Mercurial > hg > orthanc-stone

annotate Framework/Toolbox/OrthancSlicesLoader.cpp @ 300:b4abaeb783b1 am-callable-and-promise

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messaging refactoring almost complete: works fine in native
author am@osimis.io
date Tue, 18 Sep 2018 15:23:21 +0200
parents 3897f9f28cfa
children 3a4ca166fafa
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1 /**
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2 * Stone of Orthanc
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3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
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4 * Department, University Hospital of Liege, Belgium
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5 * Copyright (C) 2017-2018 Osimis S.A., Belgium
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6 *
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7 * This program is free software: you can redistribute it and/or
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8 * modify it under the terms of the GNU Affero General Public License
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9 * as published by the Free Software Foundation, either version 3 of
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10 * the License, or (at your option) any later version.
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11 *
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12 * This program is distributed in the hope that it will be useful, but
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13 * WITHOUT ANY WARRANTY; without even the implied warranty of
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14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
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15 * Affero General Public License for more details.
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16 *
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17 * You should have received a copy of the GNU Affero General Public License
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18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
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19 **/
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20
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21
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22 #include "OrthancSlicesLoader.h"
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23
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24 #include "MessagingToolbox.h"
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25
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26 #include <Core/Compression/GzipCompressor.h>
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27 #include <Core/Endianness.h>
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28 #include <Core/Images/Image.h>
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29 #include <Core/Images/ImageProcessing.h>
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30 #include <Core/Images/JpegReader.h>
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31 #include <Core/Images/PngReader.h>
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32 #include <Core/Images/PamReader.h>
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33 #include <Core/Logging.h>
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34 #include <Core/OrthancException.h>
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35 #include <Core/Toolbox.h>
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36 #include <Plugins/Samples/Common/FullOrthancDataset.h>
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37
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38 #include <boost/lexical_cast.hpp>
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41
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42 /**
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43 * TODO This is a SLOW implementation of base64 decoding, because
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44 * "Orthanc::Toolbox::DecodeBase64()" does not work properly with
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45 * WASM. UNDERSTAND WHY.
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46 * https://stackoverflow.com/a/34571089/881731
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47 **/
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48 static std::string base64_decode(const std::string &in)
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49 {
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50 std::string out;
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51
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52 std::vector<int> T(256,-1);
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53 for (int i=0; i<64; i++) T["ABCDEFGHIJKLMNOPQRSTUVWXYZabcdefghijklmnopqrstuvwxyz0123456789+/"[i]] = i;
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54
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55 int val=0, valb=-8;
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56 for (size_t i = 0; i < in.size(); i++) {
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57 unsigned char c = in[i];
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58 if (T[c] == -1) break;
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59 val = (val<<6) + T[c];
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60 valb += 6;
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61 if (valb>=0) {
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62 out.push_back(char((val>>valb)&0xFF));
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63 valb-=8;
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64 }
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65 }
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66 return out;
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67 }
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71 namespace OrthancStone
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72 {
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73 class OrthancSlicesLoader::Operation : public Orthanc::IDynamicObject
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74 {
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75 private:
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76 Mode mode_;
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77 unsigned int frame_;
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78 unsigned int sliceIndex_;
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79 const Slice* slice_;
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80 std::string instanceId_;
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81 SliceImageQuality quality_;
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82
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83 Operation(Mode mode) :
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84 mode_(mode)
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85 {
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86 }
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87
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88 public:
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89 Mode GetMode() const
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90 {
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91 return mode_;
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92 }
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93
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94 SliceImageQuality GetQuality() const
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95 {
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96 assert(mode_ == Mode_LoadImage ||
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97 mode_ == Mode_LoadRawImage);
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98 return quality_;
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99 }
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100
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101 unsigned int GetSliceIndex() const
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102 {
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103 assert(mode_ == Mode_LoadImage ||
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104 mode_ == Mode_LoadRawImage);
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105 return sliceIndex_;
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106 }
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107
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108 const Slice& GetSlice() const
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109 {
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110 assert(mode_ == Mode_LoadImage ||
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111 mode_ == Mode_LoadRawImage);
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112 assert(slice_ != NULL);
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113 return *slice_;
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114 }
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115
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116 unsigned int GetFrame() const
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117 {
