Mercurial > hg > orthanc-stone

annotate Framework/Radiography/RadiographyScene.cpp @ 1373:e0cdf8688d56

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wip: from RadiographyScene to Scene2D
author Alain Mazy <alain@mazy.be>
date Wed, 08 Apr 2020 14:14:51 +0200
parents a72c2c9af49a
children 6ea4062c1a0d
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1 /**
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2 * Stone of Orthanc
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU Affero General Public License
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9 * as published by the Free Software Foundation, either version 3 of
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10 * the License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * Affero General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU Affero General Public License
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18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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19 **/
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20
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21
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22 #include "RadiographyScene.h"
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23
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24 #include "RadiographyAlphaLayer.h"
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25 #include "RadiographyDicomLayer.h"
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26 #include "RadiographyTextLayer.h"
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27 #include "RadiographyMaskLayer.h"
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28 #include "../Deprecated/Toolbox/DicomFrameConverter.h"
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29 #include "../Scene2D/CairoCompositor.h"
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30 #include "../Scene2D/FloatTextureSceneLayer.h"
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31 #include "../Scene2D/TextSceneLayer.h"
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32
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33 #include <Core/Images/Image.h>
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34 #include <Core/Images/ImageProcessing.h>
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35 #include <Core/Images/PamReader.h>
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36 #include <Core/Images/PamWriter.h>
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37 #include <Core/Images/PngWriter.h>
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38 #include <Core/OrthancException.h>
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39 #include <Core/Toolbox.h>
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40 #include <Plugins/Samples/Common/DicomDatasetReader.h>
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41 #include <Plugins/Samples/Common/FullOrthancDataset.h>
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42
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43 #include <boost/math/special_functions/round.hpp>
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44
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45
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46 namespace OrthancStone
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47 {
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48 RadiographyScene::LayerAccessor::LayerAccessor(RadiographyScene& scene,
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49 size_t index) :
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50 scene_(scene),
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51 index_(index)
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52 {
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53 Layers::iterator layer = scene.layers_.find(index);
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54 if (layer == scene.layers_.end())
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55 {
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56 layer_ = NULL;
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57 }
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58 else
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59 {
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60 assert(layer->second != NULL);
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61 layer_ = layer->second;
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62 }
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63 }
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64
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65
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66 RadiographyScene::LayerAccessor::LayerAccessor(RadiographyScene& scene,
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67 double x,
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68 double y) :
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69 scene_(scene),
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70 index_(0) // Dummy initialization
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71 {
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72 if (scene.LookupLayer(index_, x, y))
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73 {
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74 Layers::iterator layer = scene.layers_.find(index_);
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75
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76 if (layer == scene.layers_.end())
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77 {
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78 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
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79 }
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80 else
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81 {
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82 assert(layer->second != NULL);
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83 layer_ = layer->second;
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84 }
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85 }
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86 else
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87 {
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88 layer_ = NULL;
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89 }
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90 }
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91
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92
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93 RadiographyScene& RadiographyScene::LayerAccessor::GetScene() const
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94 {
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95 if (IsValid())
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96 {
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97 return scene_;
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98 }
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99 else
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100 {
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101 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
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102 }
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103 }
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104
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105
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106 size_t RadiographyScene::LayerAccessor::GetIndex() const
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107 {
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108 if (IsValid())
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109 {
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110 return index_;
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111 }
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112 else
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113 {
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114 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
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115 }
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116 }
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117
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118
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119 RadiographyLayer& RadiographyScene::LayerAccessor::GetLayer() const
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120 {
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121 if (IsValid())
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122 {
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123 return *layer_;
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124 }
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125 else
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126 {
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127 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
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128 }
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129 }
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130
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131 void RadiographyScene::_RegisterLayer(RadiographyLayer* layer)
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132 {
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133 std::unique_ptr<RadiographyLayer> raii(layer);
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134
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135 // LOG(INFO) << "Registering layer: " << countLayers_;
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136
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137 size_t index = nextLayerIndex_++;
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138 raii->SetIndex(index);
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139 layers_[index] = raii.release();
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140 }
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141
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142 RadiographyLayer& RadiographyScene::RegisterLayer(RadiographyLayer* layer)
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143 {
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144 if (layer == NULL)
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145 {
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146 throw Orthanc::OrthancException(Orthanc::ErrorCode_NullPointer);
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147 }
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148
