ci.method == Z_DEFLATED) && (!zi->ci.raw)) + { + while (err==ZIP_OK) + { + uLong uTotalOutBefore; + if (zi->ci.stream.avail_out == 0) + { + if (zip64FlushWriteBuffer(zi) == ZIP_ERRNO) + err = ZIP_ERRNO; + zi->ci.stream.avail_out = (uInt)Z_BUFSIZE; + zi->ci.stream.next_out = zi->ci.buffered_data; + } + uTotalOutBefore = zi->ci.stream.total_out; + err=deflate(&zi->ci.stream, Z_FINISH); + zi->ci.pos_in_buffered_data += (uInt)(zi->ci.stream.total_out - uTotalOutBefore) ; + } + } + else if ((zi->ci.method == Z_BZIP2ED) && (!zi->ci.raw)) + { +#ifdef HAVE_BZIP2 + err = BZ_FINISH_OK; + while (err==BZ_FINISH_OK) + { + uLong uTotalOutBefore; + if (zi->ci.bstream.avail_out == 0) + { + if (zip64FlushWriteBuffer(zi) == ZIP_ERRNO) + err = ZIP_ERRNO; + zi->ci.bstream.avail_out = (uInt)Z_BUFSIZE; + zi->ci.bstream.next_out = (char*)zi->ci.buffered_data; + } + uTotalOutBefore = zi->ci.bstream.total_out_lo32; + err=BZ2_bzCompress(&zi->ci.bstream, BZ_FINISH); + if(err == BZ_STREAM_END) + err = Z_STREAM_END; + + zi->ci.pos_in_buffered_data += (uInt)(zi->ci.bstream.total_out_lo32 - uTotalOutBefore); + } + + if(err == BZ_FINISH_OK) + err = ZIP_OK; +#endif + } + + if (err==Z_STREAM_END) + err=ZIP_OK; /* this is normal */ + + if ((zi->ci.pos_in_buffered_data>0) && (err==ZIP_OK)) + { + if (zip64FlushWriteBuffer(zi)==ZIP_ERRNO) + err = ZIP_ERRNO; + } + + if ((zi->ci.method == Z_DEFLATED) && (!zi->ci.raw)) + { + int tmp_err = deflateEnd(&zi->ci.stream); + if (err == ZIP_OK) + err = tmp_err; + zi->ci.stream_initialised = 0; + } +#ifdef HAVE_BZIP2 + else if((zi->ci.method == Z_BZIP2ED) && (!zi->ci.raw)) + { + int tmperr = BZ2_bzCompressEnd(&zi->ci.bstream); + if (err==ZIP_OK) + err = tmperr; + zi->ci.stream_initialised = 0; + } +#endif + + if (!zi->ci.raw) + { + crc32 = (uLong)zi->ci.crc32; + uncompressed_size = zi->ci.totalUncompressedData; + } + compressed_size = zi->ci.totalCompressedData; + +# ifndef NOCRYPT + compressed_size += zi->ci.crypt_header_size; +# endif + + // update Current Item crc and sizes, + if(compressed_size >= 0xffffffff || uncompressed_size >= 0xffffffff || zi->ci.pos_local_header >= 0xffffffff) + { + /*version Made by*/ + zip64local_putValue_inmemory(zi->ci.central_header+4,(uLong)45,2); + /*version needed*/ + zip64local_putValue_inmemory(zi->ci.central_header+6,(uLong)45,2); + + } + + zip64local_putValue_inmemory(zi->ci.central_header+16,crc32,4); /*crc*/ + + + if(compressed_size >= 0xffffffff) + zip64local_putValue_inmemory(zi->ci.central_header+20, invalidValue,4); /*compr size*/ + else + zip64local_putValue_inmemory(zi->ci.central_header+20, compressed_size,4); /*compr size*/ + + /// set internal file attributes field + if (zi->ci.stream.data_type == Z_ASCII) + zip64local_putValue_inmemory(zi->ci.central_header+36,(uLong)Z_ASCII,2); + + if(uncompressed_size >= 0xffffffff) + zip64local_putValue_inmemory(zi->ci.central_header+24, invalidValue,4); /*uncompr size*/ + else + zip64local_putValue_inmemory(zi->ci.central_header+24, uncompressed_size,4); /*uncompr size*/ + + // Add ZIP64 extra info field for uncompressed size + if(uncompressed_size >= 0xffffffff) + datasize += 8; + + // Add ZIP64 extra info field for compressed size + if(compressed_size >= 0xffffffff) + datasize += 8; + + // Add ZIP64 extra info field for relative offset to local file header of current file + if(zi->ci.pos_local_header >= 0xffffffff) + datasize += 8; + + if(datasize > 0) + { + char* p = NULL; + + if((uLong)(datasize + 4) > zi->ci.size_centralExtraFree) + { + // we can not write more data to the buffer that we have room for. + return ZIP_BADZIPFILE; + } + + p = zi->ci.central_header + zi->ci.size_centralheader; + + // Add Extra Information Header for 'ZIP64 information' + zip64local_putValue_inmemory(p, 0x0001, 2); // HeaderID + p += 2; + zip64local_putValue_inmemory(p, datasize, 2); // DataSize + p += 2; + + if(uncompressed_size >= 0xffffffff) + { + zip64local_putValue_inmemory(p, uncompressed_size, 8); + p += 8; + } + + if(compressed_size >= 0xffffffff) + { + zip64local_putValue_inmemory(p, compressed_size, 8); + p += 8; + } + + if(zi->ci.pos_local_header >= 0xffffffff) + { + zip64local_putValue_inmemory(p, zi->ci.pos_local_header, 8); + p += 8; + } + + // Update how much extra free space we got in the memory buffer + // and increase the centralheader size so the new ZIP64 fields are included + // ( 4 below is the size of HeaderID and DataSize field ) + zi->ci.size_centralExtraFree -= datasize + 4; + zi->ci.size_centralheader += datasize + 4; + + // Update the extra info size field + zi->ci.size_centralExtra += datasize + 4; + zip64local_putValue_inmemory(zi->ci.central_header+30,(uLong)zi->ci.size_centralExtra,2); + } + + if (err==ZIP_OK) + err = add_data_in_datablock(&zi->central_dir, zi->ci.central_header, (uLong)zi->ci.size_centralheader); + + free(zi->ci.central_header); + + if (err==ZIP_OK) + { + // Update the LocalFileHeader with the new values. + + ZPOS64_T cur_pos_inzip = ZTELL64(zi->z_filefunc,zi->filestream); + + if (ZSEEK64(zi->z_filefunc,zi->filestream, zi->ci.pos_local_header + 14,ZLIB_FILEFUNC_SEEK_SET)!