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118 assert(mode_ == Mode_FrameGeometry);
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119 return frame_;
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120 }
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121
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122 const std::string& GetInstanceId() const
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123 {
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124 assert(mode_ == Mode_FrameGeometry ||
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125 mode_ == Mode_InstanceGeometry);
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126 return instanceId_;
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127 }
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128
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129 static Operation* DownloadInstanceGeometry(const std::string& instanceId)
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130 {
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131 std::auto_ptr<Operation> operation(new Operation(Mode_InstanceGeometry));
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132 operation->instanceId_ = instanceId;
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133 return operation.release();
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134 }
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135
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136 static Operation* DownloadFrameGeometry(const std::string& instanceId,
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137 unsigned int frame)
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138 {
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139 std::auto_ptr<Operation> operation(new Operation(Mode_FrameGeometry));
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140 operation->instanceId_ = instanceId;
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141 operation->frame_ = frame;
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142 return operation.release();
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143 }
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144
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145 static Operation* DownloadSliceImage(unsigned int sliceIndex,
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146 const Slice& slice,
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147 SliceImageQuality quality)
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148 {
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149 std::auto_ptr<Operation> tmp(new Operation(Mode_LoadImage));
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150 tmp->sliceIndex_ = sliceIndex;
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151 tmp->slice_ = &slice;
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152 tmp->quality_ = quality;
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153 return tmp.release();
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154 }
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155
117
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156 static Operation* DownloadSliceRawImage(unsigned int sliceIndex,
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157 const Slice& slice)
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158 {
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159 std::auto_ptr<Operation> tmp(new Operation(Mode_LoadRawImage));
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160 tmp->sliceIndex_ = sliceIndex;
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161 tmp->slice_ = &slice;
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162 tmp->quality_ = SliceImageQuality_InternalRaw;
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163 return tmp.release();
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164 }
257
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165
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166 static Operation* DownloadDicomFile(const Slice& slice)
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167 {
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168 std::auto_ptr<Operation> tmp(new Operation(Mode_LoadDicomFile));
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169 tmp->slice_ = &slice;
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170 return tmp.release();
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171 }
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172
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173 };
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174
93
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175 void OrthancSlicesLoader::NotifySliceImageSuccess(const Operation& operation,
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176 std::auto_ptr<Orthanc::ImageAccessor>& image)
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177 {
99
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178 if (image.get() == NULL)
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179 {
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180 throw Orthanc::OrthancException(Orthanc::ErrorCode_NullPointer);
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181 }
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182 else
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183 {
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184 OrthancSlicesLoader::SliceImageReadyMessage msg(operation.GetSliceIndex(), operation.GetSlice(), image, operation.GetQuality());
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185 EmitMessage(msg);
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186 }
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187 }
252
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188
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189
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190 void OrthancSlicesLoader::NotifySliceImageError(const Operation& operation)
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191 {
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192 OrthancSlicesLoader::SliceImageErrorMessage msg(operation.GetSliceIndex(), operation.GetSlice(), operation.GetQuality());
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193 EmitMessage(msg);
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194 }
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195
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196
120
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197 void OrthancSlicesLoader::SortAndFinalizeSlices()
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198 {
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199 bool ok = false;
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200
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201 if (slices_.GetSliceCount() > 0)
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202 {
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203 Vector normal;
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204 if (slices_.SelectNormal(normal))
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205 {
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206 slices_.FilterNormal(normal);
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207 slices_.SetNormal(normal);
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208 slices_.Sort();
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209 ok = true;
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210 }
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211 }
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212
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213 state_ = State_GeometryReady;
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214
120
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215 if (ok)
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216 {
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217 LOG(INFO) << "Loaded a series with " << slices_.GetSliceCount() << " slice(s)";
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218 EmitMessage(SliceGeometryReadyMessage(*this));
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219 }
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220 else
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221 {
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222 LOG(ERROR) << "This series is empty";
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223 EmitMessage(SliceGeometryErrorMessage(*this));
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224 }
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225 }
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226
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227 void OrthancSlicesLoader::OnGeometryError(const OrthancApiClient::HttpErrorMessage& message)
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228 {
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229 EmitMessage(SliceGeometryErrorMessage(*this));
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230 state_ = State_Error;
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231 }
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232
