diff Resources/Orthanc/Core/DicomFormat/DicomTag.cpp @ 200:03afbee0cc7b

integration of Orthanc core into Stone
author Sebastien Jodogne <s.jodogne@gmail.com>
date Fri, 23 Mar 2018 11:04:03 +0100
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/Resources/Orthanc/Core/DicomFormat/DicomTag.cpp	Fri Mar 23 11:04:03 2018 +0100
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+/**
+ * Orthanc - A Lightweight, RESTful DICOM Store
+ * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
+ * Department, University Hospital of Liege, Belgium
+ * Copyright (C) 2017-2018 Osimis S.A., Belgium
+ *
+ * This program is free software: you can redistribute it and/or
+ * modify it under the terms of the GNU General Public License as
+ * published by the Free Software Foundation, either version 3 of the
+ * License, or (at your option) any later version.
+ *
+ * In addition, as a special exception, the copyright holders of this
+ * program give permission to link the code of its release with the
+ * OpenSSL project's "OpenSSL" library (or with modified versions of it
+ * that use the same license as the "OpenSSL" library), and distribute
+ * the linked executables. You must obey the GNU General Public License
+ * in all respects for all of the code used other than "OpenSSL". If you
+ * modify file(s) with this exception, you may extend this exception to
+ * your version of the file(s), but you are not obligated to do so. If
+ * you do not wish to do so, delete this exception statement from your
+ * version. If you delete this exception statement from all source files
+ * in the program, then also delete it here.
+ * 
+ * This program is distributed in the hope that it will be useful, but
+ * WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * General Public License for more details.
+ *
+ * You should have received a copy of the GNU General Public License
+ * along with this program. If not, see <http://www.gnu.org/licenses/>.
+ **/
+
+
+#include "../PrecompiledHeaders.h"
+#include "DicomTag.h"
+
+#include "../OrthancException.h"
+
+#include <iostream>
+#include <iomanip>
+#include <stdio.h>
+
+namespace Orthanc
+{
+  bool DicomTag::operator< (const DicomTag& other) const
+  {
+    if (group_ < other.group_)
+      return true;
+
+    if (group_ > other.group_)
+      return false;
+
+    return element_ < other.element_;
+  }
+
+
+  std::ostream& operator<< (std::ostream& o, const DicomTag& tag)
+  {
+    using namespace std;
+    ios_base::fmtflags state = o.flags();
+    o.flags(ios::right | ios::hex);
+    o << "(" << setfill('0') << setw(4) << tag.GetGroup()
+      << "," << setw(4) << tag.GetElement() << ")";
+    o.flags(state);
+    return o;
+  }
+
+
+  std::string DicomTag::Format() const
+  {
+    char b[16];
+    sprintf(b, "%04x,%04x", group_, element_);
+    return std::string(b);
+  }
+
+
+  const char* DicomTag::GetMainTagsName() const
+  {
+    if (*this == DICOM_TAG_ACCESSION_NUMBER)
+      return "AccessionNumber";
+
+    if (*this == DICOM_TAG_SOP_INSTANCE_UID)
+      return "SOPInstanceUID";
+
+    if (*this == DICOM_TAG_PATIENT_ID)
+      return "PatientID";
+
+    if (*this == DICOM_TAG_SERIES_INSTANCE_UID)
+      return "SeriesInstanceUID";
+
+    if (*this == DICOM_TAG_STUDY_INSTANCE_UID)
+      return "StudyInstanceUID"; 
+
+    if (*this == DICOM_TAG_PIXEL_DATA)
+      return "PixelData";
+
+    if (*this == DICOM_TAG_IMAGE_INDEX)
+      return "ImageIndex";
+
+    if (*this == DICOM_TAG_INSTANCE_NUMBER)
+      return "InstanceNumber";
+
+    if (*this == DICOM_TAG_NUMBER_OF_SLICES)
+      return "NumberOfSlices";
+
+    if (*this == DICOM_TAG_NUMBER_OF_FRAMES)
+      return "NumberOfFrames";
+
+    if (*this == DICOM_TAG_CARDIAC_NUMBER_OF_IMAGES)
+      return "CardiacNumberOfImages";
+
+    if (*this == DICOM_TAG_IMAGES_IN_ACQUISITION)
+      return "ImagesInAcquisition";
+
+    if (*this == DICOM_TAG_PATIENT_NAME)
+      return "PatientName";
+
+    if (*this == DICOM_TAG_IMAGE_POSITION_PATIENT)
+      return "ImagePositionPatient";
+
+    if (*this == DICOM_TAG_IMAGE_ORIENTATION_PATIENT)
+      return "ImageOrientationPatient";
+
+    return "";
+  }
+
+
+  void DicomTag::AddTagsForModule(std::set<DicomTag>& target,
