Mercurial > hg > orthanc-neuro
changeset 14:a86bc8c0058d
sync
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line diff
--- a/CMakeLists.txt Mon Aug 14 10:27:52 2023 +0200 +++ b/CMakeLists.txt Tue Nov 14 09:34:30 2023 +0100 @@ -175,6 +175,8 @@ ${CMAKE_SOURCE_DIR}/Resources/Orthanc/Plugins/OrthancPluginCppWrapper.cpp ) +DefineSourceBasenameForTarget(OrthancNeuro) + add_dependencies(OrthancNeuro AutogeneratedTarget) add_executable(UnitTests @@ -185,6 +187,8 @@ ${GOOGLE_TEST_SOURCES} ) +DefineSourceBasenameForTarget(UnitTests) + add_dependencies(UnitTests AutogeneratedTarget) target_link_libraries(UnitTests ${GOOGLE_TEST_LIBRARIES})
--- a/Resources/Orthanc/CMake/AutoGeneratedCode.cmake Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/CMake/AutoGeneratedCode.cmake Tue Nov 14 09:34:30 2023 +0100 @@ -1,8 +1,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License
--- a/Resources/Orthanc/CMake/Compiler.cmake Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/CMake/Compiler.cmake Tue Nov 14 09:34:30 2023 +0100 @@ -1,8 +1,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License @@ -237,7 +237,8 @@ if (DEFINED ENABLE_PROFILING AND ENABLE_PROFILING) - if (CMAKE_COMPILER_IS_GNUCXX) + if (CMAKE_COMPILER_IS_GNUCXX OR + CMAKE_CXX_COMPILER_ID STREQUAL "Clang") set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -pg") set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} -pg") set(CMAKE_EXE_LINKER_FLAGS "${CMAKE_EXE_LINKER_FLAGS} -pg") @@ -262,3 +263,24 @@ # preceding batches. https://cmake.org/Bug/view.php?id=14874 set(CMAKE_CXX_ARCHIVE_APPEND "<CMAKE_AR> <LINK_FLAGS> q <TARGET> <OBJECTS>") endif() + + +# This function defines macro "__ORTHANC_FILE__" as a replacement to +# macro "__FILE__", as the latter leaks the full path of the source +# files in the binaries +# https://stackoverflow.com/questions/8487986/file-macro-shows-full-path +# https://twitter.com/wget42/status/1676877802375634944?s=20 +function(DefineSourceBasenameForTarget targetname) + # Microsoft Visual Studio is extremely slow if using + # "set_property()", we only enable this feature for gcc and clang + if (CMAKE_COMPILER_IS_GNUCXX OR + CMAKE_CXX_COMPILER_ID STREQUAL "Clang") + get_target_property(source_files "${targetname}" SOURCES) + foreach(sourcefile ${source_files}) + get_filename_component(basename "${sourcefile}" NAME) + set_property( + SOURCE "${sourcefile}" APPEND + PROPERTY COMPILE_DEFINITIONS "__ORTHANC_FILE__=\"${basename}\"") + endforeach() + endif() +endfunction()
--- a/Resources/Orthanc/CMake/DownloadOrthancFramework.cmake Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/CMake/DownloadOrthancFramework.cmake Tue Nov 14 09:34:30 2023 +0100 @@ -1,8 +1,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License @@ -146,6 +146,18 @@ set(ORTHANC_FRAMEWORK_MD5 "8610c82d9153f22e929f2110f8f60279") elseif (ORTHANC_FRAMEWORK_VERSION STREQUAL "1.10.1") set(ORTHANC_FRAMEWORK_MD5 "caf667fc5ea452b3d0c2f70bfd02599c") + elseif (ORTHANC_FRAMEWORK_VERSION STREQUAL "1.11.0") + set(ORTHANC_FRAMEWORK_MD5 "962c4a4a706a2ef28b390d8515dd7091") + elseif (ORTHANC_FRAMEWORK_VERSION STREQUAL "1.11.1") + set(ORTHANC_FRAMEWORK_MD5 "a39661c406adf22cf574fde290cf4bbf") + elseif (ORTHANC_FRAMEWORK_VERSION STREQUAL "1.11.2") + set(ORTHANC_FRAMEWORK_MD5 "ede3de356493a8868545f8cb4b8bc8b5") + elseif (ORTHANC_FRAMEWORK_VERSION STREQUAL "1.11.3") + set(ORTHANC_FRAMEWORK_MD5 "f941c0f5771db7616e7b7961026a60e2") + elseif (ORTHANC_FRAMEWORK_VERSION STREQUAL "1.12.0") + set(ORTHANC_FRAMEWORK_MD5 "d32a0cde03b6eb603d8dd2b33d38bf1b") + elseif (ORTHANC_FRAMEWORK_VERSION STREQUAL "1.12.1") + set(ORTHANC_FRAMEWORK_MD5 "8a435140efc8ff4a01d8242f092f21de") # Below this point are development snapshots that were used to # release some plugin, before an official release of the Orthanc @@ -169,6 +181,9 @@ elseif (ORTHANC_FRAMEWORK_VERSION STREQUAL "b2e08d83e21d") # WSI 1.1 (framework pre-1.10.0), to remove "-std=c++11" set(ORTHANC_FRAMEWORK_MD5 "2eaa073cbb4b44ffba199ad93393b2b1") + elseif (ORTHANC_FRAMEWORK_VERSION STREQUAL "daf4807631c5") + # DICOMweb 1.15 (framework