=0) + err = ZIP_ERRNO; + + if (err==ZIP_OK) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,crc32,4); /* crc 32, unknown */ + + if(uncompressed_size >= 0xffffffff || compressed_size >= 0xffffffff ) + { + if(zi->ci.pos_zip64extrainfo > 0) + { + // Update the size in the ZIP64 extended field. + if (ZSEEK64(zi->z_filefunc,zi->filestream, zi->ci.pos_zip64extrainfo + 4,ZLIB_FILEFUNC_SEEK_SET)!=0) + err = ZIP_ERRNO; + + if (err==ZIP_OK) /* compressed size, unknown */ + err = zip64local_putValue(&zi->z_filefunc, zi->filestream, uncompressed_size, 8); + + if (err==ZIP_OK) /* uncompressed size, unknown */ + err = zip64local_putValue(&zi->z_filefunc, zi->filestream, compressed_size, 8); + } + else + err = ZIP_BADZIPFILE; // Caller passed zip64 = 0, so no room for zip64 info -> fatal + } + else + { + if (err==ZIP_OK) /* compressed size, unknown */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,compressed_size,4); + + if (err==ZIP_OK) /* uncompressed size, unknown */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,uncompressed_size,4); + } + + if (ZSEEK64(zi->z_filefunc,zi->filestream, cur_pos_inzip,ZLIB_FILEFUNC_SEEK_SET)!=0) + err = ZIP_ERRNO; + } + + zi->number_entry ++; + zi->in_opened_file_inzip = 0; + + return err; +} + +extern int ZEXPORT zipCloseFileInZip (zipFile file) +{ + return zipCloseFileInZipRaw (file,0,0); +} + +int Write_Zip64EndOfCentralDirectoryLocator(zip64_internal* zi, ZPOS64_T zip64eocd_pos_inzip) +{ + int err = ZIP_OK; + ZPOS64_T pos = zip64eocd_pos_inzip - zi->add_position_when_writting_offset; + + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)ZIP64ENDLOCHEADERMAGIC,4); + + /*num disks*/ + if (err==ZIP_OK) /* number of the disk with the start of the central directory */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0,4); + + /*relative offset*/ + if (err==ZIP_OK) /* Relative offset to the Zip64EndOfCentralDirectory */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream, pos,8); + + /*total disks*/ /* Do not support spawning of disk so always say 1 here*/ + if (err==ZIP_OK) /* number of the disk with the start of the central directory */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)1,4); + + return err; +} + +int Write_Zip64EndOfCentralDirectoryRecord(zip64_internal* zi, uLong size_centraldir, ZPOS64_T centraldir_pos_inzip) +{ + int err = ZIP_OK; + + uLong Zip64DataSize = 44; + + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)ZIP64ENDHEADERMAGIC,4); + + if (err==ZIP_OK) /* size of this 'zip64 end of central directory' */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(ZPOS64_T)Zip64DataSize,8); // why ZPOS64_T of this ? + + if (err==ZIP_OK) /* version made by */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)45,2); + + if (err==ZIP_OK) /* version needed */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)45,2); + + if (err==ZIP_OK) /* number of this disk */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0,4); + + if (err==ZIP_OK) /* number of the disk with the start of the central directory */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0,4); + + if (err==ZIP_OK) /* total number of entries in the central dir on this disk */ + err = zip64local_putValue(&zi->z_filefunc, zi->filestream, zi->number_entry, 8); + + if (err==ZIP_OK) /* total number of entries in the central dir */ + err = zip64local_putValue(&zi->z_filefunc, zi->filestream, zi->number_entry, 8); + + if (err==ZIP_OK) /* size of the central directory */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(ZPOS64_T)size_centraldir,8); + + if (err==ZIP_OK) /* offset of start of central directory with respect to the starting disk number */ + { + ZPOS64_T pos = centraldir_pos_inzip - zi->add_position_when_writting_offset; + err = zip64local_putValue(&zi->z_filefunc,zi->filestream, (ZPOS64_T)pos,8); + } + return err; +} +int Write_EndOfCentralDirectoryRecord(zip64_internal* zi, uLong size_centraldir, ZPOS64_T centraldir_pos_inzip) +{ + int err = ZIP_OK; + + /*signature*/ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)ENDHEADERMAGIC,4); + + if (err==ZIP_OK) /* number of this disk */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0,2); + + if (err==ZIP_OK) /* number of the disk with the start of the central directory */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0,2); + + if (err==ZIP_OK) /* total number of entries in the central dir on this disk */ + { + { + if(zi->number_entry >= 0xFFFF) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0xffff,2); // use value in ZIP64 record + else + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)zi->number_entry,2); + } + } + + if (err==ZIP_OK) /* total number of entries in the central dir */ + { + if(zi->number_entry >= 