Mercurial > hg > orthanc-stone
annotate OrthancStone/Sources/Toolbox/DicomInstanceParameters.h @ 1636:d1e0b08b809d
cont
author | Sebastien Jodogne <s.jodogne@gmail.com> |
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date | Tue, 10 Nov 2020 16:20:22 +0100 |
parents | 1a714e21ea7c |
children | d569effcd433 |
rev | line source |
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746 | 1 /** |
2 * Stone of Orthanc | |
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics | |
4 * Department, University Hospital of Liege, Belgium | |
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5 * Copyright (C) 2017-2020 Osimis S.A., Belgium |
746 | 6 * |
7 * This program is free software: you can redistribute it and/or | |
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8 * modify it under the terms of the GNU Lesser General Public License |
746 | 9 * as published by the Free Software Foundation, either version 3 of |
10 * the License, or (at your option) any later version. | |
11 * | |
12 * This program is distributed in the hope that it will be useful, but | |
13 * WITHOUT ANY WARRANTY; without even the implied warranty of | |
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU |
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15 * Lesser General Public License for more details. |
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16 * |
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17 * You should have received a copy of the GNU Lesser General Public |
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18 * License along with this program. If not, see |
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19 * <http://www.gnu.org/licenses/>. |
746 | 20 **/ |
21 | |
22 | |
23 #pragma once | |
24 | |
25 #include "../StoneEnumerations.h" | |
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26 #include "../Scene2D/LookupTableTextureSceneLayer.h" |
746 | 27 #include "../Toolbox/CoordinateSystem3D.h" |
28 | |
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29 #include <IDynamicObject.h> |
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30 #include <DicomFormat/DicomImageInformation.h> |
746 | 31 |
32 namespace OrthancStone | |
33 { | |
34 class DicomInstanceParameters : | |
35 public Orthanc::IDynamicObject /* to be used as a payload to SlicesSorter */ | |
36 { | |
37 // This class supersedes the deprecated "DicomFrameConverter" | |
38 | |
39 private: | |
1636 | 40 struct Data // Plain old struct to ease the copy constructor |
746 | 41 { |
42 std::string orthancInstanceId_; | |
43 std::string studyInstanceUid_; | |
44 std::string seriesInstanceUid_; | |
45 std::string sopInstanceUid_; | |
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46 Orthanc::DicomImageInformation imageInformation_; // TODO REMOVE |
746 | 47 SopClassUid sopClassUid_; |
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48 unsigned int numberOfFrames_; |
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49 unsigned int width_; |
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50 unsigned int height_; |
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51 double sliceThickness_; |
746 | 52 double pixelSpacingX_; |
53 double pixelSpacingY_; | |
54 CoordinateSystem3D geometry_; | |
55 Vector frameOffsets_; | |
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56 bool isColor_; // TODO REMOVE |
746 | 57 bool hasRescale_; |
58 double rescaleIntercept_; | |
59 double rescaleSlope_; | |
60 bool hasDefaultWindowing_; | |
61 float defaultWindowingCenter_; | |
62 float defaultWindowingWidth_; | |
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63 Orthanc::PixelFormat expectedPixelFormat_; // TODO REMOVE |
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64 bool hasIndexInSeries_; |
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65 unsigned int indexInSeries_; |
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66 std::string doseUnits_; |
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67 double doseGridScaling_; |
746 | 68 |
1571 | 69 explicit Data(const Orthanc::DicomMap& dicom); |
746 | 70 }; |
71 | |
72 | |
73 Data data_; | |
74 | |
1636 | 75 void ApplyRescaleAndDoseScaling(Orthanc::ImageAccessor& image, |
76 bool useDouble) const; | |
746 | 77 |
78 public: | |
1571 | 79 explicit DicomInstanceParameters(const DicomInstanceParameters& other) : |
80 data_(other.data_) | |
746 | 81 { |
82 } | |
83 | |
1571 | 84 explicit DicomInstanceParameters(const Orthanc::DicomMap& dicom) : |
746 | 85 data_(dicom) |
86 { | |
87 } | |
88 | |
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89 DicomInstanceParameters* Clone() const |
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90 { |
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91 return new DicomInstanceParameters(*this); |
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92 } |
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93 |
746 | 94 void SetOrthancInstanceIdentifier(const std::string& id) |
95 { | |
96 data_.orthancInstanceId_ = id; | |
97 } | |
98 | |
99 const std::string& GetOrthancInstanceIdentifier() const | |
100 { | |
101 return data_.orthancInstanceId_; | |
102 } | |
103 | |
104 const Orthanc::DicomImageInformation& GetImageInformation() const | |
105 { | |
106 return data_.imageInformation_; | |
107 } | |
108 | |
109 const std::string& GetStudyInstanceUid() const | |
