annotate Framework/Toolbox/DicomStructureSet.h @ 110:53025eecbc95 wasm

renamed SliceGeometry as CoordinateSystem3D
author Sebastien Jodogne <s.jodogne@gmail.com>
date Wed, 14 Jun 2017 15:50:38 +0200
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1 /**
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2 * Stone of Orthanc
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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7207a407bcd8 shared copyright with osimis
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5 * Copyright (C) 2017 Osimis, Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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28956ed68280 agpl license
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8 * modify it under the terms of the GNU Affero General Public License
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9 * as published by the Free Software Foundation, either version 3 of
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10 * the License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * Affero General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU Affero General Public License
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18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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19 **/
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22 #pragma once
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24 #include "CoordinateSystem3D.h"
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25 #include "../Viewport/CairoContext.h"
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26 #include "../../Resources/Orthanc/Plugins/Samples/Common/IOrthancConnection.h"
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28 #include <list>
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30 namespace OrthancStone
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31 {
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32 class DicomStructureSet : public boost::noncopyable
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33 {
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34 private:
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35 typedef std::list<Vector> Points;
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37 struct Polygon
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38 {
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39 double projectionAlongNormal_;
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40 double sliceThickness_; // In millimeters
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41 Points points_;
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42 };
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44 typedef std::list<Polygon> Polygons;
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46 struct Structure
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47 {
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48 std::string name_;
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49 std::string interpretation_;
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50 Polygons polygons_;
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51 uint8_t red_;
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52 uint8_t green_;
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53 uint8_t blue_;
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54 };
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56 typedef std::vector<Structure> Structures;
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58 Structures structures_;
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59 std::string parentSeriesId_;
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60 Vector normal_;
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62 CoordinateSystem3D ExtractSliceGeometry(double& sliceThickness,
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63 OrthancPlugins::IOrthancConnection& orthanc,
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64 const OrthancPlugins::IDicomDataset& tags,
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65 size_t contourIndex,
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66 size_t sliceIndex);
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68 const Structure& GetStructure(size_t index) const;
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69
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70 bool IsPolygonOnSlice(const Polygon& polygon,
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71 const CoordinateSystem3D& geometry) const;
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74 public:
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75 DicomStructureSet(OrthancPlugins::IOrthancConnection& orthanc,
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76 const std::string& instanceId);
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78 size_t GetStructureCount() const
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79 {
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80 return structures_.size();
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81 }
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82
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83 Vector GetStructureCenter(size_t index) const;
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84
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85 const std::string& GetStructureName(size_t index) const;
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86
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87 const std::string& GetStructureInterpretation(size_t index) const;
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88
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89 void GetStructureColor(uint8_t& red,
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90 uint8_t& green,
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91 uint8_t& blue,
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92 size_t index) const;
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93
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94 const Vector& GetNormal() const
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95 {
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96 return normal_;
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97 }
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98
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99 void Render(CairoContext& context,
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100 const CoordinateSystem3D& slice) const;
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101 };
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102 }