pre-1.12.2) + set(ORTHANC_FRAMEWORK_MD5 "c644aff2817306b3207c98c92e43f35f") endif() endif() endif() @@ -256,7 +271,7 @@ else() message("Forking the Orthanc source repository using Mercurial") execute_process( - COMMAND ${ORTHANC_FRAMEWORK_HG} clone "https://hg.orthanc-server.com/orthanc/" + COMMAND ${ORTHANC_FRAMEWORK_HG} clone "https://orthanc.uclouvain.be/hg/orthanc/" WORKING_DIRECTORY ${CMAKE_BINARY_DIR} RESULT_VARIABLE Failure ) @@ -305,7 +320,7 @@ else() # Default case: Download from the official Web site set(ORTHANC_FRAMEMORK_FILENAME Orthanc-${ORTHANC_FRAMEWORK_VERSION}.tar.gz) - set(ORTHANC_FRAMEWORK_URL "http://orthanc.osimis.io/ThirdPartyDownloads/orthanc-framework/${ORTHANC_FRAMEMORK_FILENAME}") + set(ORTHANC_FRAMEWORK_URL "https://orthanc.uclouvain.be/third-party-downloads/orthanc-framework/${ORTHANC_FRAMEMORK_FILENAME}") endif() set(ORTHANC_FRAMEWORK_ARCHIVE "${CMAKE_SOURCE_DIR}/ThirdPartyDownloads/${ORTHANC_FRAMEMORK_FILENAME}")
--- a/Resources/Orthanc/CMake/DownloadPackage.cmake Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/CMake/DownloadPackage.cmake Tue Nov 14 09:34:30 2023 +0100 @@ -1,8 +1,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License @@ -101,19 +101,26 @@ message(FATAL_ERROR "CMake is not allowed to download from Internet. Please set the ALLOW_DOWNLOADS option to ON") endif() - if ("${MD5}" STREQUAL "no-check") - message(WARNING "Not checking the MD5 of: ${Url}") - file(DOWNLOAD "${Url}" "${TMP_PATH}" - SHOW_PROGRESS TIMEOUT 300 INACTIVITY_TIMEOUT 60 - STATUS Failure) - else() - file(DOWNLOAD "${Url}" "${TMP_PATH}" - SHOW_PROGRESS TIMEOUT 300 INACTIVITY_TIMEOUT 60 - EXPECTED_MD5 "${MD5}" STATUS Failure) - endif() + foreach (retry RANGE 1 5) # Retries 5 times + if ("${MD5}" STREQUAL "no-check") + message(WARNING "Not checking the MD5 of: ${Url}") + file(DOWNLOAD "${Url}" "${TMP_PATH}" + SHOW_PROGRESS TIMEOUT 30 INACTIVITY_TIMEOUT 10 + STATUS Failure) + else() + file(DOWNLOAD "${Url}" "${TMP_PATH}" + SHOW_PROGRESS TIMEOUT 30 INACTIVITY_TIMEOUT 10 + EXPECTED_MD5 "${MD5}" STATUS Failure) + endif() - list(GET Failure 0 Status) + list(GET Failure 0 Status) + if (Status EQUAL 0) + break() # Successful download + endif() + endforeach() + if (NOT Status EQUAL 0) + file(REMOVE ${TMP_PATH}) message(FATAL_ERROR "Cannot download file: ${Url}") endif()
--- a/Resources/Orthanc/CMake/EmbedResources.py Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/CMake/EmbedResources.py Tue Nov 14 09:34:30 2023 +0100 @@ -3,8 +3,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License
--- a/Resources/Orthanc/CMake/GoogleTestConfiguration.cmake Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/CMake/GoogleTestConfiguration.cmake Tue Nov 14 09:34:30 2023 +0100 @@ -1,8 +1,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License @@ -50,7 +50,7 @@ elseif (STATIC_BUILD OR NOT USE_SYSTEM_GOOGLE_TEST) set(GOOGLE_TEST_SOURCES_DIR ${CMAKE_BINARY_DIR}/googletest-release-1.8.1) - set(GOOGLE_TEST_URL "http://orthanc.osimis.io/ThirdPartyDownloads/gtest-1.8.1.tar.gz") + set(GOOGLE_TEST_URL "https://orthanc.uclouvain.be/third-party-downloads/gtest-1.8.1.tar.gz") set(GOOGLE_TEST_MD5 "2e6fbeb6a91310a16efe181886c59596") DownloadPackage(${GOOGLE_TEST_MD5} ${GOOGLE_TEST_URL} "${GOOGLE_TEST_SOURCES_DIR}")
--- a/Resources/Orthanc/CMake/WindowsResources.py Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/CMake/WindowsResources.py Tue Nov 14 09:34:30 2023 +0100 @@ -3,8 +3,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License