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233 void OrthancSlicesLoader::OnSliceImageError(const OrthancApiClient::HttpErrorMessage& message)
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234 {
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235 NotifySliceImageError(dynamic_cast<const Operation&>(*(message.Payload)));
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236 state_ = State_Error;
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237 }
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238
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239 void OrthancSlicesLoader::ParseSeriesGeometry(const OrthancApiClient::JsonResponseReadyMessage& message)
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240 {
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241 Json::Value series = message.Response;
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242 Json::Value::Members instances = series.getMemberNames();
252
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243
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244 slices_.Reserve(instances.size());
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245
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246 for (size_t i = 0; i < instances.size(); i++)
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247 {
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248 OrthancPlugins::FullOrthancDataset dataset(series[instances[i]]);
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249
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250 Orthanc::DicomMap dicom;
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251 MessagingToolbox::ConvertDataset(dicom, dataset);
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252
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253 unsigned int frames;
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254 if (!dicom.ParseUnsignedInteger32(frames, Orthanc::DICOM_TAG_NUMBER_OF_FRAMES))
117
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255 {
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256 frames = 1;
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257 }
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258
117
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259 for (unsigned int frame = 0; frame < frames; frame++)
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260 {
119
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261 std::auto_ptr<Slice> slice(new Slice);
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262 if (slice->ParseOrthancFrame(dicom, instances[i], frame))
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263 {
119
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264 slices_.AddSlice(slice.release());
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265 }
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266 else
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267 {
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268 LOG(WARNING) << "Skipping invalid frame " << frame << " within instance " << instances[i];
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269 }
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270 }
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271 }
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272
120
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273 SortAndFinalizeSlices();
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274 }
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275
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276 void OrthancSlicesLoader::ParseInstanceGeometry(const OrthancApiClient::JsonResponseReadyMessage& message)
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277 {
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278 Json::Value tags = message.Response;
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279 const std::string& instanceId = dynamic_cast<OrthancSlicesLoader::Operation*>(message.Payload)->GetInstanceId();
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280
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281 OrthancPlugins::FullOrthancDataset dataset(tags);
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282
118
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283 Orthanc::DicomMap dicom;
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284 MessagingToolbox::ConvertDataset(dicom, dataset);
252
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285
117
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286 unsigned int frames;
118
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287 if (!dicom.ParseUnsignedInteger32(frames, Orthanc::DICOM_TAG_NUMBER_OF_FRAMES))
117
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288 {
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289 frames = 1;
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290 }
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291
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292 LOG(INFO) << "Instance " << instanceId << " contains " << frames << " frame(s)";
252
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293
117
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294 for (unsigned int frame = 0; frame < frames; frame++)
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295 {
119
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296 std::auto_ptr<Slice> slice(new Slice);
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297 if (slice->ParseOrthancFrame(dicom, instanceId, frame))
117
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298 {
119
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299 slices_.AddSlice(slice.release());
117
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300 }
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301 else
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302 {
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303 LOG(WARNING) << "Skipping invalid multi-frame instance " << instanceId;
299
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304 EmitMessage(SliceGeometryErrorMessage(*this));
117
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305 return;
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306 }
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307 }
252
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308
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diff changeset
309 SortAndFinalizeSlices();
117
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310 }
252
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311
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312
300
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313 void OrthancSlicesLoader::ParseFrameGeometry(const OrthancApiClient::JsonResponseReadyMessage& message)
117
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314 {
300
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315 Json::Value tags = message.Response;
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316 const std::string& instanceId = dynamic_cast<OrthancSlicesLoader::Operation*>(message.Payload)->GetInstanceId();
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317 unsigned int frame = dynamic_cast<OrthancSlicesLoader::Operation*>(message.Payload)->GetFrame();
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318
117
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319 OrthancPlugins::FullOrthancDataset dataset(tags);
252
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320
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321 state_ = State_GeometryReady;
252
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322
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323 Orthanc::DicomMap dicom;
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324 MessagingToolbox::ConvertDataset(dicom, dataset);
252
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325
119
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326 std::auto_ptr<Slice> slice(new Slice);
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327 if (slice->ParseOrthancFrame(dicom, instanceId, frame))
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328 {
266
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329 LOG(INFO) << "Loaded instance geometry " << instanceId;
119
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330 slices_.AddSlice(slice.release());
300
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331 EmitMessage(SliceGeometryReadyMessage(*this));
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332 }
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333 else
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334 {
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335 LOG(WARNING) << "Skipping invalid instance " << instanceId;
299
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336 EmitMessage(SliceGeometryErrorMessage(*this));
73
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337 }
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338 }
252
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339
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340
300
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341 void OrthancSlicesLoader::ParseSliceImagePng(const OrthancApiClient::BinaryResponseReadyMessage& message)
73
