Mercurial > hg > orthanc-stone
annotate Framework/Toolbox/DicomStructureSet.h @ 122:e3433dabfb8d wasm
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author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Fri, 06 Oct 2017 17:25:08 +0200 |
parents | 2eca030792aa |
children | 44fc253d4876 |
rev | line source |
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0 | 1 /** |
2 * Stone of Orthanc | |
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
4 * Department, University Hospital of Liege, Belgium | |
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5 * Copyright (C) 2017 Osimis, Belgium |
0 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
47 | 8 * modify it under the terms of the GNU Affero General Public License |
9 * as published by the Free Software Foundation, either version 3 of | |
10 * the License, or (at your option) any later version. | |
0 | 11 * |
12 * This program is distributed in the hope that it will be useful, but | |
13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
47 | 14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
15 * Affero General Public License for more details. | |
16 * | |
17 * You should have received a copy of the GNU Affero General Public License | |
0 | 18 * along with this program. If not, see <http://www.gnu.org/licenses/>. |
19 **/ | |
20 | |
21 | |
22 #pragma once | |
23 | |
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24 #include "CoordinateSystem3D.h" |
0 | 25 #include "../Viewport/CairoContext.h" |
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26 |
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27 #include <Plugins/Samples/Common/FullOrthancDataset.h> |
0 | 28 |
29 #include <list> | |
30 | |
31 namespace OrthancStone | |
32 { | |
33 class DicomStructureSet : public boost::noncopyable | |
34 { | |
35 private: | |
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36 struct ReferencedSlice |
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37 { |
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38 std::string seriesInstanceUid_; |
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39 CoordinateSystem3D geometry_; |
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40 double thickness_; |
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41 |
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42 ReferencedSlice() |
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43 { |
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44 } |
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45 |
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46 ReferencedSlice(const std::string& seriesInstanceUid, |
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47 const CoordinateSystem3D& geometry, |
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48 double thickness) : |
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49 seriesInstanceUid_(seriesInstanceUid), |
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50 geometry_(geometry), |
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51 thickness_(thickness) |
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52 { |
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53 } |
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54 }; |
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55 |
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56 typedef std::map<std::string, ReferencedSlice> ReferencedSlices; |
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57 |
0 | 58 typedef std::list<Vector> Points; |
59 | |
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60 class Polygon |
0 | 61 { |
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62 private: |
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63 std::string sopInstanceUid_; |
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64 bool hasSlice_; |
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65 Vector normal_; |
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66 double projectionAlongNormal_; |
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67 double sliceThickness_; // In millimeters |
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68 Points points_; |
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69 |
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70 void CheckPoint(const Vector& v); |
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71 |
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72 public: |
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73 Polygon(const std::string& sopInstanceUid) : |
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74 sopInstanceUid_(sopInstanceUid), |
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75 hasSlice_(false) |
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76 { |
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77 } |
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78 |
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79 void AddPoint(const Vector& v); |
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80 |
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81 bool UpdateReferencedSlice(const ReferencedSlices& slices); |
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82 |
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83 bool IsOnSlice(const CoordinateSystem3D& geometry) const; |
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84 |
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85 const std::string& GetSopInstanceUid() const |
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86 { |
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87 return sopInstanceUid_; |
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88 } |
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89 |
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90 const Points& GetPoints() const |
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91 { |
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92 return points_; |
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93 } |
0 | 94 }; |
95 | |
96 typedef std::list<Polygon> Polygons; | |
97 | |
98 struct Structure | |
99 { | |
100 std::string name_; | |
101 std::string interpretation_; | |
102 Polygons polygons_; | |
103 uint8_t red_; | |
104 uint8_t green_; | |
105 uint8_t blue_; | |
106 }; | |
107 | |
108 typedef std::vector<Structure> Structures; | |
109 | |
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110 Structures structures_; |
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111 ReferencedSlices referencedSlices_; |
0 | 112 |
113 const Structure& GetStructure(size_t index) const; | |
114 | |
115 public: | |
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116 DicomStructureSet(const OrthancPlugins::FullOrthancDataset& instance); |
0 | 117 |
118 size_t GetStructureCount() const | |
119 { | |
120 return structures_.size(); | |
121 } | |
122 | |
123 Vector GetStructureCenter(size_t index) const; | |
124 | |
125 const std::string& GetStructureName(size_t index) const; | |
126 | |
127 const std::string& GetStructureInterpretation(size_t index) const; | |
128 | |
129 void GetStructureColor(uint8_t& red, | |
130 uint8_t& green, | |
131 uint8_t& blue, | |
132 size_t index) const; | |
133 | |
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134 void GetReferencedInstances(std::set<std::string>& instances); |
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135 |
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136 void AddReferencedSlice(const std::string& sopInstanceUid, |
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137 const std::string& seriesInstanceUid, |
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138 const CoordinateSystem3D& geometry, |
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139 double thickness); |
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140 |
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141 void AddReferencedSlice(const Orthanc::DicomMap& dataset); |
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142 |
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143 void CheckReferencedSlices(); |
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145 void Render(CairoContext& context, | |
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146 const CoordinateSystem3D& slice); |
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147 |
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148 Vector GetNormal() const; |
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149 |
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150 static DicomStructureSet* SynchronousLoad(OrthancPlugins::IOrthancConnection& orthanc, |
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151 const std::string& instanceId); |
0 | 152 }; |
153 } |