annotate OrthancStone/Sources/Volumes/DicomVolumeImage.h @ 1598:8563ea5d8ae4

relicensing some files, cf. osimis bm26 and chu agreement on 2020-05-20
author Sebastien Jodogne <s.jodogne@gmail.com>
date Mon, 26 Oct 2020 20:49:28 +0100
parents 4fb8fdf03314
children 9ac2a65d4172
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2 * Stone of Orthanc
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
4 * Department, University Hospital of Liege, Belgium
1270
2d8ab34c8c91 upgrade to year 2020
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1072
diff changeset
5 * Copyright (C) 2017-2020 Osimis S.A., Belgium
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
6 *
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 * This program is free software: you can redistribute it and/or
1598
8563ea5d8ae4 relicensing some files, cf. osimis bm26 and chu agreement on 2020-05-20
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1596
diff changeset
8 * modify it under the terms of the GNU Lesser General Public License
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 * as published by the Free Software Foundation, either version 3 of
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 * the License, or (at your option) any later version.
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
11 *
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
12 * This program is distributed in the hope that it will be useful, but
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 * WITHOUT ANY WARRANTY; without even the implied warranty of
1598
8563ea5d8ae4 relicensing some files, cf. osimis bm26 and chu agreement on 2020-05-20
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1596
diff changeset
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
8563ea5d8ae4 relicensing some files, cf. osimis bm26 and chu agreement on 2020-05-20
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1596
diff changeset
15 * Lesser General Public License for more details.
1596
4fb8fdf03314 removed annoying whitespace
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1512
diff changeset
16 *
1598
8563ea5d8ae4 relicensing some files, cf. osimis bm26 and chu agreement on 2020-05-20
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1596
diff changeset
17 * You should have received a copy of the GNU Lesser General Public
8563ea5d8ae4 relicensing some files, cf. osimis bm26 and chu agreement on 2020-05-20
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1596
diff changeset
18 * License along with this program. If not, see
8563ea5d8ae4 relicensing some files, cf. osimis bm26 and chu agreement on 2020-05-20
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1596
diff changeset
19 * <http://www.gnu.org/licenses/>.
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
20 **/
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23 #pragma once
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25 #include "../Messages/IMessage.h"
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
26 #include "../Toolbox/DicomInstanceParameters.h"
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
27 #include "ImageBuffer3D.h"
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 #include "VolumeImageGeometry.h"
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
30 namespace OrthancStone
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32 /**
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
33 This class combines a 3D image buffer, a 3D volume geometry and
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34 information about the DICOM parameters of the series.
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35 (MPR means MultiPlanar Reconstruction)
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36 */
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
37 class DicomVolumeImage : public boost::noncopyable
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
38 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
39 public:
1157
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1156
diff changeset
40 // TODO - Are these messages still useful?
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
41 ORTHANC_STONE_DEFINE_ORIGIN_MESSAGE(__FILE__, __LINE__, GeometryReadyMessage, DicomVolumeImage);
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
42 ORTHANC_STONE_DEFINE_ORIGIN_MESSAGE(__FILE__, __LINE__, ContentUpdatedMessage, DicomVolumeImage);
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
43
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
44 private:
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
45 uint64_t revision_;
1298
8a0a62189f46 replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1270
diff changeset
46 std::unique_ptr<VolumeImageGeometry> geometry_;
8a0a62189f46 replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1270
diff changeset
47 std::unique_ptr<ImageBuffer3D> image_;
8a0a62189f46 replacing std::auto_ptr by std::unique_ptr
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1270
diff changeset
48 std::unique_ptr<DicomInstanceParameters> parameters_;
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
49
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
50 void CheckHasGeometry() const;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
51
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
52 public:
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
53 DicomVolumeImage() :
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
54 revision_(0)
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
55 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
56 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
57
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
58 void IncrementRevision()
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
59 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
60 revision_ ++;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
61 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
62
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
63 void Initialize(const VolumeImageGeometry& geometry,
1157
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1156
diff changeset
64 Orthanc::PixelFormat format,
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1156
diff changeset
65 bool computeRange = false);
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
66
1157
Sebastien Jodogne <s.jodogne@gmail.com>
parents: 1156
diff changeset
67 // Used by volume slicers
814
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
68 void SetDicomParameters(const DicomInstanceParameters& parameters);
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
69
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
70 uint64_t GetRevision() const
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
71 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
72 return revision_;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
73 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
74
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
75 bool HasGeometry() const;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
76
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
77 ImageBuffer3D& GetPixelData();
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
78
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
79 const ImageBuffer3D& GetPixelData() const;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
80
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
81 const VolumeImageGeometry& GetGeometry() const;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
82
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
83 bool HasDicomParameters() const
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
84 {
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
85 return parameters_.get() != NULL;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
86 }
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
87
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
88 const DicomInstanceParameters& GetDicomParameters() const;
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
89 };
aead999345e0 reorganization
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
90 }