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342 {
300
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343 const Operation& operation = dynamic_cast<const OrthancSlicesLoader::Operation&>(*message.Payload);
99
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344 std::auto_ptr<Orthanc::ImageAccessor> image;
252
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345
93
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diff changeset
346 try
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347 {
99
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diff changeset
348 image.reset(new Orthanc::PngReader);
300
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349 dynamic_cast<Orthanc::PngReader&>(*image).ReadFromMemory(message.Answer, message.AnswerSize);
93
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350 }
5945e81734a3 decoding of JPEG images
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diff changeset
351 catch (Orthanc::OrthancException&)
5945e81734a3 decoding of JPEG images
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352 {
5945e81734a3 decoding of JPEG images
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diff changeset
353 NotifySliceImageError(operation);
5945e81734a3 decoding of JPEG images
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354 return;
5945e81734a3 decoding of JPEG images
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355 }
252
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356
93
5945e81734a3 decoding of JPEG images
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diff changeset
357 if (image->GetWidth() != operation.GetSlice().GetWidth() ||
5945e81734a3 decoding of JPEG images
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diff changeset
358 image->GetHeight() != operation.GetSlice().GetHeight())
5945e81734a3 decoding of JPEG images
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diff changeset
359 {
5945e81734a3 decoding of JPEG images
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diff changeset
360 NotifySliceImageError(operation);
5945e81734a3 decoding of JPEG images
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diff changeset
361 return;
5945e81734a3 decoding of JPEG images
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362 }
252
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diff changeset
363
93
5945e81734a3 decoding of JPEG images
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diff changeset
364 if (operation.GetSlice().GetConverter().GetExpectedPixelFormat() ==
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
365 Orthanc::PixelFormat_SignedGrayscale16)
ffa6dded91bd reorganization
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parents:
diff changeset
366 {
ffa6dded91bd reorganization
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diff changeset
367 if (image->GetFormat() == Orthanc::PixelFormat_Grayscale16)
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parents:
diff changeset
368 {
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369 image->SetFormat(Orthanc::PixelFormat_SignedGrayscale16);
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370 }
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parents:
diff changeset
371 else
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parents:
diff changeset
372 {
93
5945e81734a3 decoding of JPEG images
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diff changeset
373 NotifySliceImageError(operation);
5945e81734a3 decoding of JPEG images
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diff changeset
374 return;
5945e81734a3 decoding of JPEG images
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diff changeset
375 }
5945e81734a3 decoding of JPEG images
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diff changeset
376 }
252
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diff changeset
377
99
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diff changeset
378 NotifySliceImageSuccess(operation, image);
252
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diff changeset
379 }
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diff changeset
380
300
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381 void OrthancSlicesLoader::ParseSliceImagePam(const OrthancApiClient::BinaryResponseReadyMessage& message)
257
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diff changeset
382 {
300
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diff changeset
383 const Operation& operation = dynamic_cast<const OrthancSlicesLoader::Operation&>(*message.Payload);
257
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diff changeset
384 std::auto_ptr<Orthanc::ImageAccessor> image;
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diff changeset
385
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diff changeset
386 try
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diff changeset
387 {
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388 image.reset(new Orthanc::PamReader);
300
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diff changeset
389 dynamic_cast<Orthanc::PamReader&>(*image).ReadFromMemory(std::string(reinterpret_cast<const char*>(message.Answer), message.AnswerSize));
257
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diff changeset
390 }
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diff changeset
391 catch (Orthanc::OrthancException&)
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diff changeset
392 {
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diff changeset
393 NotifySliceImageError(operation);
9afafb192180 using PAM
am@osimis.io
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diff changeset
394 return;
9afafb192180 using PAM
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diff changeset
395 }
9afafb192180 using PAM
am@osimis.io
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diff changeset
396
9afafb192180 using PAM
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diff changeset
397 if (image->GetWidth() != operation.GetSlice().GetWidth() ||
9afafb192180 using PAM
am@osimis.io
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diff changeset
398 image->GetHeight() != operation.GetSlice().GetHeight())
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
399 {
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am@osimis.io
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diff changeset
400 NotifySliceImageError(operation);
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
401 return;
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
402 }
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
403
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
404 if (operation.GetSlice().GetConverter().GetExpectedPixelFormat() ==
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
405 Orthanc::PixelFormat_SignedGrayscale16)
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
406 {
9afafb192180 using PAM
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parents: 252
diff changeset
407 if (image->GetFormat() == Orthanc::PixelFormat_Grayscale16)
9afafb192180 using PAM
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parents: 252
diff changeset
408 {
9afafb192180 using PAM
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diff changeset
409 image->SetFormat(Orthanc::PixelFormat_SignedGrayscale16);
9afafb192180 using PAM
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diff changeset
410 }
9afafb192180 using PAM
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diff changeset
411 else
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
412 {
9afafb192180 using PAM
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diff changeset
413 NotifySliceImageError(operation);
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
414 return;
9afafb192180 using PAM
am@osimis.io
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diff changeset
415 }
9afafb192180 using PAM
am@osimis.io
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diff changeset
416 }
9afafb192180 using PAM
am@osimis.io
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diff changeset
417
9afafb192180 using PAM
am@osimis.io
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diff changeset
418 NotifySliceImageSuccess(operation, image);
9afafb192180 using PAM
am@osimis.io
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diff changeset
419 }
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
420
9afafb192180 using PAM
am@osimis.io
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diff changeset
421
300
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am@osimis.io
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diff changeset
422 void OrthancSlicesLoader::ParseSliceImageJpeg(const OrthancApiClient::JsonResponseReadyMessage& message)
93
5945e81734a3 decoding of JPEG images
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diff changeset
423 {
300
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diff changeset
424 const Operation& operation = dynamic_cast<const OrthancSlicesLoader::Operation&>(*message.Payload);
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diff changeset
425
b4abaeb783b1 messaging refactoring almost complete: works fine in native
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diff changeset