+                                  DicomModule module)
+  {
+    // REFERENCE: 11_03pu.pdf, DICOM PS 3.3 2011 - Information Object Definitions
+
+    switch (module)
+    {
+      case DicomModule_Patient:
+        // This is Table C.7-1 "Patient Module Attributes" (p. 373)
+        target.insert(DicomTag(0x0010, 0x0010));   // Patient's name
+        target.insert(DicomTag(0x0010, 0x0020));   // Patient ID
+        target.insert(DicomTag(0x0010, 0x0030));   // Patient's birth date
+        target.insert(DicomTag(0x0010, 0x0040));   // Patient's sex
+        target.insert(DicomTag(0x0008, 0x1120));   // Referenced patient sequence
+        target.insert(DicomTag(0x0010, 0x0032));   // Patient's birth time
+        target.insert(DicomTag(0x0010, 0x1000));   // Other patient IDs
+        target.insert(DicomTag(0x0010, 0x1002));   // Other patient IDs sequence
+        target.insert(DicomTag(0x0010, 0x1001));   // Other patient names
+        target.insert(DicomTag(0x0010, 0x2160));   // Ethnic group
+        target.insert(DicomTag(0x0010, 0x4000));   // Patient comments
+        target.insert(DicomTag(0x0010, 0x2201));   // Patient species description
+        target.insert(DicomTag(0x0010, 0x2202));   // Patient species code sequence
+        target.insert(DicomTag(0x0010, 0x2292));   // Patient breed description
+        target.insert(DicomTag(0x0010, 0x2293));   // Patient breed code sequence
+        target.insert(DicomTag(0x0010, 0x2294));   // Breed registration sequence
+        target.insert(DicomTag(0x0010, 0x2297));   // Responsible person
+        target.insert(DicomTag(0x0010, 0x2298));   // Responsible person role
+        target.insert(DicomTag(0x0010, 0x2299));   // Responsible organization
+        target.insert(DicomTag(0x0012, 0x0062));   // Patient identity removed
+        target.insert(DicomTag(0x0012, 0x0063));   // De-identification method
+        target.insert(DicomTag(0x0012, 0x0064));   // De-identification method code sequence
+
+        // Table 10-18 ISSUER OF PATIENT ID MACRO (p. 112)
+        target.insert(DicomTag(0x0010, 0x0021));   // Issuer of Patient ID
+        target.insert(DicomTag(0x0010, 0x0024));   // Issuer of Patient ID qualifiers sequence
+        break;
+
+      case DicomModule_Study:
+        // This is Table C.7-3 "General Study Module Attributes" (p. 378)
+        target.insert(DicomTag(0x0020, 0x000d));   // Study instance UID
+        target.insert(DicomTag(0x0008, 0x0020));   // Study date
+        target.insert(DicomTag(0x0008, 0x0030));   // Study time
+        target.insert(DicomTag(0x0008, 0x0090));   // Referring physician's name
+        target.insert(DicomTag(0x0008, 0x0096));   // Referring physician identification sequence
+        target.insert(DicomTag(0x0020, 0x0010));   // Study ID
+        target.insert(DicomTag(0x0008, 0x0050));   // Accession number
+        target.insert(DicomTag(0x0008, 0x0051));   // Issuer of accession number sequence
+        target.insert(DicomTag(0x0008, 0x1030));   // Study description
+        target.insert(DicomTag(0x0008, 0x1048));   // Physician(s) of record
+        target.insert(DicomTag(0x0008, 0x1049));   // Physician(s) of record identification sequence
+        target.insert(DicomTag(0x0008, 0x1060));   // Name of physician(s) reading study
+        target.insert(DicomTag(0x0008, 0x1062));   // Physician(s) reading study identification sequence
+        target.insert(DicomTag(0x0032, 0x1034));   // Requesting service code sequence
+        target.insert(DicomTag(0x0008, 0x1110));   // Referenced study sequence
+        target.insert(DicomTag(0x0008, 0x1032));   // Procedure code sequence
+        target.insert(DicomTag(0x0040, 0x1012));   // Reason for performed procedure code sequence
+        break;
+
+      case DicomModule_Series:
+        // This is Table C.7-5 "General Series Module Attributes" (p. 385)
+        target.insert(DicomTag(0x0008, 0x0060));   // Modality 
+        target.insert(DicomTag(0x0020, 0x000e));   // Series Instance UID 
+        target.insert(DicomTag(0x0020, 0x0011));   // Series Number 
+        target.insert(DicomTag(0x0020, 0x0060));   // Laterality 