0xFFFF) + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)0xffff,2); // use value in ZIP64 record + else + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)zi->number_entry,2); + } + + if (err==ZIP_OK) /* size of the central directory */ + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)size_centraldir,4); + + if (err==ZIP_OK) /* offset of start of central directory with respect to the starting disk number */ + { + ZPOS64_T pos = centraldir_pos_inzip - zi->add_position_when_writting_offset; + if(pos >= 0xffffffff) + { + err = zip64local_putValue(&zi->z_filefunc,zi->filestream, (uLong)0xffffffff,4); + } + else + err = zip64local_putValue(&zi->z_filefunc,zi->filestream, (uLong)(centraldir_pos_inzip - zi->add_position_when_writting_offset),4); + } + + return err; +} + +int Write_GlobalComment(zip64_internal* zi, const char* global_comment) +{ + int err = ZIP_OK; + uInt size_global_comment = 0; + + if(global_comment != NULL) + size_global_comment = (uInt)strlen(global_comment); + + err = zip64local_putValue(&zi->z_filefunc,zi->filestream,(uLong)size_global_comment,2); + + if (err == ZIP_OK && size_global_comment > 0) + { + if (ZWRITE64(zi->z_filefunc,zi->filestream, global_comment, size_global_comment) != size_global_comment) + err = ZIP_ERRNO; + } + return err; +} + +extern int ZEXPORT zipClose (zipFile file, const char* global_comment) +{ + zip64_internal* zi; + int err = 0; + uLong size_centraldir = 0; + ZPOS64_T centraldir_pos_inzip; + ZPOS64_T pos; + + if (file == NULL) + return ZIP_PARAMERROR; + + zi = (zip64_internal*)file; + + if (zi->in_opened_file_inzip == 1) + { + err = zipCloseFileInZip (file); + } + +#ifndef NO_ADDFILEINEXISTINGZIP + if (global_comment==NULL) + global_comment = zi->globalcomment; +#endif + + centraldir_pos_inzip = ZTELL64(zi->z_filefunc,zi->filestream); + + if (err==ZIP_OK) + { + linkedlist_datablock_internal* ldi = zi->central_dir.first_block; + while (ldi!=NULL) + { + if ((err==ZIP_OK) && (ldi->filled_in_this_block>0)) + { + if (ZWRITE64(zi->z_filefunc,zi->filestream, ldi->data, ldi->filled_in_this_block) != ldi->filled_in_this_block) + err = ZIP_ERRNO; + } + + size_centraldir += ldi->filled_in_this_block; + ldi = ldi->next_datablock; + } + } + free_linkedlist(&(zi->central_dir)); + + pos = centraldir_pos_inzip - zi->add_position_when_writting_offset; + if(pos >= 0xffffffff || zi->number_entry > 0xFFFF) + { + ZPOS64_T Zip64EOCDpos = ZTELL64(zi->z_filefunc,zi->filestream); + Write_Zip64EndOfCentralDirectoryRecord(zi, size_centraldir, centraldir_pos_inzip); + + Write_Zip64EndOfCentralDirectoryLocator(zi, Zip64EOCDpos); + } + + if (err==ZIP_OK) + err = Write_EndOfCentralDirectoryRecord(zi, size_centraldir, centraldir_pos_inzip); + + if(err == ZIP_OK) + err = Write_GlobalComment(zi, global_comment); + + if (ZCLOSE64(zi->z_filefunc,zi->filestream) != 0) + if (err == ZIP_OK) + err = ZIP_ERRNO; + +#ifndef NO_ADDFILEINEXISTINGZIP + TRYFREE(zi->globalcomment); +#endif + TRYFREE(zi); + + return err; +} + +extern int ZEXPORT zipRemoveExtraInfoBlock (char* pData, int* dataLen, short sHeader) +{ + char* p = pData; + int size = 0; + char* pNewHeader; + char* pTmp; + short header; + short dataSize; + + int retVal = ZIP_OK; + + if(pData == NULL || *dataLen < 4) + return ZIP_PARAMERROR; + + pNewHeader = (char*)ALLOC(*dataLen); + pTmp = pNewHeader; + + while(p < (pData + *dataLen)) + { + header = *(short*)p; + dataSize = *(((short*)p)+1); + + if( header == sHeader ) // Header found. + { + p += dataSize + 4; // skip it. do not copy to temp buffer + } + else + { + // Extra Info block should not be removed, So copy it to the temp buffer. + memcpy(pTmp, p, dataSize + 4); + p += dataSize + 4; + size += dataSize + 4; + } + + } + + if(size < *dataLen) + { + // clean old extra info block. + memset(pData,0, *dataLen); + + // copy the new extra info block over the old + if(size > 0) + memcpy(pData, pNewHeader, size); + + // set the new extra info size + *dataLen = size; + + retVal = ZIP_OK; + } + else + retVal = ZIP_ERRNO; + + TRYFREE(pNewHeader); + + return retVal; +}
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/minizip/zip.h Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,362 @@ +/* zip.h -- IO on .zip files using zlib + Version 1.1, February 14h, 2010 + part of the MiniZip project - ( http://www.winimage.com/zLibDll/minizip.html ) + + Copyright (C) 1998-2010 Gilles Vollant (minizip) ( http://www.winimage.com/zLibDll/minizip.html ) + + Modifications for Zip64 support + Copyright (C) 2009-2010 Mathias Svensson ( http://result42.com ) + + For more info read MiniZip_info.txt + + --------------------------------------------------------------------------- + + Condition of use and distribution are the same than zlib : + + This software is provided 'as-is', without any express or implied + warranty. In no event will the authors be held liable for any damages + arising from the use of this software. + + Permission is granted to anyone to