426 Json::Value encoded = message.Response;
b4abaeb783b1 messaging refactoring almost complete: works fine in native
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diff changeset
427 if (encoded.type() != Json::objectValue ||
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
428 !encoded.isMember("Orthanc") ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
429 encoded["Orthanc"].type() != Json::objectValue)
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
430 {
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
431 NotifySliceImageError(operation);
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
432 return;
5945e81734a3 decoding of JPEG images
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diff changeset
433 }
252
40b21c1f8b8d more usage of IObservable/IObserver
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diff changeset
434
93
5945e81734a3 decoding of JPEG images
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diff changeset
435 Json::Value& info = encoded["Orthanc"];
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
436 if (!info.isMember("PixelData") ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
437 !info.isMember("Stretched") ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
438 !info.isMember("Compression") ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
439 info["Compression"].type() != Json::stringValue ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
440 info["PixelData"].type() != Json::stringValue ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
441 info["Stretched"].type() != Json::booleanValue ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
442 info["Compression"].asString() != "Jpeg")
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
443 {
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
444 NotifySliceImageError(operation);
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
445 return;
94
Sebastien Jodogne <s.jodogne@gmail.com>
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diff changeset
446 }
252
40b21c1f8b8d more usage of IObservable/IObserver
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diff changeset
447
93
5945e81734a3 decoding of JPEG images
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diff changeset
448 bool isSigned = false;
5945e81734a3 decoding of JPEG images
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diff changeset
449 bool isStretched = info["Stretched"].asBool();
252
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diff changeset
450
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
451 if (info.isMember("IsSigned"))
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
452 {
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
453 if (info["IsSigned"].type() != Json::booleanValue)
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
454 {
94
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 93
diff changeset
455 NotifySliceImageError(operation);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 93
diff changeset
456 return;
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
457 }
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
458 else
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
459 {
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
460 isSigned = info["IsSigned"].asBool();
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
461 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
462 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
463
99
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 97
diff changeset
464 std::auto_ptr<Orthanc::ImageAccessor> reader;
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
465
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
466 {
100
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
467 std::string jpeg;
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
468 //Orthanc::Toolbox::DecodeBase64(jpeg, info["PixelData"].asString());
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
469 jpeg = base64_decode(info["PixelData"].asString());
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
470
100
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
471 try
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
472 {
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
473 reader.reset(new Orthanc::JpegReader);
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
474 dynamic_cast<Orthanc::JpegReader&>(*reader).ReadFromMemory(jpeg);
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
475 }
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
476 catch (Orthanc::OrthancException&)
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
477 {
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
478 NotifySliceImageError(operation);
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
479 return;
166a555becbf fix jpeg decoding in wasm
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 99
diff changeset
480 }
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
481 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
482
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
483 Orthanc::PixelFormat expectedFormat =
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
484 operation.GetSlice().GetConverter().GetExpectedPixelFormat();
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
485
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
486 if (reader->GetFormat() == Orthanc::PixelFormat_RGB24) // This is a color image
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
487 {
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
488 if (expectedFormat != Orthanc::PixelFormat_RGB24)
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
489 {
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
490 NotifySliceImageError(operation);
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
491 return;
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
492 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
493
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
494 if (isSigned || isStretched)
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
495 {
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
496 NotifySliceImageError(operation);
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
497 return;
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
498 }
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
499 else
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
500 {
99
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 97
diff changeset
501 NotifySliceImageSuccess(operation, reader);
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
502 return;
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
503 }
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
504 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
505
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
506 if (reader->GetFormat() != Orthanc::PixelFormat_Grayscale8)
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
507 {
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
508 NotifySliceImageError(operation);
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
509 return;
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
510 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
511
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
512 if (!isStretched)
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
513 {
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
514 if (expectedFormat != reader->GetFormat())
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
515 {
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
516 NotifySliceImageError(operation);
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
517 return;
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
518 }
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
519 else
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
520 {
99
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 97
diff changeset
521 NotifySliceImageSuccess(operation, reader);
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
522 return;
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
523 }
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
524 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
525
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
526 int32_t stretchLow = 0;
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
527 int32_t stretchHigh = 0;
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
528
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
529 if (!info.isMember("StretchLow") ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
530 !info.isMember("StretchHigh") ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
531 info["StretchLow"].type() != Json::intValue ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
532 info["StretchHigh"].type() != Json::intValue)
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
533 {
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
534 NotifySliceImageError(operation);
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
535 return;
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
536 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
537
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