--- a/Resources/Orthanc/Plugins/OrthancPluginCppWrapper.cpp Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/Plugins/OrthancPluginCppWrapper.cpp Tue Nov 14 09:34:30 2023 +0100 @@ -2,8 +2,8 @@ * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium - * Copyright (C) 2017-2022 Osimis S.A., Belgium - * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium + * Copyright (C) 2017-2023 Osimis S.A., Belgium + * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License as @@ -79,6 +79,10 @@ } } + void ResetGlobalContext() + { + globalContext_ = NULL; + } bool HasGlobalContext() { @@ -250,26 +254,53 @@ } } + // helper class to convert std::map of headers to the plugin SDK C structure + class PluginHttpHeaders + { + private: + std::vector<const char*> headersKeys_; + std::vector<const char*> headersValues_; + + public: + explicit PluginHttpHeaders(const std::map<std::string, std::string>& httpHeaders) + { + for (std::map<std::string, std::string>::const_iterator + it = httpHeaders.begin(); it != httpHeaders.end(); ++it) + { + headersKeys_.push_back(it->first.c_str()); + headersValues_.push_back(it->second.c_str()); + } + } + + const char* const* GetKeys() + { + return (headersKeys_.empty() ? NULL : &headersKeys_[0]); + } + + const char* const* GetValues() + { + return (headersValues_.empty() ? NULL : &headersValues_[0]); + } + + uint32_t GetSize() + { + return static_cast<uint32_t>(headersKeys_.size()); + } + }; + bool MemoryBuffer::RestApiGet(const std::string& uri, const std::map<std::string, std::string>& httpHeaders, bool applyPlugins) { Clear(); - std::vector<const char*> headersKeys; - std::vector<const char*> headersValues; - - for (std::map<std::string, std::string>::const_iterator - it = httpHeaders.begin(); it != httpHeaders.end(); it++) - { - headersKeys.push_back(it->first.c_str()); - headersValues.push_back(it->second.c_str()); - } + PluginHttpHeaders headers(httpHeaders); return CheckHttp(OrthancPluginRestApiGet2( - GetGlobalContext(), &buffer_, uri.c_str(), httpHeaders.size(), - (headersKeys.empty() ? NULL : &headersKeys[0]), - (headersValues.empty() ? NULL : &headersValues[0]), applyPlugins)); + GetGlobalContext(), &buffer_, uri.c_str(), + headers.GetSize(), + headers.GetKeys(), + headers.GetValues(), applyPlugins)); } bool MemoryBuffer::RestApiPost(const std::string& uri, @@ -292,6 +323,41 @@ } } +#if HAS_ORTHANC_PLUGIN_GENERIC_CALL_REST_API == 1 + + bool MemoryBuffer::RestApiPost(const std::string& uri, + const void* body, + size_t bodySize, + const std::map<std::string, std::string>& httpHeaders, + bool applyPlugins) + { + MemoryBuffer answerHeaders; + uint16_t httpStatus; + + PluginHttpHeaders headers(httpHeaders); + + return CheckHttp(OrthancPluginCallRestApi(GetGlobalContext(), + &buffer_, + *answerHeaders, + &httpStatus, + OrthancPluginHttpMethod_Post, + uri.c_str(), + headers.GetSize(), headers.GetKeys(), headers.GetValues(), + body, bodySize, + applyPlugins)); + } + + + bool MemoryBuffer::RestApiPost(const std::string& uri, + const Json::Value& body, + const std::map<std::string, std::string>& httpHeaders, + bool applyPlugins) + { + std::string s; + WriteFastJson(s, body); + return RestApiPost(uri, s.c_str(), s.size(), httpHeaders, applyPlugins); + } +#endif bool MemoryBuffer::RestApiPut(const std::string& uri, const void* body, @@ -689,6 +755,12 @@ } } + OrthancConfiguration::OrthancConfiguration(const Json::Value& configuration, const std::string& path) : + configuration_(configuration), + path_(path) + { + } + std::string OrthancConfiguration::GetPath(const std::string& key) const { @@ -1044,7 +1116,7 @@ if (configuration_[key].type() != Json::objectValue) { LogError("The configuration option \"" + GetPath(key) + - "\" is not a string as expected"); + "\" is not an object as expected"); ORTHANC_PLUGINS_THROW_EXCEPTION(BadFileFormat); } @@ -1390,6 +1462,27 @@ } + bool RestApiGet(Json::Value& result, + const std::string& uri, + const std::map<std::string, std::string>& httpHeaders, + bool applyPlugins) + { + MemoryBuffer answer; + + if (!answer.RestApiGet(uri, httpHeaders, applyPlugins)) + { + return false; + } + else + { + if (!answer.IsEmpty()) + { + answer.ToJson(result); + } + return true; + } + } + bool RestApiGet(Json::Value& result, const std::string& uri, @@ -1457,6 +1550,30 @@ } } +#if HAS_ORTHANC_PLUGIN_GENERIC_CALL_REST_API == 1 + bool RestApiPost(Json::Value& result, + const std::string& uri, + const Json::Value& body, + const std::map<std::string, std::string>& httpHeaders, + bool applyPlugins) + { + MemoryBuffer answer; + + if (!answer.RestApiPost(uri, body, httpHeaders, applyPlugins)) + { + return false; + } + else + { + if (!answer.IsEmpty()) + { + answer.ToJson(result); + } + return true; + } + } +#endif + bool RestApiPost(Json::Value& result, const std::string& uri, @@ -1557,15 +1674,16 @@ return true; } +#ifdef _MSC_VER +#define ORTHANC_SCANF sscanf_s +#else +#define ORTHANC_SCANF sscanf +#endif + // Parse the version - int aa, bb, cc; - if ( -#ifdef _MSC_VER - sscanf_s -#else - sscanf -#endif - (version, "%4d.