use this software for any purpose, + including commercial applications, and to alter it and redistribute it + freely, subject to the following restrictions: + + 1. The origin of this software must not be misrepresented; you must not + claim that you wrote the original software. If you use this software + in a product, an acknowledgment in the product documentation would be + appreciated but is not required. + 2. Altered source versions must be plainly marked as such, and must not be + misrepresented as being the original software. + 3. This notice may not be removed or altered from any source distribution. + + --------------------------------------------------------------------------- + + Changes + + See header of zip.h + +*/ + +#ifndef _zip12_H +#define _zip12_H + +#ifdef __cplusplus +extern "C" { +#endif + +//#define HAVE_BZIP2 + +#ifndef _ZLIB_H +#include "zlib.h" +#endif + +#ifndef _ZLIBIOAPI_H +#include "ioapi.h" +#endif + +#ifdef HAVE_BZIP2 +#include "bzlib.h" +#endif + +#define Z_BZIP2ED 12 + +#if defined(STRICTZIP) || defined(STRICTZIPUNZIP) +/* like the STRICT of WIN32, we define a pointer that cannot be converted + from (void*) without cast */ +typedef struct TagzipFile__ { int unused; } zipFile__; +typedef zipFile__ *zipFile; +#else +typedef voidp zipFile; +#endif + +#define ZIP_OK (0) +#define ZIP_EOF (0) +#define ZIP_ERRNO (Z_ERRNO) +#define ZIP_PARAMERROR (-102) +#define ZIP_BADZIPFILE (-103) +#define ZIP_INTERNALERROR (-104) + +#ifndef DEF_MEM_LEVEL +# if MAX_MEM_LEVEL >= 8 +# define DEF_MEM_LEVEL 8 +# else +# define DEF_MEM_LEVEL MAX_MEM_LEVEL +# endif +#endif +/* default memLevel */ + +/* tm_zip contain date/time info */ +typedef struct tm_zip_s +{ + uInt tm_sec; /* seconds after the minute - [0,59] */ + uInt tm_min; /* minutes after the hour - [0,59] */ + uInt tm_hour; /* hours since midnight - [0,23] */ + uInt tm_mday; /* day of the month - [1,31] */ + uInt tm_mon; /* months since January - [0,11] */ + uInt tm_year; /* years - [1980..2044] */ +} tm_zip; + +typedef struct +{ + tm_zip tmz_date; /* date in understandable format */ + uLong dosDate; /* if dos_date == 0, tmu_date is used */ +/* uLong flag; */ /* general purpose bit flag 2 bytes */ + + uLong internal_fa; /* internal file attributes 2 bytes */ + uLong external_fa; /* external file attributes 4 bytes */ +} zip_fileinfo; + +typedef const char* zipcharpc; + + +#define APPEND_STATUS_CREATE (0) +#define APPEND_STATUS_CREATEAFTER (1) +#define APPEND_STATUS_ADDINZIP (2) + +extern zipFile ZEXPORT zipOpen OF((const char *pathname, int append)); +extern zipFile ZEXPORT zipOpen64 OF((const void *pathname, int append)); +/* + Create a zipfile. + pathname contain on Windows XP a filename like "c:\\zlib\\zlib113.zip" or on + an Unix computer "zlib/zlib113.zip". + if the file pathname exist and append==APPEND_STATUS_CREATEAFTER, the zip + will be created at the end of the file. + (useful if the file contain a self extractor code) + if the file pathname exist and append==APPEND_STATUS_ADDINZIP, we will + add files in existing zip (be sure you don't add file that doesn't exist) + If the zipfile cannot be opened, the return value is NULL. + Else, the return value is a zipFile Handle, usable with other function + of this zip package. +*/ + +/* Note : there is no delete function into a zipfile. + If you want delete file into a zipfile, you must open a zipfile, and create another + Of couse, you can use RAW reading and writing to copy the file you did not want delte +*/ + +extern zipFile ZEXPORT zipOpen2 OF((const char *pathname, + int append, + zipcharpc* globalcomment, + zlib_filefunc_def* pzlib_filefunc_def)); + +extern zipFile ZEXPORT zipOpen2_64 OF((const void *pathname, + int append, + zipcharpc* globalcomment, + zlib_filefunc64_def* pzlib_filefunc_def)); + +extern int ZEXPORT zipOpenNewFileInZip OF((zipFile file, + const char* filename, + const zip_fileinfo* zipfi, + const void* extrafield_local, + uInt size_extrafield_local, + const void* extrafield_global, + uInt size_extrafield_global, + const char* comment, + int method, + int level)); + +extern int ZEXPORT zipOpenNewFileInZip64 OF((zipFile file, + const char* filename, + const zip_fileinfo* zipfi, + const void* extrafield_local, + uInt size_extrafield_local, + const void* extrafield_global, + uInt size_extrafield_global, + const char* comment, + int method, + int level, + int zip64)); + +/* + Open a file in the ZIP for writing. + filename : the filename in zip (if NULL, '-' without quote will be used + *zipfi contain supplemental information + if extrafield_local!=NULL and size_extrafield_local>0, extrafield_local + contains the extrafield data the the local header + if extrafield_global!