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149 _RegisterLayer(layer);
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150
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151 BroadcastMessage(GeometryChangedMessage(*this, *layer));
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152 BroadcastMessage(ContentChangedMessage(*this, *layer));
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153 layer->RegisterObserverCallback(new Callable<RadiographyScene, RadiographyLayer::LayerEditedMessage>(*this, &RadiographyScene::OnLayerEdited));
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154
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155 return *layer;
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156 }
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157
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158 size_t RadiographyScene::GetApproximateMemoryUsage() const
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159 {
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160 size_t size = 0;
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161 for (Layers::const_iterator it = layers_.begin(); it != layers_.end(); it++)
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162 {
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163 size += it->second->GetApproximateMemoryUsage();
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164 }
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165 return size;
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166 }
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167
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168 void RadiographyScene::OnLayerEdited(const RadiographyLayer::LayerEditedMessage& message)
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169 {
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42dadae61fa9 renamed IObservable::EmitMessage() as BroadcastMessage()
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170 BroadcastMessage(RadiographyScene::LayerEditedMessage(*this, message.GetOrigin()));
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171 }
408
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172
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173 RadiographyScene::RadiographyScene(MessageBroker& broker) :
408
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174 IObserver(broker),
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175 IObservable(broker),
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176 nextLayerIndex_(0),
408
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177 hasWindowing_(false),
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178 windowingCenter_(0), // Dummy initialization
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179 windowingWidth_(0) // Dummy initialization
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180 {
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181 }
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182
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183
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184 RadiographyScene::~RadiographyScene()
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185 {
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186 for (Layers::iterator it = layers_.begin(); it != layers_.end(); it++)
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187 {
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188 assert(it->second != NULL);
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189 delete it->second;
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190 }
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191 }
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192
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193 RadiographyPhotometricDisplayMode RadiographyScene::GetPreferredPhotomotricDisplayMode() const
432
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194 {
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195 // return the mode of the first layer who "cares" about its display mode (normaly, the one and only layer that is a DicomLayer)
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196 for (Layers::const_iterator it = layers_.begin(); it != layers_.end(); it++)
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197 {
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198 if (it->second->GetPreferredPhotomotricDisplayMode() != RadiographyPhotometricDisplayMode_Default)
432
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199 {
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200 return it->second->GetPreferredPhotomotricDisplayMode();
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201 }
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202 }
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203
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204 return RadiographyPhotometricDisplayMode_Default;
432
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205 }
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206
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207
430
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208 void RadiographyScene::GetLayersIndexes(std::vector<size_t>& output) const
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209 {
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210 for (Layers::const_iterator it = layers_.begin(); it != layers_.end(); it++)
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211 {
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212 output.push_back(it->first);
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213 }
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214 }
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215
425
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diff changeset
216 void RadiographyScene::RemoveLayer(size_t layerIndex)
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217 {
428
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218 LOG(INFO) << "Removing layer: " << layerIndex;
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219
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220 Layers::iterator found = layers_.find(layerIndex);
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221
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222 if (found == layers_.end())
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223 {
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224 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
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225 }
571
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226 else
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227 {
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228 assert(found->second != NULL);
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229 delete found->second;
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230
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231 layers_.erase(found);
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232
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233 LOG(INFO) << "Removing layer, there are now : " << layers_.size() << " layers";
1131
4663f158c748 RadiographyWidget is now notified when a layer is removed from the scene
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234
1272
a989c7d46b9a options to avoid multiple LayerEditedMessage
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diff changeset
235 _OnLayerRemoved();
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236
1131
4663f158c748 RadiographyWidget is now notified when a layer is removed from the scene
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diff changeset
237 BroadcastMessage(RadiographyScene::LayerRemovedMessage(*this, layerIndex));
571
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238 }
425
087237703d63 added layer accessors
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239 }
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240
430
b85f635f1eb5 added serialization for RadiographyScene
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diff changeset
241 const RadiographyLayer& RadiographyScene::GetLayer(size_t layerIndex) const
425
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242 {
571
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diff changeset
243 Layers::const_iterator found = layers_.find(layerIndex);
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diff changeset
244
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diff changeset
245 if (found == layers_.end())
425
087237703d63 added layer accessors
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diff changeset
246 {
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247 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
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248 }
571
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parents: 553
diff changeset
249 else
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parents: 553
diff changeset
250 {
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diff changeset
251 assert(found->second != NULL);
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252 return *found->second;
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253 }
425
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diff changeset
254 }
408
6834c236b36d reorganization
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parents:
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255
1201
ab958fd99b07 RadiographyScene fixes
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parents: 1199
diff changeset
256 RadiographyLayer& RadiographyScene::GetLayer(size_t layerIndex)
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diff changeset
257 {
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diff changeset
258 Layers::const_iterator found = layers_.find(layerIndex);
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diff changeset
259
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diff changeset
260 if (found == layers_.end())
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parents: 1199
diff changeset
261 {
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diff changeset
262 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
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263 }
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diff changeset
264 else
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parents: 1199
diff changeset
265 {
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diff changeset
266 assert(found->second != NULL);
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diff changeset
267 return *found->second;