%4d.%4d", &aa, &bb, &cc) != 3 || + int aa, bb, cc = 0; + if ((ORTHANC_SCANF(version, "%4d.%4d.%4d", &aa, &bb, &cc) != 3 && + ORTHANC_SCANF(version, "%4d.%4d", &aa, &bb) != 2) || aa < 0 || bb < 0 || cc < 0) @@ -1800,7 +1918,8 @@ bool OrthancPeers::DoGet(MemoryBuffer& target, size_t index, - const std::string& uri) const + const std::string& uri, + const std::map<std::string, std::string>& headers) const { if (index >= index_.size()) { @@ -1809,10 +1928,12 @@ OrthancPlugins::MemoryBuffer answer; uint16_t status; + PluginHttpHeaders pluginHeaders(headers); + OrthancPluginErrorCode code = OrthancPluginCallPeerApi (GetGlobalContext(), *answer, NULL, &status, peers_, static_cast<uint32_t>(index), OrthancPluginHttpMethod_Get, uri.c_str(), - 0, NULL, NULL, NULL, 0, timeout_); + pluginHeaders.GetSize(), pluginHeaders.GetKeys(), pluginHeaders.GetValues(), NULL, 0, timeout_); if (code == OrthancPluginErrorCode_Success) { @@ -1828,21 +1949,23 @@ bool OrthancPeers::DoGet(MemoryBuffer& target, const std::string& name, - const std::string& uri) const + const std::string& uri, + const std::map<std::string, std::string>& headers) const { size_t index; return (LookupName(index, name) && - DoGet(target, index, uri)); + DoGet(target, index, uri, headers)); } bool OrthancPeers::DoGet(Json::Value& target, size_t index, - const std::string& uri) const + const std::string& uri, + const std::map<std::string, std::string>& headers) const { MemoryBuffer buffer; - if (DoGet(buffer, index, uri)) + if (DoGet(buffer, index, uri, headers)) { buffer.ToJson(target); return true; @@ -1856,11 +1979,12 @@ bool OrthancPeers::DoGet(Json::Value& target, const std::string& name, - const std::string& uri) const + const std::string& uri, + const std::map<std::string, std::string>& headers) const { MemoryBuffer buffer; - if (DoGet(buffer, name, uri)) + if (DoGet(buffer, name, uri, headers)) { buffer.ToJson(target); return true; @@ -1875,22 +1999,24 @@ bool OrthancPeers::DoPost(MemoryBuffer& target, const std::string& name, const std::string& uri, - const std::string& body) const + const std::string& body, + const std::map<std::string, std::string>& headers) const { size_t index; return (LookupName(index, name) && - DoPost(target, index, uri, body)); + DoPost(target, index, uri, body, headers)); } bool OrthancPeers::DoPost(Json::Value& target, size_t index, const std::string& uri, - const std::string& body) const + const std::string& body, + const std::map<std::string, std::string>& headers) const { MemoryBuffer buffer; - if (DoPost(buffer, index, uri, body)) + if (DoPost(buffer, index, uri, body, headers)) { buffer.ToJson(target); return true; @@ -1905,11 +2031,12 @@ bool OrthancPeers::DoPost(Json::Value& target, const std::string& name, const std::string& uri, - const std::string& body) const + const std::string& body, + const std::map<std::string, std::string>& headers) const { MemoryBuffer buffer; - if (DoPost(buffer, name, uri, body)) + if (DoPost(buffer, name, uri, body, headers)) { buffer.ToJson(target); return true; @@ -1924,7 +2051,8 @@ bool OrthancPeers::DoPost(MemoryBuffer& target, size_t index, const std::string& uri, - const std::string& body) const + const std::string& body, + const std::map<std::string, std::string>& headers) const { if (index >= index_.size()) { @@ -1939,10 +2067,12 @@ OrthancPlugins::MemoryBuffer answer; uint16_t status; + PluginHttpHeaders pluginHeaders(headers); + OrthancPluginErrorCode code = OrthancPluginCallPeerApi (GetGlobalContext(), *answer, NULL, &status, peers_, static_cast<uint32_t>(index), OrthancPluginHttpMethod_Post, uri.c_str(), - 0, NULL, NULL, body.empty() ? NULL : body.c_str(), body.size(), timeout_); + pluginHeaders.GetSize(), pluginHeaders.GetKeys(), pluginHeaders.GetValues(), body.empty() ? NULL : body.c_str(), body.size(), timeout_); if (code == OrthancPluginErrorCode_Success) { @@ -1958,7 +2088,8 @@ bool OrthancPeers::DoPut(size_t index, const std::string& uri, - const std::string& body) const + const std::string& body, + const std::map<std::string, std::string>& headers) const { if (index >= index_.size()) { @@ -1973,10 +2104,12 @@ OrthancPlugins::MemoryBuffer answer; uint16_t status; + PluginHttpHeaders pluginHeaders(headers); + OrthancPluginErrorCode code = OrthancPluginCallPeerApi (GetGlobalContext(), *answer, NULL, &status, peers_, static_cast<uint32_t>(index), OrthancPluginHttpMethod_Put, uri.c_str(), - 0, NULL, NULL, body.empty() ? NULL : body.c_str(), body.size(), timeout_); + pluginHeaders.GetSize(), pluginHeaders.GetKeys(), pluginHeaders.GetValues(), body.empty() ? NULL : body.c_str(), body.size(), timeout_); if (code == OrthancPluginErrorCode_Success) { @@ -1991,16 +2124,18 @@ bool OrthancPeers::DoPut(const std::string& name, const std::string& uri, - const std::string& body) const + const std::string& body, + const std::map<std::string, std::string>& headers) const { size_t index; return (LookupName(index, name) && - DoPut(index, uri, body)); + DoPut(index, uri, body, headers)); } bool OrthancPeers::DoDelete(size_t index, - const std::string& uri) const + const std::string& uri, + const std::map<std::string, std::string>& headers) const { if (index >= index_.size()) { @@ -2009,10 +2144,12 @@ OrthancPlugins::MemoryBuffer answer; uint16_t status; + PluginHttpHeaders pluginHeaders(headers); + OrthancPluginErrorCode code = OrthancPluginCallPeerApi (GetGlobalContext(), *answer, NULL, &status, peers_, static_cast<uint32_t>(index), OrthancPluginHttpMethod_Delete, uri.c_str(), - 0, NULL, NULL, NULL, 0, timeout_); + pluginHeaders.GetSize(), pluginHeaders.GetKeys(), pluginHeaders.GetValues(), NULL, 0, timeout_); if (code == OrthancPluginErrorCode_Success) { @@ -2026,11 +2163,12 @@ bool OrthancPeers::DoDelete(const std::string& name, - const std::string& uri) const + const std::string& uri, + const std::map<std::string, std::string>& headers) const { size_t index; return (LookupName(index, name) && - DoDelete(index, uri)); + DoDelete(index, uri, headers)); } #endif @@ -2067,6 +2205,36 @@ } +#if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 11, 3) + static OrthancPluginErrorCode CopyStringToMemoryBuffer(OrthancPluginMemoryBuffer* target, + const std::string& source) + { + if (OrthancPluginCreateMemoryBuffer(globalContext_, target, source.size()) != OrthancPluginErrorCode_Success) + { + return OrthancPluginErrorCode_NotEnoughMemory; + } + else + { + if (!source.empty()) + { + memcpy(target->data, source.c_str(), source.size()); + } + + return OrthancPluginErrorCode_Success; + } + } +#endif + + +#if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 11, 3) + OrthancPluginErrorCode OrthancJob::CallbackGetContent(OrthancPluginMemoryBuffer* target, + void* job) + { + assert(job != NULL); + OrthancJob& that = *reinterpret_cast<OrthancJob*>(job); + return CopyStringToMemoryBuffer(target, that.content_); + } +#else const char* OrthancJob::CallbackGetContent(void* job) { assert(job != NULL); @@ -2080,8 +2248,33 @@ return 0; } } - - +#endif + + +#if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 11, 3) + int32_t OrthancJob::CallbackGetSerialized(OrthancPluginMemoryBuffer* target, + void* job) + { + assert(job != NULL); + OrthancJob& that = *reinterpret_cast<OrthancJob*>(job); + + if (that.hasSerialized_) + { + if (CopyStringToMemoryBuffer(target, that.serialized_) == OrthancPluginErrorCode_Success) + { + return 1; + } + else + { + return -1; + } + } + else + { + return 0; + } + } +#else const char* OrthancJob::CallbackGetSerialized(void* job) { assert(job != NULL); @@ -2104,6 +2297,7 @@ return 0; } } +#endif OrthancPluginJobStepStatus OrthancJob::CallbackStep(void* job) @@ -2235,10 +2429,15 @@ ORTHANC_PLUGINS_THROW_PLUGIN_ERROR_CODE(OrthancPluginErrorCode_NullPointer); } - OrthancPluginJob* orthanc = OrthancPluginCreateJob( - GetGlobalContext(), job, CallbackFinalize, job->jobType_.c_str(), - CallbackGetProgress, CallbackGetContent, CallbackGetSerialized, - CallbackStep, CallbackStop, CallbackReset); + OrthancPluginJob* orthanc = +#if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 11, 3) + OrthancPluginCreateJob2 +#else + OrthancPluginCreateJob +#endif + (GetGlobalContext(), job, CallbackFinalize, job->jobType_.c_str(), + CallbackGetProgress, CallbackGetContent, CallbackGetSerialized, + CallbackStep, CallbackStop, CallbackReset); if (orthanc == NULL) { @@ -3558,6 +3757,27 @@ #endif +#if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 12, 1) + DicomInstance* DicomInstance::Load(const std::string& instanceId, + OrthancPluginLoadDicomInstanceMode mode) + { + OrthancPluginDicomInstance* instance = OrthancPluginLoadDicomInstance( + GetGlobalContext(), instanceId.c_str(), mode); + + if (instance == NULL) + { + ORTHANC_PLUGINS_THROW_EXCEPTION(Plugin); + } + else + { + boost::movelib::unique_ptr<DicomInstance> result(new DicomInstance(instance)); + result->toFree_ = true; + return result.release(); + } + } +#endif + + #if HAS_ORTHANC_PLUGIN_WEBDAV == 1 static std::vector<std::string> WebDavConvertPath(uint32_t pathSize, const char* const* pathItems) @@ -3796,4 +4016,14 @@ } } #endif + + void GetHttpHeaders(std::map<std::string, std::string>& result, const OrthancPluginHttpRequest* request) + { + result.clear(); + + for (uint32_t i = 0; i < request->headersCount; ++i) + { + result[request->headersKeys[i]] = request->headersValues[i]; + } + } }
--- a/Resources/Orthanc/Plugins/OrthancPluginCppWrapper.h Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/Plugins/OrthancPluginCppWrapper.h Tue Nov 14 09:34:30 2023 +0100 @@ -2,8 +2,8 @@ * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium - * Copyright (C) 2017-2022 Osimis S.A., Belgium - * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium + * Copyright (C) 2017-2023 Osimis S.A., Belgium + * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License as @@ -115,6 +115,12 @@ # define HAS_ORTHANC_PLUGIN_STORAGE_COMMITMENT_SCP 0 #endif +#if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 9, 2) +# define HAS_ORTHANC_PLUGIN_GENERIC_CALL_REST_API 1 +#else +# define HAS_ORTHANC_PLUGIN_GENERIC_CALL_REST_API 0 +#endif + #if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 10, 1) # define HAS_ORTHANC_PLUGIN_WEBDAV 1 #else @@ -131,6 +137,8 @@ void SetGlobalContext(OrthancPluginContext* context); + void ResetGlobalContext(); + bool HasGlobalContext(); OrthancPluginContext* GetGlobalContext(); @@ -224,6 +232,19 @@ const Json::Value& body, bool applyPlugins); +#if HAS_ORTHANC_PLUGIN_GENERIC_CALL_REST_API == 1 + bool RestApiPost(const std::string& uri, + const Json::Value& body, + const std::map<std::string, std::string>& httpHeaders, + bool applyPlugins); + + bool RestApiPost(const std::string& uri, + const void* body, + size_t bodySize, + const std::map<std::string, std::string>& httpHeaders, + bool applyPlugins); +#endif + bool RestApiPut(const std::string& uri, const Json::Value& body, bool applyPlugins); @@ -327,10 +348,12 @@ void LoadConfiguration(); public: - OrthancConfiguration(); + OrthancConfiguration(); // loads the full Orthanc configuration explicit OrthancConfiguration(bool load); + explicit OrthancConfiguration(const Json::Value& configuration, const std::string& path); // e.g. to load a section from a default json content + const Json::Value& GetJson() const { return configuration_; @@ -514,6 +537,11 @@ const std::string& uri, bool applyPlugins); + bool RestApiGet(Json::Value& result, + const std::string& uri, + const std::map<std::string, std::string>& httpHeaders, + bool applyPlugins); + bool RestApiGetString(std::string& result, const std::string& uri, bool applyPlugins); @@ -535,6 +563,14 @@ size_t bodySize, bool applyPlugins); +#if HAS_ORTHANC_PLUGIN_GENERIC_CALL_REST_API == 1 + bool RestApiPost(Json::Value& result, + const std::string& uri, + const Json::Value& body, + const std::map<std::string, std::string>& httpHeaders, + bool applyPlugins); +#endif + bool