=NULL and size_extrafield_global>0, extrafield_global + contains the extrafield data the the local header + if comment != NULL, comment contain the comment string + method contain the compression method (0 for store, Z_DEFLATED for deflate) + level contain the level of compression (can be Z_DEFAULT_COMPRESSION) + zip64 is set to 1 if a zip64 extended information block should be added to the local file header. + this MUST be '1' if the uncompressed size is >= 0xffffffff. + +*/ + + +extern int ZEXPORT zipOpenNewFileInZip2 OF((zipFile file, + const char* filename, + const zip_fileinfo* zipfi, + const void* extrafield_local, + uInt size_extrafield_local, + const void* extrafield_global, + uInt size_extrafield_global, + const char* comment, + int method, + int level, + int raw)); + + +extern int ZEXPORT zipOpenNewFileInZip2_64 OF((zipFile file, + const char* filename, + const zip_fileinfo* zipfi, + const void* extrafield_local, + uInt size_extrafield_local, + const void* extrafield_global, + uInt size_extrafield_global, + const char* comment, + int method, + int level, + int raw, + int zip64)); +/* + Same than zipOpenNewFileInZip, except if raw=1, we write raw file + */ + +extern int ZEXPORT zipOpenNewFileInZip3 OF((zipFile file, + const char* filename, + const zip_fileinfo* zipfi, + const void* extrafield_local, + uInt size_extrafield_local, + const void* extrafield_global, + uInt size_extrafield_global, + const char* comment, + int method, + int level, + int raw, + int windowBits, + int memLevel, + int strategy, + const char* password, + uLong crcForCrypting)); + +extern int ZEXPORT zipOpenNewFileInZip3_64 OF((zipFile file, + const char* filename, + const zip_fileinfo* zipfi, + const void* extrafield_local, + uInt size_extrafield_local, + const void* extrafield_global, + uInt size_extrafield_global, + const char* comment, + int method, + int level, + int raw, + int windowBits, + int memLevel, + int strategy, + const char* password, + uLong crcForCrypting, + int zip64 + )); + +/* + Same than zipOpenNewFileInZip2, except + windowBits,memLevel,,strategy : see parameter strategy in deflateInit2 + password : crypting password (NULL for no crypting) + crcForCrypting : crc of file to compress (needed for crypting) + */ + +extern int ZEXPORT zipOpenNewFileInZip4 OF((zipFile file, + const char* filename, + const zip_fileinfo* zipfi, + const void* extrafield_local, + uInt size_extrafield_local, + const void* extrafield_global, + uInt size_extrafield_global, + const char* comment, + int method, + int level, + int raw, + int windowBits, + int memLevel, + int strategy, + const char* password, + uLong crcForCrypting, + uLong versionMadeBy, + uLong flagBase + )); + + +extern int ZEXPORT zipOpenNewFileInZip4_64 OF((zipFile file, + const char* filename, + const zip_fileinfo* zipfi, + const void* extrafield_local, + uInt size_extrafield_local, + const void* extrafield_global, + uInt size_extrafield_global, + const char* comment, + int method, + int level, + int raw, + int windowBits, + int memLevel, + int strategy, + const char* password, + uLong crcForCrypting, + uLong versionMadeBy, + uLong flagBase, + int zip64 + )); +/* + Same than zipOpenNewFileInZip4, except + versionMadeBy : value for Version made by field + flag : value for flag field (compression level info will be added) + */ + + +extern int ZEXPORT zipWriteInFileInZip OF((zipFile file, + const void* buf, + unsigned len)); +/* + Write data in the zipfile +*/ + +extern int ZEXPORT zipCloseFileInZip OF((zipFile file)); +/* + Close the current file in the zipfile +*/ + +extern int ZEXPORT zipCloseFileInZipRaw OF((zipFile file, + uLong uncompressed_size, + uLong crc32)); + +extern int ZEXPORT zipCloseFileInZipRaw64 OF((zipFile file, + ZPOS64_T uncompressed_size, + uLong crc32)); + +/* + Close the current file in the zipfile, for file opened with + parameter raw=1 in zipOpenNewFileInZip2 + uncompressed_size and crc32 are value for the uncompressed size +*/ + +extern int ZEXPORT zipClose OF((zipFile file, + const char* global_comment)); +/* + Close the zipfile +*/ + + +extern int ZEXPORT zipRemoveExtraInfoBlock OF((char* pData, int* dataLen, short sHeader)); +/* + zipRemoveExtraInfoBlock - Added by Mathias Svensson + + Remove extra information block from a extra information data for the local file header or central directory header + + It is needed to remove ZIP64 extra information blocks when before data is written if using RAW mode. + + 0x0001 is the signature header for the ZIP64 extra information blocks + + usage. + Remove ZIP64 Extra information from a central director extra field data + zipRemoveExtraInfoBlock(pCenDirExtraFieldData, &nCenDirExtraFieldDataLen, 0x0001); + + Remove ZIP64 Extra information from a Local File Header extra field data + zipRemoveExtraInfoBlock(pLocalHeaderExtraFieldData, &nLocalHeaderExtraFieldDataLen, 0x0001); +*/ + +#ifdef __cplusplus +} +#endif + +#endif /* _zip64_H */