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diff changeset
268 }
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diff changeset
269 }
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diff changeset
270
408
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parents:
diff changeset
271 bool RadiographyScene::GetWindowing(float& center,
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parents:
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272 float& width) const
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273 {
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parents:
diff changeset
274 if (hasWindowing_)
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parents:
diff changeset
275 {
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diff changeset
276 center = windowingCenter_;
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diff changeset
277 width = windowingWidth_;
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parents:
diff changeset
278 return true;
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parents:
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279 }
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parents:
diff changeset
280 else
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parents:
diff changeset
281 {
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282 return false;
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parents:
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283 }
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parents:
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284 }
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parents:
diff changeset
285
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parents:
diff changeset
286
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287 void RadiographyScene::GetWindowingWithDefault(float& center,
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288 float& width) const
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289 {
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parents:
diff changeset
290 if (!GetWindowing(center, width))
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parents:
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291 {
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292 center = 128;
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293 width = 256;
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parents:
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294 }
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parents:
diff changeset
295 }
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parents:
diff changeset
296
6834c236b36d reorganization
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parents:
diff changeset
297
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diff changeset
298 void RadiographyScene::SetWindowing(float center,
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diff changeset
299 float width)
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parents:
diff changeset
300 {
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parents:
diff changeset
301 hasWindowing_ = true;
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diff changeset
302 windowingCenter_ = center;
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diff changeset
303 windowingWidth_ = width;
503
77e0eb83ff63 layers are now Observable and emitting LayerEdited messages
amazy
parents: 488
diff changeset
304
623
42dadae61fa9 renamed IObservable::EmitMessage() as BroadcastMessage()
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parents: 605
diff changeset
305 BroadcastMessage(RadiographyScene::WindowingChangedMessage(*this));
408
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parents:
diff changeset
306 }
6834c236b36d reorganization
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parents:
diff changeset
307
6834c236b36d reorganization
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parents:
diff changeset
308
1201
ab958fd99b07 RadiographyScene fixes
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parents: 1199
diff changeset
309 RadiographyLayer& RadiographyScene::UpdateText(size_t layerIndex,
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parents: 1199
diff changeset
310 const std::string& utf8,
1220
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
311 const std::string& font,
1201
ab958fd99b07 RadiographyScene fixes
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parents: 1199
diff changeset
312 unsigned int fontSize,
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parents: 1199
diff changeset
313 uint8_t foreground)
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parents: 1199
diff changeset
314 {
ab958fd99b07 RadiographyScene fixes
Alain Mazy <alain@mazy.be>
parents: 1199
diff changeset
315 RadiographyTextLayer& textLayer = dynamic_cast<RadiographyTextLayer&>(GetLayer(layerIndex));
1220
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
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316 textLayer.SetText(utf8, font, fontSize, foreground);
1201
ab958fd99b07 RadiographyScene fixes
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parents: 1199
diff changeset
317
ab958fd99b07 RadiographyScene fixes
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parents: 1199
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318 BroadcastMessage(RadiographyScene::ContentChangedMessage(*this, textLayer));
ab958fd99b07 RadiographyScene fixes
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parents: 1199
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319 BroadcastMessage(RadiographyScene::LayerEditedMessage(*this, textLayer));
ab958fd99b07 RadiographyScene fixes
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parents: 1199
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320 return textLayer;
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parents: 1199
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321 }
ab958fd99b07 RadiographyScene fixes
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parents: 1199
diff changeset
322
ab958fd99b07 RadiographyScene fixes
Alain Mazy <alain@mazy.be>
parents: 1199
diff changeset
323
1190
f417a0ae282b wip: TextLayer with new fonts
Alain Mazy <alain@mazy.be>
parents: 1131
diff changeset
324 RadiographyLayer& RadiographyScene::LoadText(const std::string& utf8,
1220
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
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325 const std::string& font,
1196
a5f2a6b04a31 RadiographyScene: windowing is now only applied to the Dicom layer
Alain Mazy <alain@mazy.be>
parents: 1190
diff changeset
326 unsigned int fontSize,
1190
f417a0ae282b wip: TextLayer with new fonts
Alain Mazy <alain@mazy.be>
parents: 1131
diff changeset
327 uint8_t foreground,
1220
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
328 RadiographyLayer::Geometry* centerGeometry,
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
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329 bool isCenterGeometry)
408
6834c236b36d reorganization
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parents:
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330 {
1298
8a0a62189f46 replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1285
diff changeset
331 std::unique_ptr<RadiographyTextLayer> alpha(new RadiographyTextLayer(IObservable::GetBroker(), *this));
1220
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
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332 alpha->SetText(utf8, font, fontSize, foreground);
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
333 if (centerGeometry != NULL)
430
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
334 {
1220
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
335 if (isCenterGeometry)
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
336 {
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
337 // modify geometry to reference the top left corner
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
338 double tlx = centerGeometry->GetPanX();
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
339 double tly = centerGeometry->GetPanY();
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
340 Extent2D textExtent = alpha->GetSceneExtent(false);
1220
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
341 tlx = tlx - (textExtent.GetWidth() / 2) * centerGeometry->GetPixelSpacingX();
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
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342 tly = tly - (textExtent.GetHeight() / 2) * centerGeometry->GetPixelSpacingY();
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
343 centerGeometry->SetPan(tlx, tly);
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
344 }
9ee6b28f53e8 RadiographyTextLayer: support multiple fonts
Alain Mazy <alain@mazy.be>
parents: 1201
diff changeset
345 alpha->SetGeometry(*centerGeometry);
430
b85f635f1eb5 added serialization for RadiographyScene
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parents: 428 427
diff changeset
346 }
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
347
1199
922d2e61aa5d RadiograpyScene: can now remove any layer + new key wrappers for Delete/Backspace
Alain Mazy <alain@mazy.be>
parents: 1196
diff changeset
348 RadiographyLayer& registeredLayer = RegisterLayer(alpha.release());
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Alain Mazy <alain@mazy.be>
parents: 1196
diff changeset
349
922d2e61aa5d RadiograpyScene: can now remove any layer + new key wrappers for Delete/Backspace
Alain Mazy <alain@mazy.be>
parents: 1196
diff changeset
350 BroadcastMessage(RadiographyScene::LayerEditedMessage(*this, registeredLayer));
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parents: 1196
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351 return registeredLayer;
408
6834c236b36d reorganization
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parents:
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352 }
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parents:
diff changeset
353
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
354
410
6decc0ba9da5 rename RadiographyScene::Layer as RadiographyLayer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 409
diff changeset
355 RadiographyLayer& RadiographyScene::LoadTestBlock(unsigned int width,
430
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
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diff changeset
356 unsigned int height,
b85f635f1eb5 added serialization for RadiographyScene
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diff changeset
357 RadiographyLayer::Geometry* geometry)