538 stretchLow = info["StretchLow"].asInt();
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
539 stretchHigh = info["StretchHigh"].asInt();
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
540
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
541 if (stretchLow < -32768 ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
542 stretchHigh > 65535 ||
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
543 (stretchLow < 0 && stretchHigh > 32767))
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
544 {
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
545 // This range cannot be represented with a uint16_t or an int16_t
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
546 NotifySliceImageError(operation);
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
547 return;
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
548 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
549
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
550 // Decode a grayscale JPEG 8bpp image coming from the Web viewer
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
551 std::auto_ptr<Orthanc::ImageAccessor> image
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
552 (new Orthanc::Image(expectedFormat, reader->GetWidth(), reader->GetHeight(), false));
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
553
203
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
554 Orthanc::ImageProcessing::Convert(*image, *reader);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
555 reader.reset(NULL);
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
556
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
557 float scaling = static_cast<float>(stretchHigh - stretchLow) / 255.0f;
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
558
203
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
559 if (!LinearAlgebra::IsCloseToZero(scaling))
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
560 {
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
561 float offset = static_cast<float>(stretchLow) / scaling;
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
562 Orthanc::ImageProcessing::ShiftScale(*image, offset, scaling, true);
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 201
diff changeset
563 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
564
99
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 97
diff changeset
565 NotifySliceImageSuccess(operation, image);
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
566 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
567
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
568
119
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
569 class StringImage :
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
570 public Orthanc::ImageAccessor,
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
571 public boost::noncopyable
119
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
572 {
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
573 private:
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
574 std::string buffer_;
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
575
119
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
576 public:
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
577 StringImage(Orthanc::PixelFormat format,
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
578 unsigned int width,
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
579 unsigned int height,
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
580 std::string& buffer)
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
581 {
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
582 if (buffer.size() != Orthanc::GetBytesPerPixel(format) * width * height)
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
583 {
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
584 throw Orthanc::OrthancException(Orthanc::ErrorCode_IncompatibleImageFormat);
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
585 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
586
119
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
587 buffer_.swap(buffer); // The source buffer is now empty
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
588
119
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
589 void* data = (buffer_.empty() ? NULL : &buffer_[0]);
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
590
119
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
591 AssignWritable(format, width, height,
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
592 Orthanc::GetBytesPerPixel(format) * width, data);
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
593 }
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
594 };
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
595
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
596 void OrthancSlicesLoader::ParseSliceRawImage(const OrthancApiClient::BinaryResponseReadyMessage& message)
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
597 {
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
598 const Operation& operation = dynamic_cast<const OrthancSlicesLoader::Operation&>(*message.Payload);
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
599 Orthanc::GzipCompressor compressor;
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
600
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
601 std::string raw;
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
602 compressor.Uncompress(raw, message.Answer, message.AnswerSize);
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
603
119
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
604 const Orthanc::DicomImageInformation& info = operation.GetSlice().GetImageInformation();
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
605
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
606 if (info.GetBitsAllocated() == 32 &&
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
607 info.GetBitsStored() == 32 &&
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
608 info.GetHighBit() == 31 &&
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
609 info.GetChannelCount() == 1 &&
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
610 !info.IsSigned() &&
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
611 info.GetPhotometricInterpretation() == Orthanc::PhotometricInterpretation_Monochrome2 &&
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
612 raw.size() == info.GetWidth() * info.GetHeight() * 4)
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
613 {
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
614 // This is the case of RT-DOSE (uint32_t values)
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
615
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
616 std::auto_ptr<Orthanc::ImageAccessor> image
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
617 (new StringImage(Orthanc::PixelFormat_Grayscale32, info.GetWidth(),
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
618 info.GetHeight(), raw));
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
619
120
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
620 // TODO - Only for big endian
119
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
621 for (unsigned int y = 0; y < image->GetHeight(); y++)
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
622 {
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
623 uint32_t *p = reinterpret_cast<uint32_t*>(image->GetRow(y));
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
624 for (unsigned int x = 0; x < image->GetWidth(); x++, p++)
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
625 {
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
626 *p = le32toh(*p);
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
627 }
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
628 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
629
119
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
630 NotifySliceImageSuccess(operation, image);
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
631 }
120
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
632 else if (info.GetBitsAllocated() == 16 &&
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
633 info.GetBitsStored() == 16 &&
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
634 info.GetHighBit() == 15 &&
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
635 info.GetChannelCount() == 1 &&
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
636 !info.IsSigned() &&
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
637 info.GetPhotometricInterpretation() == Orthanc::PhotometricInterpretation_Monochrome2 &&
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
638 raw.size() == info.GetWidth() * info.GetHeight() * 2)
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
639 {
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
640 std::auto_ptr<Orthanc::ImageAccessor> image
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
641 (new StringImage(Orthanc::PixelFormat_Grayscale16, info.GetWidth(),
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
642 info.GetHeight(), raw));
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
643
120
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
644 // TODO - Big endian ?
