annotate Framework/Toolbox/VolumeImageGeometry.h @ 684:7719eb852dd5

new class: VolumeImageGeometry
author Sebastien Jodogne <s.jodogne@gmail.com>
date Thu, 16 May 2019 16:47:46 +0200
parents
children 93a8949a1ef7
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
684
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
1 /**
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
2 * Stone of Orthanc
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
3 * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
4 * Department, University Hospital of Liege, Belgium
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
5 * Copyright (C) 2017-2019 Osimis S.A., Belgium
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
6 *
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
7 * This program is free software: you can redistribute it and/or
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
8 * modify it under the terms of the GNU Affero General Public License
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
9 * as published by the Free Software Foundation, either version 3 of
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
10 * the License, or (at your option) any later version.
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
11 *
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
12 * This program is distributed in the hope that it will be useful, but
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
13 * WITHOUT ANY WARRANTY; without even the implied warranty of
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
14 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
15 * Affero General Public License for more details.
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
16 *
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
17 * You should have received a copy of the GNU Affero General Public License
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
18 * along with this program. If not, see <http://www.gnu.org/licenses/>.
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
19 **/
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
20
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
21
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
22 #pragma once
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
23
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
24 #include "../StoneEnumerations.h"
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
25 #include "CoordinateSystem3D.h"
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
26
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
27 namespace OrthancStone
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
28 {
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
29 class VolumeImageGeometry
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
30 {
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
31 private:
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
32 unsigned int width_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
33 unsigned int height_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
34 unsigned int depth_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
35 CoordinateSystem3D axialGeometry_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
36 CoordinateSystem3D coronalGeometry_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
37 CoordinateSystem3D sagittalGeometry_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
38 Vector voxelDimensions_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
39 Matrix transform_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
40 Matrix transformInverse_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
41
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
42 void Invalidate();
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
43
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
44 public:
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
45 VolumeImageGeometry();
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
46
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
47 unsigned int GetWidth() const
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
48 {
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
49 return width_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
50 }
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
51
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
52 unsigned int GetHeight() const
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
53 {
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
54 return height_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
55 }
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
56
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
57 unsigned int GetDepth() const
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
58 {
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
59 return depth_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
60 }
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
61
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
62 const CoordinateSystem3D& GetAxialGeometry() const
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
63 {
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
64 return axialGeometry_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
65 }
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
66
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
67 const CoordinateSystem3D& GetCoronalGeometry() const
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
68 {
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
69 return coronalGeometry_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
70 }
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
71
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
72 const CoordinateSystem3D& GetSagittalGeometry() const
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
73 {
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
74 return sagittalGeometry_;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
75 }
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
76
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
77 void SetSize(unsigned int width,
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
78 unsigned int height,
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
79 unsigned int depth);
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
80
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
81 // Set the geometry of the first axial slice (i.e. the one whose
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
82 // depth == 0)
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
83 void SetAxialGeometry(const CoordinateSystem3D& geometry);
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
84
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
85 void SetVoxelDimensions(double x,
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
86 double y,
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
87 double z);
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
88
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
89 Vector GetVoxelDimensions(VolumeProjection projection) const;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
90
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
91 void GetSliceSize(unsigned int& width,
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
92 unsigned int& height,
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
93 VolumeProjection projection);
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
94
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
95 // Get the 3D position of a point in the volume, where x, y and z
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
96 // lie in the [0;1] range
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
97 Vector GetCoordinates(float x,
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
98 float y,
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
99 float z) const;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
100
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
101 bool DetectProjection(VolumeProjection& projection,
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
102 const CoordinateSystem3D& plane) const;
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
103 };
7719eb852dd5 new class: VolumeImageGeometry
Sebastien Jodogne <s.jodogne@gmail.com>
parents:
diff changeset
104 }