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/patch/NOTES.txt Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,70 @@ +=========== +INFORMATION +=========== + +This is a precompiled version of the "patch" standard tool for +Windows. It was compiled using the MSYS framework. + +The binaries originate from the "Git for Windows 1.9.5" package +(https://msysgit.github.io/). The build instructions have been +provided on the discussion group of Git for Windows [1]. They are +copied/pasted below for reference. + + + +================ +UPSTREAM PROJECT +================ + +URL to the upstream project: +http://savannah.gnu.org/projects/patch/ + +License of patch: GPLv2 (GNU General Public License v2) + +Copyright (C) 1988 Larry Wall "with lots o' patches by Paul Eggert" +Copyright (C) 1997 Free Software Foundation, Inc. + + + +====================== +BUILD INSTRUCTIONS [1] +====================== + +The easiest way to find out about this is to install the Git SDK, then +run + + pacman -Qu $(which patch.exe) + +to find out which package contains the `patch.exe` binary. It so happens +to be patch.2.7.5-1 at the moment. Since this is an MSys2 package (not a +MinGW one, otherwise the patch utility would be in /mingw64/bin/, not +/usr/bin/), this package is built from the recipes in + + https://github.com/msys2/MSYS2-packages + +The `patch` package is obviously built from the subdirectory + + https://github.com/Alexpux/MSYS2-packages/tree/master/patch + +and the PKGBUILD file specifies that the source is fetched from +ftp://ftp.gnu.org/gnu/patch/patch-2.7.5.tar.xz: + +https://github.com/Alexpux/MSYS2-packages/blob/900744becd072f687029b0f830ab6fe95cf533d6/patch/PKGBUILD#L14 + +and then these two patches are applied before building: + +https://github.com/Alexpux/MSYS2-packages/blob/900744becd072f687029b0f830ab6fe95cf533d6/patch/msys2-patch-2.7.1.patch + +and + +https://github.com/Alexpux/MSYS2-packages/blob/900744becd072f687029b0f830ab6fe95cf533d6/patch/msys2-patch-manifest.patch + +As you can see, some light changes are applied, i.e. `patch.exe` will +always write in binary mode with MSys2, and the executable will have a +manifest embedded that allows it to run as non-administrator. + +Ciao, +Johannes Schindelin + + +[1] https://groups.google.com/d/msg/git-for-windows/xWyVr4z6Ri0/6RKeV028EAAJ
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/ThirdParty/patch/patch.exe.manifest Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,19 @@ +<?xml version="1.0" encoding="UTF-8" standalone="yes"?> +<assembly xmlns="urn:schemas-microsoft-com:asm.v1" manifestVersion="1.0"> + <assemblyIdentity version="7.95.0.0" + processorArchitecture="X86" + name="patch.exe" + type="win32"/> + + <!-- Identify the application security requirements. --> + <trustInfo xmlns="urn:schemas-microsoft-com:asm.v3"> + <security> + <requestedPrivileges> + <requestedExecutionLevel + level="asInvoker" + uiAccess="false"/> + </requestedPrivileges> + </security> + </trustInfo> +</assembly> +
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/WindowsResources.py Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,90 @@ +#!/usr/bin/python + +# Orthanc - A Lightweight, RESTful DICOM Store +# Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics +# Department, University Hospital of Liege, Belgium +# Copyright (C) 2017-2018 Osimis S.A., Belgium +# +# This program is free software: you can redistribute it and/or +# modify it under the terms of the GNU General Public License as +# published by the Free Software Foundation, either version 3 of the +# License, or (at your option) any later version. +# +# In addition, as a special exception, the copyright holders of this +# program give permission to link the code of its release with the +# OpenSSL project's "OpenSSL" library (or with modified versions of it +# that use the same license as the "OpenSSL" library), and distribute +# the linked executables. You must obey the GNU General Public License +# in all respects for all of the code used other than "OpenSSL". If you +# modify file(s) with this exception, you may extend this exception to +# your version of the file(s), but you are not obligated to do so. If +# you do not wish to do so, delete this exception statement from your +# version. If you delete this exception statement from all source files +# in the program, then also delete it here. +# +# This program is distributed in the hope that it will be useful, but +# WITHOUT ANY WARRANTY; without even the implied warranty of +# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU +# General Public License for more details. +# +# You should have received a copy of the GNU General Public License +# along with this program. If not, see <http://www.gnu.org/licenses/>. + + +import os +import sys +import datetime + +if len(sys.argv) != 5: + sys.stderr.write('Usage: %s <Version> <ProductName> <Filename> <Description>\n\n' % sys.argv[0]) + sys.stderr.write('Example: %s 0.9.1 Orthanc Orthanc.exe "Lightweight, RESTful DICOM server for medical imaging"\n' % sys.argv[0]) + sys.exit(-1) + +SOURCE = os.path.join(os.path.dirname(__file__), 