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
358 {
1298
8a0a62189f46 replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1285
diff changeset
359 std::unique_ptr<Orthanc::Image> block(new Orthanc::Image(Orthanc::PixelFormat_Grayscale8, width, height, false));
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
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360
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
361 for (unsigned int padding = 0;
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parents:
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362 (width > 2 * padding) && (height > 2 * padding);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
363 padding++)
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
364 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
365 uint8_t color;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
366 if (255 > 10 * padding)
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
367 {
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Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
368 color = 255 - 10 * padding;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
369 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
370 else
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
371 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
372 color = 0;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
373 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
374
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
375 Orthanc::ImageAccessor region;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
376 block->GetRegion(region, padding, padding, width - 2 * padding, height - 2 * padding);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
377 Orthanc::ImageProcessing::Set(region, color);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
378 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
379
430
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
380 return LoadAlphaBitmap(block.release(), geometry);
b85f635f1eb5 added serialization for RadiographyScene
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parents: 428 427
diff changeset
381 }
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
382
488
aede9b042cb7 now using ImageProcessing::FillPolygon
am@osimis.io
parents: 484
diff changeset
383 RadiographyLayer& RadiographyScene::LoadMask(const std::vector<Orthanc::ImageProcessing::ImagePoint>& corners,
475
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
384 const RadiographyDicomLayer& dicomLayer,
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
385 float foreground,
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
386 RadiographyLayer::Geometry* geometry)
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
387 {
1298
8a0a62189f46 replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1285
diff changeset
388 std::unique_ptr<RadiographyMaskLayer> mask(new RadiographyMaskLayer(IObservable::GetBroker(), *this, dicomLayer, foreground));
475
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
389 mask->SetCorners(corners);
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
390 if (geometry != NULL)
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
391 {
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
392 mask->SetGeometry(*geometry);
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
393 }
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
394
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
395 return RegisterLayer(mask.release());
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
396 }
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
397
3c28542229a3 added a mask layer in the RadiographyWidget (to be cleaned)
am@osimis.io
parents: 440
diff changeset
398
430
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
399 RadiographyLayer& RadiographyScene::LoadAlphaBitmap(Orthanc::ImageAccessor* bitmap, RadiographyLayer::Geometry *geometry)
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
400 {
1298
8a0a62189f46 replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1285
diff changeset
401 std::unique_ptr<RadiographyAlphaLayer> alpha(new RadiographyAlphaLayer(IObservable::GetBroker(), *this));
430
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
402 alpha->SetAlpha(bitmap);
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
403 if (geometry != NULL)
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
404 {
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
405 alpha->SetGeometry(*geometry);
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
406 }
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
407
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
408 return RegisterLayer(alpha.release());
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
409 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
410
553
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
411 RadiographyLayer& RadiographyScene::LoadDicomImage(Orthanc::ImageAccessor* dicomImage, // takes ownership
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
412 const std::string& instance,
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
413 unsigned int frame,
714
d2c0e347ddc2 deprecating DicomFrameConverter
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 623
diff changeset
414 Deprecated::DicomFrameConverter* converter, // takes ownership
739
be9c1530d40a deprecating enum SliceImageQuality
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 732
diff changeset
415 RadiographyPhotometricDisplayMode preferredPhotometricDisplayMode,
553
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
416 RadiographyLayer::Geometry* geometry)
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
417 {
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
418 RadiographyDicomLayer& layer = dynamic_cast<RadiographyDicomLayer&>(RegisterLayer(new RadiographyDicomLayer(IObservable::GetBroker(), *this)));
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
419
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
420 layer.SetInstance(instance, frame);
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
421
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
422 if (geometry != NULL)
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
423 {
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
424 layer.SetGeometry(*geometry);
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
425 }
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
426
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
427 layer.SetDicomFrameConverter(converter);
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
428 layer.SetSourceImage(dicomImage);
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
429 layer.SetPreferredPhotomotricDisplayMode(preferredPhotometricDisplayMode);
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
430
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
431 return layer;
587
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
432 }
553
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
433
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
434 RadiographyLayer& RadiographyScene::LoadDicomFrame(Deprecated::OrthancApiClient& orthanc,
417
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
435 const std::string& instance,
410
6decc0ba9da5 rename RadiographyScene::Layer as RadiographyLayer
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 409
diff changeset
436 unsigned int frame,
430
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
437 bool httpCompression,
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
438 RadiographyLayer::Geometry* geometry)
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
439 {
503
77e0eb83ff63 layers are now Observable and emitting LayerEdited messages
amazy
parents: 488
diff changeset
440 RadiographyDicomLayer& layer = dynamic_cast<RadiographyDicomLayer&>(RegisterLayer(new RadiographyDicomLayer(IObservable::GetBroker(), *this)));
430
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
441 layer.SetInstance(instance, frame);
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
442
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
443 if (geometry != NULL)
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
444 {
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
445 layer.SetGeometry(*geometry);
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
446 }
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
447
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
448 {
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
449 Deprecated::IWebService::HttpHeaders headers;
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
450 std::string uri = "/instances/" + instance + "/tags";
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
451
417
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
452 orthanc.GetBinaryAsync(
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
453 uri, headers,
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
454 new Callable<RadiographyScene, Deprecated::OrthancApiClient::BinaryResponseReadyMessage>
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
455 (*this, &RadiographyScene::OnTagsReceived), NULL,
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
456 new Orthanc::SingleValueObject<size_t>(layer.GetIndex()));
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
457 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
458
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
459 {
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
460 Deprecated::IWebService::HttpHeaders headers;
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
461 headers["Accept"] = "image/x-portable-arbitrarymap";
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
462
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
463 if (httpCompression)
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
464 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
465 headers["Accept-Encoding"] = "gzip";
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
466 }
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
467
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
468 std::string uri = ("/instances/" + instance + "/frames/" +
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
469 boost::lexical_cast<std::string>(frame) + "/image-uint16");
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
470
417
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
471 orthanc.GetBinaryAsync(
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
472 uri, headers,
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
473 new Callable<RadiographyScene, Deprecated::OrthancApiClient::BinaryResponseReadyMessage>