RestApiPost(Json::Value& result, const std::string& uri, const Json::Value& body, @@ -728,53 +764,65 @@ bool DoGet(MemoryBuffer& target, size_t index, - const std::string& uri) const; + const std::string& uri, + const std::map<std::string, std::string>& headers) const; bool DoGet(MemoryBuffer& target, const std::string& name, - const std::string& uri) const; + const std::string& uri, + const std::map<std::string, std::string>& headers) const; bool DoGet(Json::Value& target, size_t index, - const std::string& uri) const; + const std::string& uri, + const std::map<std::string, std::string>& headers) const; bool DoGet(Json::Value& target, const std::string& name, - const std::string& uri) const; + const std::string& uri, + const std::map<std::string, std::string>& headers) const; bool DoPost(MemoryBuffer& target, size_t index, const std::string& uri, - const std::string& body) const; + const std::string& body, + const std::map<std::string, std::string>& headers) const; bool DoPost(MemoryBuffer& target, const std::string& name, const std::string& uri, - const std::string& body) const; + const std::string& body, + const std::map<std::string, std::string>& headers) const; bool DoPost(Json::Value& target, size_t index, const std::string& uri, - const std::string& body) const; + const std::string& body, + const std::map<std::string, std::string>& headers) const; bool DoPost(Json::Value& target, const std::string& name, const std::string& uri, - const std::string& body) const; + const std::string& body, + const std::map<std::string, std::string>& headers) const; bool DoPut(size_t index, const std::string& uri, - const std::string& body) const; + const std::string& body, + const std::map<std::string, std::string>& headers) const; bool DoPut(const std::string& name, const std::string& uri, - const std::string& body) const; + const std::string& body, + const std::map<std::string, std::string>& headers) const; bool DoDelete(size_t index, - const std::string& uri) const; + const std::string& uri, + const std::map<std::string, std::string>& headers) const; bool DoDelete(const std::string& name, - const std::string& uri) const; + const std::string& uri, + const std::map<std::string, std::string>& headers) const; }; #endif @@ -794,9 +842,19 @@ static float CallbackGetProgress(void* job); +#if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 11, 3) + static OrthancPluginErrorCode CallbackGetContent(OrthancPluginMemoryBuffer* target, + void* job); +#else static const char* CallbackGetContent(void* job); +#endif +#if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 11, 3) + static int32_t CallbackGetSerialized(OrthancPluginMemoryBuffer* target, + void* job); +#else static const char* CallbackGetSerialized(void* job); +#endif static OrthancPluginJobStepStatus CallbackStep(void* job); @@ -1208,6 +1266,11 @@ ~DicomInstance(); + const OrthancPluginDicomInstance* GetObject() const + { + return instance_; + } + std::string GetRemoteAet() const; const void* GetBuffer() const @@ -1262,9 +1325,15 @@ size_t size, const std::string& transferSyntax); #endif + +#if ORTHANC_PLUGINS_VERSION_IS_ABOVE(1, 12, 1) + static DicomInstance* Load(const std::string& instanceId, + OrthancPluginLoadDicomInstanceMode mode); +#endif }; - +// helper method to convert Http headers from the plugin SDK to a std::map +void GetHttpHeaders(std::map<std::string, std::string>& result, const OrthancPluginHttpRequest* request); #if HAS_ORTHANC_PLUGIN_WEBDAV == 1 class IWebDavCollection : public boost::noncopyable
--- a/Resources/Orthanc/Plugins/OrthancPluginException.h Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/Plugins/OrthancPluginException.h Tue Nov 14 09:34:30 2023 +0100 @@ -2,8 +2,8 @@ * Orthanc - A Lightweight, RESTful DICOM Store * Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics * Department, University Hospital of Liege, Belgium - * Copyright (C) 2017-2022 Osimis S.A., Belgium - * Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium + * Copyright (C) 2017-2023 Osimis S.A., Belgium + * Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium * * This program is free software: you can redistribute it and/or * modify it under the terms of the GNU General Public License as