110 { | |
111 return data_.studyInstanceUid_; | |
112 } | |
113 | |
114 const std::string& GetSeriesInstanceUid() const | |
115 { | |
116 return data_.seriesInstanceUid_; | |
117 } | |
118 | |
119 const std::string& GetSopInstanceUid() const | |
120 { | |
121 return data_.sopInstanceUid_; | |
122 } | |
123 | |
124 SopClassUid GetSopClassUid() const | |
125 { | |
126 return data_.sopClassUid_; | |
127 } | |
128 | |
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129 unsigned int GetNumberOfFrames() const |
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130 { |
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131 return data_.numberOfFrames_; |
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132 } |
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133 |
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134 unsigned int GetWidth() const |
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135 { |
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136 return data_.width_; |
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137 } |
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138 |
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139 unsigned int GetHeight() const |
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140 { |
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141 return data_.height_; |
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142 } |
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143 |
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144 double GetSliceThickness() const |
746 | 145 { |
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146 return data_.sliceThickness_; |
746 | 147 } |
148 | |
149 double GetPixelSpacingX() const | |
150 { | |
151 return data_.pixelSpacingX_; | |
152 } | |
153 | |
154 double GetPixelSpacingY() const | |
155 { | |
156 return data_.pixelSpacingY_; | |
157 } | |
158 | |
159 const CoordinateSystem3D& GetGeometry() const | |
160 { | |
161 return data_.geometry_; | |
162 } | |
163 | |
1636 | 164 CoordinateSystem3D GetFrameGeometry(unsigned int frame) const; |
746 | 165 |
166 bool IsPlaneWithinSlice(unsigned int frame, | |
1636 | 167 const CoordinateSystem3D& plane) const; |
746 | 168 |
169 bool IsColor() const | |
170 { | |
171 return data_.isColor_; | |
172 } | |
173 | |
174 bool HasRescale() const | |
175 { | |
176 return data_.hasRescale_; | |
177 } | |
178 | |
179 double GetRescaleIntercept() const; | |
180 | |
181 double GetRescaleSlope() const; | |
182 | |
183 bool HasDefaultWindowing() const | |
184 { | |
185 return data_.hasDefaultWindowing_; | |
186 } | |
187 | |
188 float GetDefaultWindowingCenter() const; | |
189 | |
190 float GetDefaultWindowingWidth() const; | |
191 | |
192 Orthanc::PixelFormat GetExpectedPixelFormat() const | |
193 { | |
194 return data_.expectedPixelFormat_; | |
195 } | |
196 | |
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197 Orthanc::ImageAccessor* ConvertToFloat(const Orthanc::ImageAccessor& pixelData) const; |
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198 |
746 | 199 TextureBaseSceneLayer* CreateTexture(const Orthanc::ImageAccessor& pixelData) const; |
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200 |
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201 LookupTableTextureSceneLayer* CreateLookupTableTexture(const Orthanc::ImageAccessor& pixelData) const; |
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202 |
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203 bool HasIndexInSeries() const |
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204 { |
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205 return data_.hasIndexInSeries_; |
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206 } |
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207 |
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208 unsigned int GetIndexInSeries() const; |
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209 |
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210 const std::string& GetDoseUnits() const |
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211 { |
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212 return data_.doseUnits_; |
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213 } |
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214 |
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215 void SetDoseGridScaling(double value) |
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216 { |
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217 data_.doseGridScaling_ = value; |
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218 } |
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219 |
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220 double GetDoseGridScaling() const |
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221 { |
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222 return data_.doseGridScaling_; |
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223 } |
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224 |
1636 | 225 double ApplyRescale(double value) const; |
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226 |
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227 // Required for RT-DOSE |
1636 | 228 bool ComputeRegularSpacing(double& target) const; |
746 | 229 }; |
230 } |