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
474 (*this, &RadiographyScene::OnFrameReceived), NULL,
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
475 new Orthanc::SingleValueObject<size_t>(layer.GetIndex()));
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
476 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
477
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
478 return layer;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
479 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
480
417
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
481
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
482 RadiographyLayer& RadiographyScene::LoadDicomWebFrame(Deprecated::IWebService& web)
417
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
483 {
503
77e0eb83ff63 layers are now Observable and emitting LayerEdited messages
amazy
parents: 488
diff changeset
484 RadiographyLayer& layer = RegisterLayer(new RadiographyDicomLayer(IObservable::GetBroker(), *this));
417
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
485
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
486
417
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
487 return layer;
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
488 }
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
489
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
490
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
491
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
492 void RadiographyScene::OnTagsReceived(const Deprecated::OrthancApiClient::BinaryResponseReadyMessage& message)
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
493 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
494 size_t index = dynamic_cast<const Orthanc::SingleValueObject<size_t>&>
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
495 (message.GetPayload()).GetValue();
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
496
1285
4f8fc8dbd2a1 changed log level
Alain Mazy <alain@mazy.be>
parents: 1273
diff changeset
497 VLOG(1) << "JSON received: " << message.GetUri().c_str()
4f8fc8dbd2a1 changed log level
Alain Mazy <alain@mazy.be>
parents: 1273
diff changeset
498 << " (" << message.GetAnswerSize() << " bytes) for layer " << index;
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
499
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
500 Layers::iterator layer = layers_.find(index);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
501 if (layer != layers_.end())
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
502 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
503 assert(layer->second != NULL);
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
504
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
505 OrthancPlugins::FullOrthancDataset dicom(message.GetAnswer(), message.GetAnswerSize());
430
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
506 dynamic_cast<RadiographyDicomLayer*>(layer->second)->SetDicomTags(dicom);
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
507
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
508 float c, w;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
509 if (!hasWindowing_ &&
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
510 layer->second->GetDefaultWindowing(c, w))
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
511 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
512 hasWindowing_ = true;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
513 windowingCenter_ = c;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
514 windowingWidth_ = w;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
515 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
516
623
42dadae61fa9 renamed IObservable::EmitMessage() as BroadcastMessage()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 605
diff changeset
517 BroadcastMessage(GeometryChangedMessage(*this, *(layer->second)));
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
518 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
519 }
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
520
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
521
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
522 void RadiographyScene::OnFrameReceived(const Deprecated::OrthancApiClient::BinaryResponseReadyMessage& message)
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
523 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
524 size_t index = dynamic_cast<const Orthanc::SingleValueObject<size_t>&>(message.GetPayload()).GetValue();
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
525
1285
4f8fc8dbd2a1 changed log level
Alain Mazy <alain@mazy.be>
parents: 1273
diff changeset
526 VLOG(1) << "DICOM frame received: " << message.GetUri().c_str()
4f8fc8dbd2a1 changed log level
Alain Mazy <alain@mazy.be>
parents: 1273
diff changeset
527 << " (" << message.GetAnswerSize() << " bytes) for layer " << index;
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
528
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
529 Layers::iterator layer = layers_.find(index);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
530 if (layer != layers_.end())
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
531 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
532 assert(layer->second != NULL);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
533
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
534 std::string content;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
535 if (message.GetAnswerSize() > 0)
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
536 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
537 content.assign(reinterpret_cast<const char*>(message.GetAnswer()), message.GetAnswerSize());
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
538 }
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
539
1298
8a0a62189f46 replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1285
diff changeset
540 std::unique_ptr<Orthanc::PamReader> reader(new Orthanc::PamReader);
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
541 reader->ReadFromMemory(content);
430
b85f635f1eb5 added serialization for RadiographyScene
am@osimis.io
parents: 428 427
diff changeset
542 dynamic_cast<RadiographyDicomLayer*>(layer->second)->SetSourceImage(reader.release());
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
543
623
42dadae61fa9 renamed IObservable::EmitMessage() as BroadcastMessage()
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 605
diff changeset
544 BroadcastMessage(ContentChangedMessage(*this, *(layer->second)));
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
545 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
546 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
547
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
548
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
549 Extent2D RadiographyScene::GetSceneExtent(bool minimal) const
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
550 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
551 Extent2D extent;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
552
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
553 for (Layers::const_iterator it = layers_.begin();
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
554 it != layers_.end(); ++it)
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
555 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
556 assert(it->second != NULL);
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
557 extent.Union(it->second->GetSceneExtent(minimal));
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
558 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
559
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
560 return extent;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
561 }
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
562
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
563
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
564 void RadiographyScene::Render(Orthanc::ImageAccessor& buffer,
409
99c9b3238008 AffineTransform2D
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 408
diff changeset
565 const AffineTransform2D& viewTransform,
1196
a5f2a6b04a31 RadiographyScene: windowing is now only applied to the Dicom layer
Alain Mazy <alain@mazy.be>
parents: 1190
diff changeset
566 ImageInterpolation interpolation,
a5f2a6b04a31 RadiographyScene: windowing is now only applied to the Dicom layer
Alain Mazy <alain@mazy.be>
parents: 1190
diff changeset
567 bool applyWindowing) const
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
568 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
569 // Render layers in the background-to-foreground order
1199
922d2e61aa5d RadiograpyScene: can now remove any layer + new key wrappers for Delete/Backspace
Alain Mazy <alain@mazy.be>
parents: 1196
diff changeset
570 for (size_t index = 0; index < nextLayerIndex_; index++)
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
571 {
1258
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
572 try
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
573 {
1258
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
574 Layers::const_iterator it = layers_.find(index);
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
575 if (it != layers_.end())
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
576 {
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
577 assert(it->second != NULL);
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
578 it->second->Render(buffer, viewTransform, interpolation, windowingCenter_, windowingWidth_, applyWindowing);
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
579 }
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
580 }
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
581 catch (Orthanc::OrthancException& ex)
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
582 {
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
583 LOG(ERROR) << "RadiographyScene::Render: " << index << ", OrthancException: " << ex.GetDetails();
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
584 throw ex; // rethrow because we want it to crash to see there's a problem !
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
585 }
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
586 catch (...)
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
587 {
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
588 LOG(ERROR) << "RadiographyScene::Render: " << index << ", unkown exception: ";
9c20ae049669 more logs to debug exceptions in Render
Alain Mazy <alain@mazy.be>
parents: 1257
diff changeset
589 throw; // rethrow because we want it to crash to see there's a problem !