--- a/Resources/Orthanc/Plugins/OrthancPluginsExports.cmake Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/Plugins/OrthancPluginsExports.cmake Tue Nov 14 09:34:30 2023 +0100 @@ -1,8 +1,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU General Public License as
--- a/Resources/Orthanc/Toolchains/LinuxStandardBaseToolchain.cmake Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/Toolchains/LinuxStandardBaseToolchain.cmake Tue Nov 14 09:34:30 2023 +0100 @@ -1,8 +1,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License @@ -22,11 +22,11 @@ # # Full build, as used on the BuildBot CIS: # -# $ LSB_CC=gcc-4.8 LSB_CXX=g++-4.8 cmake ../OrthancServer/ -DCMAKE_BUILD_TYPE=Debug -DCMAKE_TOOLCHAIN_FILE=../OrthancFramework/Resources/Toolchains/LinuxStandardBaseToolchain.cmake -DUSE_LEGACY_JSONCPP=ON -DUSE_LEGACY_LIBICU=ON -DBOOST_LOCALE_BACKEND=icu -DENABLE_PKCS11=ON -G Ninja +# $ LSB_CC=gcc-4.8 LSB_CXX=g++-4.8 cmake ../OrthancServer/ -DCMAKE_BUILD_TYPE=Debug -DCMAKE_TOOLCHAIN_FILE=../OrthancFramework/Resources/Toolchains/LinuxStandardBaseToolchain.cmake -DUSE_LEGACY_JSONCPP=ON -DUSE_LEGACY_LIBICU=ON -DUSE_LEGACY_BOOST=ON -DBOOST_LOCALE_BACKEND=icu -DENABLE_PKCS11=ON -G Ninja # # Or, more lightweight version (without libp11 and ICU): # -# $ LSB_CC=gcc-4.8 LSB_CXX=g++-4.8 cmake ../OrthancServer/ -DCMAKE_BUILD_TYPE=Debug -DCMAKE_TOOLCHAIN_FILE=../OrthancFramework/Resources/Toolchains/LinuxStandardBaseToolchain.cmake -DUSE_LEGACY_JSONCPP=ON -G Ninja +# $ LSB_CC=gcc-4.8 LSB_CXX=g++-4.8 cmake ../OrthancServer/ -DCMAKE_BUILD_TYPE=Debug -DCMAKE_TOOLCHAIN_FILE=../OrthancFramework/Resources/Toolchains/LinuxStandardBaseToolchain.cmake -DUSE_LEGACY_JSONCPP=ON -DUSE_LEGACY_BOOST=ON -G Ninja # INCLUDE(CMakeForceCompiler)
--- a/Resources/Orthanc/Toolchains/MinGW-W64-Toolchain32.cmake Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/Toolchains/MinGW-W64-Toolchain32.cmake Tue Nov 14 09:34:30 2023 +0100 @@ -1,8 +1,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License
--- a/Resources/Orthanc/Toolchains/MinGW-W64-Toolchain64.cmake Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/Toolchains/MinGW-W64-Toolchain64.cmake Tue Nov 14 09:34:30 2023 +0100 @@ -1,8 +1,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License
--- a/Resources/Orthanc/Toolchains/MinGWToolchain.cmake Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/Orthanc/Toolchains/MinGWToolchain.cmake Tue Nov 14 09:34:30 2023 +0100 @@ -1,8 +1,8 @@ # Orthanc - A Lightweight, RESTful DICOM Store # Copyright (C) 2012-2016 Sebastien Jodogne, Medical Physics # Department, University Hospital of Liege, Belgium -# Copyright (C) 2017-2022 Osimis S.A., Belgium -# Copyright (C) 2021-2022 Sebastien Jodogne, ICTEAM UCLouvain, Belgium +# Copyright (C) 2017-2023 Osimis S.A., Belgium +# Copyright (C) 2021-2023 Sebastien Jodogne, ICTEAM UCLouvain, Belgium # # This program is free software: you can redistribute it and/or # modify it under the terms of the GNU Lesser General Public License
--- a/Resources/SyncOrthancFolder.py Mon Aug 14 10:27:52 2023 +0200 +++ b/Resources/SyncOrthancFolder.py Tue Nov 14 09:34:30 2023 +0100 @@ -8,11 +8,11 @@ import multiprocessing import os import stat -import urllib2 +import urllib.request TARGET = os.path.join(os.path.dirname(__file__), 'Orthanc') PLUGIN_SDK_VERSION = '1.10.1' -REPOSITORY = 'https://hg.orthanc-server.com/orthanc/raw-file' +REPOSITORY = 'https://orthanc.uclouvain.be/hg/orthanc/raw-file' FILES = [ ('OrthancFramework/Resources/CMake/AutoGeneratedCode.cmake', 'CMake'), @@ -44,7 +44,7 @@ branch = x[0] source = x[1] target = os.path.join(TARGET, x[2]) - print target + print(target) try: os.makedirs(os.path.dirname(target)) @@ -53,8 +53,12 @@ url = '%s/%s/%s' % (REPOSITORY, branch, source) - with open(target, 'w') as f: - f.write(urllib2.urlopen(url).read()) + with open(target, 'wb') as f: + try: + f.write(urllib.request.urlopen(url).read()) + except: + print('ERROR: %s' % url) + raise commands = []