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
645
120
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
646 NotifySliceImageSuccess(operation, image);
063f7f3d9f14 fix 3d locations of the doses
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 119
diff changeset
647 }
119
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
648 else
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
649 {
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
650 throw Orthanc::OrthancException(Orthanc::ErrorCode_NotImplemented);
ba83e38cf3ff rendering of rt-dose
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 118
diff changeset
651 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
652
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
653 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
654
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
655
251
192e6e349e69 first usage of new message system (in SDL only)
am@osimis.io
parents: 212
diff changeset
656 OrthancSlicesLoader::OrthancSlicesLoader(MessageBroker& broker,
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
657 OrthancApiClient& orthanc) :
266
c9cf95b49a86 removed OrthancSlicesLoader::ISliceLoaderObserver; now using standard messages instead
am@osimis.io
parents: 257
diff changeset
658 IObservable(broker),
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
659 IObserver(broker),
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
660 orthanc_(orthanc),
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
661 state_(State_Initialization)
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
662 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
663 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
664
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
665
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
666 void OrthancSlicesLoader::ScheduleLoadSeries(const std::string& seriesId)
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
667 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
668 if (state_ != State_Initialization)
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
669 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
670 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
671 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
672 else
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
673 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
674 state_ = State_LoadingGeometry;
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
675 orthanc_.GetJsonAsync("/series/" + seriesId + "/instances-tags",
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
676 new Callable<OrthancSlicesLoader, OrthancApiClient::JsonResponseReadyMessage>(*this, &OrthancSlicesLoader::ParseSeriesGeometry),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
677 new Callable<OrthancSlicesLoader, OrthancApiClient::HttpErrorMessage>(*this, &OrthancSlicesLoader::OnGeometryError),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
678 NULL);
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
679 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
680 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
681
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
682 void OrthancSlicesLoader::ScheduleLoadInstance(const std::string& instanceId)
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
683 {
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
684 if (state_ != State_Initialization)
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
685 {
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
686 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
687 }
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
688 else
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
689 {
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
690 state_ = State_LoadingGeometry;
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
691
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
692 // Tag "3004-000c" is "Grid Frame Offset Vector", which is
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
693 // mandatory to read RT DOSE, but is too long to be returned by default
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
694 orthanc_.GetJsonAsync("/instances/" + instanceId + "/tags?ignore-length=3004-000c",
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
695 new Callable<OrthancSlicesLoader, OrthancApiClient::JsonResponseReadyMessage>(*this, &OrthancSlicesLoader::ParseInstanceGeometry),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
696 new Callable<OrthancSlicesLoader, OrthancApiClient::HttpErrorMessage>(*this, &OrthancSlicesLoader::OnGeometryError),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
697 Operation::DownloadInstanceGeometry(instanceId));
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
698 }
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
699 }
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
700
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
701
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
702 void OrthancSlicesLoader::ScheduleLoadFrame(const std::string& instanceId,
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
703 unsigned int frame)
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
704 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
705 if (state_ != State_Initialization)
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
706 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
707 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
708 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
709 else
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
710 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
711 state_ = State_LoadingGeometry;
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
712
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
713 orthanc_.GetJsonAsync("/instances/" + instanceId + "/tags",
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
714 new Callable<OrthancSlicesLoader, OrthancApiClient::JsonResponseReadyMessage>(*this, &OrthancSlicesLoader::ParseFrameGeometry),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
715 new Callable<OrthancSlicesLoader, OrthancApiClient::HttpErrorMessage>(*this, &OrthancSlicesLoader::OnGeometryError),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
716 Operation::DownloadFrameGeometry(instanceId, frame));
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
717 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
718 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
719
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
720
77
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
721 bool OrthancSlicesLoader::IsGeometryReady() const
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
722 {
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
723 return state_ == State_GeometryReady;
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
724 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
725
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
726
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
727 size_t OrthancSlicesLoader::GetSliceCount() const
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
728 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
729 if (state_ != State_GeometryReady)
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
730 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
731 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
732 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
733
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
734 return slices_.GetSliceCount();
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
735 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
736
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
737
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
738 const Slice& OrthancSlicesLoader::GetSlice(size_t index) const
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
739 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
740 if (state_ != State_GeometryReady)
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
741 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
742 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
743 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
744
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
745 return slices_.GetSlice(index);
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
746 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
747
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
748
77
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
749 bool OrthancSlicesLoader::LookupSlice(size_t& index,
110
53025eecbc95 renamed SliceGeometry as CoordinateSystem3D
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 100
diff changeset
750 const CoordinateSystem3D& plane) const
77
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
751 {
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
752 if (state_ != State_GeometryReady)
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
753 {
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
754 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
755 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
756
77
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
757 return slices_.LookupSlice(index, plane);
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
758 }
f5f54ed8d307 refactoring
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 73
diff changeset
759
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
760
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
761 void OrthancSlicesLoader::ScheduleSliceImagePng(const Slice& slice,
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
762 size_t index)
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
763 {
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
764 std::string uri = ("/instances/" + slice.GetOrthancInstanceId() + "/frames/" +
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
765 boost::lexical_cast<std::string>(slice.GetFrame()));
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
766
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
767 switch (slice.GetConverter().GetExpectedPixelFormat())
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
768 {
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
769 case Orthanc::PixelFormat_RGB24:
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
770 uri += "/preview";
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
771 break;
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
772
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
773 case Orthanc::PixelFormat_Grayscale16:
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
774 uri += "/image-uint16";
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
775 break;
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
776
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
777 case Orthanc::PixelFormat_SignedGrayscale16:
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
778 uri += "/image-int16";
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
779 break;
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
780
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
781 default:
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
782 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
783 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
784
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
785 orthanc_.GetBinaryAsync(uri, "image/png",
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
786 new Callable<OrthancSlicesLoader, OrthancApiClient::BinaryResponseReadyMessage>(*this, &OrthancSlicesLoader::ParseSliceImagePng),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
787 new Callable<OrthancSlicesLoader, OrthancApiClient::HttpErrorMessage>(*this, &OrthancSlicesLoader::OnSliceImageError),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
788 Operation::DownloadSliceImage(index, slice, SliceImageQuality_FullPng));
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
789 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
790
257
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
791 void OrthancSlicesLoader::ScheduleSliceImagePam(const Slice& slice,
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
792 size_t index)
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
793 {
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
794 std::string uri = ("/instances/" + slice.GetOrthancInstanceId() + "/frames/" +
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
795 boost::lexical_cast<std::string>(slice.GetFrame()));
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
796
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
797 switch (slice.GetConverter().GetExpectedPixelFormat())
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
798 {
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
799 case Orthanc::PixelFormat_RGB24:
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
800 uri += "/preview";
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
801 break;
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
802
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
803 case Orthanc::PixelFormat_Grayscale16:
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
804 uri += "/image-uint16";
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
805 break;
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
806
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
807 case Orthanc::PixelFormat_SignedGrayscale16:
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
808 uri += "/image-int16";
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
809 break;
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
810
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
811 default:
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
812 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
813 }
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
814
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
815 orthanc_.GetBinaryAsync(uri, "image/x-portable-arbitrarymap",
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
816 new Callable<OrthancSlicesLoader, OrthancApiClient::BinaryResponseReadyMessage>(*this, &OrthancSlicesLoader::ParseSliceImagePam),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
817 new Callable<OrthancSlicesLoader, OrthancApiClient::HttpErrorMessage>(*this, &OrthancSlicesLoader::OnSliceImageError),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
818 Operation::DownloadSliceImage(index, slice, SliceImageQuality_FullPam));
257
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
819 }
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
820
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
821
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
822
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
823 void OrthancSlicesLoader::ScheduleSliceImageJpeg(const Slice& slice,
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
824 size_t index,
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
825 SliceImageQuality quality)
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
826 {
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
827 unsigned int value;
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
828
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
829 switch (quality)
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
830 {
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
831 case SliceImageQuality_Jpeg50:
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
832 value = 50;
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
833 break;
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
834
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
835 case SliceImageQuality_Jpeg90:
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
836 value = 90;
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
837 break;
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
838
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
839 case SliceImageQuality_Jpeg95:
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
840 value = 95;
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
841 break;
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
842
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
843 default:
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
844 throw Orthanc::OrthancException(Orthanc::ErrorCode_ParameterOutOfRange);
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
845 }
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
846
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
847 // This requires the official Web viewer plugin to be installed!
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
848 std::string uri = ("/web-viewer/instances/jpeg" +
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
849 boost::lexical_cast<std::string>(value) +
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
850 "-" + slice.GetOrthancInstanceId() + "_" +
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
851 boost::lexical_cast<std::string>(slice.GetFrame()));
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
852
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
853 orthanc_.GetJsonAsync(uri,
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
854 new Callable<OrthancSlicesLoader, OrthancApiClient::JsonResponseReadyMessage>(*this, &OrthancSlicesLoader::ParseSliceImageJpeg),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
855 new Callable<OrthancSlicesLoader, OrthancApiClient::HttpErrorMessage>(*this, &OrthancSlicesLoader::OnSliceImageError),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
856 Operation::DownloadSliceImage(index, slice, quality));
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
857 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
858
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
859
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
860
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
861 void OrthancSlicesLoader::ScheduleLoadSliceImage(size_t index,
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
862 SliceImageQuality quality)
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
863 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
864 if (state_ != State_GeometryReady)
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
865 {
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
866 throw Orthanc::OrthancException(Orthanc::ErrorCode_BadSequenceOfCalls);
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
867 }
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
868
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
869 const Slice& slice = GetSlice(index);
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
870
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
871 if (slice.HasOrthancDecoding())
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
872 {
257
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
873 switch (quality)
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
874 {
257
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
875 case SliceImageQuality_FullPng:
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
876 ScheduleSliceImagePng(slice, index);
257
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
877 break;
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
878 case SliceImageQuality_FullPam:
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
879 ScheduleSliceImagePam(slice, index);
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
880 break;
9afafb192180 using PAM
am@osimis.io
parents: 252
diff changeset
881 default:
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
882 ScheduleSliceImageJpeg(slice, index, quality);
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
883 }
93
5945e81734a3 decoding of JPEG images
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 77
diff changeset
884 }
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
885 else
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
886 {
252
40b21c1f8b8d more usage of IObservable/IObserver
am@osimis.io
parents: 251
diff changeset
887 std::string uri = ("/instances/" + slice.GetOrthancInstanceId() + "/frames/" +
117
42c05a3baee3 loading multi-frame instances as 3D volumes
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 113
diff changeset
888 boost::lexical_cast<std::string>(slice.GetFrame()) + "/raw.gz");
300
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
889 orthanc_.GetBinaryAsync(uri, IWebService::Headers(),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
890 new Callable<OrthancSlicesLoader, OrthancApiClient::BinaryResponseReadyMessage>(*this, &OrthancSlicesLoader::ParseSliceRawImage),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
891 new Callable<OrthancSlicesLoader, OrthancApiClient::HttpErrorMessage>(*this, &OrthancSlicesLoader::OnSliceImageError),
b4abaeb783b1 messaging refactoring almost complete: works fine in native
am@osimis.io
parents: 299
diff changeset
892 Operation::DownloadSliceRawImage(index, slice));
73
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
893 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
894 }
ffa6dded91bd reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
895 }