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
590 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
591 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
592 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
593
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
594
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
595 bool RadiographyScene::LookupLayer(size_t& index /* out */,
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
596 double x,
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
597 double y) const
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
598 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
599 // Render layers in the foreground-to-background order
1199
922d2e61aa5d RadiograpyScene: can now remove any layer + new key wrappers for Delete/Backspace
Alain Mazy <alain@mazy.be>
parents: 1196
diff changeset
600 for (size_t i = nextLayerIndex_; i > 0; i--)
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
601 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
602 index = i - 1;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
603 Layers::const_iterator it = layers_.find(index);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
604 if (it != layers_.end())
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
605 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
606 assert(it->second != NULL);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
607 if (it->second->Contains(x, y))
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
608 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
609 return true;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
610 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
611 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
612 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
613
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
614 return false;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
615 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
616
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
617
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
618 void RadiographyScene::DrawBorder(CairoContext& context,
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
619 unsigned int layer,
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
620 double zoom)
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
621 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
622 Layers::const_iterator found = layers_.find(layer);
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
623
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
624 if (found != layers_.end())
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
625 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
626 context.SetSourceColor(255, 0, 0);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
627 found->second->DrawBorders(context, zoom);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
628 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
629 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
630
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
631
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
632 void RadiographyScene::GetRange(float& minValue,
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
633 float& maxValue) const
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
634 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
635 bool first = true;
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
636
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
637 for (Layers::const_iterator it = layers_.begin();
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
638 it != layers_.end(); it++)
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
639 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
640 assert(it->second != NULL);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
641
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
642 float a, b;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
643 if (it->second->GetRange(a, b))
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
644 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
645 if (first)
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
646 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
647 minValue = a;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
648 maxValue = b;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
649 first = false;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
650 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
651 else
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
652 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
653 minValue = std::min(a, minValue);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
654 maxValue = std::max(b, maxValue);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
655 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
656 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
657 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
658
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
659 if (first)
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
660 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
661 minValue = 0;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
662 maxValue = 0;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
663 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
664 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
665
1259
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
666 void RadiographyScene::ExtractLayerFromRenderedScene(Orthanc::ImageAccessor& layer,
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
667 const Orthanc::ImageAccessor& renderedScene,
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
668 size_t layerIndex,
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
669 bool isCropped,
1259
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
670 ImageInterpolation interpolation)
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
671 {
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
672 Extent2D sceneExtent = GetSceneExtent(isCropped);
1259
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
673
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
674 double pixelSpacingX = sceneExtent.GetWidth() / renderedScene.GetWidth();
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
675 double pixelSpacingY = sceneExtent.GetHeight() / renderedScene.GetHeight();
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
676
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
677 AffineTransform2D view = AffineTransform2D::Combine(
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
678 AffineTransform2D::CreateScaling(1.0 / pixelSpacingX, 1.0 / pixelSpacingY),
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
679 AffineTransform2D::CreateOffset(-sceneExtent.GetX1(), -sceneExtent.GetY1()));
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
680
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
681 AffineTransform2D layerToSceneTransform = AffineTransform2D::Combine(
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
682 view,
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
683 GetLayer(layerIndex).GetTransform());
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
684
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
685 AffineTransform2D sceneToLayerTransform = AffineTransform2D::Invert(layerToSceneTransform);
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
686 sceneToLayerTransform.Apply(layer, renderedScene, interpolation, false);
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
687 }
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
688
481
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
689 Orthanc::Image* RadiographyScene::ExportToImage(double pixelSpacingX,
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
690 double pixelSpacingY,
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
691 ImageInterpolation interpolation,
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
692 bool invert,
1196
a5f2a6b04a31 RadiographyScene: windowing is now only applied to the Dicom layer
Alain Mazy <alain@mazy.be>
parents: 1190
diff changeset
693 int64_t maxValue /* for inversion */,
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
694 bool autoCrop,
1196
a5f2a6b04a31 RadiographyScene: windowing is now only applied to the Dicom layer
Alain Mazy <alain@mazy.be>
parents: 1190
diff changeset
695 bool applyWindowing)
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
696 {
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
697 if (pixelSpacingX <= 0 ||
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
698 pixelSpacingY <= 0)
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
699 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
700 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
701 }
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
702
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
703 Extent2D extent = GetSceneExtent(autoCrop);
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
704
928
1b49e78d91d0 fix for older compilers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 923
diff changeset
705 int w = boost::math::iround(extent.GetWidth() / pixelSpacingX);
1b49e78d91d0 fix for older compilers
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 923
diff changeset
706 int h = boost::math::iround(extent.GetHeight() / pixelSpacingY);
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
707
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
708 if (w < 0 || h < 0)
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
709 {
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
710 throw Orthanc::OrthancException(Orthanc::ErrorCode_InternalError);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
711 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
712
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
713 Orthanc::Image layers(Orthanc::PixelFormat_Float32,
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
714 static_cast<unsigned int>(w),
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
715 static_cast<unsigned int>(h), false);
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
716
409
99c9b3238008 AffineTransform2D
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 408
diff changeset
717 AffineTransform2D view = AffineTransform2D::Combine(
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
718 AffineTransform2D::CreateScaling(1.0 / pixelSpacingX, 1.0 / pixelSpacingY),
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
719 AffineTransform2D::CreateOffset(-extent.GetX1(), -extent.GetY1()));
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
720
432
4eb96c6b4e96 improved handling of MONOCHROME1, background and invertion
am@osimis.io
parents: 431
diff changeset
721 // wipe background before rendering
1259
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
722 if (GetPreferredPhotomotricDisplayMode() == RadiographyPhotometricDisplayMode_Monochrome1)
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
723 {
1321
d4e6cd35107b Clarified GetExtent/GetSceneExtent
Alain Mazy <alain@mazy.be>
parents: 1298
diff changeset
724 Orthanc::ImageProcessing::Set(layers, 65535);
1259
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
725 }
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