'WindowsResources.rc') + +VERSION = sys.argv[1] +PRODUCT = sys.argv[2] +FILENAME = sys.argv[3] +DESCRIPTION = sys.argv[4] + +if VERSION == 'mainline': + VERSION = '999.999.999' + RELEASE = 'This is a mainline build, not an official release' +else: + RELEASE = 'Release %s' % VERSION + +v = VERSION.split('.') +if len(v) != 2 and len(v) != 3: + sys.stderr.write('Bad version number: %s\n' % VERSION) + sys.exit(-1) + +if len(v) == 2: + v.append('0') + +extension = os.path.splitext(FILENAME)[1] +if extension.lower() == '.dll': + BLOCK = '040904E4' + TYPE = 'VFT_DLL' +elif extension.lower() == '.exe': + #BLOCK = '040904B0' # LANG_ENGLISH/SUBLANG_ENGLISH_US, + BLOCK = '040904E4' # Lang=US English, CharSet=Windows Multilingual + TYPE = 'VFT_APP' +else: + sys.stderr.write('Unsupported extension (.EXE or .DLL only): %s\n' % extension) + sys.exit(-1) + + +with open(SOURCE, 'r') as source: + content = source.read() + content = content.replace('${VERSION_MAJOR}', v[0]) + content = content.replace('${VERSION_MINOR}', v[1]) + content = content.replace('${VERSION_PATCH}', v[2]) + content = content.replace('${RELEASE}', RELEASE) + content = content.replace('${DESCRIPTION}', DESCRIPTION) + content = content.replace('${PRODUCT}', PRODUCT) + content = content.replace('${FILENAME}', FILENAME) + content = content.replace('${YEAR}', str(datetime.datetime.now().year)) + content = content.replace('${BLOCK}', BLOCK) + content = content.replace('${TYPE}', TYPE) + + sys.stdout.write(content)
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/Orthanc/Resources/WindowsResources.rc Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,30 @@ +#include <winver.h> + +VS_VERSION_INFO VERSIONINFO + FILEVERSION ${VERSION_MAJOR},${VERSION_MINOR},0,${VERSION_PATCH} + PRODUCTVERSION ${VERSION_MAJOR},${VERSION_MINOR},0,0 + FILEOS VOS_NT_WINDOWS32 + FILETYPE ${TYPE} + BEGIN + BLOCK "StringFileInfo" + BEGIN + BLOCK "${BLOCK}" + BEGIN + VALUE "Comments", "${RELEASE}" + VALUE "CompanyName", "University Hospital of Liege, Belgium" + VALUE "FileDescription", "${DESCRIPTION}" + VALUE "FileVersion", "${VERSION_MAJOR}.${VERSION_MINOR}.0.${VERSION_PATCH}" + VALUE "InternalName", "${PRODUCT}" + VALUE "LegalCopyright", "(c) 2012-${YEAR}, Sebastien Jodogne, University Hospital of Liege, Belgium" + VALUE "LegalTrademarks", "Licensing information is available at http://www.orthanc-server.com/" + VALUE "OriginalFilename", "${FILENAME}" + VALUE "ProductName", "${PRODUCT}" + VALUE "ProductVersion", "${VERSION_MAJOR}.${VERSION_MINOR}" + END + END + + BLOCK "VarFileInfo" + BEGIN + VALUE "Translation", 0x409, 1252 // U.S. English + END + END
--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/Resources/SyncOrthancFolder.py Fri Mar 23 11:04:03 2018 +0100 @@ -0,0 +1,216 @@ +#!/usr/bin/python + +# +# This maintenance script updates the content of the "Orthanc" folder +# to match the latest version of the Orthanc source code. +# + +import multiprocessing +import os +import stat +import sys +import urllib2 + +TARGET = os.path.join(os.path.dirname(__file__), 'Orthanc') +BRANCH = 'default' +REPOSITORY = 'https://bitbucket.org/sjodogne/orthanc/raw' + +FILES = [ + 'Core/Cache/ICachePageProvider.h', + 'Core/Cache/LeastRecentlyUsedIndex.h', + 'Core/Cache/MemoryCache.cpp', + 'Core/Cache/MemoryCache.h', + 'Core/Cache/SharedArchive.cpp', + 'Core/Cache/SharedArchive.h', + 'Core/ChunkedBuffer.cpp', + 'Core/ChunkedBuffer.h', + 'Core/Compression/DeflateBaseCompressor.cpp', + 'Core/Compression/DeflateBaseCompressor.h', + 'Core/Compression/GzipCompressor.cpp', + 'Core/Compression/GzipCompressor.h', + 'Core/Compression/HierarchicalZipWriter.cpp', + 'Core/Compression/HierarchicalZipWriter.h', + 'Core/Compression/IBufferCompressor.h', + 'Core/Compression/ZipWriter.cpp', + 'Core/Compression/ZipWriter.h', + 'Core/Compression/ZlibCompressor.cpp', + 'Core/Compression/ZlibCompressor.h', + 'Core/DicomFormat/DicomArray.cpp', + 'Core/DicomFormat/DicomArray.h', + 'Core/DicomFormat/DicomElement.h', + 'Core/DicomFormat/DicomImageInformation.cpp', + 'Core/DicomFormat/DicomImageInformation.h', + 'Core/DicomFormat/DicomInstanceHasher.cpp', + 'Core/DicomFormat/DicomInstanceHasher.h', + 'Core/DicomFormat/DicomIntegerPixelAccessor.cpp', + 'Core/DicomFormat/DicomIntegerPixelAccessor.h', + 'Core/DicomFormat/DicomMap.cpp', + 'Core/DicomFormat/DicomMap.h', + 'Core/DicomFormat/DicomTag.cpp', + 'Core/DicomFormat/DicomTag.h', + 'Core/DicomFormat/DicomValue.cpp', + 'Core/DicomFormat/DicomValue.h', + 'Core/Endianness.h', + 'Core/Enumerations.cpp', + 'Core/Enumerations.h', + 'Core/FileStorage/FileInfo.h', + 'Core/FileStorage/FilesystemStorage.cpp', + 'Core/FileStorage/FilesystemStorage.h', + 'Core/FileStorage/IStorageArea.h', + 'Core/FileStorage/StorageAccessor.cpp', + 'Core/FileStorage/StorageAccessor.h', + 'Core/HttpClient.cpp', + 'Core/HttpClient.h', + 'Core/ICommand.h', + 'Core/IDynamicObject.h', + 'Core/Images/Font.cpp', + 