+        target.insert(DicomTag(0x0008, 0x0021));   // Series Date 
+        target.insert(DicomTag(0x0008, 0x0031));   // Series Time 
+        target.insert(DicomTag(0x0008, 0x1050));   // Performing Physicians’ Name 
+        target.insert(DicomTag(0x0008, 0x1052));   // Performing Physician Identification Sequence 
+        target.insert(DicomTag(0x0018, 0x1030));   // Protocol Name
+        target.insert(DicomTag(0x0008, 0x103e));   // Series Description 
+        target.insert(DicomTag(0x0008, 0x103f));   // Series Description Code Sequence 
+        target.insert(DicomTag(0x0008, 0x1070));   // Operators' Name 
+        target.insert(DicomTag(0x0008, 0x1072));   // Operator Identification Sequence 
+        target.insert(DicomTag(0x0008, 0x1111));   // Referenced Performed Procedure Step Sequence
+        target.insert(DicomTag(0x0008, 0x1250));   // Related Series Sequence
+        target.insert(DicomTag(0x0018, 0x0015));   // Body Part Examined
+        target.insert(DicomTag(0x0018, 0x5100));   // Patient Position
+        target.insert(DicomTag(0x0028, 0x0108));   // Smallest Pixel Value in Series 
+        target.insert(DicomTag(0x0029, 0x0109));   // Largest Pixel Value in Series 
+        target.insert(DicomTag(0x0040, 0x0275));   // Request Attributes Sequence 
+        target.insert(DicomTag(0x0010, 0x2210));   // Anatomical Orientation Type
+
+        // Table 10-16 PERFORMED PROCEDURE STEP SUMMARY MACRO ATTRIBUTES
+        target.insert(DicomTag(0x0040, 0x0253));   // Performed Procedure Step ID 
+        target.insert(DicomTag(0x0040, 0x0244));   // Performed Procedure Step Start Date 
+        target.insert(DicomTag(0x0040, 0x0245));   // Performed Procedure Step Start Time 
+        target.insert(DicomTag(0x0040, 0x0254));   // Performed Procedure Step Description 
+        target.insert(DicomTag(0x0040, 0x0260));   // Performed Protocol Code Sequence 
+        target.insert(DicomTag(0x0040, 0x0280));   // Comments on the Performed Procedure Step
+        break;
+
+      case DicomModule_Instance:
+        // This is Table C.12-1 "SOP Common Module Attributes" (p. 1207)
+        target.insert(DicomTag(0x0008, 0x0016));   // SOP Class UID
+        target.insert(DicomTag(0x0008, 0x0018));   // SOP Instance UID 
+        target.insert(DicomTag(0x0008, 0x0005));   // Specific Character Set 
+        target.insert(DicomTag(0x0008, 0x0012));   // Instance Creation Date 
+        target.insert(DicomTag(0x0008, 0x0013));   // Instance Creation Time 
+        target.insert(DicomTag(0x0008, 0x0014));   // Instance Creator UID 
+        target.insert(DicomTag(0x0008, 0x001a));   // Related General SOP Class UID 
+        target.insert(DicomTag(0x0008, 0x001b));   // Original Specialized SOP Class UID 
+        target.insert(DicomTag(0x0008, 0x0110));   // Coding Scheme Identification Sequence 
+        target.insert(DicomTag(0x0008, 0x0201));   // Timezone Offset From UTC 
+        target.insert(DicomTag(0x0018, 0xa001));   // Contributing Equipment Sequence
+        target.insert(DicomTag(0x0020, 0x0013));   // Instance Number 
+        target.insert(DicomTag(0x0100, 0x0410));   // SOP Instance Status 
+        target.insert(DicomTag(0x0100, 0x0420));   // SOP Authorization DateTime 
+        target.insert(DicomTag(0x0100, 0x0424));   // SOP Authorization Comment 
+        target.insert(DicomTag(0x0100, 0x0426));   // Authorization Equipment Certification Number
+        target.insert(DicomTag(0x0400, 0x0500));   // Encrypted Attributes Sequence
+        target.insert(DicomTag(0x0400, 0x0561));   // Original Attributes Sequence 
+        target.insert(DicomTag(0x0040, 0xa390));   // HL7 Structured Document Reference Sequence
+        target.insert(DicomTag(0x0028, 0x0303));   // Longitudinal Temporal Information Modified 
+
+        // Table C.12-6 "DIGITAL SIGNATURES MACRO ATTRIBUTES" (p. 1216)
+        target.insert(DicomTag(0x4ffe, 0x0001));   // MAC Parameters sequence
+        target.insert(DicomTag(0xfffa, 0xfffa));   // Digital signatures sequence
+        break;
+
+        // TODO IMAGE MODULE?
+
+      default:
+        throw OrthancException(ErrorCode_ParameterOutOfRange);
+    }
+  }
+}