726 else
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
727 {
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
728 Orthanc::ImageProcessing::Set(layers, 0);
69177b10e2b9 various fixes for RadiographyScene: support text layers outside the dicom layer, fix background in this case + extract dicom from rendered scene
Alain Mazy <alain@mazy.be>
parents: 1258
diff changeset
729 }
432
4eb96c6b4e96 improved handling of MONOCHROME1, background and invertion
am@osimis.io
parents: 431
diff changeset
730
1196
a5f2a6b04a31 RadiographyScene: windowing is now only applied to the Dicom layer
Alain Mazy <alain@mazy.be>
parents: 1190
diff changeset
731 Render(layers, view, interpolation, applyWindowing);
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
732
1298
8a0a62189f46 replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1285
diff changeset
733 std::unique_ptr<Orthanc::Image> rendered(new Orthanc::Image(Orthanc::PixelFormat_Grayscale16,
553
92305ee35b1c web-worker consequences: give access to lower level data
Alain Mazy <alain@mazy.be>
parents: 541
diff changeset
734 layers.GetWidth(), layers.GetHeight(), false));
481
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
735
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
736 Orthanc::ImageProcessing::Convert(*rendered, layers);
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
737 if (invert)
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
738 Orthanc::ImageProcessing::Invert(*rendered, maxValue);
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
739
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
740 return rendered.release();
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
741 }
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
742
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
743
587
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
744 Orthanc::Image* RadiographyScene::ExportToCreateDicomRequestAndImage(Json::Value& createDicomRequestContent,
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
745 const Json::Value& dicomTags,
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
746 const std::string& parentOrthancId,
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
747 double pixelSpacingX,
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
748 double pixelSpacingY,
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
749 bool invert,
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
750 bool autoCrop,
587
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
751 ImageInterpolation interpolation)
481
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
752 {
541
Alain Mazy <alain@mazy.be>
parents: 507
diff changeset
753 LOG(INFO) << "Exporting RadiographyScene to DICOM";
Alain Mazy <alain@mazy.be>
parents: 507
diff changeset
754
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
755 std::unique_ptr<Orthanc::Image> rendered(ExportToImage(pixelSpacingX, pixelSpacingY, interpolation, autoCrop, false)); // note: we don't invert the image in the pixels data because we'll set the PhotometricDisplayMode correctly in the DICOM tags
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
756
483
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
757 createDicomRequestContent["Tags"] = dicomTags;
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
758
739
be9c1530d40a deprecating enum SliceImageQuality
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 732
diff changeset
759 RadiographyPhotometricDisplayMode photometricMode = GetPreferredPhotomotricDisplayMode();
be9c1530d40a deprecating enum SliceImageQuality
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 732
diff changeset
760 if ((invert && photometricMode != RadiographyPhotometricDisplayMode_Monochrome2) ||
be9c1530d40a deprecating enum SliceImageQuality
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 732
diff changeset
761 (!invert && photometricMode == RadiographyPhotometricDisplayMode_Monochrome1))
436
04711a2e12cd fix crop + export photometric interpretation correctly
am@osimis.io
parents: 432
diff changeset
762 {
483
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
763 createDicomRequestContent["Tags"]["PhotometricInterpretation"] = "MONOCHROME1";
436
04711a2e12cd fix crop + export photometric interpretation correctly
am@osimis.io
parents: 432
diff changeset
764 }
04711a2e12cd fix crop + export photometric interpretation correctly
am@osimis.io
parents: 432
diff changeset
765 else
04711a2e12cd fix crop + export photometric interpretation correctly
am@osimis.io
parents: 432
diff changeset
766 {
483
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
767 createDicomRequestContent["Tags"]["PhotometricInterpretation"] = "MONOCHROME2";
436
04711a2e12cd fix crop + export photometric interpretation correctly
am@osimis.io
parents: 432
diff changeset
768 }
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
769
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
770 // WARNING: The order of PixelSpacing is Y/X. We use "%0.8f" to
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
771 // avoid floating-point numbers to grow over 16 characters,
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
772 // which would be invalid according to DICOM standard
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
773 // ("dciodvfy" would complain).
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
774 char buf[32];
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
775 sprintf(buf, "%0.8f\\%0.8f", pixelSpacingY, pixelSpacingX);
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
776
483
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
777 createDicomRequestContent["Tags"]["PixelSpacing"] = buf;
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
778
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
779 float center, width;
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
780 if (GetWindowing(center, width))
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
781 {
483
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
782 createDicomRequestContent["Tags"]["WindowCenter"] =
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
783 boost::lexical_cast<std::string>(boost::math::iround(center));
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
784
483
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
785 createDicomRequestContent["Tags"]["WindowWidth"] =
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
786 boost::lexical_cast<std::string>(boost::math::iround(width));
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
787 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
788
587
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
789 if (!parentOrthancId.empty())
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
790 {
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
791 createDicomRequestContent["Parent"] = parentOrthancId;
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
792 }
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
793
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
794 return rendered.release();
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
795 }
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
796
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
797
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
798 void RadiographyScene::ExportToCreateDicomRequest(Json::Value& createDicomRequestContent,
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
799 const Json::Value& dicomTags,
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
800 const std::string& parentOrthancId,
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
801 double pixelSpacingX,
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
802 double pixelSpacingY,
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
803 bool invert,
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
804 bool autoCrop,
587
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
805 ImageInterpolation interpolation,
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
806 bool usePam)
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
807 {
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
808 LOG(INFO) << "Exporting RadiographyScene to DICOM";
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
809 VLOG(1) << "Exporting RadiographyScene to: export to image";
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
810
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
811 std::unique_ptr<Orthanc::Image> rendered(ExportToCreateDicomRequestAndImage(createDicomRequestContent, dicomTags, parentOrthancId, pixelSpacingX, pixelSpacingY, invert, autoCrop, interpolation));
587
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
812
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
813 // convert the image into base64 for inclusing in the createDicomRequest
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
814 std::string base64;
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
815
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
816 {
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
817 std::string content;
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
818
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
819 if (usePam)
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
820 {
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
821 VLOG(1) << "Exporting RadiographyScene: convert to PAM";
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
822 Orthanc::PamWriter writer;
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
823 writer.WriteToMemory(content, *rendered);
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
824 }
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
825 else
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
826 {
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
827 Orthanc::PngWriter writer;
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
828 writer.WriteToMemory(content, *rendered);
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
829 }
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
830
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
831 VLOG(1) << "Exporting RadiographyScene: encoding to base64";
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
832 Orthanc::Toolbox::EncodeBase64(base64, content);
848170ca4351 more export functions
Alain Mazy <alain@mazy.be>
parents: 553
diff changeset
833 }
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
834
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
835 // This is Data URI scheme: https://en.wikipedia.org/wiki/Data_URI_scheme
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
836 createDicomRequestContent["Content"] = ("data:" +
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
837 std::string(usePam ? Orthanc::MIME_PAM : Orthanc::MIME_PNG) +
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
838 ";base64," + base64);
481
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
839
541
Alain Mazy <alain@mazy.be>
parents: 507
diff changeset
840 VLOG(1) << "Exporting RadiographyScene: create-dicom request is ready";
484
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
841 }
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
842
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
843
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