'Core/Images/Font.h', + 'Core/Images/FontRegistry.cpp', + 'Core/Images/FontRegistry.h', + 'Core/Images/IImageWriter.cpp', + 'Core/Images/IImageWriter.h', + 'Core/Images/Image.cpp', + 'Core/Images/Image.h', + 'Core/Images/ImageAccessor.cpp', + 'Core/Images/ImageAccessor.h', + 'Core/Images/ImageBuffer.cpp', + 'Core/Images/ImageBuffer.h', + 'Core/Images/ImageProcessing.cpp', + 'Core/Images/ImageProcessing.h', + 'Core/Images/ImageTraits.h', + 'Core/Images/JpegErrorManager.cpp', + 'Core/Images/JpegErrorManager.h', + 'Core/Images/JpegReader.cpp', + 'Core/Images/JpegReader.h', + 'Core/Images/JpegWriter.cpp', + 'Core/Images/JpegWriter.h', + 'Core/Images/PixelTraits.h', + 'Core/Images/PngReader.cpp', + 'Core/Images/PngReader.h', + 'Core/Images/PngWriter.cpp', + 'Core/Images/PngWriter.h', + 'Core/Logging.cpp', + 'Core/Logging.h', + 'Core/MultiThreading/BagOfTasks.h', + 'Core/MultiThreading/BagOfTasksProcessor.cpp', + 'Core/MultiThreading/BagOfTasksProcessor.h', + 'Core/MultiThreading/ILockable.h', + 'Core/MultiThreading/IRunnableBySteps.h', + 'Core/MultiThreading/Mutex.cpp', + 'Core/MultiThreading/Mutex.h', + 'Core/MultiThreading/ReaderWriterLock.cpp', + 'Core/MultiThreading/ReaderWriterLock.h', + 'Core/MultiThreading/RunnableWorkersPool.cpp', + 'Core/MultiThreading/RunnableWorkersPool.h', + 'Core/MultiThreading/Semaphore.cpp', + 'Core/MultiThreading/Semaphore.h', + 'Core/MultiThreading/SharedMessageQueue.cpp', + 'Core/MultiThreading/SharedMessageQueue.h', + 'Core/OrthancException.h', + 'Core/PrecompiledHeaders.cpp', + 'Core/PrecompiledHeaders.h', + 'Core/SharedLibrary.cpp', + 'Core/SharedLibrary.h', + 'Core/SystemToolbox.cpp', + 'Core/SystemToolbox.h', + 'Core/TemporaryFile.cpp', + 'Core/TemporaryFile.h', + 'Core/Toolbox.cpp', + 'Core/Toolbox.h', + 'Core/WebServiceParameters.cpp', + 'Core/WebServiceParameters.h', + 'NEWS', + 'Plugins/Samples/Common/DicomDatasetReader.cpp', + 'Plugins/Samples/Common/DicomDatasetReader.h', + 'Plugins/Samples/Common/DicomPath.cpp', + 'Plugins/Samples/Common/DicomPath.h', + 'Plugins/Samples/Common/DicomTag.h', + 'Plugins/Samples/Common/FullOrthancDataset.cpp', + 'Plugins/Samples/Common/FullOrthancDataset.h', + 'Plugins/Samples/Common/IDicomDataset.h', + 'Plugins/Samples/Common/IOrthancConnection.cpp', + 'Plugins/Samples/Common/IOrthancConnection.h', + 'Plugins/Samples/Common/OrthancHttpConnection.cpp', + 'Plugins/Samples/Common/OrthancHttpConnection.h', + 'Plugins/Samples/Common/OrthancPluginException.h', + 'Resources/CMake/AutoGeneratedCode.cmake', + 'Resources/CMake/BoostConfiguration.cmake', + 'Resources/CMake/Compiler.cmake', + 'Resources/CMake/DownloadPackage.cmake', + 'Resources/CMake/GoogleTestConfiguration.cmake', + 'Resources/CMake/JsonCppConfiguration.cmake', + 'Resources/CMake/LibCurlConfiguration.cmake', + 'Resources/CMake/LibJpegConfiguration.cmake', + 'Resources/CMake/LibPngConfiguration.cmake', + 'Resources/CMake/OpenSslConfiguration.cmake', + 'Resources/CMake/OrthancFrameworkConfiguration.cmake', + 'Resources/CMake/OrthancFrameworkParameters.cmake', + 'Resources/CMake/UuidConfiguration.cmake', + 'Resources/CMake/ZlibConfiguration.cmake', + 'Resources/EmbedResources.py', + 'Resources/LinuxStandardBaseToolchain.cmake', + 'Resources/MinGW-W64-Toolchain32.cmake', + 'Resources/MinGW-W64-Toolchain64.cmake', + 'Resources/MinGWToolchain.cmake', + 'Resources/Patches/boost-1.65.1-linux-standard-base.patch', + 'Resources/ThirdParty/VisualStudio/stdint.h', + 'Resources/ThirdParty/base64/base64.cpp', + 'Resources/ThirdParty/base64/base64.h', + 'Resources/ThirdParty/md5/md5.c', + 'Resources/ThirdParty/md5/md5.h', + 'Resources/ThirdParty/minizip/NOTES', + 'Resources/ThirdParty/minizip/crypt.h', + 'Resources/ThirdParty/minizip/ioapi.c', + 'Resources/ThirdParty/minizip/ioapi.h', + 'Resources/ThirdParty/minizip/zip.c', + 'Resources/ThirdParty/minizip/zip.h', + 'Resources/ThirdParty/patch/NOTES.txt', + 'Resources/ThirdParty/patch/msys-1.0.dll', + 'Resources/ThirdParty/patch/patch.exe', + 'Resources/ThirdParty/patch/patch.exe.manifest', + 'Resources/WindowsResources.py', + 'Resources/WindowsResources.rc', +] + +EXE = [ + 'Resources/EmbedResources.py', + 'Resources/WindowsResources.py', +] + + +def Download(x): + branch = x[0] + source = x[1] + target = os.path.join(TARGET, x[2]) + print target + + try: + os.makedirs(os.path.dirname(target)) + except: + pass + + url = '%s/%s/%s' % (REPOSITORY, branch, source) + + try: + with open(target, 'w') as f: + f.write(urllib2.urlopen(url).read()) + except: + sys.stderr.write('Cannot download: %s\n' % url) + raise + + +commands = [] + +for f in FILES: + commands.append([ BRANCH, f, f ]) + +pool = multiprocessing.Pool(10) # simultaneous downloads + +# https://stackoverflow.com/a/1408476/881731 +pool.map_async(Download, commands).get(timeout = 20) + + +for exe in EXE: + path = os.path.join(TARGET, exe) + st = os.stat(path) + os.chmod(path, st.st_mode | stat.S_IEXEC)