annotate Framework/Toolbox/SlicesSorter.h @ 667:e9339f2b5de7

refactoring of VolumeImage
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 15 May 2019 17:30:58 +0200
parents 970949ff868a
children dbc1d8bfc68a
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2 * Stone of Orthanc
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
4 * Department, University Hospital of Liege, Belgium
439
b70e9be013e4 preparing for 2019
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 135
diff changeset
5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
6 *
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 * This program is free software: you can redistribute it and/or
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
8 * modify it under the terms of the GNU Affero General Public License
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 * as published by the Free Software Foundation, either version 3 of
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 * the License, or (at your option) any later version.
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
11 *
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
12 * This program is distributed in the hope that it will be useful, but
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 * WITHOUT ANY WARRANTY; without even the implied warranty of
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
15 * Affero General Public License for more details.
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
16 *
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
17 * You should have received a copy of the GNU Affero General Public License
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
19 **/
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
20
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22 #pragma once
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23
647
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
24 #include "CoordinateSystem3D.h"
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
25
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
26 #include <Core/IDynamicObject.h>
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
27
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 namespace OrthancStone
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29 {
647
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
30 // TODO - Rename this as "PlanesSorter"
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31 class SlicesSorter : public boost::noncopyable
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
33 private:
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34 class SliceWithDepth;
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35 struct Comparator;
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
37 typedef std::vector<SliceWithDepth*> Slices;
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
38
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
39 Slices slices_;
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
40 bool hasNormal_;
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
41
647
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
42 const SliceWithDepth& GetSlice(size_t i) const;
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
43
648
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 647
diff changeset
44 void SetNormal(const Vector& normal);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 647
diff changeset
45
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 647
diff changeset
46 void SortInternal();
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 647
diff changeset
47
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 647
diff changeset
48 void FilterNormal(const Vector& normal);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 647
diff changeset
49
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 647
diff changeset
50 bool SelectNormal(Vector& normal) const;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 647
diff changeset
51
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
52 public:
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
53 SlicesSorter() : hasNormal_(false)
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
54 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
55 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
56
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
57 ~SlicesSorter();
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
58
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
59 void Reserve(size_t count)
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
60 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
61 slices_.reserve(count);
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
62 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
63
647
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
64 void AddSlice(const CoordinateSystem3D& plane)
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
65 {
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
66 AddSlice(plane, NULL);
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
67 }
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
68
647
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
69 void AddSlice(const CoordinateSystem3D& plane,
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
70 Orthanc::IDynamicObject* payload); // Takes ownership
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
71
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
72 size_t GetSlicesCount() const
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
73 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
74 return slices_.size();
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
75 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
76
647
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
77 const CoordinateSystem3D& GetSliceGeometry(size_t i) const;
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
78
647
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
79 bool HasSlicePayload(size_t i) const;
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
80
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
81 const Orthanc::IDynamicObject& GetSlicePayload(size_t i) const;
648
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 647
diff changeset
82
661
970949ff868a fix warning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 648
diff changeset
83 // WARNING - Apply the sorting algorithm can reduce the number of
970949ff868a fix warning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 648
diff changeset
84 // slices. This is notably the case if all the slices are not
970949ff868a fix warning
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 648
diff changeset
85 // parallel to the reference normal that will be selected.
648
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 647
diff changeset
86 bool Sort();
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
87
647
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
88 bool LookupClosestSlice(size_t& index,
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
89 double& distance,
6af3099ed8da uncoupling OrthancStone::SlicesSorter from OrthancStone::Slice
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 439
diff changeset
90 const CoordinateSystem3D& slice) const;
667
e9339f2b5de7 refactoring of VolumeImage
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 661
diff changeset
91
e9339f2b5de7 refactoring of VolumeImage
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 661
diff changeset
92 // WARNING - The slices must have been sorted before calling this method
e9339f2b5de7 refactoring of VolumeImage
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 661
diff changeset
93 double ComputeSpacingBetweenSlices() const;
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
94 };
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
95 }