844 void RadiographyScene::ExportDicom(Deprecated::OrthancApiClient& orthanc,
484
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
845 const Json::Value& dicomTags,
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
846 const std::string& parentOrthancId,
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
847 double pixelSpacingX,
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
848 double pixelSpacingY,
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
849 bool invert,
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
850 bool autoCrop,
484
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
851 ImageInterpolation interpolation,
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
852 bool usePam)
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
853 {
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
854 Json::Value createDicomRequestContent;
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
855
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
856 ExportToCreateDicomRequest(createDicomRequestContent, dicomTags, parentOrthancId, pixelSpacingX, pixelSpacingY, invert, autoCrop, interpolation, usePam);
484
7bf001b9d244 re-added ExportToCreateDicomRequest
Alain Mazy <alain@mazy.be>
parents: 483
diff changeset
857
481
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
858 orthanc.PostJsonAsyncExpectJson(
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
859 "/tools/create-dicom", createDicomRequestContent,
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
860 new Callable<RadiographyScene, Deprecated::OrthancApiClient::JsonResponseReadyMessage>
481
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
861 (*this, &RadiographyScene::OnDicomExported),
159a465e27bd reworked RadiographyScene export to export to an Orthanc::Image too
am@osimis.io
parents: 475
diff changeset
862 NULL, NULL);
483
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
863
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
864 }
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
865
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
866
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
867 // Export using PAM is faster than using PNG, but requires Orthanc
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
868 // core >= 1.4.3
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
869 void RadiographyScene::ExportDicom(Deprecated::OrthancApiClient& orthanc,
483
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
870 const Orthanc::DicomMap& dicom,
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
871 const std::string& parentOrthancId,
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
872 double pixelSpacingX,
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
873 double pixelSpacingY,
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
874 bool invert,
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
875 bool autoCrop,
483
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
876 ImageInterpolation interpolation,
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
877 bool usePam)
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
878 {
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
879 std::set<Orthanc::DicomTag> tags;
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
880 dicom.GetTags(tags);
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
881
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
882 Json::Value jsonTags = Json::objectValue;
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
883
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
884 for (std::set<Orthanc::DicomTag>::const_iterator
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
885 tag = tags.begin(); tag != tags.end(); ++tag)
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
886 {
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
887 const Orthanc::DicomValue& value = dicom.GetValue(*tag);
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
888 if (!value.IsNull() &&
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
889 !value.IsBinary())
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
890 {
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
891 jsonTags[tag->Format()] = value.GetContent();
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
892 }
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
893 }
29fc066b6f65 Export now accepts Json::Value
am@osimis.io
parents: 481
diff changeset
894
1330
a72c2c9af49a minimal option for GetSceneExtent, especially for masks
Alain Mazy <alain@mazy.be>
parents: 1321
diff changeset
895 ExportDicom(orthanc, jsonTags, parentOrthancId, pixelSpacingX, pixelSpacingY, invert, autoCrop, interpolation, usePam);
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
896 }
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
897
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
898 void RadiographyScene::OnDicomExported(const Deprecated::OrthancApiClient::JsonResponseReadyMessage& message)
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
899 {
417
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
900 LOG(INFO) << "DICOM export was successful: "
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
901 << message.GetJson().toStyledString();
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
902 }
417
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
903
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
904
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
905 void RadiographyScene::OnDicomWebReceived(const Deprecated::IWebService::HttpRequestSuccessMessage& message)
417
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
906 {
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
907 LOG(INFO) << "DICOMweb WADO-RS received: " << message.GetAnswerSize() << " bytes";
418
c23df8b3433b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 417
diff changeset
908
726
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
909 const Deprecated::IWebService::HttpHeaders& h = message.GetAnswerHttpHeaders();
4f2416d519b4 moving layers, widgets and loaders to Deprecated namespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 714
diff changeset
910 for (Deprecated::IWebService::HttpHeaders::const_iterator
426
660fe6f6bf4a split Export in 2
am@osimis.io
parents: 425
diff changeset
911 it = h.begin(); it != h.end(); ++it)
418
c23df8b3433b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 417
diff changeset
912 {
c23df8b3433b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 417
diff changeset
913 printf("[%s] = [%s]\n", it->first.c_str(), it->second.c_str());
c23df8b3433b refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 417
diff changeset
914 }
417
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
915 }
aee3d7941c9b preparing to load images using DICOMweb
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 412
diff changeset
916
1373
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
917 void RadiographyScene::ExportToScene2D(Scene2D& output) const
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
918 {
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
919 int depth = 0;
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
920 for (Layers::const_iterator it = layers_.begin();
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
921 it != layers_.end(); ++it)
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
922 {
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
923 assert(it->second != NULL);
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
924
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
925 std::unique_ptr<ISceneLayer> layer;
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
926 if (dynamic_cast<RadiographyDicomLayer*>(it->second))
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
927 {
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
928 RadiographyDicomLayer* oldLayer = dynamic_cast<RadiographyDicomLayer*>(it->second);
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
929
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
930 std::unique_ptr<FloatTextureSceneLayer> newLayer(new FloatTextureSceneLayer(*(oldLayer->GetSourceImage())));
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
931
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
932 newLayer->SetOrigin(oldLayer->GetGeometry().GetPanX(),
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
933 oldLayer->GetGeometry().GetPanY()
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
934 );
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
935 newLayer->SetAngle(oldLayer->GetGeometry().GetAngle());
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
936
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
937 layer.reset(newLayer.release());
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
938
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
939 // TODO: windowing dynamic_cast
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
940 }
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
941 else if (dynamic_cast<RadiographyTextLayer*>(it->second))
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
942 {
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
943 RadiographyTextLayer* oldLayer = dynamic_cast<RadiographyTextLayer*>(it->second);
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
944
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
945 std::unique_ptr<TextSceneLayer> newLayer(new TextSceneLayer());
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
946
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
947 newLayer->SetText(oldLayer->GetText());
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
948 newLayer->SetColor(oldLayer->GetForegroundGreyLevel(),
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
949 oldLayer->GetForegroundGreyLevel(),
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
950 oldLayer->GetForegroundGreyLevel()
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
951 );
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
952 newLayer->SetPosition(oldLayer->GetGeometry().GetPanX(),
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
953 oldLayer->GetGeometry().GetPanY()
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
954 );
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
955 newLayer->SetFontIndex(1);
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
956 newLayer->SetAnchor(BitmapAnchor_TopLeft);
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
957 //newLayer->SetAngle(oldLayer->GetGeometry().GetAngle());
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
958
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
959 layer.reset(newLayer.release());
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
960 }
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
961
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
962 output.SetLayer(depth++, layer.release());
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
963
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
964 }
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
965
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
966 }
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
967
408
6834c236b36d reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
968 }
1373
e0cdf8688d56 wip: from RadiographyScene to Scene2D
Alain Mazy <alain@mazy.be>
parents: 1330
diff changeset
969